AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0638610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638610 MtrunA17_Chr4g0049981 98.894 1266 14 0 1 1266 1 1266 0.0 2573
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638610 AT5G37830.1 81.260 1270 230 2 1 1266 1 1266 0.0 2157

Find 325 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCCTTATGCTGCGGTTTA+TGG 0.137030 4_3:+34135141 Msa0638610:CDS
ATTTCAGTCAACTGCCTTAT+TGG 0.141151 4_3:-34134946 None:intergenic
GCTAAGCCCCTCTTCAAATT+TGG 0.165612 4_3:-34134305 None:intergenic
TGTTGTATTTACTGCATTTC+AGG 0.182602 4_3:+34136811 Msa0638610:CDS
TCCAATATGGACTTTGAAAA+TGG 0.184985 4_3:-34136137 None:intergenic
TTATAGTAGCCTTCAATTAT+AGG 0.193665 4_3:-34135501 None:intergenic
GTGCAGAAGTTTATGGTAAT+TGG 0.196069 4_3:+34136597 Msa0638610:CDS
GCTTCTTCGCCAATTGTTAA+AGG 0.201288 4_3:+34133986 Msa0638610:CDS
GCCATTGATTGGATTTGATA+TGG 0.207754 4_3:+34134468 Msa0638610:CDS
GATTATTTCCCATCCATATT+TGG 0.208240 4_3:+34134754 Msa0638610:CDS
GATGATGATGCTTAAATTAT+TGG 0.213450 4_3:-34133154 None:intergenic
GAATTATGGCACCAGCAATT+TGG 0.224339 4_3:-34134549 None:intergenic
CCAATTGTTAAAGGTATTTC+GGG 0.228167 4_3:+34133995 Msa0638610:CDS
GTTTCCATATTTGGTTATAA+TGG 0.234888 4_3:-34135658 None:intergenic
GCCAATTGTTAAAGGTATTT+CGG 0.235388 4_3:+34133994 Msa0638610:CDS
GAAAGAATGCTGACGGTAAC+TGG 0.235550 4_3:-34137112 None:intergenic
AACAAGCTTAAACGCCTTAA+TGG 0.241080 4_3:-34136171 None:intergenic
AGTGTAAGGTTTCTTTCTTT+TGG 0.250515 4_3:+34137315 Msa0638610:exon
GCTGCAGCTGTTACGGCTTC+TGG 0.264309 4_3:-34136626 None:intergenic
GGGTGTGCTCCAACTGATTC+TGG 0.269138 4_3:-34134655 None:intergenic
CATGCACTTGCTTGCTTTGG+AGG 0.272406 4_3:+34134991 Msa0638610:CDS
GACAAGTAGTCTTTAATAAC+TGG 0.273690 4_3:-34134271 None:intergenic
TTCGTTGGCAACTCAATTAC+TGG 0.276459 4_3:+34135937 Msa0638610:CDS
GTCCTCATTTGGGCCAAATA+TGG 0.286234 4_3:-34134767 None:intergenic
ACATTTGGAGATGACACTTT+TGG 0.286864 4_3:+34136869 Msa0638610:CDS
GGTTATAATGGCTCTACAAT+TGG 0.294357 4_3:-34135646 None:intergenic
AATTCTGTTGAGGTGCTTCC+TGG 0.296997 4_3:+34137244 Msa0638610:CDS
CTTGCTTGCTTTGGAGGTGC+TGG 0.298763 4_3:+34134997 Msa0638610:CDS
AGAGCCATTATAACCAAATA+TGG 0.302708 4_3:+34135654 Msa0638610:CDS
GCGTTTAAGCTTGTTGAAAA+AGG 0.303112 4_3:+34136179 Msa0638610:CDS
GGCAGCTCCTTCCTCCAATA+TGG 0.308794 4_3:-34136150 None:intergenic
GGAAGGGATACGGAGGATTC+TGG 0.316368 4_3:+34133670 Msa0638610:CDS
TTTGAATGAAGGAGATGTTT+TGG 0.321268 4_3:+34135968 Msa0638610:CDS
TTACCGTTCATGACGATTGC+TGG 0.323580 4_3:-34135603 None:intergenic
GGAGAAAGAAATGAGCCTTC+TGG 0.329113 4_3:-34136731 None:intergenic
GAAAATGGAGGCATGCTTCC+AGG 0.332136 4_3:-34136122 None:intergenic
TCAAGAGGCTGGTCCTCATT+TGG 0.333478 4_3:-34134778 None:intergenic
AATCATGCACTTGCTTGCTT+TGG 0.334399 4_3:+34134988 Msa0638610:CDS
AATTATGGCACCAGCAATTT+GGG 0.334837 4_3:-34134548 None:intergenic
AGAGGCCATCATGCAGAGAT+AGG 0.336023 4_3:+34136089 Msa0638610:CDS
GGGACAAGTGCAGAAGTTTA+TGG 0.337450 4_3:+34136590 Msa0638610:CDS
TGTATGAATAATCTTACATT+TGG 0.338339 4_3:+34136854 Msa0638610:CDS
AGCTTGTTTCAGCAGGAGTA+TGG 0.341439 4_3:+34135372 Msa0638610:CDS
GGCCCTGCTGGTGGAGTTGT+TGG 0.344548 4_3:+34134409 Msa0638610:CDS
CCAGTGATTCTGCACAGATT+TGG 0.347200 4_3:+34137013 Msa0638610:CDS
GAAACAGAAAAGCCATTGAT+TGG 0.347411 4_3:+34134457 Msa0638610:CDS
GAAGAATTTGAGAAGCTTGC+TGG 0.352120 4_3:+34134817 Msa0638610:CDS
CCTTAATTTGCGCATGATAC+AGG 0.355863 4_3:+34137507 Msa0638610:three_prime_UTR
ACAGATGCCAATCTTGTTCT+CGG 0.358530 4_3:+34134718 Msa0638610:CDS
AGAGAGAGTTGAACTTGTTC+AGG 0.365487 4_3:+34133937 Msa0638610:CDS
GAGGTGGTGATGGGCTTGTC+AGG 0.366399 4_3:+34137071 Msa0638610:CDS
TCCTCTCAATCAAGGCTGTT+TGG 0.366985 4_3:+34136688 Msa0638610:CDS
TATAATTGAAGGCTACTATA+AGG 0.368534 4_3:+34135503 Msa0638610:CDS
GGCTTGTGGTCTCAATATAT+TGG 0.373119 4_3:-34135457 None:intergenic
ATGATGATGCTTAAATTATT+GGG 0.374262 4_3:-34133153 None:intergenic
ACTCCCAGAGGCAGGTTCTA+TGG 0.376389 4_3:-34135478 None:intergenic
CTGGAGCTTATTGAACAATA+TGG 0.378331 4_3:+34136353 Msa0638610:CDS
AAATCACAATATTTCTGTTC+TGG 0.382104 4_3:-34135404 None:intergenic
TTACTGCATTCGCTGTTTAG+TGG 0.384236 4_3:+34136655 Msa0638610:CDS
TATAAGGTTTACTTTGGAAA+TGG 0.385748 4_3:+34135519 Msa0638610:CDS
TTGTCATAAGTGTGCTGTTA+TGG 0.390730 4_3:+34137387 Msa0638610:three_prime_UTR
GATAAGCGAAAGGTTTATCT+TGG 0.393132 4_3:+34137214 Msa0638610:CDS
TACTAGACATTGCTCCTAGA+TGG 0.396011 4_3:-34135911 None:intergenic
CTGGTAATATAAATGCTTAT+CGG 0.397675 4_3:+34134836 Msa0638610:CDS
CAAGAGGCTGGTCCTCATTT+GGG 0.398768 4_3:-34134777 None:intergenic
TTCAACGCTTCTTCATTAAG+AGG 0.400280 4_3:-34134040 None:intergenic
CCCGAAATACCTTTAACAAT+TGG 0.400832 4_3:-34133995 None:intergenic
GTTATTAAAGACTACTTGTC+AGG 0.405088 4_3:+34134274 Msa0638610:CDS
AGACAATGTGTCGTCCAATA+AGG 0.405869 4_3:+34134932 Msa0638610:CDS
TATCTTTGTTCAAATATCTC+TGG 0.407146 4_3:-34136989 None:intergenic
GTTATAATGGCTCTACAATT+GGG 0.408132 4_3:-34135645 None:intergenic
CTGAGAAGATCGAGTGGATA+AGG 0.410590 4_3:+34133738 Msa0638610:CDS
GGAGGAAGGAGCTGCCATTA+AGG 0.412462 4_3:+34136157 Msa0638610:CDS
GGCTACTATAAGGTTTACTT+TGG 0.413293 4_3:+34135513 Msa0638610:CDS
GGAGAGGTTAGCTTTGAGTC+TGG 0.419943 4_3:+34134156 Msa0638610:CDS
AATATGGATGGGAAATAATC+AGG 0.422047 4_3:-34134751 None:intergenic
TTCCACGGTCATCGGAGCTT+GGG 0.422905 4_3:-34136241 None:intergenic
AAATAAAACAGCTTCATGTT+TGG 0.423094 4_3:+34137349 Msa0638610:three_prime_UTR
GCAATTCTGTCTGGCCCTGC+TGG 0.425209 4_3:+34134397 Msa0638610:CDS
GGATGGGGCTCTCCAGTGTA+AGG 0.427006 4_3:+34137301 Msa0638610:CDS
AAGCTGAGGTGCTTGAATTA+TGG 0.427501 4_3:-34134563 None:intergenic
CAACTTGAAAAGCACCGAAC+TGG 0.428297 4_3:-34134630 None:intergenic
TGCGCCAGAGAGTACCTTCT+CGG 0.429400 4_3:+34134366 Msa0638610:CDS
AATGACAGCTGCAGCTGTTA+CGG 0.430567 4_3:-34136633 None:intergenic
GTGCTCTATTTGATCCTCAC+GGG 0.431045 4_3:+34135856 Msa0638610:CDS
CCTGTATCATGCGCAAATTA+AGG 0.431261 4_3:-34137507 None:intergenic
GAGAGGTTAGCTTTGAGTCT+GGG 0.434107 4_3:+34134157 Msa0638610:CDS
AAATGCTTATCGGAAGAATC+AGG 0.436725 4_3:+34134846 Msa0638610:CDS
TCTCTATAAGCTTGAAAAGC+TGG 0.438165 4_3:+34135557 Msa0638610:CDS
CAGGCTTGTGCTTGTTCGCA+AGG 0.438311 4_3:+34136830 Msa0638610:CDS
ATTGGAGGTGGAAGTGGGGC+TGG 0.439024 4_3:+34136905 Msa0638610:CDS
CCAAATCTGTGCAGAATCAC+TGG 0.440423 4_3:-34137013 None:intergenic
TTTCGATAACATACCGGACC+TGG 0.445254 4_3:-34134676 None:intergenic
CCATTGATTGGATTTGATAT+GGG 0.445828 4_3:+34134469 Msa0638610:CDS
AAATCCCGGGCCATCGGAAT+GGG 0.449816 4_3:+34133594 Msa0638610:CDS
ATTTGTGATGTTAGAGTTCG+TGG 0.451405 4_3:+34135423 Msa0638610:CDS
GTTCCATAAACCGCAGCATA+AGG 0.453381 4_3:-34135144 None:intergenic
GCGCCAGAGAGTACCTTCTC+GGG 0.453858 4_3:+34134367 Msa0638610:CDS
GAAACCATTGGAGGTGGAAG+TGG 0.456245 4_3:+34136899 Msa0638610:CDS
CTCTATAAGCTTGAAAAGCT+GGG 0.456645 4_3:+34135558 Msa0638610:CDS
TTGTCAGGGAAATAGAGTTT+AGG 0.457091 4_3:+34137086 Msa0638610:CDS
CTCTGTGACAATTGAAGAAG+AGG 0.458384 4_3:+34136487 Msa0638610:CDS
CGTGAGGTGCATTTGCAACT+AGG 0.458939 4_3:-34135881 None:intergenic
AGTGATAGTGCAGCTGTAGT+AGG 0.459852 4_3:+34136755 Msa0638610:CDS
GTGCTGGAAACCCAAATTGC+TGG 0.465569 4_3:+34134538 Msa0638610:CDS
GACATAACCGAGAACAAGAT+TGG 0.466015 4_3:-34134725 None:intergenic
GACATAAACACTGTGGCTGC+TGG 0.467039 4_3:+34134586 Msa0638610:CDS
AGAGATTGCACTTGGCTTTG+TGG 0.468839 4_3:+34134897 Msa0638610:CDS
AGGATTCTGGAAGAGTTTAC+CGG 0.468997 4_3:+34133683 Msa0638610:CDS
GCTATGAATATTCTCCTTCA+AGG 0.469392 4_3:+34137529 Msa0638610:three_prime_UTR
GTTCCACGGTCATCGGAGCT+TGG 0.470281 4_3:-34136242 None:intergenic
GTTTGTGAGCTTGTTTCAGC+AGG 0.470544 4_3:+34135365 Msa0638610:CDS
AAGCTTGAAAAGCTGGGGTA+TGG 0.470631 4_3:+34135564 Msa0638610:CDS
GGTGTAACAACAGTTATATC+AGG 0.473194 4_3:-34136026 None:intergenic
AAGCGCTTATGGAATGGGAT+TGG 0.475287 4_3:+34135095 Msa0638610:CDS
GTGCATGATTCTTTGTCTCA+TGG 0.477254 4_3:-34134975 None:intergenic
GGGTATGGACATACGATGTC+TGG 0.477657 4_3:+34135579 Msa0638610:CDS
CTTGTTGACTTGACATCAAG+AGG 0.478863 4_3:-34134793 None:intergenic
TTATCCTCAGCATGAACAAC+AGG 0.479218 4_3:+34134132 Msa0638610:CDS
TTTCGTGATTTGCTTCAGAT+TGG 0.479339 4_3:+34133836 Msa0638610:CDS
ATCATCTGCTTTGTCTCCCA+TGG 0.479739 4_3:+34134198 Msa0638610:CDS
TGTGCTCTATTTGATCCTCA+CGG 0.480580 4_3:+34135855 Msa0638610:CDS
GAAGTGGGGCTGGTCCTACA+TGG 0.480601 4_3:+34136915 Msa0638610:CDS
CAATCAAGGCTGTTTGGCTC+CGG 0.480823 4_3:+34136694 Msa0638610:CDS
CAAGTTGGACCAGAATCAGT+TGG 0.483970 4_3:+34134646 Msa0638610:CDS
CAAATATACTCGGACGAGCC+TGG 0.483979 4_3:-34133862 None:intergenic
TATTTAAACTTGAGATATGA+AGG 0.484417 4_3:+34135273 Msa0638610:CDS
ACTATCCCATTCCGATGGCC+CGG 0.487281 4_3:-34133599 None:intergenic
GATGTTAGAGTTCGTGGTAC+AGG 0.487747 4_3:+34135429 Msa0638610:CDS
TTTGGGTACTATGAAACCAT+TGG 0.487807 4_3:+34136887 Msa0638610:CDS
TGTGCTATAGCCAGGTCTCT+AGG 0.488977 4_3:+34135033 Msa0638610:CDS
TTCTAGAGCGTAAGGGAGAA+AGG 0.489520 4_3:+34133789 Msa0638610:CDS
AAGGCAGTTGACTGAAATGA+AGG 0.490413 4_3:+34134951 Msa0638610:CDS
TTCCCTCCCTTCAGCCCTCT+AGG 0.492741 4_3:-34137154 None:intergenic
AAGCGAAAGGTTTATCTTGG+TGG 0.493349 4_3:+34137217 Msa0638610:CDS
AAGAGGAATTTGTCTAGTCC+TGG 0.495664 4_3:+34136334 Msa0638610:CDS
ATTCTGTCTGGCCCTGCTGG+TGG 0.498150 4_3:+34134400 Msa0638610:CDS
ATTATAGGACTCCCAGAGGC+AGG 0.498589 4_3:-34135486 None:intergenic
TGATGTTTATGCTGAAATCC+CGG 0.498742 4_3:+34133580 Msa0638610:CDS
CCCATATCAAATCCAATCAA+TGG 0.501185 4_3:-34134469 None:intergenic
TGGAACGACAATTTGAATGA+AGG 0.501354 4_3:+34135957 Msa0638610:CDS
AACATGCTTGTGCTATAGCC+AGG 0.502568 4_3:+34135025 Msa0638610:CDS
CTTGTGCTTGCAAATCAGAT+AGG 0.503391 4_3:-34136298 None:intergenic
GTTGATATTCCTCTCAATCA+AGG 0.503412 4_3:+34136680 Msa0638610:CDS
GAGGCCATCATGCAGAGATA+GGG 0.504769 4_3:+34136090 Msa0638610:CDS
AATCTTAGTTCCACGGTCAT+CGG 0.504968 4_3:-34136249 None:intergenic
ACACTGCCATCATGGTCAAA+AGG 0.505366 4_3:+34135301 Msa0638610:CDS
TTTGCTTCAGATTGGTAACC+AGG 0.505515 4_3:+34133844 Msa0638610:CDS
TTCATTTCCAAATTTGAAGA+GGG 0.505645 4_3:+34134298 Msa0638610:CDS
TCATTCTTGTATTTGTCATG+TGG 0.505719 4_3:-34136961 None:intergenic
TTGACTTGACATCAAGAGGC+TGG 0.505867 4_3:-34134789 None:intergenic
GGATTTCACAGAGGTGGTGA+TGG 0.506041 4_3:+34137061 Msa0638610:CDS
AACACTGTGGCTGCTGGAGG+TGG 0.506217 4_3:+34134592 Msa0638610:CDS
GACATTGCTCCTAGATGGAC+AGG 0.506372 4_3:-34135906 None:intergenic
ACAAAGTCAAGGATTTAAAG+AGG 0.508942 4_3:+34135230 Msa0638610:CDS
GGGCACAAAGCAATTCTGTC+TGG 0.509203 4_3:+34134388 Msa0638610:CDS
GAAATCCCGGGCCATCGGAA+TGG 0.511415 4_3:+34133593 Msa0638610:CDS
CGGTGATTCTCTGAGATGTA+AGG 0.512758 4_3:-34136787 None:intergenic
CCTCACGTTCCTGTCCATCT+AGG 0.515620 4_3:+34135897 Msa0638610:CDS
CATATTGTTCAATAAGCTCC+AGG 0.516323 4_3:-34136352 None:intergenic
CAATGCGCTTCTAGAGCGTA+AGG 0.517056 4_3:+34133781 Msa0638610:CDS
TAACCAACAACTCCACCAGC+AGG 0.517791 4_3:-34134412 None:intergenic
TCAAAGTTAAAGTTCCAGTT+CGG 0.517821 4_3:+34134616 Msa0638610:CDS
TACCGTTCATGACGATTGCT+GGG 0.519074 4_3:-34135602 None:intergenic
TCTGGGAGTCCTATAATTGA+AGG 0.520534 4_3:+34135492 Msa0638610:CDS
ACGGATGTGAGTCGATATGC+TGG 0.520949 4_3:+34134502 Msa0638610:CDS
GAAGAGGACTACATGGATGA+TGG 0.522320 4_3:+34136503 Msa0638610:CDS
CAAGCCATAGAACCTGCCTC+TGG 0.522546 4_3:+34135474 Msa0638610:CDS
GTTACTAACCATCCGTCAGC+CGG 0.522818 4_3:+34135990 Msa0638610:CDS
CCTTCAGCCCTCTAGGTGCA+TGG 0.523628 4_3:-34137147 None:intergenic
AGCCCCACTTCCACCTCCAA+TGG 0.524577 4_3:-34136903 None:intergenic
AGTTGAACTTGTTCAGGCAA+AGG 0.525601 4_3:+34133943 Msa0638610:CDS
AACTCGGTAGCATAGTCAAA+TGG 0.526369 4_3:-34135345 None:intergenic
ATCCATATTTGGCCCAAATG+AGG 0.527067 4_3:+34134765 Msa0638610:CDS
TACTATGAAACCATTGGAGG+TGG 0.528174 4_3:+34136893 Msa0638610:CDS
GCTTATTGAACAATATGGAC+TGG 0.528703 4_3:+34136358 Msa0638610:CDS
AATTGAAGAAGAGGACTACA+TGG 0.529608 4_3:+34136496 Msa0638610:CDS
ACCTCTTCATAAAGATTCGA+AGG 0.529988 4_3:-34133902 None:intergenic
AGTTGGAGCACACCCAGGTC+CGG 0.531279 4_3:+34134663 Msa0638610:CDS
GGTCCGGTATGTTATCGAAA+AGG 0.531315 4_3:+34134679 Msa0638610:CDS
CACCTAGAGGGCTGAAGGGA+GGG 0.534280 4_3:+34137152 Msa0638610:CDS
ATGCTGAAATCCCGGGCCAT+CGG 0.536893 4_3:+34133588 Msa0638610:CDS
AAGCAGAAGTTACAAAGTCA+AGG 0.538124 4_3:+34135219 Msa0638610:CDS
AGGCACAGACACTGCCATCA+TGG 0.538294 4_3:+34135293 Msa0638610:CDS
TTGGACTTAGAACGAACAGC+GGG 0.538396 4_3:+34137032 Msa0638610:CDS
GATTTCACAGAGGTGGTGAT+GGG 0.538603 4_3:+34137062 Msa0638610:CDS
GAAGATCGAGTGGATAAGGA+TGG 0.539173 4_3:+34133742 Msa0638610:CDS
ATGCACCGGTGGAAGGGATA+CGG 0.539409 4_3:+34133660 Msa0638610:CDS
CGAGGAACAGCACGAACCAT+GGG 0.540481 4_3:-34134214 None:intergenic
CTATCCCATTCCGATGGCCC+GGG 0.540543 4_3:-34133598 None:intergenic
GCCTTCGAATCTTTATGAAG+AGG 0.540919 4_3:+34133901 Msa0638610:CDS
CCATGCACCTAGAGGGCTGA+AGG 0.540944 4_3:+34137147 Msa0638610:CDS
TTACTTTGGAAATGGTTGGC+AGG 0.541377 4_3:+34135527 Msa0638610:CDS
TCATTTGGGCCAAATATGGA+TGG 0.541667 4_3:-34134763 None:intergenic
GGCTACCTCCGGCTGACGGA+TGG 0.542999 4_3:-34135998 None:intergenic
TTCAGCATAAACATCAGTAA+AGG 0.544485 4_3:-34133573 None:intergenic
AAAGGTGTCTTTCAGGAAGA+GGG 0.544537 4_3:+34136197 Msa0638610:CDS
CCACTGGTCCCTTCCCATGT+AGG 0.545880 4_3:-34136929 None:intergenic
CAACAGTTATATCAGGAAGA+TGG 0.546898 4_3:-34136019 None:intergenic
AAAAGGTGTCTTTCAGGAAG+AGG 0.548287 4_3:+34136196 Msa0638610:CDS
ATCAGGAAGATGGCTACCTC+CGG 0.549418 4_3:-34136009 None:intergenic
AAAATCTGAAGAATTTCGCC+AGG 0.550546 4_3:-34137262 None:intergenic
GGGTACTATGAAACCATTGG+AGG 0.551228 4_3:+34136890 Msa0638610:CDS
AAATGTTGTAGAAGAAGTGC+AGG 0.552707 4_3:+34135119 Msa0638610:CDS
TCAAAGTCCATATTGGAGGA+AGG 0.552749 4_3:+34136143 Msa0638610:CDS
GCCAAACAGCCTTGATTGAG+AGG 0.553303 4_3:-34136689 None:intergenic
ACGAGGAACAGCACGAACCA+TGG 0.553745 4_3:-34134215 None:intergenic
TATGGGTATAGCCGAGCAGA+TGG 0.554245 4_3:+34135773 Msa0638610:CDS
TGGAACTGAATCTACTCTTG+AGG 0.555609 4_3:+34135161 Msa0638610:CDS
CAAAGTCCTTCCCATCTGCT+CGG 0.555901 4_3:-34135784 None:intergenic
GGGCTGGTCCTACATGGGAA+GGG 0.556224 4_3:+34136921 Msa0638610:CDS
TGCCCCGAGAAGGTACTCTC+TGG 0.557665 4_3:-34134370 None:intergenic
CTTACGCTCTAGAAGCGCAT+TGG 0.558424 4_3:-34133780 None:intergenic
AGGTTTACTTTGGAAATGGT+TGG 0.559740 4_3:+34135523 Msa0638610:CDS
CTGAGCATTGACTCTAACAA+AGG 0.560006 4_3:+34136545 Msa0638610:CDS
TCCACCTGTTGTTCATGCTG+AGG 0.560655 4_3:-34134136 None:intergenic
AATTGCTTTGTGCCCCGAGA+AGG 0.562467 4_3:-34134380 None:intergenic
TTATGAAGAGGTTGTTGAGG+TGG 0.562789 4_3:+34133913 Msa0638610:CDS
AGGTGCATGGACACGTCTCT+CGG 0.564718 4_3:-34137134 None:intergenic
TGCTCTATTTGATCCTCACG+GGG 0.565307 4_3:+34135857 Msa0638610:CDS
AAACCATTGGAGGTGGAAGT+GGG 0.565646 4_3:+34136900 Msa0638610:CDS
TATGACGATGCACCGGTGGA+AGG 0.566956 4_3:+34133653 Msa0638610:CDS
GGGGCTGGTCCTACATGGGA+AGG 0.568443 4_3:+34136920 Msa0638610:CDS
CTACATGGGAAGGGACCAGT+GGG 0.568834 4_3:+34136930 Msa0638610:CDS
TTTCGACAAATATCAAAGAA+CGG 0.571010 4_3:+34135820 Msa0638610:CDS
ACAAGTAGTCTTTAATAACT+GGG 0.572251 4_3:-34134270 None:intergenic
ATGACGATGCACCGGTGGAA+GGG 0.572483 4_3:+34133654 Msa0638610:CDS
ATCCTCCGTATCCCTTCCAC+CGG 0.572721 4_3:-34133665 None:intergenic
TTATCGAAAAGGTGGAGAGT+TGG 0.573316 4_3:+34134690 Msa0638610:CDS
AGAGAGATGCTGAAGTCAGT+TGG 0.574222 4_3:+34136434 Msa0638610:CDS
GACCGTGGAACTAAGATTCG+AGG 0.574552 4_3:+34136254 Msa0638610:CDS
CTGAAACAAGCTCACAAACT+CGG 0.575242 4_3:-34135361 None:intergenic
GAGGCAGGTTCTATGGCTTG+TGG 0.576679 4_3:-34135471 None:intergenic
TTCGATAACATACCGGACCT+GGG 0.579479 4_3:-34134675 None:intergenic
TCTTTATGAAGAGGTTGTTG+AGG 0.579619 4_3:+34133910 Msa0638610:CDS
GATGTTTATGCTGAAATCCC+GGG 0.582630 4_3:+34133581 Msa0638610:CDS
AGGCCATCATGCAGAGATAG+GGG 0.585050 4_3:+34136091 Msa0638610:CDS
ATTCATTTCCAAATTTGAAG+AGG 0.585876 4_3:+34134297 Msa0638610:CDS
AAAGAATGCTGACGGTAACT+GGG 0.588860 4_3:-34137111 None:intergenic
TCCTCAGCATGAACAACAGG+TGG 0.592506 4_3:+34134135 Msa0638610:CDS
AAGCCATAGAACCTGCCTCT+GGG 0.594140 4_3:+34135475 Msa0638610:CDS
TTGATTGGATTTGATATGGG+AGG 0.595299 4_3:+34134472 Msa0638610:CDS
CCTACATGGGAAGGGACCAG+TGG 0.595461 4_3:+34136929 Msa0638610:CDS
ACGGTCGAAGAGATTGCACT+TGG 0.597036 4_3:+34134889 Msa0638610:CDS
CTAAGATTCGAGGAACTCGC+AGG 0.598988 4_3:+34136264 Msa0638610:CDS
CCGGTATGTTATCGAAAAGG+TGG 0.601821 4_3:+34134682 Msa0638610:CDS
AGATGGCTACCTCCGGCTGA+CGG 0.602035 4_3:-34136002 None:intergenic
AAGTGGGGCTGGTCCTACAT+GGG 0.602084 4_3:+34136916 Msa0638610:CDS
TCATTTCCAAATTTGAAGAG+GGG 0.604683 4_3:+34134299 Msa0638610:CDS
TTCCTCGAATCTTAGTTCCA+CGG 0.604797 4_3:-34136256 None:intergenic
GTGAAGATTCATATTCCAGA+AGG 0.608129 4_3:+34136716 Msa0638610:CDS
GGGCTGAAGGGAGGGAACGA+CGG 0.608888 4_3:+34137160 Msa0638610:CDS
TCGTGGTCTAACAGCTAGTG+TGG 0.608912 4_3:+34134234 Msa0638610:CDS
TTGTTTATGCAATCAGATGG+AGG 0.609273 4_3:+34134340 Msa0638610:CDS
TCTGGAATATGAATCTTCAC+CGG 0.609366 4_3:-34136713 None:intergenic
AGCATGAACAACAGGTGGAG+AGG 0.609686 4_3:+34134140 Msa0638610:CDS
TTCTTTCATACCTAGAGACC+TGG 0.610605 4_3:-34135043 None:intergenic
CGCCAGAGAGTACCTTCTCG+GGG 0.610608 4_3:+34134368 Msa0638610:CDS
CATGTGGCACTGTACCCCAC+TGG 0.611948 4_3:-34136945 None:intergenic
CAAGTAGCAGCAAATCAAAG+AGG 0.612527 4_3:+34136317 Msa0638610:CDS
GATAGTGCAGCTGTAGTAGG+AGG 0.613944 4_3:+34136758 Msa0638610:CDS
TCTAAAGAAAGATAAGCGAA+AGG 0.615035 4_3:+34137204 Msa0638610:CDS
AGCATATCGACTCACATCCG+TGG 0.615640 4_3:-34134500 None:intergenic
CATTTGGGCCAAATATGGAT+GGG 0.617702 4_3:-34134762 None:intergenic
CATGCACCTAGAGGGCTGAA+GGG 0.618479 4_3:+34137148 Msa0638610:CDS
AAAAGAAAGAAACCTTACAC+TGG 0.619401 4_3:-34137313 None:intergenic
GGAGGGAACGACGGTGCACG+TGG 0.619913 4_3:+34137169 Msa0638610:CDS
GGCCCAGCAATCGTCATGAA+CGG 0.621020 4_3:+34135600 Msa0638610:CDS
CAATGTCTAGTACAGTTCGT+TGG 0.622161 4_3:+34135922 Msa0638610:CDS
GCACCTAGAGGGCTGAAGGG+AGG 0.625206 4_3:+34137151 Msa0638610:CDS
TACGTACAGATGAATGCAGA+AGG 0.626574 4_3:+34136404 Msa0638610:CDS
GGTGCATCGTCATAGTTCAA+AGG 0.627398 4_3:-34133644 None:intergenic
AAGATCGAGTGGATAAGGAT+GGG 0.630644 4_3:+34133743 Msa0638610:CDS
TTTGAACTATGACGATGCAC+CGG 0.631396 4_3:+34133646 Msa0638610:CDS
ATGGTTCGTGCTGTTCCTCG+TGG 0.632048 4_3:+34134217 Msa0638610:CDS
AGGTGGTGATGGGCTTGTCA+GGG 0.632510 4_3:+34137072 Msa0638610:CDS
GTATCATGCGCAAATTAAGG+TGG 0.633930 4_3:-34137504 None:intergenic
AGGCAGTTGACTGAAATGAA+GGG 0.634201 4_3:+34134952 Msa0638610:CDS
GACGTGTCCATGCACCTAGA+GGG 0.637050 4_3:+34137140 Msa0638610:CDS
TCTATAAGCTTGAAAAGCTG+GGG 0.641557 4_3:+34135559 Msa0638610:CDS
GGAGATGGATTTCACAGAGG+TGG 0.641841 4_3:+34137055 Msa0638610:CDS
GCTATAGCACAAGCATGTTG+AGG 0.643988 4_3:-34135021 None:intergenic
TCCATCTGCAAAAGACATGA+CGG 0.644265 4_3:+34134870 Msa0638610:CDS
AATATGGACTTTGAAAATGG+AGG 0.644843 4_3:-34136134 None:intergenic
ATGGGTATAGCCGAGCAGAT+GGG 0.645074 4_3:+34135774 Msa0638610:CDS
GGACTTAGAACGAACAGCGG+GGG 0.645162 4_3:+34137034 Msa0638610:CDS
GTATAGCCGAGCAGATGGGA+AGG 0.646472 4_3:+34135778 Msa0638610:CDS
TACCTACTGAGAAGATCGAG+TGG 0.647007 4_3:+34133732 Msa0638610:CDS
TGGAAGTTATGAGCAAGTGC+TGG 0.647503 4_3:+34134522 Msa0638610:CDS
TGGTGGTAAGAATTCTGTTG+AGG 0.647616 4_3:+34137234 Msa0638610:CDS
AAGGTGTCTTTCAGGAAGAG+GGG 0.647947 4_3:+34136198 Msa0638610:CDS
AAATGCAGTAAATACAACAT+CGG 0.648438 4_3:-34136807 None:intergenic
ACTACAGCTGCACTATCACT+AGG 0.649872 4_3:-34136752 None:intergenic
TCAATACTATCCCATTCCGA+TGG 0.651354 4_3:-34133604 None:intergenic
GAATCAGTTGGAGCACACCC+AGG 0.651733 4_3:+34134658 Msa0638610:CDS
ATTGCTGTGTGTGTGACTAG+AGG 0.653431 4_3:+34133812 Msa0638610:CDS
GAAGGGAATTAGTTGTCTAG+CGG 0.655153 4_3:+34134087 Msa0638610:CDS
ATAAACACTGTGGCTGCTGG+AGG 0.659055 4_3:+34134589 Msa0638610:CDS
AGTGCAGGAGCCTTATGCTG+CGG 0.660386 4_3:+34135134 Msa0638610:CDS
GATAAGGATGGGTACAACTG+TGG 0.660581 4_3:+34133754 Msa0638610:CDS
AACCAACAACTCCACCAGCA+GGG 0.660602 4_3:-34134411 None:intergenic
AGACGTGTCCATGCACCTAG+AGG 0.661021 4_3:+34137139 Msa0638610:CDS
AGGATGGGGAGTGTTACTGA+AGG 0.663620 4_3:+34133518 Msa0638610:intron
ATCCACTCGATCTTCTCAGT+AGG 0.664291 4_3:-34133734 None:intergenic
AACCATTGGAGGTGGAAGTG+GGG 0.667336 4_3:+34136901 Msa0638610:CDS
GAACTATGACGATGCACCGG+TGG 0.670012 4_3:+34133649 Msa0638610:CDS
ACAGTAAGATCAAATATACT+CGG 0.674153 4_3:-34133872 None:intergenic
ACAGTGTTTATGTCAAGCTG+AGG 0.678380 4_3:-34134577 None:intergenic
TCTCTCGGAAAGAATGCTGA+CGG 0.680258 4_3:-34137119 None:intergenic
TTCCCAAGCTCCGATGACCG+TGG 0.682301 4_3:+34136239 Msa0638610:CDS
CAAGTAGTCTTTAATAACTG+GGG 0.682734 4_3:-34134269 None:intergenic
ACTAACCATCCGTCAGCCGG+AGG 0.686340 4_3:+34135993 Msa0638610:CDS
AATGCGCTTCTAGAGCGTAA+GGG 0.686495 4_3:+34133782 Msa0638610:CDS
GGCCATCATGCAGAGATAGG+GGG 0.689810 4_3:+34136092 Msa0638610:CDS
TGATATGGGAGGTACATCCA+CGG 0.690353 4_3:+34134483 Msa0638610:CDS
CCTAGATGGACAGGAACGTG+AGG 0.696615 4_3:-34135897 None:intergenic
CACCGGTGGAAGGGATACGG+AGG 0.701888 4_3:+34133663 Msa0638610:CDS
TTCAATTATAGGACTCCCAG+AGG 0.708433 4_3:-34135490 None:intergenic
TTTGGACTTAGAACGAACAG+CGG 0.711970 4_3:+34137031 Msa0638610:CDS
ACACTAGCTGTTAGACCACG+AGG 0.721601 4_3:-34134232 None:intergenic
TGGACTTAGAACGAACAGCG+GGG 0.730288 4_3:+34137033 Msa0638610:CDS
GCTCTATTTGATCCTCACGG+GGG 0.754720 4_3:+34135858 Msa0638610:CDS
GCACACTTATGACAACACAT+CGG 0.760438 4_3:-34137379 None:intergenic
TCAGCTTGACATAAACACTG+TGG 0.791196 4_3:+34134579 Msa0638610:CDS
TACATGGGAAGGGACCAGTG+GGG 0.800679 4_3:+34136931 Msa0638610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATCAATATGAAATTTT+TGG + chr4_3:34133257-34133276 Msa0638610:intron 10.0%
!! ATAAACTAAAAAATATATTG+GGG - chr4_3:34133350-34133369 None:intergenic 10.0%
!! CTATAAACTAAAAAATATAT+TGG - chr4_3:34133352-34133371 None:intergenic 10.0%
!!! TAAATGCAATTTTTGATAAT+TGG + chr4_3:34133448-34133467 Msa0638610:intron 15.0%
!!! ATGATGATGCTTAAATTATT+GGG - chr4_3:34133156-34133175 None:intergenic 20.0%
!! TAAAAAATATATTGGGGATT+CGG - chr4_3:34133344-34133363 None:intergenic 20.0%
!! TATTTAAACTTGAGATATGA+AGG + chr4_3:34135273-34135292 Msa0638610:CDS 20.0%
!!! AATTTTGATGTTTCCATATT+TGG - chr4_3:34135670-34135689 None:intergenic 20.0%
!!! TTACACCTGTTTTTTTTAAT+GGG + chr4_3:34136042-34136061 Msa0638610:CDS 20.0%
!! TGTATGAATAATCTTACATT+TGG + chr4_3:34136854-34136873 Msa0638610:CDS 20.0%
!! GATGATGATGCTTAAATTAT+TGG - chr4_3:34133157-34133176 None:intergenic 25.0%
! ACAGAGAAATGAAAATGAAT+CGG - chr4_3:34133222-34133241 None:intergenic 25.0%
! CCTATTAATGCACAATTATA+AGG - chr4_3:34133501-34133520 None:intergenic 25.0%
! CCTTATAATTGTGCATTAAT+AGG + chr4_3:34133498-34133517 Msa0638610:intron 25.0%
! ATAATTGTGCATTAATAGGA+TGG + chr4_3:34133502-34133521 Msa0638610:intron 25.0%
! TAATTGTGCATTAATAGGAT+GGG + chr4_3:34133503-34133522 Msa0638610:intron 25.0%
! ACAGTAAGATCAAATATACT+CGG - chr4_3:34133875-34133894 None:intergenic 25.0%
! ACAAGTAGTCTTTAATAACT+GGG - chr4_3:34134273-34134292 None:intergenic 25.0%
! ATTCATTTCCAAATTTGAAG+AGG + chr4_3:34134297-34134316 Msa0638610:CDS 25.0%
! TTCATTTCCAAATTTGAAGA+GGG + chr4_3:34134298-34134317 Msa0638610:CDS 25.0%
! CTGGTAATATAAATGCTTAT+CGG + chr4_3:34134836-34134855 Msa0638610:CDS 25.0%
!! TGCTTATTCACAAATTTTGT+GGG + chr4_3:34135067-34135086 Msa0638610:CDS 25.0%
!! AAATCACAATATTTCTGTTC+TGG - chr4_3:34135407-34135426 None:intergenic 25.0%
! TTATAGTAGCCTTCAATTAT+AGG - chr4_3:34135504-34135523 None:intergenic 25.0%
! TATAATTGAAGGCTACTATA+AGG + chr4_3:34135503-34135522 Msa0638610:CDS 25.0%
!! TATAAGGTTTACTTTGGAAA+TGG + chr4_3:34135519-34135538 Msa0638610:CDS 25.0%
! GTTTCCATATTTGGTTATAA+TGG - chr4_3:34135661-34135680 None:intergenic 25.0%
!! TATTTTCAATCACAGGTTTA+TGG + chr4_3:34135755-34135774 Msa0638610:CDS 25.0%
!! ATTTTCAATCACAGGTTTAT+GGG + chr4_3:34135756-34135775 Msa0638610:CDS 25.0%
! TTTCGACAAATATCAAAGAA+CGG + chr4_3:34135820-34135839 Msa0638610:CDS 25.0%
!!! GTTACACCTGTTTTTTTTAA+TGG + chr4_3:34136041-34136060 Msa0638610:CDS 25.0%
! AACTTCCCATTAAAAAAAAC+AGG - chr4_3:34136050-34136069 None:intergenic 25.0%
!!! TGTTTTTTTTAATGGGAAGT+TGG + chr4_3:34136049-34136068 Msa0638610:CDS 25.0%
!!! GTATTTTTTGTTGCAAATAG+AGG + chr4_3:34136071-34136090 Msa0638610:CDS 25.0%
!!! AAGCAATTTTTGATTTTGGT+GGG + chr4_3:34136570-34136589 Msa0638610:CDS 25.0%
! AAATGCAGTAAATACAACAT+CGG - chr4_3:34136810-34136829 None:intergenic 25.0%
! TATCTTTGTTCAAATATCTC+TGG - chr4_3:34136992-34137011 None:intergenic 25.0%
! AAATAAAACAGCTTCATGTT+TGG + chr4_3:34137349-34137368 Msa0638610:three_prime_UTR 25.0%
!! TTTGGTCTTGTTAGATTAGA+TGG + chr4_3:34133275-34133294 Msa0638610:intron 30.0%
! GCATTTAAGTTTGAGAATAG+AGG - chr4_3:34133435-34133454 None:intergenic 30.0%
AATTGTGCATTAATAGGATG+GGG + chr4_3:34133504-34133523 Msa0638610:intron 30.0%
!! TTAAGATTTTGTATCGACAG+AGG + chr4_3:34133545-34133564 Msa0638610:CDS 30.0%
TTCAGCATAAACATCAGTAA+AGG - chr4_3:34133576-34133595 None:intergenic 30.0%
!! GCCAATTGTTAAAGGTATTT+CGG + chr4_3:34133994-34134013 Msa0638610:CDS 30.0%
!! CCAATTGTTAAAGGTATTTC+GGG + chr4_3:34133995-34134014 Msa0638610:CDS 30.0%
GCTTGTACTGAAAAATTTAC+TGG + chr4_3:34134063-34134082 Msa0638610:CDS 30.0%
ACTGAAAAATTTACTGGAGA+AGG + chr4_3:34134069-34134088 Msa0638610:CDS 30.0%
CTGAAAAATTTACTGGAGAA+GGG + chr4_3:34134070-34134089 Msa0638610:CDS 30.0%
CAAGTAGTCTTTAATAACTG+GGG - chr4_3:34134272-34134291 None:intergenic 30.0%
GACAAGTAGTCTTTAATAAC+TGG - chr4_3:34134274-34134293 None:intergenic 30.0%
GTTATTAAAGACTACTTGTC+AGG + chr4_3:34134274-34134293 Msa0638610:CDS 30.0%
TCATTTCCAAATTTGAAGAG+GGG + chr4_3:34134299-34134318 Msa0638610:CDS 30.0%
!!! GTTTTGTTTATGCAATCAGA+TGG + chr4_3:34134337-34134356 Msa0638610:CDS 30.0%
! CCATTGATTGGATTTGATAT+GGG + chr4_3:34134469-34134488 Msa0638610:CDS 30.0%
TCAAAGTTAAAGTTCCAGTT+CGG + chr4_3:34134616-34134635 Msa0638610:CDS 30.0%
AATATGGATGGGAAATAATC+AGG - chr4_3:34134754-34134773 None:intergenic 30.0%
GATTATTTCCCATCCATATT+TGG + chr4_3:34134754-34134773 Msa0638610:CDS 30.0%
! GTGCTTATTCACAAATTTTG+TGG + chr4_3:34135066-34135085 Msa0638610:CDS 30.0%
! ATTTTAAGCGCTTATGGAAT+GGG + chr4_3:34135090-34135109 Msa0638610:CDS 30.0%
ACAAAGTCAAGGATTTAAAG+AGG + chr4_3:34135230-34135249 Msa0638610:CDS 30.0%
! TATTTTCCTTTTGACCATGA+TGG - chr4_3:34135310-34135329 None:intergenic 30.0%
! GTTATAATGGCTCTACAATT+GGG - chr4_3:34135648-34135667 None:intergenic 30.0%
AGAGCCATTATAACCAAATA+TGG + chr4_3:34135654-34135673 Msa0638610:CDS 30.0%
! AACTCTCTATTTTCAATCAC+AGG + chr4_3:34135748-34135767 Msa0638610:CDS 30.0%
! TTTGAATGAAGGAGATGTTT+TGG + chr4_3:34135968-34135987 Msa0638610:CDS 30.0%
! AATATGGACTTTGAAAATGG+AGG - chr4_3:34136137-34136156 None:intergenic 30.0%
! TCCATTTTCAAAGTCCATAT+TGG + chr4_3:34136136-34136155 Msa0638610:CDS 30.0%
! TCCAATATGGACTTTGAAAA+TGG - chr4_3:34136140-34136159 None:intergenic 30.0%
! ATTTTCAAAGTCCATATTGG+AGG + chr4_3:34136139-34136158 Msa0638610:CDS 30.0%
!!! GGAGAAGCAATTTTTGATTT+TGG + chr4_3:34136566-34136585 Msa0638610:CDS 30.0%
!!! GAAGCAATTTTTGATTTTGG+TGG + chr4_3:34136569-34136588 Msa0638610:CDS 30.0%
TGTTGTATTTACTGCATTTC+AGG + chr4_3:34136811-34136830 Msa0638610:CDS 30.0%
TCATTCTTGTATTTGTCATG+TGG - chr4_3:34136964-34136983 None:intergenic 30.0%
TCTAAAGAAAGATAAGCGAA+AGG + chr4_3:34137204-34137223 Msa0638610:CDS 30.0%
AAAAGAAAGAAACCTTACAC+TGG - chr4_3:34137316-34137335 None:intergenic 30.0%
! AGTGTAAGGTTTCTTTCTTT+TGG + chr4_3:34137315-34137334 Msa0638610:exon 30.0%
TGTAATGTACATGACATTGC+AGG + chr4_3:34133474-34133493 Msa0638610:intron 35.0%
GTAATGTACATGACATTGCA+GGG + chr4_3:34133475-34133494 Msa0638610:intron 35.0%
TGATGTTTATGCTGAAATCC+CGG + chr4_3:34133580-34133599 Msa0638610:CDS 35.0%
!! TTTCGTGATTTGCTTCAGAT+TGG + chr4_3:34133836-34133855 Msa0638610:CDS 35.0%
ACCTCTTCATAAAGATTCGA+AGG - chr4_3:34133905-34133924 None:intergenic 35.0%
TCTTTATGAAGAGGTTGTTG+AGG + chr4_3:34133910-34133929 Msa0638610:CDS 35.0%
CCCGAAATACCTTTAACAAT+TGG - chr4_3:34133998-34134017 None:intergenic 35.0%
TTCAACGCTTCTTCATTAAG+AGG - chr4_3:34134043-34134062 None:intergenic 35.0%
TTGTTTATGCAATCAGATGG+AGG + chr4_3:34134340-34134359 Msa0638610:CDS 35.0%
! GGTTACTCACAAACTCTTTT+TGG + chr4_3:34134430-34134449 Msa0638610:CDS 35.0%
GAAACAGAAAAGCCATTGAT+TGG + chr4_3:34134457-34134476 Msa0638610:CDS 35.0%
! GCCATTGATTGGATTTGATA+TGG + chr4_3:34134468-34134487 Msa0638610:CDS 35.0%
CCCATATCAAATCCAATCAA+TGG - chr4_3:34134472-34134491 None:intergenic 35.0%
TTGATTGGATTTGATATGGG+AGG + chr4_3:34134472-34134491 Msa0638610:CDS 35.0%
AATTATGGCACCAGCAATTT+GGG - chr4_3:34134551-34134570 None:intergenic 35.0%
AAATGCTTATCGGAAGAATC+AGG + chr4_3:34134846-34134865 Msa0638610:CDS 35.0%
ATTTCAGTCAACTGCCTTAT+TGG - chr4_3:34134949-34134968 None:intergenic 35.0%
! GATTTTAAGCGCTTATGGAA+TGG + chr4_3:34135089-34135108 Msa0638610:CDS 35.0%
! AAATGTTGTAGAAGAAGTGC+AGG + chr4_3:34135119-34135138 Msa0638610:CDS 35.0%
AAGCAGAAGTTACAAAGTCA+AGG + chr4_3:34135219-34135238 Msa0638610:CDS 35.0%
ATTTGTGATGTTAGAGTTCG+TGG + chr4_3:34135423-34135442 Msa0638610:CDS 35.0%
GGCTACTATAAGGTTTACTT+TGG + chr4_3:34135513-34135532 Msa0638610:CDS 35.0%
! AGGTTTACTTTGGAAATGGT+TGG + chr4_3:34135523-34135542 Msa0638610:CDS 35.0%
!! AGCTTTTCAAGCTTATAGAG+AGG - chr4_3:34135558-34135577 None:intergenic 35.0%
TCTCTATAAGCTTGAAAAGC+TGG + chr4_3:34135557-34135576 Msa0638610:CDS 35.0%
CTCTATAAGCTTGAAAAGCT+GGG + chr4_3:34135558-34135577 Msa0638610:CDS 35.0%
TCTATAAGCTTGAAAAGCTG+GGG + chr4_3:34135559-34135578 Msa0638610:CDS 35.0%
! GGTTATAATGGCTCTACAAT+TGG - chr4_3:34135649-34135668 None:intergenic 35.0%
!!! GATATTTTAATGCTGCTCAC+AGG - chr4_3:34135705-34135724 None:intergenic 35.0%
TGGAACGACAATTTGAATGA+AGG + chr4_3:34135957-34135976 Msa0638610:CDS 35.0%
CAACAGTTATATCAGGAAGA+TGG - chr4_3:34136022-34136041 None:intergenic 35.0%
GGTGTAACAACAGTTATATC+AGG - chr4_3:34136029-34136048 None:intergenic 35.0%
AACAAGCTTAAACGCCTTAA+TGG - chr4_3:34136174-34136193 None:intergenic 35.0%
!! GCGTTTAAGCTTGTTGAAAA+AGG + chr4_3:34136179-34136198 Msa0638610:CDS 35.0%
!! TGTTGAAAAAGGTGTCTTTC+AGG + chr4_3:34136190-34136209 Msa0638610:CDS 35.0%
CATATTGTTCAATAAGCTCC+AGG - chr4_3:34136355-34136374 None:intergenic 35.0%
CTGGAGCTTATTGAACAATA+TGG + chr4_3:34136353-34136372 Msa0638610:CDS 35.0%
GCTTATTGAACAATATGGAC+TGG + chr4_3:34136358-34136377 Msa0638610:CDS 35.0%
AATTGAAGAAGAGGACTACA+TGG + chr4_3:34136496-34136515 Msa0638610:CDS 35.0%
GTGCAGAAGTTTATGGTAAT+TGG + chr4_3:34136597-34136616 Msa0638610:CDS 35.0%
GTTGATATTCCTCTCAATCA+AGG + chr4_3:34136680-34136699 Msa0638610:CDS 35.0%
! TCTGGAATATGAATCTTCAC+CGG - chr4_3:34136716-34136735 None:intergenic 35.0%
GTGAAGATTCATATTCCAGA+AGG + chr4_3:34136716-34136735 Msa0638610:CDS 35.0%
! ACATTTGGAGATGACACTTT+TGG + chr4_3:34136869-34136888 Msa0638610:CDS 35.0%
! CATTTGGAGATGACACTTTT+GGG + chr4_3:34136870-34136889 Msa0638610:CDS 35.0%
TTTGGGTACTATGAAACCAT+TGG + chr4_3:34136887-34136906 Msa0638610:CDS 35.0%
TTGTCAGGGAAATAGAGTTT+AGG + chr4_3:34137086-34137105 Msa0638610:CDS 35.0%
GATAAGCGAAAGGTTTATCT+TGG + chr4_3:34137214-34137233 Msa0638610:CDS 35.0%
AAAATCTGAAGAATTTCGCC+AGG - chr4_3:34137265-34137284 None:intergenic 35.0%
!!! ATTCTTCAGATTTTGACTCC+TGG + chr4_3:34137271-34137290 Msa0638610:CDS 35.0%
!!! TTCTTCAGATTTTGACTCCT+GGG + chr4_3:34137272-34137291 Msa0638610:CDS 35.0%
! TTGTCATAAGTGTGCTGTTA+TGG + chr4_3:34137387-34137406 Msa0638610:three_prime_UTR 35.0%
! TATTGGGGATTCGGTTTCTT+TGG - chr4_3:34133335-34133354 None:intergenic 40.0%
!! AGATTTTGTATCGACAGAGG+CGG + chr4_3:34133548-34133567 Msa0638610:CDS 40.0%
GATGTTTATGCTGAAATCCC+GGG + chr4_3:34133581-34133600 Msa0638610:CDS 40.0%
TCAATACTATCCCATTCCGA+TGG - chr4_3:34133607-34133626 None:intergenic 40.0%
TTTGAACTATGACGATGCAC+CGG + chr4_3:34133646-34133665 Msa0638610:CDS 40.0%
! AGGATTCTGGAAGAGTTTAC+CGG + chr4_3:34133683-34133702 Msa0638610:CDS 40.0%
AAGATCGAGTGGATAAGGAT+GGG + chr4_3:34133743-34133762 Msa0638610:CDS 40.0%
! TTTGCTTCAGATTGGTAACC+AGG + chr4_3:34133844-34133863 Msa0638610:CDS 40.0%
GCCTTCGAATCTTTATGAAG+AGG + chr4_3:34133901-34133920 Msa0638610:CDS 40.0%
TTATGAAGAGGTTGTTGAGG+TGG + chr4_3:34133913-34133932 Msa0638610:CDS 40.0%
! AGAGAGAGTTGAACTTGTTC+AGG + chr4_3:34133937-34133956 Msa0638610:CDS 40.0%
! AGTTGAACTTGTTCAGGCAA+AGG + chr4_3:34133943-34133962 Msa0638610:CDS 40.0%
GCTTCTTCGCCAATTGTTAA+AGG + chr4_3:34133986-34134005 Msa0638610:CDS 40.0%
GAAGGGAATTAGTTGTCTAG+CGG + chr4_3:34134087-34134106 Msa0638610:CDS 40.0%
TTATCCTCAGCATGAACAAC+AGG + chr4_3:34134132-34134151 Msa0638610:CDS 40.0%
GAATTATGGCACCAGCAATT+TGG - chr4_3:34134552-34134571 None:intergenic 40.0%
! AAGCTGAGGTGCTTGAATTA+TGG - chr4_3:34134566-34134585 None:intergenic 40.0%
ACAGTGTTTATGTCAAGCTG+AGG - chr4_3:34134580-34134599 None:intergenic 40.0%
TCAGCTTGACATAAACACTG+TGG + chr4_3:34134579-34134598 Msa0638610:CDS 40.0%
! CCACCTTTTCGATAACATAC+CGG - chr4_3:34134685-34134704 None:intergenic 40.0%
TTATCGAAAAGGTGGAGAGT+TGG + chr4_3:34134690-34134709 Msa0638610:CDS 40.0%
ACAGATGCCAATCTTGTTCT+CGG + chr4_3:34134718-34134737 Msa0638610:CDS 40.0%
GACATAACCGAGAACAAGAT+TGG - chr4_3:34134728-34134747 None:intergenic 40.0%
CATTTGGGCCAAATATGGAT+GGG - chr4_3:34134765-34134784 None:intergenic 40.0%
TCATTTGGGCCAAATATGGA+TGG - chr4_3:34134766-34134785 None:intergenic 40.0%
ATCCATATTTGGCCCAAATG+AGG + chr4_3:34134765-34134784 Msa0638610:CDS 40.0%
!! CTTGTTGACTTGACATCAAG+AGG - chr4_3:34134796-34134815 None:intergenic 40.0%
GAAGAATTTGAGAAGCTTGC+TGG + chr4_3:34134817-34134836 Msa0638610:CDS 40.0%
TCCATCTGCAAAAGACATGA+CGG + chr4_3:34134870-34134889 Msa0638610:CDS 40.0%
AGACAATGTGTCGTCCAATA+AGG + chr4_3:34134932-34134951 Msa0638610:CDS 40.0%
AAGGCAGTTGACTGAAATGA+AGG + chr4_3:34134951-34134970 Msa0638610:CDS 40.0%
AGGCAGTTGACTGAAATGAA+GGG + chr4_3:34134952-34134971 Msa0638610:CDS 40.0%
GTGCATGATTCTTTGTCTCA+TGG - chr4_3:34134978-34134997 None:intergenic 40.0%
AATCATGCACTTGCTTGCTT+TGG + chr4_3:34134988-34135007 Msa0638610:CDS 40.0%
TTCTTTCATACCTAGAGACC+TGG - chr4_3:34135046-34135065 None:intergenic 40.0%
! TGTGGGATTTTAAGCGCTTA+TGG + chr4_3:34135084-34135103 Msa0638610:CDS 40.0%
TGGAACTGAATCTACTCTTG+AGG + chr4_3:34135161-34135180 Msa0638610:CDS 40.0%
AACTCGGTAGCATAGTCAAA+TGG - chr4_3:34135348-34135367 None:intergenic 40.0%
CTGAAACAAGCTCACAAACT+CGG - chr4_3:34135364-34135383 None:intergenic 40.0%
GGCTTGTGGTCTCAATATAT+TGG - chr4_3:34135460-34135479 None:intergenic 40.0%
TTCAATTATAGGACTCCCAG+AGG - chr4_3:34135493-34135512 None:intergenic 40.0%
TCTGGGAGTCCTATAATTGA+AGG + chr4_3:34135492-34135511 Msa0638610:CDS 40.0%
! TTACTTTGGAAATGGTTGGC+AGG + chr4_3:34135527-34135546 Msa0638610:CDS 40.0%
TGTGCTCTATTTGATCCTCA+CGG + chr4_3:34135855-34135874 Msa0638610:CDS 40.0%
TACTAGACATTGCTCCTAGA+TGG - chr4_3:34135914-34135933 None:intergenic 40.0%
CAATGTCTAGTACAGTTCGT+TGG + chr4_3:34135922-34135941 Msa0638610:CDS 40.0%
TTCGTTGGCAACTCAATTAC+TGG + chr4_3:34135937-34135956 Msa0638610:CDS 40.0%
TCAAAGTCCATATTGGAGGA+AGG + chr4_3:34136143-34136162 Msa0638610:CDS 40.0%
!! AAAAGGTGTCTTTCAGGAAG+AGG + chr4_3:34136196-34136215 Msa0638610:CDS 40.0%
!! AAAGGTGTCTTTCAGGAAGA+GGG + chr4_3:34136197-34136216 Msa0638610:CDS 40.0%
AATCTTAGTTCCACGGTCAT+CGG - chr4_3:34136252-34136271 None:intergenic 40.0%
TTCCTCGAATCTTAGTTCCA+CGG - chr4_3:34136259-34136278 None:intergenic 40.0%
CTTGTGCTTGCAAATCAGAT+AGG - chr4_3:34136301-34136320 None:intergenic 40.0%
CAAGTAGCAGCAAATCAAAG+AGG + chr4_3:34136317-34136336 Msa0638610:CDS 40.0%
AAGAGGAATTTGTCTAGTCC+TGG + chr4_3:34136334-34136353 Msa0638610:CDS 40.0%
TACGTACAGATGAATGCAGA+AGG + chr4_3:34136404-34136423 Msa0638610:CDS 40.0%
CTCTGTGACAATTGAAGAAG+AGG + chr4_3:34136487-34136506 Msa0638610:CDS 40.0%
!! CTGAGCATTGACTCTAACAA+AGG + chr4_3:34136545-34136564 Msa0638610:CDS 40.0%
TTACTGCATTCGCTGTTTAG+TGG + chr4_3:34136655-34136674 Msa0638610:CDS 40.0%
TACTATGAAACCATTGGAGG+TGG + chr4_3:34136893-34136912 Msa0638610:CDS 40.0%
TTTGGACTTAGAACGAACAG+CGG + chr4_3:34137031-34137050 Msa0638610:CDS 40.0%
AAAGAATGCTGACGGTAACT+GGG - chr4_3:34137114-34137133 None:intergenic 40.0%
AAGCGAAAGGTTTATCTTGG+TGG + chr4_3:34137217-34137236 Msa0638610:CDS 40.0%
TGGTGGTAAGAATTCTGTTG+AGG + chr4_3:34137234-34137253 Msa0638610:CDS 40.0%
!!! TCTTCAGATTTTGACTCCTG+GGG + chr4_3:34137273-34137292 Msa0638610:CDS 40.0%
GCACACTTATGACAACACAT+CGG - chr4_3:34137382-34137401 None:intergenic 40.0%
GTATCATGCGCAAATTAAGG+TGG - chr4_3:34137507-34137526 None:intergenic 40.0%
CCTGTATCATGCGCAAATTA+AGG - chr4_3:34137510-34137529 None:intergenic 40.0%
!! CCTTAATTTGCGCATGATAC+AGG + chr4_3:34137507-34137526 Msa0638610:three_prime_UTR 40.0%
! TCGGTTTCTTTGGAAACTGC+AGG - chr4_3:34133325-34133344 None:intergenic 45.0%
GGTGCATCGTCATAGTTCAA+AGG - chr4_3:34133647-34133666 None:intergenic 45.0%
!! GTAGGTATTTTCGAGCTACG+CGG - chr4_3:34133719-34133738 None:intergenic 45.0%
TACCTACTGAGAAGATCGAG+TGG + chr4_3:34133732-34133751 Msa0638610:CDS 45.0%
ATCCACTCGATCTTCTCAGT+AGG - chr4_3:34133737-34133756 None:intergenic 45.0%
CTGAGAAGATCGAGTGGATA+AGG + chr4_3:34133738-34133757 Msa0638610:CDS 45.0%
GAAGATCGAGTGGATAAGGA+TGG + chr4_3:34133742-34133761 Msa0638610:CDS 45.0%
GATAAGGATGGGTACAACTG+TGG + chr4_3:34133754-34133773 Msa0638610:CDS 45.0%
!! AATGCGCTTCTAGAGCGTAA+GGG + chr4_3:34133782-34133801 Msa0638610:CDS 45.0%
!! TTCTAGAGCGTAAGGGAGAA+AGG + chr4_3:34133789-34133808 Msa0638610:CDS 45.0%
ATTGCTGTGTGTGTGACTAG+AGG + chr4_3:34133812-34133831 Msa0638610:CDS 45.0%
!! GAGAGGTTAGCTTTGAGTCT+GGG + chr4_3:34134157-34134176 Msa0638610:CDS 45.0%
ATCATCTGCTTTGTCTCCCA+TGG + chr4_3:34134198-34134217 Msa0638610:CDS 45.0%
GCTAAGCCCCTCTTCAAATT+TGG - chr4_3:34134308-34134327 None:intergenic 45.0%
! TGATATGGGAGGTACATCCA+CGG + chr4_3:34134483-34134502 Msa0638610:CDS 45.0%
TGGAAGTTATGAGCAAGTGC+TGG + chr4_3:34134522-34134541 Msa0638610:CDS 45.0%
!! CAACTTGAAAAGCACCGAAC+TGG - chr4_3:34134633-34134652 None:intergenic 45.0%
!!! CAGTTCGGTGCTTTTCAAGT+TGG + chr4_3:34134631-34134650 Msa0638610:CDS 45.0%
! CAAGTTGGACCAGAATCAGT+TGG + chr4_3:34134646-34134665 Msa0638610:CDS 45.0%
TTCGATAACATACCGGACCT+GGG - chr4_3:34134678-34134697 None:intergenic 45.0%
TTTCGATAACATACCGGACC+TGG - chr4_3:34134679-34134698 None:intergenic 45.0%
GGTCCGGTATGTTATCGAAA+AGG + chr4_3:34134679-34134698 Msa0638610:CDS 45.0%
CCGGTATGTTATCGAAAAGG+TGG + chr4_3:34134682-34134701 Msa0638610:CDS 45.0%
GTCCTCATTTGGGCCAAATA+TGG - chr4_3:34134770-34134789 None:intergenic 45.0%
! TTGACTTGACATCAAGAGGC+TGG - chr4_3:34134792-34134811 None:intergenic 45.0%
! ACCGTCATGTCTTTTGCAGA+TGG - chr4_3:34134874-34134893 None:intergenic 45.0%
!! AGAGATTGCACTTGGCTTTG+TGG + chr4_3:34134897-34134916 Msa0638610:CDS 45.0%
GCTATAGCACAAGCATGTTG+AGG - chr4_3:34135024-34135043 None:intergenic 45.0%
AACATGCTTGTGCTATAGCC+AGG + chr4_3:34135025-34135044 Msa0638610:CDS 45.0%
AAGCGCTTATGGAATGGGAT+TGG + chr4_3:34135095-34135114 Msa0638610:CDS 45.0%
GTTCCATAAACCGCAGCATA+AGG - chr4_3:34135147-34135166 None:intergenic 45.0%
ACACTGCCATCATGGTCAAA+AGG + chr4_3:34135301-34135320 Msa0638610:CDS 45.0%
! GTTTGTGAGCTTGTTTCAGC+AGG + chr4_3:34135365-34135384 Msa0638610:CDS 45.0%
! AGCTTGTTTCAGCAGGAGTA+TGG + chr4_3:34135372-34135391 Msa0638610:CDS 45.0%
GATGTTAGAGTTCGTGGTAC+AGG + chr4_3:34135429-34135448 Msa0638610:CDS 45.0%
AAGCTTGAAAAGCTGGGGTA+TGG + chr4_3:34135564-34135583 Msa0638610:CDS 45.0%
TACCGTTCATGACGATTGCT+GGG - chr4_3:34135605-34135624 None:intergenic 45.0%
TTACCGTTCATGACGATTGC+TGG - chr4_3:34135606-34135625 None:intergenic 45.0%
GTGCTCTATTTGATCCTCAC+GGG + chr4_3:34135856-34135875 Msa0638610:CDS 45.0%
TGCTCTATTTGATCCTCACG+GGG + chr4_3:34135857-34135876 Msa0638610:CDS 45.0%
! AAGGTGTCTTTCAGGAAGAG+GGG + chr4_3:34136198-34136217 Msa0638610:CDS 45.0%
AGAGAGATGCTGAAGTCAGT+TGG + chr4_3:34136434-34136453 Msa0638610:CDS 45.0%
GAAGAGGACTACATGGATGA+TGG + chr4_3:34136503-34136522 Msa0638610:CDS 45.0%
GGGACAAGTGCAGAAGTTTA+TGG + chr4_3:34136590-34136609 Msa0638610:CDS 45.0%
AATGACAGCTGCAGCTGTTA+CGG - chr4_3:34136636-34136655 None:intergenic 45.0%
TCCTCTCAATCAAGGCTGTT+TGG + chr4_3:34136688-34136707 Msa0638610:CDS 45.0%
GGAGAAAGAAATGAGCCTTC+TGG - chr4_3:34136734-34136753 None:intergenic 45.0%
ACTACAGCTGCACTATCACT+AGG - chr4_3:34136755-34136774 None:intergenic 45.0%
! AGTGATAGTGCAGCTGTAGT+AGG + chr4_3:34136755-34136774 Msa0638610:CDS 45.0%
!! CGGTGATTCTCTGAGATGTA+AGG - chr4_3:34136790-34136809 None:intergenic 45.0%
GGGTACTATGAAACCATTGG+AGG + chr4_3:34136890-34136909 Msa0638610:CDS 45.0%
AAACCATTGGAGGTGGAAGT+GGG + chr4_3:34136900-34136919 Msa0638610:CDS 45.0%
CCAAATCTGTGCAGAATCAC+TGG - chr4_3:34137016-34137035 None:intergenic 45.0%
CCAGTGATTCTGCACAGATT+TGG + chr4_3:34137013-34137032 Msa0638610:CDS 45.0%
TTGGACTTAGAACGAACAGC+GGG + chr4_3:34137032-34137051 Msa0638610:CDS 45.0%
GATTTCACAGAGGTGGTGAT+GGG + chr4_3:34137062-34137081 Msa0638610:CDS 45.0%
GAAAGAATGCTGACGGTAAC+TGG - chr4_3:34137115-34137134 None:intergenic 45.0%
TCTCTCGGAAAGAATGCTGA+CGG - chr4_3:34137122-34137141 None:intergenic 45.0%
! AATTCTGTTGAGGTGCTTCC+TGG + chr4_3:34137244-34137263 Msa0638610:CDS 45.0%
!!! CTTCAGATTTTGACTCCTGG+GGG + chr4_3:34137274-34137293 Msa0638610:CDS 45.0%
!! TATAAACTAAAAAATATATT+GGG - chr4_3:34133351-34133370 None:intergenic 5.0%
!! AGGATGGGGAGTGTTACTGA+AGG + chr4_3:34133518-34133537 Msa0638610:intron 50.0%
! GCTACGCGGAATTTTCTCAC+CGG - chr4_3:34133705-34133724 None:intergenic 50.0%
!! CTTACGCTCTAGAAGCGCAT+TGG - chr4_3:34133783-34133802 None:intergenic 50.0%
!! CAATGCGCTTCTAGAGCGTA+AGG + chr4_3:34133781-34133800 Msa0638610:CDS 50.0%
CAAATATACTCGGACGAGCC+TGG - chr4_3:34133865-34133884 None:intergenic 50.0%
TCCTCAGCATGAACAACAGG+TGG + chr4_3:34134135-34134154 Msa0638610:CDS 50.0%
TCCACCTGTTGTTCATGCTG+AGG - chr4_3:34134139-34134158 None:intergenic 50.0%
AGCATGAACAACAGGTGGAG+AGG + chr4_3:34134140-34134159 Msa0638610:CDS 50.0%
!! GGAGAGGTTAGCTTTGAGTC+TGG + chr4_3:34134156-34134175 Msa0638610:CDS 50.0%
ACACTAGCTGTTAGACCACG+AGG - chr4_3:34134235-34134254 None:intergenic 50.0%
TCGTGGTCTAACAGCTAGTG+TGG + chr4_3:34134234-34134253 Msa0638610:CDS 50.0%
AATTGCTTTGTGCCCCGAGA+AGG - chr4_3:34134383-34134402 None:intergenic 50.0%
GGGCACAAAGCAATTCTGTC+TGG + chr4_3:34134388-34134407 Msa0638610:CDS 50.0%
AACCAACAACTCCACCAGCA+GGG - chr4_3:34134414-34134433 None:intergenic 50.0%
TAACCAACAACTCCACCAGC+AGG - chr4_3:34134415-34134434 None:intergenic 50.0%
!! AGCATATCGACTCACATCCG+TGG - chr4_3:34134503-34134522 None:intergenic 50.0%
ACGGATGTGAGTCGATATGC+TGG + chr4_3:34134502-34134521 Msa0638610:CDS 50.0%
GTGCTGGAAACCCAAATTGC+TGG + chr4_3:34134538-34134557 Msa0638610:CDS 50.0%
GACATAAACACTGTGGCTGC+TGG + chr4_3:34134586-34134605 Msa0638610:CDS 50.0%
ATAAACACTGTGGCTGCTGG+AGG + chr4_3:34134589-34134608 Msa0638610:CDS 50.0%
! CAAGAGGCTGGTCCTCATTT+GGG - chr4_3:34134780-34134799 None:intergenic 50.0%
! TCAAGAGGCTGGTCCTCATT+TGG - chr4_3:34134781-34134800 None:intergenic 50.0%
ACGGTCGAAGAGATTGCACT+TGG + chr4_3:34134889-34134908 Msa0638610:CDS 50.0%
CATGCACTTGCTTGCTTTGG+AGG + chr4_3:34134991-34135010 Msa0638610:CDS 50.0%
TGTGCTATAGCCAGGTCTCT+AGG + chr4_3:34135033-34135052 Msa0638610:CDS 50.0%
! GAGCCTTATGCTGCGGTTTA+TGG + chr4_3:34135141-34135160 Msa0638610:CDS 50.0%
AAGCCATAGAACCTGCCTCT+GGG + chr4_3:34135475-34135494 Msa0638610:CDS 50.0%
ATTATAGGACTCCCAGAGGC+AGG - chr4_3:34135489-34135508 None:intergenic 50.0%
GGGTATGGACATACGATGTC+TGG + chr4_3:34135579-34135598 Msa0638610:CDS 50.0%
TATGGGTATAGCCGAGCAGA+TGG + chr4_3:34135773-34135792 Msa0638610:CDS 50.0%
ATGGGTATAGCCGAGCAGAT+GGG + chr4_3:34135774-34135793 Msa0638610:CDS 50.0%
CAAAGTCCTTCCCATCTGCT+CGG - chr4_3:34135787-34135806 None:intergenic 50.0%
GCTCTATTTGATCCTCACGG+GGG + chr4_3:34135858-34135877 Msa0638610:CDS 50.0%
CGTGAGGTGCATTTGCAACT+AGG - chr4_3:34135884-34135903 None:intergenic 50.0%
GACATTGCTCCTAGATGGAC+AGG - chr4_3:34135909-34135928 None:intergenic 50.0%
GTTACTAACCATCCGTCAGC+CGG + chr4_3:34135990-34136009 Msa0638610:CDS 50.0%
ATCAGGAAGATGGCTACCTC+CGG - chr4_3:34136012-34136031 None:intergenic 50.0%
AGAGGCCATCATGCAGAGAT+AGG + chr4_3:34136089-34136108 Msa0638610:CDS 50.0%
GAGGCCATCATGCAGAGATA+GGG + chr4_3:34136090-34136109 Msa0638610:CDS 50.0%
AGGCCATCATGCAGAGATAG+GGG + chr4_3:34136091-34136110 Msa0638610:CDS 50.0%
TACCCCCTATCTCTGCATGA+TGG - chr4_3:34136097-34136116 None:intergenic 50.0%
!! GAGATAGGGGGTATTACTCC+TGG + chr4_3:34136104-34136123 Msa0638610:CDS 50.0%
! GAAAATGGAGGCATGCTTCC+AGG - chr4_3:34136125-34136144 None:intergenic 50.0%
GACCGTGGAACTAAGATTCG+AGG + chr4_3:34136254-34136273 Msa0638610:CDS 50.0%
CTAAGATTCGAGGAACTCGC+AGG + chr4_3:34136264-34136283 Msa0638610:CDS 50.0%
GCCAAACAGCCTTGATTGAG+AGG - chr4_3:34136692-34136711 None:intergenic 50.0%
! CAATCAAGGCTGTTTGGCTC+CGG + chr4_3:34136694-34136713 Msa0638610:CDS 50.0%
GATAGTGCAGCTGTAGTAGG+AGG + chr4_3:34136758-34136777 Msa0638610:CDS 50.0%
GAAACCATTGGAGGTGGAAG+TGG + chr4_3:34136899-34136918 Msa0638610:CDS 50.0%
AACCATTGGAGGTGGAAGTG+GGG + chr4_3:34136901-34136920 Msa0638610:CDS 50.0%
TGGACTTAGAACGAACAGCG+GGG + chr4_3:34137033-34137052 Msa0638610:CDS 50.0%
! GGAGATGGATTTCACAGAGG+TGG + chr4_3:34137055-34137074 Msa0638610:CDS 50.0%
GGATTTCACAGAGGTGGTGA+TGG + chr4_3:34137061-34137080 Msa0638610:CDS 50.0%
ATGCTGAAATCCCGGGCCAT+CGG + chr4_3:34133588-34133607 Msa0638610:CDS 55.0%
AAATCCCGGGCCATCGGAAT+GGG + chr4_3:34133594-34133613 Msa0638610:CDS 55.0%
ACTATCCCATTCCGATGGCC+CGG - chr4_3:34133602-34133621 None:intergenic 55.0%
GAACTATGACGATGCACCGG+TGG + chr4_3:34133649-34133668 Msa0638610:CDS 55.0%
! TATGACGATGCACCGGTGGA+AGG + chr4_3:34133653-34133672 Msa0638610:CDS 55.0%
! ATGACGATGCACCGGTGGAA+GGG + chr4_3:34133654-34133673 Msa0638610:CDS 55.0%
! ATGCACCGGTGGAAGGGATA+CGG + chr4_3:34133660-34133679 Msa0638610:CDS 55.0%
ATCCTCCGTATCCCTTCCAC+CGG - chr4_3:34133668-34133687 None:intergenic 55.0%
GGAAGGGATACGGAGGATTC+TGG + chr4_3:34133670-34133689 Msa0638610:CDS 55.0%
CGAGGAACAGCACGAACCAT+GGG - chr4_3:34134217-34134236 None:intergenic 55.0%
ACGAGGAACAGCACGAACCA+TGG - chr4_3:34134218-34134237 None:intergenic 55.0%
! ATGGTTCGTGCTGTTCCTCG+TGG + chr4_3:34134217-34134236 Msa0638610:CDS 55.0%
!! TGCGCCAGAGAGTACCTTCT+CGG + chr4_3:34134366-34134385 Msa0638610:CDS 55.0%
! GGGTGTGCTCCAACTGATTC+TGG - chr4_3:34134658-34134677 None:intergenic 55.0%
GAATCAGTTGGAGCACACCC+AGG + chr4_3:34134658-34134677 Msa0638610:CDS 55.0%
!! CTTGCTTGCTTTGGAGGTGC+TGG + chr4_3:34134997-34135016 Msa0638610:CDS 55.0%
! AGTGCAGGAGCCTTATGCTG+CGG + chr4_3:34135134-34135153 Msa0638610:CDS 55.0%
AGGCACAGACACTGCCATCA+TGG + chr4_3:34135293-34135312 Msa0638610:CDS 55.0%
GAGGCAGGTTCTATGGCTTG+TGG - chr4_3:34135474-34135493 None:intergenic 55.0%
CAAGCCATAGAACCTGCCTC+TGG + chr4_3:34135474-34135493 Msa0638610:CDS 55.0%
ACTCCCAGAGGCAGGTTCTA+TGG - chr4_3:34135481-34135500 None:intergenic 55.0%
GGCCCAGCAATCGTCATGAA+CGG + chr4_3:34135600-34135619 Msa0638610:CDS 55.0%
GTATAGCCGAGCAGATGGGA+AGG + chr4_3:34135778-34135797 Msa0638610:CDS 55.0%
CCTAGATGGACAGGAACGTG+AGG - chr4_3:34135900-34135919 None:intergenic 55.0%
CCTCACGTTCCTGTCCATCT+AGG + chr4_3:34135897-34135916 Msa0638610:CDS 55.0%
GGCCATCATGCAGAGATAGG+GGG + chr4_3:34136092-34136111 Msa0638610:CDS 55.0%
GGCAGCTCCTTCCTCCAATA+TGG - chr4_3:34136153-34136172 None:intergenic 55.0%
GGAGGAAGGAGCTGCCATTA+AGG + chr4_3:34136157-34136176 Msa0638610:CDS 55.0%
TTCCACGGTCATCGGAGCTT+GGG - chr4_3:34136244-34136263 None:intergenic 55.0%
CAGGCTTGTGCTTGTTCGCA+AGG + chr4_3:34136830-34136849 Msa0638610:CDS 55.0%
!! AAGTGGGGCTGGTCCTACAT+GGG + chr4_3:34136916-34136935 Msa0638610:CDS 55.0%
CTACATGGGAAGGGACCAGT+GGG + chr4_3:34136930-34136949 Msa0638610:CDS 55.0%
TACATGGGAAGGGACCAGTG+GGG + chr4_3:34136931-34136950 Msa0638610:CDS 55.0%
GGACTTAGAACGAACAGCGG+GGG + chr4_3:34137034-34137053 Msa0638610:CDS 55.0%
! GGGGGAGATGGATTTCACAG+AGG + chr4_3:34137052-34137071 Msa0638610:CDS 55.0%
!! AGGTGGTGATGGGCTTGTCA+GGG + chr4_3:34137072-34137091 Msa0638610:CDS 55.0%
AGGTGCATGGACACGTCTCT+CGG - chr4_3:34137137-34137156 None:intergenic 55.0%
AGACGTGTCCATGCACCTAG+AGG + chr4_3:34137139-34137158 Msa0638610:CDS 55.0%
GACGTGTCCATGCACCTAGA+GGG + chr4_3:34137140-34137159 Msa0638610:CDS 55.0%
CATGCACCTAGAGGGCTGAA+GGG + chr4_3:34137148-34137167 Msa0638610:CDS 55.0%
!!! CAGATTTTGACTCCTGGGGG+TGG + chr4_3:34137277-34137296 Msa0638610:CDS 55.0%
!!! ATTTTGACTCCTGGGGGTGG+TGG + chr4_3:34137280-34137299 Msa0638610:CDS 55.0%
GAAATCCCGGGCCATCGGAA+TGG + chr4_3:34133593-34133612 Msa0638610:CDS 60.0%
CTATCCCATTCCGATGGCCC+GGG - chr4_3:34133601-34133620 None:intergenic 60.0%
!! GCGCCAGAGAGTACCTTCTC+GGG + chr4_3:34134367-34134386 Msa0638610:CDS 60.0%
!! CGCCAGAGAGTACCTTCTCG+GGG + chr4_3:34134368-34134387 Msa0638610:CDS 60.0%
!! TGCCCCGAGAAGGTACTCTC+TGG - chr4_3:34134373-34134392 None:intergenic 60.0%
GCAATTCTGTCTGGCCCTGC+TGG + chr4_3:34134397-34134416 Msa0638610:CDS 60.0%
ATTCTGTCTGGCCCTGCTGG+TGG + chr4_3:34134400-34134419 Msa0638610:CDS 60.0%
AACACTGTGGCTGCTGGAGG+TGG + chr4_3:34134592-34134611 Msa0638610:CDS 60.0%
AGTTGGAGCACACCCAGGTC+CGG + chr4_3:34134663-34134682 Msa0638610:CDS 60.0%
TTTGCAACTAGGCCCCCGTG+AGG - chr4_3:34135873-34135892 None:intergenic 60.0%
ACTAACCATCCGTCAGCCGG+AGG + chr4_3:34135993-34136012 Msa0638610:CDS 60.0%
AGATGGCTACCTCCGGCTGA+CGG - chr4_3:34136005-34136024 None:intergenic 60.0%
TTCCCAAGCTCCGATGACCG+TGG + chr4_3:34136239-34136258 Msa0638610:CDS 60.0%
GTTCCACGGTCATCGGAGCT+TGG - chr4_3:34136245-34136264 None:intergenic 60.0%
GCTGCAGCTGTTACGGCTTC+TGG - chr4_3:34136629-34136648 None:intergenic 60.0%
AGCCCCACTTCCACCTCCAA+TGG - chr4_3:34136906-34136925 None:intergenic 60.0%
ATTGGAGGTGGAAGTGGGGC+TGG + chr4_3:34136905-34136924 Msa0638610:CDS 60.0%
!! GAAGTGGGGCTGGTCCTACA+TGG + chr4_3:34136915-34136934 Msa0638610:CDS 60.0%
!! GGGCTGGTCCTACATGGGAA+GGG + chr4_3:34136921-34136940 Msa0638610:CDS 60.0%
CCACTGGTCCCTTCCCATGT+AGG - chr4_3:34136932-34136951 None:intergenic 60.0%
CCTACATGGGAAGGGACCAG+TGG + chr4_3:34136929-34136948 Msa0638610:CDS 60.0%
CATGTGGCACTGTACCCCAC+TGG - chr4_3:34136948-34136967 None:intergenic 60.0%
AGAACGAACAGCGGGGGAGA+TGG + chr4_3:34137040-34137059 Msa0638610:CDS 60.0%
!! GAGGTGGTGATGGGCTTGTC+AGG + chr4_3:34137071-34137090 Msa0638610:CDS 60.0%
CCTTCAGCCCTCTAGGTGCA+TGG - chr4_3:34137150-34137169 None:intergenic 60.0%
CCATGCACCTAGAGGGCTGA+AGG + chr4_3:34137147-34137166 Msa0638610:CDS 60.0%
CACCTAGAGGGCTGAAGGGA+GGG + chr4_3:34137152-34137171 Msa0638610:CDS 60.0%
TTCCCTCCCTTCAGCCCTCT+AGG - chr4_3:34137157-34137176 None:intergenic 60.0%
GGATGGGGCTCTCCAGTGTA+AGG + chr4_3:34137301-34137320 Msa0638610:CDS 60.0%
CACCGGTGGAAGGGATACGG+AGG + chr4_3:34133663-34133682 Msa0638610:CDS 65.0%
GGCCCTGCTGGTGGAGTTGT+TGG + chr4_3:34134409-34134428 Msa0638610:CDS 65.0%
!! GGGGCTGGTCCTACATGGGA+AGG + chr4_3:34136920-34136939 Msa0638610:CDS 65.0%
GCACCTAGAGGGCTGAAGGG+AGG + chr4_3:34137151-34137170 Msa0638610:CDS 65.0%
GGGCTGAAGGGAGGGAACGA+CGG + chr4_3:34137160-34137179 Msa0638610:CDS 65.0%
!! TGACTCCTGGGGGTGGTGGA+TGG + chr4_3:34137284-34137303 Msa0638610:CDS 65.0%
!! GACTCCTGGGGGTGGTGGAT+GGG + chr4_3:34137285-34137304 Msa0638610:CDS 65.0%
!! ACTCCTGGGGGTGGTGGATG+GGG + chr4_3:34137286-34137305 Msa0638610:CDS 65.0%
GGCTACCTCCGGCTGACGGA+TGG - chr4_3:34136001-34136020 None:intergenic 70.0%
GGAGGGAACGACGGTGCACG+TGG + chr4_3:34137169-34137188 Msa0638610:CDS 70.0%
GAGCCCCATCCACCACCCCC+AGG - chr4_3:34137292-34137311 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34133135 34137548 34133135 ID=Msa0638610;Name=Msa0638610
chr4_3 mRNA 34133135 34137548 34133135 ID=Msa0638610-mRNA-1;Parent=Msa0638610;Name=Msa0638610-mRNA-1;_AED=0.01;_eAED=0.01;_QI=71|0|0.5|1|0|0.5|2|227|1266
chr4_3 exon 34133135 34133205 34133135 ID=Msa0638610-mRNA-1:exon:7782;Parent=Msa0638610-mRNA-1
chr4_3 exon 34133521 34137548 34133521 ID=Msa0638610-mRNA-1:exon:7783;Parent=Msa0638610-mRNA-1
chr4_3 five_prime_UTR 34133135 34133205 34133135 ID=Msa0638610-mRNA-1:five_prime_utr;Parent=Msa0638610-mRNA-1
chr4_3 CDS 34133521 34137321 34133521 ID=Msa0638610-mRNA-1:cds;Parent=Msa0638610-mRNA-1
chr4_3 three_prime_UTR 34137322 34137548 34137322 ID=Msa0638610-mRNA-1:three_prime_utr;Parent=Msa0638610-mRNA-1
Gene Sequence

>Msa0638610

ATGGGGAGTGTTACTGAAGGAAAGTTAAGATTTTGTATCGACAGAGGCGGTACCTTTACTGATGTTTATGCTGAAATCCCGGGCCATCGGAATGGGATAGTATTGAAGCTTTTGTCAGTTGATCCTTTGAACTATGACGATGCACCGGTGGAAGGGATACGGAGGATTCTGGAAGAGTTTACCGGTGAGAAAATTCCGCGTAGCTCGAAAATACCTACTGAGAAGATCGAGTGGATAAGGATGGGTACAACTGTGGCAACCAATGCGCTTCTAGAGCGTAAGGGAGAAAGGATTGCTGTGTGTGTGACTAGAGGCTTTCGTGATTTGCTTCAGATTGGTAACCAGGCTCGTCCGAGTATATTTGATCTTACTGTGTCAAAGCCTTCGAATCTTTATGAAGAGGTTGTTGAGGTGGAAGAGAGAGTTGAACTTGTTCAGGCAAAGGAAGAAGAAGAAAGTCTGAGTGCTTCTTCGCCAATTGTTAAAGGTATTTCGGGAGAGCTTGTTAAGATTGTAAAGCCTCTTAATGAAGAAGCGTTGAAGCTTGTACTGAAAAATTTACTGGAGAAGGGAATTAGTTGTCTAGCGGTTGTTTTGATGCACTCGTACACTTATCCTCAGCATGAACAACAGGTGGAGAGGTTAGCTTTGAGTCTGGGATTTAAACATGTTTCGATATCATCTGCTTTGTCTCCCATGGTTCGTGCTGTTCCTCGTGGTCTAACAGCTAGTGTGGATGCTTATTTGACCCCAGTTATTAAAGACTACTTGTCAGGATTCATTTCCAAATTTGAAGAGGGGCTTAGCAAGTTGAATGTTTTGTTTATGCAATCAGATGGAGGACTTGCGCCAGAGAGTACCTTCTCGGGGCACAAAGCAATTCTGTCTGGCCCTGCTGGTGGAGTTGTTGGTTACTCACAAACTCTTTTTGGTCTTGAAACAGAAAAGCCATTGATTGGATTTGATATGGGAGGTACATCCACGGATGTGAGTCGATATGCTGGAAGTTATGAGCAAGTGCTGGAAACCCAAATTGCTGGTGCCATAATTCAAGCACCTCAGCTTGACATAAACACTGTGGCTGCTGGAGGTGGTTCAAAGTTAAAGTTCCAGTTCGGTGCTTTTCAAGTTGGACCAGAATCAGTTGGAGCACACCCAGGTCCGGTATGTTATCGAAAAGGTGGAGAGTTGGCAATTACAGATGCCAATCTTGTTCTCGGTTATGTCATTCCTGATTATTTCCCATCCATATTTGGCCCAAATGAGGACCAGCCTCTTGATGTCAAGTCAACAAGAGAAGAATTTGAGAAGCTTGCTGGTAATATAAATGCTTATCGGAAGAATCAGGATCCATCTGCAAAAGACATGACGGTCGAAGAGATTGCACTTGGCTTTGTGGATGTTGCTAATGAGACAATGTGTCGTCCAATAAGGCAGTTGACTGAAATGAAGGGCCATGAGACAAAGAATCATGCACTTGCTTGCTTTGGAGGTGCTGGACCTCAACATGCTTGTGCTATAGCCAGGTCTCTAGGTATGAAAGAAGTGCTTATTCACAAATTTTGTGGGATTTTAAGCGCTTATGGAATGGGATTGGCAAATGTTGTAGAAGAAGTGCAGGAGCCTTATGCTGCGGTTTATGGAACTGAATCTACTCTTGAGGCTTCACAACGAGAAGCTCTGTTACTGAAACAAGTTAAGCAGAAGTTACAAAGTCAAGGATTTAAAGAGGAAAATATTTCAACAGACACATATTTAAACTTGAGATATGAAGGCACAGACACTGCCATCATGGTCAAAAGGAAAATAGTTAAAGATGAAATACCATTTGACTATGCTACCGAGTTTGTGAGCTTGTTTCAGCAGGAGTATGGTTTTAAACTCCAGAACAGAAATATTGTGATTTGTGATGTTAGAGTTCGTGGTACAGGAGTTACCAATATATTGAGACCACAAGCCATAGAACCTGCCTCTGGGAGTCCTATAATTGAAGGCTACTATAAGGTTTACTTTGGAAATGGTTGGCAGGAAGCACCTCTCTATAAGCTTGAAAAGCTGGGGTATGGACATACGATGTCTGGCCCAGCAATCGTCATGAACGGTAATAGCACTGTGATTGTAGAACCCAATTGTAGAGCCATTATAACCAAATATGGAAACATCAAAATTGAAATTGATTCACCTGTGAGCAGCATTAAAATATCAGATAAAGTTGCAGATGTTGTACAACTCTCTATTTTCAATCACAGGTTTATGGGTATAGCCGAGCAGATGGGAAGGACTTTGCAAAGAACTTCAATTTCGACAAATATCAAAGAACGGCTTGATTTTTCTTGTGCTCTATTTGATCCTCACGGGGGCCTAGTTGCAAATGCACCTCACGTTCCTGTCCATCTAGGAGCAATGTCTAGTACAGTTCGTTGGCAACTCAATTACTGGAACGACAATTTGAATGAAGGAGATGTTTTGGTTACTAACCATCCGTCAGCCGGAGGTAGCCATCTTCCTGATATAACTGTTGTTACACCTGTTTTTTTTAATGGGAAGTTGGTATTTTTTGTTGCAAATAGAGGCCATCATGCAGAGATAGGGGGTATTACTCCTGGAAGCATGCCTCCATTTTCAAAGTCCATATTGGAGGAAGGAGCTGCCATTAAGGCGTTTAAGCTTGTTGAAAAAGGTGTCTTTCAGGAAGAGGGGATTGTTAAACTTTTACAGTTCCCAAGCTCCGATGACCGTGGAACTAAGATTCGAGGAACTCGCAGGATTCAAGATAACCTATCTGATTTGCAAGCACAAGTAGCAGCAAATCAAAGAGGAATTTGTCTAGTCCTGGAGCTTATTGAACAATATGGACTGGAAACTGTTCAAGCTTACATGAATTACGTACAGATGAATGCAGAAGGAGCAGTAAGAGAGATGCTGAAGTCAGTTGGTCGTAGAATTTCATCTGAGTCAAATGAAAACTCTGTGACAATTGAAGAAGAGGACTACATGGATGATGGATCTGTTATTCATTTGAAACTGAGCATTGACTCTAACAAAGGAGAAGCAATTTTTGATTTTGGTGGGACAAGTGCAGAAGTTTATGGTAATTGGAATGCACCAGAAGCCGTAACAGCTGCAGCTGTCATTTACTGCATTCGCTGTTTAGTGGATGTTGATATTCCTCTCAATCAAGGCTGTTTGGCTCCGGTGAAGATTCATATTCCAGAAGGCTCATTTCTTTCTCCTAGTGATAGTGCAGCTGTAGTAGGAGGCAATGTCCTTACATCTCAGAGAATCACCGATGTTGTATTTACTGCATTTCAGGCTTGTGCTTGTTCGCAAGGTTGTATGAATAATCTTACATTTGGAGATGACACTTTTGGGTACTATGAAACCATTGGAGGTGGAAGTGGGGCTGGTCCTACATGGGAAGGGACCAGTGGGGTACAGTGCCACATGACAAATACAAGAATGACTGATCCAGAGATATTTGAACAAAGATATCCAGTGATTCTGCACAGATTTGGACTTAGAACGAACAGCGGGGGAGATGGATTTCACAGAGGTGGTGATGGGCTTGTCAGGGAAATAGAGTTTAGGCGCCCAGTTACCGTCAGCATTCTTTCCGAGAGACGTGTCCATGCACCTAGAGGGCTGAAGGGAGGGAACGACGGTGCACGTGGTGCTAATTACATTCTAAAGAAAGATAAGCGAAAGGTTTATCTTGGTGGTAAGAATTCTGTTGAGGTGCTTCCTGGCGAAATTCTTCAGATTTTGACTCCTGGGGGTGGTGGATGGGGCTCTCCAGTGTAA
Protein sequence

>Msa0638610

MGSVTEGKLRFCIDRGGTFTDVYAEIPGHRNGIVLKLLSVDPLNYDDAPVEGIRRILEEFTGEKIPRSSKIPTEKIEWIRMGTTVATNALLERKGERIAVCVTRGFRDLLQIGNQARPSIFDLTVSKPSNLYEEVVEVEERVELVQAKEEEESLSASSPIVKGISGELVKIVKPLNEEALKLVLKNLLEKGISCLAVVLMHSYTYPQHEQQVERLALSLGFKHVSISSALSPMVRAVPRGLTASVDAYLTPVIKDYLSGFISKFEEGLSKLNVLFMQSDGGLAPESTFSGHKAILSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSKLKFQFGAFQVGPESVGAHPGPVCYRKGGELAITDANLVLGYVIPDYFPSIFGPNEDQPLDVKSTREEFEKLAGNINAYRKNQDPSAKDMTVEEIALGFVDVANETMCRPIRQLTEMKGHETKNHALACFGGAGPQHACAIARSLGMKEVLIHKFCGILSAYGMGLANVVEEVQEPYAAVYGTESTLEASQREALLLKQVKQKLQSQGFKEENISTDTYLNLRYEGTDTAIMVKRKIVKDEIPFDYATEFVSLFQQEYGFKLQNRNIVICDVRVRGTGVTNILRPQAIEPASGSPIIEGYYKVYFGNGWQEAPLYKLEKLGYGHTMSGPAIVMNGNSTVIVEPNCRAIITKYGNIKIEIDSPVSSIKISDKVADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFDPHGGLVANAPHVPVHLGAMSSTVRWQLNYWNDNLNEGDVLVTNHPSAGGSHLPDITVVTPVFFNGKLVFFVANRGHHAEIGGITPGSMPPFSKSILEEGAAIKAFKLVEKGVFQEEGIVKLLQFPSSDDRGTKIRGTRRIQDNLSDLQAQVAANQRGICLVLELIEQYGLETVQAYMNYVQMNAEGAVREMLKSVGRRISSESNENSVTIEEEDYMDDGSVIHLKLSIDSNKGEAIFDFGGTSAEVYGNWNAPEAVTAAAVIYCIRCLVDVDIPLNQGCLAPVKIHIPEGSFLSPSDSAAVVGGNVLTSQRITDVVFTAFQACACSQGCMNNLTFGDDTFGYYETIGGGSGAGPTWEGTSGVQCHMTNTRMTDPEIFEQRYPVILHRFGLRTNSGGDGFHRGGDGLVREIEFRRPVTVSILSERRVHAPRGLKGGNDGARGANYILKKDKRKVYLGGKNSVEVLPGEILQILTPGGGGWGSPV*