Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140960 | XP_024635041.2 | 87.219 | 845 | 48 | 8 | 1 | 810 | 1 | 820 | 0.0 | 1415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140960 | sp|Q6ZJM9|EHD3_ORYSJ | 32.984 | 382 | 195 | 16 | 431 | 760 | 167 | 539 | 5.36e-52 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140960 | A0A396IYH0 | 87.101 | 845 | 48 | 9 | 1 | 810 | 1 | 819 | 0.0 | 1408 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0140960 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0140960 | 0.844273 | 8.371766e-59 | -8.615850e-47 |
| Msa0008410 | Msa0140960 | 0.810864 | 9.326120e-51 | -8.615850e-47 |
| Msa0016670 | Msa0140960 | 0.804926 | 1.708388e-49 | -8.615850e-47 |
| Msa0018620 | Msa0140960 | 0.802556 | 5.303804e-49 | -8.615850e-47 |
| Msa0031340 | Msa0140960 | 0.807327 | 5.336054e-50 | -8.615850e-47 |
| Msa0044020 | Msa0140960 | 0.820959 | 5.206340e-53 | -8.615850e-47 |
| Msa0047280 | Msa0140960 | 0.810139 | 1.336890e-50 | -8.615850e-47 |
| Msa0064290 | Msa0140960 | 0.801608 | 8.310431e-49 | -8.615850e-47 |
| Msa0068680 | Msa0140960 | 0.806461 | 8.136405e-50 | -8.615850e-47 |
| Msa0073670 | Msa0140960 | 0.812032 | 5.197843e-51 | -8.615850e-47 |
| Msa0076000 | Msa0140960 | 0.806744 | 7.090832e-50 | -8.615850e-47 |
| Msa0078650 | Msa0140960 | 0.807296 | 5.418685e-50 | -8.615850e-47 |
| Msa0094120 | Msa0140960 | 0.802996 | 4.303267e-49 | -8.615850e-47 |
| Msa0101880 | Msa0140960 | 0.802973 | 4.350581e-49 | -8.615850e-47 |
| Msa0110970 | Msa0140960 | 0.826387 | 2.790037e-54 | -8.615850e-47 |
| Msa0123100 | Msa0140960 | 0.810405 | 1.171640e-50 | -8.615850e-47 |
| Msa0124340 | Msa0140960 | 0.812748 | 3.626267e-51 | -8.615850e-47 |
| Msa0126370 | Msa0140960 | 0.800202 | 1.609590e-48 | -8.615850e-47 |
| Msa0134610 | Msa0140960 | 0.809937 | 1.478360e-50 | -8.615850e-47 |
| Msa0139990 | Msa0140960 | 0.810436 | 1.153802e-50 | -8.615850e-47 |
| Msa0140960 | Msa0141620 | 0.802071 | 6.675671e-49 | -8.615850e-47 |
| Msa0140960 | Msa0142950 | 0.819542 | 1.099495e-52 | -8.615850e-47 |
| Msa0140960 | Msa0143380 | 0.800053 | 1.725892e-48 | -8.615850e-47 |
| Msa0140960 | Msa0144360 | 0.814773 | 1.298838e-51 | -8.615850e-47 |
| Msa0140960 | Msa0146260 | 0.840118 | 1.053931e-57 | -8.615850e-47 |
| Msa0140960 | Msa0149390 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa0140960 | Msa0159930 | 0.802869 | 4.570507e-49 | -8.615850e-47 |
| Msa0140960 | Msa0171290 | 0.853743 | 1.952831e-61 | -8.615850e-47 |
| Msa0140960 | Msa0185400 | 0.819701 | 1.011704e-52 | -8.615850e-47 |
| Msa0140960 | Msa0186890 | 0.821220 | 4.533302e-53 | -8.615850e-47 |
| Msa0140960 | Msa0197420 | 0.807014 | 6.214828e-50 | -8.615850e-47 |
| Msa0140960 | Msa0205850 | 0.806022 | 1.006337e-49 | -8.615850e-47 |
| Msa0140960 | Msa0220580 | 0.800942 | 1.137616e-48 | -8.615850e-47 |
| Msa0140960 | Msa0223690 | 0.807898 | 4.035491e-50 | -8.615850e-47 |
| Msa0140960 | Msa0225740 | 0.808904 | 2.462244e-50 | -8.615850e-47 |
| Msa0140960 | Msa0239450 | 0.802469 | 5.527483e-49 | -8.615850e-47 |
| Msa0140960 | Msa0245850 | 0.811980 | 5.335637e-51 | -8.615850e-47 |
| Msa0140960 | Msa0247980 | 0.800079 | 1.705348e-48 | -8.615850e-47 |
| Msa0140960 | Msa0253290 | 0.802686 | 4.987117e-49 | -8.615850e-47 |
| Msa0140960 | Msa0261930 | 0.817442 | 3.291238e-52 | -8.615850e-47 |
| Msa0140960 | Msa0284410 | 0.812572 | 3.963915e-51 | -8.615850e-47 |
| Msa0140960 | Msa0287310 | 0.828291 | 9.756762e-55 | -8.615850e-47 |
| Msa0140960 | Msa0287650 | 0.822609 | 2.161139e-53 | -8.615850e-47 |
| Msa0140960 | Msa0292120 | 0.813299 | 2.745544e-51 | -8.615850e-47 |
| Msa0140960 | Msa0295590 | 0.812766 | 3.594327e-51 | -8.615850e-47 |
| Msa0140960 | Msa0302980 | 0.808835 | 2.547894e-50 | -8.615850e-47 |
| Msa0140960 | Msa0311700 | 0.803806 | 2.924610e-49 | -8.615850e-47 |
| Msa0140960 | Msa0314210 | 0.808901 | 2.465798e-50 | -8.615850e-47 |
| Msa0140960 | Msa0316810 | 0.829942 | 3.880407e-55 | -8.615850e-47 |
| Msa0140960 | Msa0317730 | 0.817930 | 2.553496e-52 | -8.615850e-47 |
| Msa0140960 | Msa0325850 | 0.828384 | 9.264547e-55 | -8.615850e-47 |
| Msa0140960 | Msa0333600 | 0.804786 | 1.827591e-49 | -8.615850e-47 |
| Msa0140960 | Msa0334040 | 0.820256 | 7.549868e-53 | -8.615850e-47 |
| Msa0140960 | Msa0355270 | 0.816599 | 5.089050e-52 | -8.615850e-47 |
| Msa0140960 | Msa0366240 | 0.802124 | 6.509389e-49 | -8.615850e-47 |
| Msa0140960 | Msa0402330 | 0.807353 | 5.267607e-50 | -8.615850e-47 |
| Msa0140960 | Msa0410500 | 0.828647 | 8.003055e-55 | -8.615850e-47 |
| Msa0140960 | Msa0413450 | 0.813301 | 2.743098e-51 | -8.615850e-47 |
| Msa0140960 | Msa0417270 | 0.807808 | 4.217866e-50 | -8.615850e-47 |
| Msa0140960 | Msa0417880 | 0.810304 | 1.231790e-50 | -8.615850e-47 |
| Msa0140960 | Msa0423900 | 0.923156 | 3.849256e-89 | -8.615850e-47 |
| Msa0140960 | Msa0431770 | 0.821091 | 4.855389e-53 | -8.615850e-47 |
| Msa0140960 | Msa0467430 | 0.811962 | 5.385340e-51 | -8.615850e-47 |
| Msa0140960 | Msa0475790 | 0.822705 | 2.053541e-53 | -8.615850e-47 |
| Msa0140960 | Msa0479170 | 0.825447 | 4.664986e-54 | -8.615850e-47 |
| Msa0140960 | Msa0481460 | 0.801892 | 7.266342e-49 | -8.615850e-47 |
| Msa0140960 | Msa0490750 | 0.813223 | 2.854284e-51 | -8.615850e-47 |
| Msa0140960 | Msa0503060 | 0.819532 | 1.105215e-52 | -8.615850e-47 |
| Msa0140960 | Msa0505770 | 0.805941 | 1.046539e-49 | -8.615850e-47 |
| Msa0140960 | Msa0515640 | 0.961401 | 1.166025e-119 | -8.615850e-47 |
| Msa0140960 | Msa0541860 | 0.821522 | 3.860385e-53 | -8.615850e-47 |
| Msa0140960 | Msa0552810 | 0.802991 | 4.313705e-49 | -8.615850e-47 |
| Msa0140960 | Msa0555910 | 0.802533 | 5.362100e-49 | -8.615850e-47 |
| Msa0140960 | Msa0560080 | 0.829016 | 6.514669e-55 | -8.615850e-47 |
| Msa0140960 | Msa0574890 | 0.804762 | 1.849011e-49 | -8.615850e-47 |
| Msa0140960 | Msa0620230 | 0.816660 | 4.932746e-52 | -8.615850e-47 |
| Msa0140960 | Msa0623700 | 0.807573 | 4.732854e-50 | -8.615850e-47 |
| Msa0140960 | Msa0627450 | 0.813923 | 2.001401e-51 | -8.615850e-47 |
| Msa0140960 | Msa0645170 | 0.819954 | 8.854615e-53 | -8.615850e-47 |
| Msa0140960 | Msa0655560 | 0.811454 | 6.945527e-51 | -8.615850e-47 |
| Msa0140960 | Msa0657580 | 0.805528 | 1.278380e-49 | -8.615850e-47 |
| Msa0140960 | Msa0657750 | 0.809187 | 2.141606e-50 | -8.615850e-47 |
| Msa0140960 | Msa0673010 | -0.804071 | 2.575348e-49 | -8.615850e-47 |
| Msa0140960 | Msa0683510 | 0.812228 | 4.710843e-51 | -8.615850e-47 |
| Msa0140960 | Msa0692080 | 0.810643 | 1.040707e-50 | -8.615850e-47 |
| Msa0140960 | Msa0701280 | 0.818126 | 2.306465e-52 | -8.615850e-47 |
| Msa0140960 | Msa0702340 | 0.839934 | 1.176968e-57 | -8.615850e-47 |
| Msa0140960 | Msa0702590 | 0.842312 | 2.792166e-58 | -8.615850e-47 |
| Msa0140960 | Msa0702660 | 0.839342 | 1.677726e-57 | -8.615850e-47 |
| Msa0140960 | Msa0703230 | 0.824965 | 6.063757e-54 | -8.615850e-47 |
| Msa0140960 | Msa0708520 | 0.804114 | 2.523150e-49 | -8.615850e-47 |
| Msa0140960 | Msa0734960 | 0.812387 | 4.350103e-51 | -8.615850e-47 |
| Msa0140960 | Msa0737570 | 0.800100 | 1.688354e-48 | -8.615850e-47 |
| Msa0140960 | Msa0743800 | 0.815430 | 9.284345e-52 | -8.615850e-47 |
| Msa0140960 | Msa0762210 | 0.815668 | 8.216647e-52 | -8.615850e-47 |
| Msa0140960 | Msa0788770 | 0.810607 | 1.059915e-50 | -8.615850e-47 |
| Msa0140960 | Msa0821760 | 0.805088 | 1.580366e-49 | -8.615850e-47 |
| Msa0140960 | Msa0824640 | 0.835005 | 2.157762e-56 | -8.615850e-47 |
| Msa0140960 | Msa0824660 | 0.808543 | 2.941395e-50 | -8.615850e-47 |
| Msa0140960 | Msa0828560 | 0.800180 | 1.626740e-48 | -8.615850e-47 |
| Msa0140960 | Msa0828920 | 0.802489 | 5.474802e-49 | -8.615850e-47 |
| Msa0140960 | Msa0850960 | 0.803559 | 3.289747e-49 | -8.615850e-47 |
| Msa0140960 | Msa0856920 | 0.810479 | 1.129148e-50 | -8.615850e-47 |
| Msa0140960 | Msa0864010 | 0.838811 | 2.302933e-57 | -8.615850e-47 |
| Msa0140960 | Msa0869100 | 0.863049 | 3.284145e-64 | -8.615850e-47 |
| Msa0140960 | Msa0880450 | 0.804428 | 2.170818e-49 | -8.615850e-47 |
| Msa0140960 | Msa0888940 | 0.809704 | 1.659234e-50 | -8.615850e-47 |
| Msa0140960 | Msa0896010 | 0.807920 | 3.993784e-50 | -8.615850e-47 |
| Msa0140960 | Msa0896970 | 0.805125 | 1.552197e-49 | -8.615850e-47 |
| Msa0140960 | Msa0898760 | 0.809170 | 2.160320e-50 | -8.615850e-47 |
| Msa0140960 | Msa0906690 | 0.809080 | 2.257744e-50 | -8.615850e-47 |
| Msa0140960 | Msa0908050 | 0.807002 | 6.251068e-50 | -8.615850e-47 |
| Msa0140960 | Msa0926470 | 0.803899 | 2.797095e-49 | -8.615850e-47 |
| Msa0140960 | Msa0933230 | 0.814414 | 1.559575e-51 | -8.615850e-47 |
| Msa0140960 | Msa0933310 | 0.827486 | 1.523613e-54 | -8.615850e-47 |
| Msa0140960 | Msa0939000 | 0.807404 | 5.139623e-50 | -8.615850e-47 |
| Msa0140960 | Msa0944660 | 0.820044 | 8.445074e-53 | -8.615850e-47 |
| Msa0140960 | Msa0971090 | 0.826069 | 3.320767e-54 | -8.615850e-47 |
| Msa0140960 | Msa0980940 | 0.832515 | 9.047058e-56 | -8.615850e-47 |
| Msa0140960 | Msa1004420 | 0.843674 | 1.211445e-58 | -8.615850e-47 |
| Msa0140960 | Msa1050910 | 0.811648 | 6.301882e-51 | -8.615850e-47 |
| Msa0140960 | Msa1051600 | 0.802361 | 5.818847e-49 | -8.615850e-47 |
| Msa0140960 | Msa1063950 | 0.820275 | 7.473559e-53 | -8.615850e-47 |
| Msa0140960 | Msa1071530 | 0.804788 | 1.825850e-49 | -8.615850e-47 |
| Msa0140960 | Msa1087980 | 0.808763 | 2.639869e-50 | -8.615850e-47 |
| Msa0140960 | Msa1097640 | 0.808022 | 3.798899e-50 | -8.615850e-47 |
| Msa0140960 | Msa1102770 | 0.835073 | 2.074680e-56 | -8.615850e-47 |
| Msa0140960 | Msa1127890 | 0.831471 | 1.638013e-55 | -8.615850e-47 |
| Msa0140960 | Msa1128710 | 0.811071 | 8.408966e-51 | -8.615850e-47 |
| Msa0140960 | Msa1133710 | 0.801955 | 7.051256e-49 | -8.615850e-47 |
| Msa0140960 | Msa1139810 | 0.802522 | 5.391193e-49 | -8.615850e-47 |
| Msa0140960 | Msa1140690 | 0.823608 | 1.264060e-53 | -8.615850e-47 |
| Msa0140960 | Msa1151910 | 0.824127 | 9.551529e-54 | -8.615850e-47 |
| Msa0140960 | Msa1165740 | 0.807750 | 4.339165e-50 | -8.615850e-47 |
| Msa0140960 | Msa1165870 | 0.812200 | 4.778532e-51 | -8.615850e-47 |
| Msa0140960 | Msa1174100 | 0.802766 | 4.800180e-49 | -8.615850e-47 |
| Msa0140960 | Msa1174530 | 0.807685 | 4.480438e-50 | -8.615850e-47 |
| Msa0140960 | Msa1199570 | 0.804848 | 1.773536e-49 | -8.615850e-47 |
| Msa0140960 | Msa1209460 | 0.800729 | 1.257158e-48 | -8.615850e-47 |
| Msa0140960 | Msa1224840 | 0.843822 | 1.105953e-58 | -8.615850e-47 |
| Msa0140960 | Msa1227690 | 0.804734 | 1.874037e-49 | -8.615850e-47 |
| Msa0140960 | Msa1228290 | 0.842709 | 2.191695e-58 | -8.615850e-47 |
| Msa0140960 | Msa1235250 | 0.805333 | 1.404063e-49 | -8.615850e-47 |
| Msa0140960 | Msa1276660 | 0.825021 | 5.881810e-54 | -8.615850e-47 |
| Msa0140960 | Msa1295910 | 0.807448 | 5.030160e-50 | -8.615850e-47 |
| Msa0140960 | Msa1297290 | 0.816195 | 6.267731e-52 | -8.615850e-47 |
| Msa0140960 | Msa1303250 | 0.805328 | 1.407726e-49 | -8.615850e-47 |
| Msa0140960 | Msa1307950 | 0.801298 | 9.618448e-49 | -8.615850e-47 |
| Msa0140960 | Msa1316780 | 0.810427 | 1.158727e-50 | -8.615850e-47 |
| Msa0140960 | Msa1316830 | 0.803187 | 3.929328e-49 | -8.615850e-47 |
| Msa0140960 | Msa1323990 | 0.800147 | 1.651769e-48 | -8.615850e-47 |
| Msa0140960 | Msa1328710 | 0.811646 | 6.309835e-51 | -8.615850e-47 |
| Msa0140960 | Msa1336110 | 0.805228 | 1.477564e-49 | -8.615850e-47 |
| Msa0140960 | Msa1345360 | 0.802010 | 6.872802e-49 | -8.615850e-47 |
| Msa0140960 | Msa1346370 | 0.807188 | 5.710511e-50 | -8.615850e-47 |
| Msa0140960 | Msa1361400 | 0.803151 | 3.997257e-49 | -8.615850e-47 |
| Msa0140960 | Msa1369150 | 0.829980 | 3.800037e-55 | -8.615850e-47 |
| Msa0140960 | Msa1373330 | 0.833789 | 4.357177e-56 | -8.615850e-47 |
| Msa0140960 | Msa1374040 | 0.836803 | 7.552276e-57 | -8.615850e-47 |
| Msa0140960 | Msa1382540 | 0.825840 | 3.764350e-54 | -8.615850e-47 |
| Msa0140960 | Msa1385000 | 0.817658 | 2.941290e-52 | -8.615850e-47 |
| Msa0140960 | Msa1397810 | 0.806753 | 7.059198e-50 | -8.615850e-47 |
| Msa0140960 | Msa1427060 | 0.805802 | 1.119663e-49 | -8.615850e-47 |
| Msa0140960 | Msa1439610 | 0.802132 | 6.485816e-49 | -8.615850e-47 |
| Msa0140960 | Msa1461300 | 0.810686 | 1.018848e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140960 | MtrunA17_Chr3g0125331 | 87.101 | 845 | 48 | 9 | 1 | 810 | 1 | 819 | 0.0 | 1408 |
| Msa0140960 | MtrunA17_Chr6g0451001 | 38.158 | 76 | 46 | 1 | 695 | 769 | 1247 | 1322 | 1.36e-12 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140960 | AT1G77250.1 | 41.099 | 382 | 210 | 8 | 431 | 805 | 144 | 517 | 5.58e-91 | 296 |
| Msa0140960 | AT3G01460.1 | 41.176 | 68 | 40 | 0 | 695 | 762 | 1289 | 1356 | 2.68e-13 | 74.7 |
Find 190 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAAATCAAATATTCTTTC+CGG | 0.205556 | 1_3:-75643523 | None:intergenic |
| TTGATAGATTTCCTGACTTT+TGG | 0.211926 | 1_3:+75645959 | Msa0140960:three_prime_UTR |
| TGATTTGTAATTTAGGTCTT+TGG | 0.212234 | 1_3:+75643983 | Msa0140960:intron |
| AAAGCTTCAAGATACATTTA+AGG | 0.218299 | 1_3:+75644006 | Msa0140960:CDS |
| CCACGTTTCCCCAATGTCTA+TGG | 0.240436 | 1_3:-75643063 | None:intergenic |
| ATTGCCTAAAGTTGCATCTA+AGG | 0.251138 | 1_3:-75643023 | None:intergenic |
| ACACCATTTCCACTGGAAAT+TGG | 0.253590 | 1_3:-75640976 | None:intergenic |
| TCATGCAGTGTGTAGTATTT+TGG | 0.254450 | 1_3:+75646131 | Msa0140960:three_prime_UTR |
| TAGTATTTACTTGGACAAAA+AGG | 0.262736 | 1_3:-75645374 | None:intergenic |
| GTAGGAATCTGTTGATAAAT+TGG | 0.268780 | 1_3:-75644056 | None:intergenic |
| CAGCAGGGAACTTCTAAAAT+TGG | 0.284010 | 1_3:+75643280 | Msa0140960:intron |
| TTCTTTCCGGCTTCGTTGAT+TGG | 0.293038 | 1_3:-75643510 | None:intergenic |
| AGTTCAGGCGGGTTTGATTC+TGG | 0.296374 | 1_3:+75641732 | Msa0140960:CDS |
| CTCTTCAAAATTCAGAGAAT+TGG | 0.306445 | 1_3:-75645765 | None:intergenic |
| AATTAAATTCATATGGCTAT+TGG | 0.308214 | 1_3:+75645423 | Msa0140960:CDS |
| GACTTTCTGCTTCATCCTTA+AGG | 0.311475 | 1_3:-75643554 | None:intergenic |
| TTGCAGTTGTTATTAGCATT+TGG | 0.311647 | 1_3:-75645683 | None:intergenic |
| AAGTCATTACTAACAATAAC+CGG | 0.325550 | 1_3:-75645853 | None:intergenic |
| CAGTAAATTTGTAGAAGAAT+TGG | 0.327009 | 1_3:+75645706 | Msa0140960:CDS |
| CGGAGAACCAAAGCCACTTT+TGG | 0.336599 | 1_3:-75645120 | None:intergenic |
| CAATAGCAACGGTGGCATAA+AGG | 0.343596 | 1_3:+75643114 | Msa0140960:CDS |
| AAGACGCCCAAGAAAATAAT+TGG | 0.343596 | 1_3:+75645182 | Msa0140960:CDS |
| CTTGCATGGTAGTATTTACT+TGG | 0.344961 | 1_3:-75645383 | None:intergenic |
| AGCAATGGGGTGGCAAGTTC+AGG | 0.353690 | 1_3:+75641717 | Msa0140960:CDS |
| GGCAGATGGCACAGATTGTT+TGG | 0.353964 | 1_3:+75645004 | Msa0140960:CDS |
| TATCAATTCTCGAGCTTCTT+CGG | 0.369040 | 1_3:-75641202 | None:intergenic |
| CATGCAGATGTCATGCAAAA+TGG | 0.370222 | 1_3:+75643373 | Msa0140960:CDS |
| AATAGCAACGGTGGCATAAA+GGG | 0.373977 | 1_3:+75643115 | Msa0140960:CDS |
| GATGAAGGAATGGAAAATTC+TGG | 0.374580 | 1_3:+75640892 | Msa0140960:CDS |
| TGCACAAAATGTAAAATAGT+TGG | 0.378978 | 1_3:-75645898 | None:intergenic |
| TGCTTGCGCCCATAGACATT+GGG | 0.379300 | 1_3:+75643054 | Msa0140960:CDS |
| AATTGCACCAAAAGTGGCTT+TGG | 0.383099 | 1_3:+75645113 | Msa0140960:CDS |
| AGAACACGAACTGAAGCTAA+TGG | 0.383795 | 1_3:+75643349 | Msa0140960:CDS |
| TGGTTGATATGAAATTTAAT+TGG | 0.388018 | 1_3:+75646094 | Msa0140960:three_prime_UTR |
| GCGGGTTTGATTCTGGTGAT+GGG | 0.392166 | 1_3:+75641739 | Msa0140960:CDS |
| GAACCCTTAGATGCAACTTT+AGG | 0.398563 | 1_3:+75643019 | Msa0140960:CDS |
| GGCGGGTTTGATTCTGGTGA+TGG | 0.398942 | 1_3:+75641738 | Msa0140960:CDS |
| ATTTCCACACACTTTGCAAC+TGG | 0.404987 | 1_3:-75645309 | None:intergenic |
| AATTCAAATGACAGCTATGA+TGG | 0.407363 | 1_3:+75645254 | Msa0140960:CDS |
| ATGTCCTCTTCTACTCAAAC+TGG | 0.415846 | 1_3:-75645802 | None:intergenic |
| TCAAGTGTTTCCTCATTTGT+AGG | 0.422038 | 1_3:-75645218 | None:intergenic |
| ACTTCTAAAATTGGCAAAGA+TGG | 0.424552 | 1_3:+75643289 | Msa0140960:CDS |
| ATTCTATTCCACAAGGGAAA+TGG | 0.427545 | 1_3:+75645564 | Msa0140960:CDS |
| AGCAAGCAATTAAATTCATA+TGG | 0.427904 | 1_3:+75645416 | Msa0140960:CDS |
| CTGCCAATTTCCAGTGGAAA+TGG | 0.430557 | 1_3:+75640973 | Msa0140960:CDS |
| ATTAACTGCAAGCTCAATAC+AGG | 0.436129 | 1_3:-75645060 | None:intergenic |
| AAACGGAAAGCCATTGATGA+TGG | 0.439899 | 1_3:+75640949 | Msa0140960:CDS |
| AAGTTGTGCCACTACAGTTA+TGG | 0.448873 | 1_3:+75643168 | Msa0140960:CDS |
| AAACAGTTATACCAGTCATT+AGG | 0.449339 | 1_3:+75643091 | Msa0140960:CDS |
| TTCAACAACACCATTTCCAC+TGG | 0.450246 | 1_3:-75640983 | None:intergenic |
| GATAAAACGGTGGTTGCAAA+TGG | 0.455540 | 1_3:+75641168 | Msa0140960:CDS |
| TATGATATGTCGAGTTCAAA+AGG | 0.457226 | 1_3:+75641807 | Msa0140960:CDS |
| GTGGCATAAAGGGGTGCATA+GGG | 0.459281 | 1_3:+75643125 | Msa0140960:CDS |
| ATGAAATACCTCACAAAAGC+TGG | 0.459967 | 1_3:+75645081 | Msa0140960:CDS |
| GATAGAACAGTGGTTGCAAA+TGG | 0.465872 | 1_3:+75641369 | Msa0140960:CDS |
| GTTGCAGTAGTTGTGGAGAA+AGG | 0.469797 | 1_3:+75644982 | Msa0140960:CDS |
| AAAAGTGAAGCTTTGAATGA+TGG | 0.470293 | 1_3:+75641567 | Msa0140960:CDS |
| GCACAAAATGTAAAATAGTT+GGG | 0.470521 | 1_3:-75645897 | None:intergenic |
| CGTGTCTTCGAACTTATAAA+AGG | 0.471775 | 1_3:+75641778 | Msa0140960:CDS |
| ATAGAAAGACCGAACTATAG+AGG | 0.474204 | 1_3:+75645991 | Msa0140960:three_prime_UTR |
| GAACACGAACTGAAGCTAAT+GGG | 0.474785 | 1_3:+75643350 | Msa0140960:CDS |
| TGCTATCTGCAAGAGCAAAT+AGG | 0.477698 | 1_3:+75646051 | Msa0140960:three_prime_UTR |
| CAAGTGTTTCCTCATTTGTA+GGG | 0.478626 | 1_3:-75645217 | None:intergenic |
| GATGGGGCGGTGACTGTGAA+TGG | 0.480902 | 1_3:+75641441 | Msa0140960:CDS |
| TTTCTTGTCAGATATTCAAC+AGG | 0.483829 | 1_3:+75643597 | Msa0140960:CDS |
| GATGGGATTCAAATATCTAC+AGG | 0.484106 | 1_3:+75645272 | Msa0140960:CDS |
| CTTGATCGGTGAAACAAACT+TGG | 0.484688 | 1_3:-75645469 | None:intergenic |
| TGTGCTAATTGCACCAAAAG+TGG | 0.484731 | 1_3:+75645107 | Msa0140960:CDS |
| ATAAGCAAAGCTGTAAATGA+TGG | 0.485126 | 1_3:+75641222 | Msa0140960:CDS |
| CAAGCTCAATACAGGACAAA+TGG | 0.489736 | 1_3:-75645052 | None:intergenic |
| CTATTGCATGAAGCCTCCAC+TGG | 0.492713 | 1_3:+75645541 | Msa0140960:CDS |
| AAAATGTGATGCTGGAATCA+AGG | 0.493152 | 1_3:+75645595 | Msa0140960:CDS |
| AGTTTGAGTAATGGGGTGAA+TGG | 0.499085 | 1_3:+75641297 | Msa0140960:CDS |
| CTGCAGAACCATTTCCCTTG+TGG | 0.500761 | 1_3:-75645572 | None:intergenic |
| TCACATGAAACCGGAGCAAA+CGG | 0.502221 | 1_3:+75644947 | Msa0140960:CDS |
| AAAGTGAAGGCGTTAGCAAT+GGG | 0.502272 | 1_3:+75641703 | Msa0140960:intron |
| CACGTTTCCCCAATGTCTAT+GGG | 0.502913 | 1_3:-75643062 | None:intergenic |
| GAGAGTAACAAGCTGAGAAC+CGG | 0.505763 | 1_3:+75645644 | Msa0140960:CDS |
| TAGTGTTGCTGACGTGGCCG+AGG | 0.508075 | 1_3:+75641065 | Msa0140960:CDS |
| ATTGGACTCTCACATGAAAC+CGG | 0.511216 | 1_3:+75644938 | Msa0140960:CDS |
| ATGTTATGTATCCAAAAGTC+AGG | 0.512995 | 1_3:-75645970 | None:intergenic |
| AATTGGCAGCCCATCATCAA+TGG | 0.516250 | 1_3:-75640959 | None:intergenic |
| TGGAAATTGTGTTGCTGAAG+AGG | 0.521184 | 1_3:+75641116 | Msa0140960:CDS |
| GCACATTCTTCCGTTTGCTC+CGG | 0.522582 | 1_3:-75644957 | None:intergenic |
| ATGCTTGCGCCCATAGACAT+TGG | 0.523175 | 1_3:+75643053 | Msa0140960:CDS |
| ATGGGGTGGCAAGTTCAGGC+GGG | 0.526120 | 1_3:+75641721 | Msa0140960:CDS |
| AATAATGGGGTGAATGGAAA+TGG | 0.529688 | 1_3:+75641654 | Msa0140960:CDS |
| ACAAGTGAAGCTGTGAATGA+TGG | 0.530250 | 1_3:+75641423 | Msa0140960:CDS |
| TAAATTCATATGGCTATTGG+TGG | 0.530362 | 1_3:+75645426 | Msa0140960:CDS |
| TGGAAATTGTGTTGCTGAAG+AGG | 0.532708 | 1_3:+75641317 | Msa0140960:CDS |
| AACAGATTCCTACTCTAAGC+TGG | 0.532828 | 1_3:+75644066 | Msa0140960:CDS |
| TTGCAGTAGTTGTGGAGAAA+GGG | 0.532833 | 1_3:+75644983 | Msa0140960:CDS |
| CAAACTTGGCATATACAAGA+AGG | 0.533043 | 1_3:-75645455 | None:intergenic |
| TTTGAAAAGTTTGAGTAATG+GGG | 0.533151 | 1_3:+75641290 | Msa0140960:CDS |
| GGTGGCATAAAGGGGTGCAT+AGG | 0.533505 | 1_3:+75643124 | Msa0140960:CDS |
| TTTGATATGGAAACTGATGA+AGG | 0.533844 | 1_3:+75640877 | None:intergenic |
| GAATGATGTGGCAGTGTTCG+CGG | 0.536335 | 1_3:+75641035 | Msa0140960:CDS |
| TGGCTTTGAAACATATTCAC+CGG | 0.536546 | 1_3:-75645663 | None:intergenic |
| TTCTGCAGAAAATGTGATGC+TGG | 0.537338 | 1_3:+75645587 | Msa0140960:CDS |
| AAGGAGTACGGTGTTTGAAA+CGG | 0.540338 | 1_3:+75640932 | Msa0140960:CDS |
| TTTGTTTACCAGCTTAGAGT+AGG | 0.543743 | 1_3:-75644074 | None:intergenic |
| AATGGGGTGGCAAGTTCAGG+CGG | 0.544330 | 1_3:+75641720 | Msa0140960:CDS |
| TGAAGGATTTGTGAGCGTCC+CGG | 0.544652 | 1_3:+75645834 | Msa0140960:three_prime_UTR |
| TGGAAATTGTGTTACTGAAG+AGG | 0.545167 | 1_3:+75641389 | Msa0140960:CDS |
| CAAGTGAAGCTGTGAATGAT+GGG | 0.546040 | 1_3:+75641424 | Msa0140960:CDS |
| AATGGTGTTAATGAAGAGGT+TGG | 0.546169 | 1_3:+75641537 | Msa0140960:CDS |
| TCACAGATTGTCCTCTGTGA+TGG | 0.547419 | 1_3:+75645497 | Msa0140960:CDS |
| CGGGTTTGATTCTGGTGATG+GGG | 0.548008 | 1_3:+75641740 | Msa0140960:CDS |
| GGTAACACTGAATGTGTTGA+AGG | 0.548932 | 1_3:+75640913 | Msa0140960:CDS |
| TAAGCAAAGCTGTAAATGAT+GGG | 0.549795 | 1_3:+75641223 | Msa0140960:CDS |
| TTGCCTAAAGTTGCATCTAA+GGG | 0.550508 | 1_3:-75643022 | None:intergenic |
| GGCAAAGCGCAGGAGGATTG+TGG | 0.550958 | 1_3:+75641828 | Msa0140960:CDS |
| AATTTAATTCCAGGTTGTGA+AGG | 0.553097 | 1_3:+75642997 | Msa0140960:intron |
| TAATTTCCAATCAACGAAGC+CGG | 0.553155 | 1_3:+75643504 | Msa0140960:CDS |
| AAAAGTGAAGGCGTTAGCAA+TGG | 0.553778 | 1_3:+75641702 | Msa0140960:intron |
| TTGCTGAAGAGGCTCGAGAA+TGG | 0.554844 | 1_3:+75641127 | Msa0140960:CDS |
| ATTGGAAAGTTGTGGTGGAA+TGG | 0.555146 | 1_3:+75645724 | Msa0140960:CDS |
| GTGTTTCCTCATTTGTAGGG+AGG | 0.556738 | 1_3:-75645214 | None:intergenic |
| CGTTGCTATTGCCTAATGAC+TGG | 0.558108 | 1_3:-75643102 | None:intergenic |
| CAAGTAAATACTACCATGCA+AGG | 0.564311 | 1_3:+75645384 | Msa0140960:CDS |
| TTCAAAAGGCAAAGCGCAGG+AGG | 0.564688 | 1_3:+75641821 | Msa0140960:CDS |
| TGCTTGTCAAACACCTTGCA+TGG | 0.566896 | 1_3:-75645397 | None:intergenic |
| ATAAGTGAAGCTGTGAATGA+TGG | 0.569988 | 1_3:+75641495 | Msa0140960:CDS |
| TGAAGCTGTGAATGATAAAA+CGG | 0.572722 | 1_3:+75641155 | Msa0140960:CDS |
| GGTCTGTGATTCATGTGAGA+AGG | 0.572726 | 1_3:+75645025 | Msa0140960:CDS |
| ATATCTGACAAGAAAAGTGC+AGG | 0.573143 | 1_3:-75643589 | None:intergenic |
| TATGGAAACTGATGAAGGAA+TGG | 0.575163 | 1_3:+75640882 | None:intergenic |
| AAAGTGAAGCTTTGAATGAT+GGG | 0.575332 | 1_3:+75641568 | Msa0140960:CDS |
| AATGGTGTTACTGAAGAGGC+TGG | 0.578173 | 1_3:+75641672 | Msa0140960:CDS |
| TCTAGTGAACCACATGGCCA+TGG | 0.579291 | 1_3:+75643400 | Msa0140960:CDS |
| AAAACCAGTTTGAGTAGAAG+AGG | 0.579344 | 1_3:+75645798 | Msa0140960:exon |
| GTAGAAGAATTGGAAAGTTG+TGG | 0.580155 | 1_3:+75645716 | Msa0140960:CDS |
| GGGTTTGATTCTGGTGATGG+GGG | 0.584023 | 1_3:+75641741 | Msa0140960:CDS |
| AATCTGTGAATCATCTTGAT+CGG | 0.585683 | 1_3:-75645483 | None:intergenic |
| TGCGAGTCATATAGCAGACC+AGG | 0.586766 | 1_3:+75641866 | Msa0140960:CDS |
| TAAGTGAAGCTGTGAATGAT+GGG | 0.589176 | 1_3:+75641496 | Msa0140960:CDS |
| GAGCAAACGGAAGAATGTGC+TGG | 0.593210 | 1_3:+75644960 | Msa0140960:CDS |
| TAGAAAGACCGAACTATAGA+GGG | 0.595505 | 1_3:+75645992 | Msa0140960:three_prime_UTR |
| GGAAATGAAGTCGAAATCAA+AGG | 0.596227 | 1_3:+75645326 | Msa0140960:CDS |
| TGGAATCAAGGCAATATCCC+AGG | 0.601104 | 1_3:+75645607 | Msa0140960:CDS |
| AGTTGTGGAGAAAGGGCAGA+TGG | 0.602720 | 1_3:+75644990 | Msa0140960:CDS |
| TGGAAGTAGTGTTGCTGACG+TGG | 0.604165 | 1_3:+75641059 | Msa0140960:CDS |
| CTGAATGTGTTGAAGGAGTA+CGG | 0.606436 | 1_3:+75640920 | Msa0140960:CDS |
| CCACTGGATTCTATTCCACA+AGG | 0.609700 | 1_3:+75645557 | Msa0140960:CDS |
| TGAAAGCCTCCCTACAAATG+AGG | 0.610172 | 1_3:+75645208 | Msa0140960:CDS |
| TCAGATACTGTAGTATAATG+TGG | 0.612569 | 1_3:+75646074 | Msa0140960:three_prime_UTR |
| TGTGCTGGTTGCAGTAGTTG+TGG | 0.613672 | 1_3:+75644975 | Msa0140960:CDS |
| GATGTGGCAGTGTTCGCGGA+TGG | 0.614770 | 1_3:+75641039 | Msa0140960:CDS |
| ATTCAAATGACAGCTATGAT+GGG | 0.614798 | 1_3:+75645255 | Msa0140960:CDS |
| GAGTTCAAAAGGCAAAGCGC+AGG | 0.615828 | 1_3:+75641818 | Msa0140960:CDS |
| AACGGAAAGCCATTGATGAT+GGG | 0.616381 | 1_3:+75640950 | Msa0140960:CDS |
| AAACTTGGCATATACAAGAA+GGG | 0.621755 | 1_3:-75645454 | None:intergenic |
| AGTTTGAGTAGAAGAGGACA+TGG | 0.624860 | 1_3:+75645804 | Msa0140960:exon |
| AATCTGTTGATAAATTGGAA+AGG | 0.628911 | 1_3:-75644051 | None:intergenic |
| CCTTGTGGAATAGAATCCAG+TGG | 0.629042 | 1_3:-75645557 | None:intergenic |
| AAAGCCAGTTGCAAAGTGTG+TGG | 0.629925 | 1_3:+75645305 | Msa0140960:CDS |
| AGAACCAACCATAACTGTAG+TGG | 0.635174 | 1_3:-75643176 | None:intergenic |
| GGAGGATTGTGGAAAACGCG+TGG | 0.644673 | 1_3:+75641839 | Msa0140960:CDS |
| ATAGCAACGGTGGCATAAAG+GGG | 0.646650 | 1_3:+75643116 | Msa0140960:CDS |
| GAAGAATTGGAAAGTTGTGG+TGG | 0.646905 | 1_3:+75645719 | Msa0140960:CDS |
| TGGAAATGGTGTTAATGAAG+AGG | 0.653182 | 1_3:+75641533 | Msa0140960:CDS |
| TGGAAATGGTGTTACTGAAG+AGG | 0.653468 | 1_3:+75641668 | Msa0140960:CDS |
| TAGTGTTGCTGATGTAGCTG+AGG | 0.653985 | 1_3:+75641266 | Msa0140960:intron |
| CCATAGACATTGGGGAAACG+TGG | 0.654448 | 1_3:+75643063 | Msa0140960:CDS |
| AAGCAAAGCTGTAAATGATG+GGG | 0.657012 | 1_3:+75641224 | Msa0140960:CDS |
| TGGCATAAAGGGGTGCATAG+GGG | 0.660436 | 1_3:+75643126 | Msa0140960:CDS |
| CACTGGATTCTATTCCACAA+GGG | 0.660534 | 1_3:+75645558 | Msa0140960:CDS |
| TGAAGCTTTGAATGATGGGG+TGG | 0.661073 | 1_3:+75641572 | Msa0140960:CDS |
| AAGTGAAGCTTTGAATGATG+TGG | 0.661777 | 1_3:+75641023 | Msa0140960:CDS |
| GCTTGCGCCCATAGACATTG+GGG | 0.661929 | 1_3:+75643055 | Msa0140960:CDS |
| GGGATTCAAATATCTACAGG+TGG | 0.662223 | 1_3:+75645275 | Msa0140960:CDS |
| AGTCATTACTAACAATAACC+GGG | 0.662716 | 1_3:-75645852 | None:intergenic |
| TGAAGGCGTTAGCAATGGGG+TGG | 0.665346 | 1_3:+75641707 | Msa0140960:intron |
| GTTTGAGTAGAAGAGGACAT+GGG | 0.670972 | 1_3:+75645805 | Msa0140960:exon |
| TCATTAGGCAATAGCAACGG+TGG | 0.676791 | 1_3:+75643106 | Msa0140960:CDS |
| TCAGTCACACCATGGCCATG+TGG | 0.677510 | 1_3:-75643409 | None:intergenic |
| GATGGGCTGCCAATTTCCAG+TGG | 0.678771 | 1_3:+75640967 | Msa0140960:CDS |
| GACACATCTCAGTCACACCA+TGG | 0.687163 | 1_3:-75643417 | None:intergenic |
| CAGTCATTAGGCAATAGCAA+CGG | 0.704631 | 1_3:+75643103 | Msa0140960:CDS |
| AAGTGAAGGCGTTAGCAATG+GGG | 0.707830 | 1_3:+75641704 | Msa0140960:intron |
| TGAAGCTGTGAATGATGGGG+CGG | 0.720681 | 1_3:+75641428 | Msa0140960:CDS |
| AAGTGAAGCTTTGAATGATG+GGG | 0.721200 | 1_3:+75641569 | Msa0140960:CDS |
| AAAATTGTGTAGTATGTGCG+AGG | 0.724793 | 1_3:+75645147 | Msa0140960:CDS |
| TGTGGAATAGAATCCAGTGG+AGG | 0.728511 | 1_3:-75645554 | None:intergenic |
| GGATCTTCTAGTGAACCACA+TGG | 0.728648 | 1_3:+75643394 | Msa0140960:CDS |
| AAGTGAAGCTGTGAATGATG+GGG | 0.733403 | 1_3:+75641425 | Msa0140960:CDS |
| AAGTGAAGCTGTGAATGATG+GGG | 0.738141 | 1_3:+75641497 | Msa0140960:CDS |
| AGCTGTGAATGATAGAACAG+TGG | 0.756051 | 1_3:+75641359 | Msa0140960:CDS |
| CATGATCGCAGCCATCACAG+AGG | 0.758503 | 1_3:-75645508 | None:intergenic |
| AGCTGTGAATGATAAAACGG+TGG | 0.781043 | 1_3:+75641158 | Msa0140960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAAATTTAATTCC+AGG | + | chr1_3:75642988-75643007 | Msa0140960:intron | 10.0% |
| !! | TAACTTAATTCTATATTAAA+TGG | - | chr1_3:75644672-75644691 | None:intergenic | 10.0% |
| !! | ATATTTACTAAAATGAAAAT+GGG | + | chr1_3:75644870-75644889 | Msa0140960:intron | 10.0% |
| !!! | TTTTGAAAAGTTTGAAAAAT+GGG | + | chr1_3:75641088-75641107 | Msa0140960:CDS | 15.0% |
| !!! | ACACTTTATTTATTCATATA+TGG | + | chr1_3:75643648-75643667 | Msa0140960:intron | 15.0% |
| !!! | AAGAAATGTAATCATTTTTA+GGG | - | chr1_3:75644466-75644485 | None:intergenic | 15.0% |
| !! | GATATTTACTAAAATGAAAA+TGG | + | chr1_3:75644869-75644888 | Msa0140960:intron | 15.0% |
| !!! | GTTTTGAAAAGTTTGAAAAA+TGG | + | chr1_3:75641087-75641106 | Msa0140960:CDS | 20.0% |
| !! | TTTGAAAAGTTTGAAAAATG+GGG | + | chr1_3:75641089-75641108 | Msa0140960:CDS | 20.0% |
| !!! | TTTTGAAAAGTTTGAGTAAT+GGG | + | chr1_3:75641289-75641308 | Msa0140960:CDS | 20.0% |
| !!! | AAAAGTGATGTTTTGAATAA+TGG | + | chr1_3:75641639-75641658 | Msa0140960:CDS | 20.0% |
| !!! | AAAGTGATGTTTTGAATAAT+GGG | + | chr1_3:75641640-75641659 | Msa0140960:CDS | 20.0% |
| !!! | AATAAACATTAGCATTTTTC+TGG | - | chr1_3:75641980-75641999 | None:intergenic | 20.0% |
| !!! | TACTTTTGCTTTATTTATGT+TGG | + | chr1_3:75642458-75642477 | Msa0140960:intron | 20.0% |
| !!! | ACTTTTGCTTTATTTATGTT+GGG | + | chr1_3:75642459-75642478 | Msa0140960:intron | 20.0% |
| !! | TATTCCAATATGTAGAAATT+TGG | + | chr1_3:75642623-75642642 | Msa0140960:intron | 20.0% |
| !! | TATTGTACTTATGATGAAAA+GGG | - | chr1_3:75642832-75642851 | None:intergenic | 20.0% |
| !! | ATATTGTACTTATGATGAAA+AGG | - | chr1_3:75642833-75642852 | None:intergenic | 20.0% |
| !!! | TAATGAATTGAATTTTTCTG+AGG | - | chr1_3:75643467-75643486 | None:intergenic | 20.0% |
| !! | AAAATTCAATTCATTATGCA+AGG | + | chr1_3:75643471-75643490 | Msa0140960:intron | 20.0% |
| !! | CTAAAATCAAATATTCTTTC+CGG | - | chr1_3:75643526-75643545 | None:intergenic | 20.0% |
| !!! | CTTTATTTATTCATATATGG+TGG | + | chr1_3:75643651-75643670 | Msa0140960:intron | 20.0% |
| !! | ATAAATAGCATTAAACATTG+AGG | - | chr1_3:75643826-75643845 | None:intergenic | 20.0% |
| !!! | GTTATTTTAGTATTGTTTGA+GGG | + | chr1_3:75643905-75643924 | Msa0140960:intron | 20.0% |
| !! | ATATTTGCTCAGTATAATAA+AGG | - | chr1_3:75644434-75644453 | None:intergenic | 20.0% |
| !!! | GAAGAAATGTAATCATTTTT+AGG | - | chr1_3:75644467-75644486 | None:intergenic | 20.0% |
| !! | TTGAAATTTGAAGACATTTA+AGG | + | chr1_3:75644513-75644532 | Msa0140960:intron | 20.0% |
| !!! | AATGAAAATGGGAATTATTT+TGG | + | chr1_3:75644881-75644900 | Msa0140960:intron | 20.0% |
| !! | AATTAAATTCATATGGCTAT+TGG | + | chr1_3:75645423-75645442 | Msa0140960:CDS | 20.0% |
| !!! | TTTACATTTTGTGCATTTTT+TGG | + | chr1_3:75645906-75645925 | Msa0140960:three_prime_UTR | 20.0% |
| !!! | TGGTTGATATGAAATTTAAT+TGG | + | chr1_3:75646094-75646113 | Msa0140960:three_prime_UTR | 20.0% |
| !! | TTTCAAACTTTTCAAAACCT+CGG | - | chr1_3:75641085-75641104 | None:intergenic | 25.0% |
| !!! | GTTTTGAAAAGTTTGAGTAA+TGG | + | chr1_3:75641288-75641307 | Msa0140960:CDS | 25.0% |
| ! | TTTGAAAAGTTTGAGTAATG+GGG | + | chr1_3:75641290-75641309 | Msa0140960:CDS | 25.0% |
| !!! | ACATCACTTTTTAAAACTAC+AGG | - | chr1_3:75641630-75641649 | None:intergenic | 25.0% |
| !!! | AAGTGATGTTTTGAATAATG+GGG | + | chr1_3:75641641-75641660 | Msa0140960:CDS | 25.0% |
| ! | TTGAAAAAAACAAACAAAGC+AGG | - | chr1_3:75641900-75641919 | None:intergenic | 25.0% |
| ! | TATAAGCAACTCTATATAGT+GGG | - | chr1_3:75642101-75642120 | None:intergenic | 25.0% |
| ! | ATATAAGCAACTCTATATAG+TGG | - | chr1_3:75642102-75642121 | None:intergenic | 25.0% |
| !!! | AGTTCACAAATTTAATTTGC+AGG | - | chr1_3:75642199-75642218 | None:intergenic | 25.0% |
| ! | TATACTTGATCTTATTGATC+AGG | + | chr1_3:75642392-75642411 | Msa0140960:intron | 25.0% |
| ! | TTTATTCTGTGCTTAAATAG+AGG | + | chr1_3:75642529-75642548 | Msa0140960:intron | 25.0% |
| ! | AAAGCCAAATTTCTACATAT+TGG | - | chr1_3:75642630-75642649 | None:intergenic | 25.0% |
| !!! | GCTATTTCTTTGTATTGTAT+AGG | + | chr1_3:75642657-75642676 | Msa0140960:intron | 25.0% |
| ! | AATGACATGATATAACATTC+AGG | + | chr1_3:75642711-75642730 | Msa0140960:intron | 25.0% |
| ! | ACAGATCTTAAGAAATAACT+AGG | - | chr1_3:75642965-75642984 | None:intergenic | 25.0% |
| ! | AAGTTGGAACTTAAAATTGA+AGG | - | chr1_3:75643253-75643272 | None:intergenic | 25.0% |
| !!! | TTTTAAGTTCCAACTTACTT+TGG | + | chr1_3:75643257-75643276 | Msa0140960:intron | 25.0% |
| !!! | ATTTTAGTGTCATAACCTTA+AGG | + | chr1_3:75643539-75643558 | Msa0140960:CDS | 25.0% |
| ! | CAAAATCATCAAACAAACTA+TGG | - | chr1_3:75643769-75643788 | None:intergenic | 25.0% |
| !!! | GGTTATTTTAGTATTGTTTG+AGG | + | chr1_3:75643904-75643923 | Msa0140960:intron | 25.0% |
| !! | CTATTCCTGATTTGTAATTT+AGG | + | chr1_3:75643976-75643995 | Msa0140960:intron | 25.0% |
| ! | AAAGACCTAAATTACAAATC+AGG | - | chr1_3:75643984-75644003 | None:intergenic | 25.0% |
| !! | TGATTTGTAATTTAGGTCTT+TGG | + | chr1_3:75643983-75644002 | Msa0140960:intron | 25.0% |
| ! | AAAGCTTCAAGATACATTTA+AGG | + | chr1_3:75644006-75644025 | Msa0140960:CDS | 25.0% |
| !! | AATCTGTTGATAAATTGGAA+AGG | - | chr1_3:75644054-75644073 | None:intergenic | 25.0% |
| ! | ATTTGAAGATGAAAAACAAG+TGG | + | chr1_3:75644208-75644227 | Msa0140960:CDS | 25.0% |
| ! | AAAATTGATCAAACGTGAAT+AGG | + | chr1_3:75644602-75644621 | Msa0140960:intron | 25.0% |
| !! | TCATCACCAATTATTTTCTT+GGG | - | chr1_3:75645191-75645210 | None:intergenic | 25.0% |
| !! | TTCATCACCAATTATTTTCT+TGG | - | chr1_3:75645192-75645211 | None:intergenic | 25.0% |
| ! | GGTGAAAAAATAAGAATATG+TGG | + | chr1_3:75645347-75645366 | Msa0140960:CDS | 25.0% |
| ! | AGTATTTACTTGGACAAAAA+GGG | - | chr1_3:75645376-75645395 | None:intergenic | 25.0% |
| ! | TAGTATTTACTTGGACAAAA+AGG | - | chr1_3:75645377-75645396 | None:intergenic | 25.0% |
| ! | AGCAAGCAATTAAATTCATA+TGG | + | chr1_3:75645416-75645435 | Msa0140960:CDS | 25.0% |
| ! | CAGTAAATTTGTAGAAGAAT+TGG | + | chr1_3:75645706-75645725 | Msa0140960:CDS | 25.0% |
| !!! | TCTGAATTTTGAAGAGAATT+TGG | + | chr1_3:75645772-75645791 | Msa0140960:CDS | 25.0% |
| ! | AAGTCATTACTAACAATAAC+CGG | - | chr1_3:75645856-75645875 | None:intergenic | 25.0% |
| ! | GCACAAAATGTAAAATAGTT+GGG | - | chr1_3:75645900-75645919 | None:intergenic | 25.0% |
| ! | TGCACAAAATGTAAAATAGT+TGG | - | chr1_3:75645901-75645920 | None:intergenic | 25.0% |
| AAAAGTTTGAAAAATGGGGT+GGG | + | chr1_3:75641093-75641112 | Msa0140960:CDS | 30.0% | |
| TGAAGCTGTGAATGATAAAA+CGG | + | chr1_3:75641155-75641174 | Msa0140960:CDS | 30.0% | |
| ATAAGCAAAGCTGTAAATGA+TGG | + | chr1_3:75641222-75641241 | Msa0140960:CDS | 30.0% | |
| TAAGCAAAGCTGTAAATGAT+GGG | + | chr1_3:75641223-75641242 | Msa0140960:CDS | 30.0% | |
| !! | AAAAGTGAAGCTTTGAATGA+TGG | + | chr1_3:75641567-75641586 | Msa0140960:CDS | 30.0% |
| !! | AAAGTGAAGCTTTGAATGAT+GGG | + | chr1_3:75641022-75641041 | Msa0140960:CDS | 30.0% |
| ! | TGGTGTTTTCAAATGGAAAT+GGG | + | chr1_3:75641592-75641611 | Msa0140960:CDS | 30.0% |
| TATGATATGTCGAGTTCAAA+AGG | + | chr1_3:75641807-75641826 | Msa0140960:CDS | 30.0% | |
| TGTACCTATGATTCCAAAAT+GGG | + | chr1_3:75641931-75641950 | Msa0140960:intron | 30.0% | |
| !! | AGCTACATTTTGGTAACTTT+AGG | + | chr1_3:75642171-75642190 | Msa0140960:intron | 30.0% |
| CATGTTAACTAGAATTGCAT+AGG | - | chr1_3:75642321-75642340 | None:intergenic | 30.0% | |
| CATCAAAACAGAATAGATAC+CGG | - | chr1_3:75642505-75642524 | None:intergenic | 30.0% | |
| ATTCTAAATATGCAGGACAT+AGG | - | chr1_3:75642572-75642591 | None:intergenic | 30.0% | |
| TATGTCCTGCATATTTAGAA+TGG | + | chr1_3:75642571-75642590 | Msa0140960:intron | 30.0% | |
| TAAGCCATATTGATATGCAT+TGG | + | chr1_3:75642742-75642761 | Msa0140960:intron | 30.0% | |
| AAGCCATATTGATATGCATT+GGG | + | chr1_3:75642743-75642762 | Msa0140960:intron | 30.0% | |
| AGACATTAACATTCTGTTTC+TGG | + | chr1_3:75642905-75642924 | Msa0140960:intron | 30.0% | |
| AATTTAATTCCAGGTTGTGA+AGG | + | chr1_3:75642997-75643016 | Msa0140960:intron | 30.0% | |
| AAACAGTTATACCAGTCATT+AGG | + | chr1_3:75643091-75643110 | Msa0140960:CDS | 30.0% | |
| !! | ACTTCTAAAATTGGCAAAGA+TGG | + | chr1_3:75643289-75643308 | Msa0140960:CDS | 30.0% |
| TTTCTTGTCAGATATTCAAC+AGG | + | chr1_3:75643597-75643616 | Msa0140960:CDS | 30.0% | |
| TGCTAGTAGAAATCGTAATA+TGG | + | chr1_3:75643874-75643893 | Msa0140960:intron | 30.0% | |
| AAATCGTAATATGGTTCACT+GGG | + | chr1_3:75643883-75643902 | Msa0140960:intron | 30.0% | |
| !!! | TTGCTGGTTCTTATTTTGTA+TGG | + | chr1_3:75643953-75643972 | Msa0140960:intron | 30.0% |
| ! | GTAGGAATCTGTTGATAAAT+TGG | - | chr1_3:75644059-75644078 | None:intergenic | 30.0% |
| TTAGACAAAGGTAAGCAAAT+AGG | - | chr1_3:75644142-75644161 | None:intergenic | 30.0% | |
| TGCTCAGTATAATAAAGGAA+AGG | - | chr1_3:75644429-75644448 | None:intergenic | 30.0% | |
| GAATAGGCAATTAAATGTAC+AGG | + | chr1_3:75644618-75644637 | Msa0140960:intron | 30.0% | |
| CTTATTCAAGCAAATCCTTA+AGG | - | chr1_3:75644707-75644726 | None:intergenic | 30.0% | |
| ATTATTTGCATCATGGACAT+AGG | - | chr1_3:75644773-75644792 | None:intergenic | 30.0% | |
| ACAACAGATTATTTGCATCA+TGG | - | chr1_3:75644780-75644799 | None:intergenic | 30.0% | |
| ATGCAAATAATCTGTTGTAC+TGG | + | chr1_3:75644782-75644801 | Msa0140960:intron | 30.0% | |
| TGCAAATAATCTGTTGTACT+GGG | + | chr1_3:75644783-75644802 | Msa0140960:intron | 30.0% | |
| TTTGATACTCATAAATGGAC+AGG | - | chr1_3:75644814-75644833 | None:intergenic | 30.0% | |
| CTGCATTTGATACTCATAAA+TGG | - | chr1_3:75644819-75644838 | None:intergenic | 30.0% | |
| CAGTTCATTTGATATGCTTA+AGG | + | chr1_3:75644836-75644855 | Msa0140960:intron | 30.0% | |
| ! | GTTAATCAGTTCTTTTTACC+AGG | + | chr1_3:75644914-75644933 | Msa0140960:intron | 30.0% |
| ! | CATACTACACAATTTTCATG+CGG | - | chr1_3:75645143-75645162 | None:intergenic | 30.0% |
| AATTCAAATGACAGCTATGA+TGG | + | chr1_3:75645254-75645273 | Msa0140960:CDS | 30.0% | |
| ATTCAAATGACAGCTATGAT+GGG | + | chr1_3:75645255-75645274 | Msa0140960:CDS | 30.0% | |
| TAAATTCATATGGCTATTGG+TGG | + | chr1_3:75645426-75645445 | Msa0140960:CDS | 30.0% | |
| AAACTTGGCATATACAAGAA+GGG | - | chr1_3:75645457-75645476 | None:intergenic | 30.0% | |
| AATCTGTGAATCATCTTGAT+CGG | - | chr1_3:75645486-75645505 | None:intergenic | 30.0% | |
| ! | TTGCAGTTGTTATTAGCATT+TGG | - | chr1_3:75645686-75645705 | None:intergenic | 30.0% |
| CTCTTCAAAATTCAGAGAAT+TGG | - | chr1_3:75645768-75645787 | None:intergenic | 30.0% | |
| AGTCATTACTAACAATAACC+GGG | - | chr1_3:75645855-75645874 | None:intergenic | 30.0% | |
| ! | TTTTTGGATGACTGACATTT+TGG | + | chr1_3:75645922-75645941 | Msa0140960:three_prime_UTR | 30.0% |
| ! | TTGATAGATTTCCTGACTTT+TGG | + | chr1_3:75645959-75645978 | Msa0140960:three_prime_UTR | 30.0% |
| ATGTTATGTATCCAAAAGTC+AGG | - | chr1_3:75645973-75645992 | None:intergenic | 30.0% | |
| TATAGAGGGTAAAAAGCAAA+AGG | + | chr1_3:75646006-75646025 | Msa0140960:three_prime_UTR | 30.0% | |
| TCAGATACTGTAGTATAATG+TGG | + | chr1_3:75646074-75646093 | Msa0140960:three_prime_UTR | 30.0% | |
| !!! | AGTGTGTAGTATTTTGGTTT+GGG | + | chr1_3:75646137-75646156 | Msa0140960:three_prime_UTR | 30.0% |
| GATGAAGGAATGGAAAATTC+TGG | + | chr1_3:75640892-75640911 | Msa0140960:CDS | 35.0% | |
| !! | AAGTGAAGCTTTGAATGATG+TGG | + | chr1_3:75641023-75641042 | Msa0140960:CDS | 35.0% |
| GAAAAGTTTGAAAAATGGGG+TGG | + | chr1_3:75641092-75641111 | Msa0140960:CDS | 35.0% | |
| TATCAATTCTCGAGCTTCTT+CGG | - | chr1_3:75641205-75641224 | None:intergenic | 35.0% | |
| AAGCAAAGCTGTAAATGATG+GGG | + | chr1_3:75641224-75641243 | Msa0140960:CDS | 35.0% | |
| ATCAGCAACACTATTTCCAT+TGG | - | chr1_3:75641259-75641278 | None:intergenic | 35.0% | |
| ! | TGGAAATTGTGTTACTGAAG+AGG | + | chr1_3:75641389-75641408 | Msa0140960:CDS | 35.0% |
| ATAAGTGAAGCTGTGAATGA+TGG | + | chr1_3:75641150-75641169 | Msa0140960:CDS | 35.0% | |
| TAAGTGAAGCTGTGAATGAT+GGG | + | chr1_3:75641151-75641170 | Msa0140960:CDS | 35.0% | |
| ! | GCGATATTTTCGAATGGAAA+TGG | + | chr1_3:75641519-75641538 | Msa0140960:CDS | 35.0% |
| ! | TGGAAATGGTGTTAATGAAG+AGG | + | chr1_3:75641533-75641552 | Msa0140960:CDS | 35.0% |
| ! | AATGGTGTTAATGAAGAGGT+TGG | + | chr1_3:75641537-75641556 | Msa0140960:CDS | 35.0% |
| !! | AAGTGAAGCTTTGAATGATG+GGG | + | chr1_3:75641023-75641042 | Msa0140960:CDS | 35.0% |
| ! | GTGGTGTTTTCAAATGGAAA+TGG | + | chr1_3:75641591-75641610 | Msa0140960:CDS | 35.0% |
| ! | GGTGTTTTCAAATGGAAATG+GGG | + | chr1_3:75641593-75641612 | Msa0140960:CDS | 35.0% |
| !! | GTTTTGAATAATGGGGTGAA+TGG | + | chr1_3:75641648-75641667 | Msa0140960:CDS | 35.0% |
| ! | AATAATGGGGTGAATGGAAA+TGG | + | chr1_3:75641654-75641673 | Msa0140960:CDS | 35.0% |
| CGTGTCTTCGAACTTATAAA+AGG | + | chr1_3:75641778-75641797 | Msa0140960:CDS | 35.0% | |
| CTGTACCTATGATTCCAAAA+TGG | + | chr1_3:75641930-75641949 | Msa0140960:intron | 35.0% | |
| !!! | ATCACCCATTTTGGAATCAT+AGG | - | chr1_3:75641938-75641957 | None:intergenic | 35.0% |
| ATGATTCCAAAATGGGTGAT+TGG | + | chr1_3:75641938-75641957 | Msa0140960:intron | 35.0% | |
| TCTTCAACGTTCTTGATTTC+TGG | + | chr1_3:75642032-75642051 | Msa0140960:intron | 35.0% | |
| ! | AGAGTAAGCTAGCTACATTT+TGG | + | chr1_3:75642161-75642180 | Msa0140960:intron | 35.0% |
| AACTTCCACACGCAAAAATT+AGG | + | chr1_3:75642238-75642257 | Msa0140960:intron | 35.0% | |
| ! | ATGAACCTAATTTTTGCGTG+TGG | - | chr1_3:75642246-75642265 | None:intergenic | 35.0% |
| ! | ATCTAAAATCCGAGGTACTT+TGG | - | chr1_3:75642354-75642373 | None:intergenic | 35.0% |
| TTGAAACTTCAATTGCAAGC+TGG | + | chr1_3:75642424-75642443 | Msa0140960:intron | 35.0% | |
| AATGCCATGATAATATGCTC+CGG | + | chr1_3:75642483-75642502 | Msa0140960:intron | 35.0% | |
| !! | CGGTATCTATTCTGTTTTGA+TGG | + | chr1_3:75642503-75642522 | Msa0140960:intron | 35.0% |
| ! | TCCTGCATATTTAGAATGGT+GGG | + | chr1_3:75642575-75642594 | Msa0140960:intron | 35.0% |
| !! | TGTAGAAATTTGGCTTTACG+AGG | + | chr1_3:75642633-75642652 | Msa0140960:intron | 35.0% |
| !! | GTAGAAATTTGGCTTTACGA+GGG | + | chr1_3:75642634-75642653 | Msa0140960:intron | 35.0% |
| !! | TAGAAATTTGGCTTTACGAG+GGG | + | chr1_3:75642635-75642654 | Msa0140960:intron | 35.0% |
| ACACCCAATGCATATCAATA+TGG | - | chr1_3:75642749-75642768 | None:intergenic | 35.0% | |
| TTTCATAAAAGTCCTGCTGA+TGG | + | chr1_3:75642865-75642884 | Msa0140960:intron | 35.0% | |
| TTCATAAAAGTCCTGCTGAT+GGG | + | chr1_3:75642866-75642885 | Msa0140960:intron | 35.0% | |
| TTGCCTAAAGTTGCATCTAA+GGG | - | chr1_3:75643025-75643044 | None:intergenic | 35.0% | |
| ATTGCCTAAAGTTGCATCTA+AGG | - | chr1_3:75643026-75643045 | None:intergenic | 35.0% | |
| CGATAAGTCAAGTACATTAC+AGG | - | chr1_3:75643215-75643234 | None:intergenic | 35.0% | |
| TAATTTCCAATCAACGAAGC+CGG | + | chr1_3:75643504-75643523 | Msa0140960:CDS | 35.0% | |
| ! | ATATCTGACAAGAAAAGTGC+AGG | - | chr1_3:75643592-75643611 | None:intergenic | 35.0% |
| GAAATCGTAATATGGTTCAC+TGG | + | chr1_3:75643882-75643901 | Msa0140960:intron | 35.0% | |
| ATAAGAACCAGCAACTAACA+TGG | - | chr1_3:75643947-75643966 | None:intergenic | 35.0% | |
| TTTGTTTACCAGCTTAGAGT+AGG | - | chr1_3:75644077-75644096 | None:intergenic | 35.0% | |
| ! | GCAGATTGTTGATTAGACAA+AGG | - | chr1_3:75644154-75644173 | None:intergenic | 35.0% |
| !!! | AAGACACTGTTGTTTTGGTT+TGG | + | chr1_3:75644342-75644361 | Msa0140960:intron | 35.0% |
| GCATGTATCTCCAATACATA+TGG | - | chr1_3:75644402-75644421 | None:intergenic | 35.0% | |
| AACTGGTCAGTAATAGACTA+TGG | - | chr1_3:75644575-75644594 | None:intergenic | 35.0% | |
| ! | GATCAATTTTGCATGGAAAC+TGG | - | chr1_3:75644592-75644611 | None:intergenic | 35.0% |
| ! | CACGTTTGATCAATTTTGCA+TGG | - | chr1_3:75644599-75644618 | None:intergenic | 35.0% |
| TTATCAATTCCCAAGCCTTA+AGG | + | chr1_3:75644689-75644708 | Msa0140960:intron | 35.0% | |
| ! | AGGATTTGCTTGAATAAGAC+AGG | + | chr1_3:75644709-75644728 | Msa0140960:intron | 35.0% |
| ! | CAGTTCTTTTTACCAGGAAT+TGG | + | chr1_3:75644920-75644939 | Msa0140960:intron | 35.0% |
| ATTAACTGCAAGCTCAATAC+AGG | - | chr1_3:75645063-75645082 | None:intergenic | 35.0% | |
| ATGAAATACCTCACAAAAGC+TGG | + | chr1_3:75645081-75645100 | Msa0140960:CDS | 35.0% | |
| AAAATTGTGTAGTATGTGCG+AGG | + | chr1_3:75645147-75645166 | Msa0140960:CDS | 35.0% | |
| AAGACGCCCAAGAAAATAAT+TGG | + | chr1_3:75645182-75645201 | Msa0140960:CDS | 35.0% | |
| CAAGTGTTTCCTCATTTGTA+GGG | - | chr1_3:75645220-75645239 | None:intergenic | 35.0% | |
| TCAAGTGTTTCCTCATTTGT+AGG | - | chr1_3:75645221-75645240 | None:intergenic | 35.0% | |
| GATGGGATTCAAATATCTAC+AGG | + | chr1_3:75645272-75645291 | Msa0140960:CDS | 35.0% | |
| GGAAATGAAGTCGAAATCAA+AGG | + | chr1_3:75645326-75645345 | Msa0140960:CDS | 35.0% | |
| CTTGCATGGTAGTATTTACT+TGG | - | chr1_3:75645386-75645405 | None:intergenic | 35.0% | |
| CAAGTAAATACTACCATGCA+AGG | + | chr1_3:75645384-75645403 | Msa0140960:CDS | 35.0% | |
| CAAACTTGGCATATACAAGA+AGG | - | chr1_3:75645458-75645477 | None:intergenic | 35.0% | |
| ATTCTATTCCACAAGGGAAA+TGG | + | chr1_3:75645564-75645583 | Msa0140960:CDS | 35.0% | |
| AAAATGTGATGCTGGAATCA+AGG | + | chr1_3:75645595-75645614 | Msa0140960:CDS | 35.0% | |
| !! | TGGCTTTGAAACATATTCAC+CGG | - | chr1_3:75645666-75645685 | None:intergenic | 35.0% |
| GTAGAAGAATTGGAAAGTTG+TGG | + | chr1_3:75645716-75645735 | Msa0140960:CDS | 35.0% | |
| !! | AATGGACATGCTTTTAACTG+CGG | + | chr1_3:75645742-75645761 | Msa0140960:CDS | 35.0% |
| !!! | CTTCTACTCAAACTGGTTTT+CGG | - | chr1_3:75645798-75645817 | None:intergenic | 35.0% |
| AAAACCAGTTTGAGTAGAAG+AGG | + | chr1_3:75645798-75645817 | Msa0140960:exon | 35.0% | |
| ATAGAAAGACCGAACTATAG+AGG | + | chr1_3:75645991-75646010 | Msa0140960:three_prime_UTR | 35.0% | |
| TAGAAAGACCGAACTATAGA+GGG | + | chr1_3:75645992-75646011 | Msa0140960:three_prime_UTR | 35.0% | |
| ! | GCTTTTTACCCTCTATAGTT+CGG | - | chr1_3:75646003-75646022 | None:intergenic | 35.0% |
| ! | TCATGCAGTGTGTAGTATTT+TGG | + | chr1_3:75646131-75646150 | Msa0140960:three_prime_UTR | 35.0% |
| !!! | CAGTGTGTAGTATTTTGGTT+TGG | + | chr1_3:75646136-75646155 | Msa0140960:three_prime_UTR | 35.0% |
| GGTAACACTGAATGTGTTGA+AGG | + | chr1_3:75640913-75640932 | Msa0140960:CDS | 40.0% | |
| CTGAATGTGTTGAAGGAGTA+CGG | + | chr1_3:75640920-75640939 | Msa0140960:CDS | 40.0% | |
| ! | AAGGAGTACGGTGTTTGAAA+CGG | + | chr1_3:75640932-75640951 | Msa0140960:CDS | 40.0% |
| AAACGGAAAGCCATTGATGA+TGG | + | chr1_3:75640949-75640968 | Msa0140960:CDS | 40.0% | |
| ! | AACGGAAAGCCATTGATGAT+GGG | + | chr1_3:75640950-75640969 | Msa0140960:CDS | 40.0% |
| ACACCATTTCCACTGGAAAT+TGG | - | chr1_3:75640979-75640998 | None:intergenic | 40.0% | |
| TTCAACAACACCATTTCCAC+TGG | - | chr1_3:75640986-75641005 | None:intergenic | 40.0% | |
| !! | GGAAATGGTGTTGTTGAAGA+AGG | + | chr1_3:75640988-75641007 | Msa0140960:intron | 40.0% |
| !! | ATGGTGTTGTTGAAGAAGGT+AGG | + | chr1_3:75640992-75641011 | Msa0140960:intron | 40.0% |
| ! | TGGAAATTGTGTTGCTGAAG+AGG | + | chr1_3:75641116-75641135 | Msa0140960:CDS | 40.0% |
| AGCTGTGAATGATAAAACGG+TGG | + | chr1_3:75641158-75641177 | Msa0140960:CDS | 40.0% | |
| GATAAAACGGTGGTTGCAAA+TGG | + | chr1_3:75641168-75641187 | Msa0140960:CDS | 40.0% | |
| ! | AGTTTGAGTAATGGGGTGAA+TGG | + | chr1_3:75641297-75641316 | Msa0140960:CDS | 40.0% |
| ! | TGGAAATTGTGTTGCTGAAG+AGG | + | chr1_3:75641116-75641135 | Msa0140960:CDS | 40.0% |
| AGCTGTGAATGATAGAACAG+TGG | + | chr1_3:75641359-75641378 | Msa0140960:CDS | 40.0% | |
| GATAGAACAGTGGTTGCAAA+TGG | + | chr1_3:75641369-75641388 | Msa0140960:CDS | 40.0% | |
| ACAAGTGAAGCTGTGAATGA+TGG | + | chr1_3:75641423-75641442 | Msa0140960:CDS | 40.0% | |
| CAAGTGAAGCTGTGAATGAT+GGG | + | chr1_3:75641424-75641443 | Msa0140960:CDS | 40.0% | |
| AAGTGAAGCTGTGAATGATG+GGG | + | chr1_3:75641425-75641444 | Msa0140960:CDS | 40.0% | |
| ! | TGGAAGTTGTGTTGCTAAAG+AGG | + | chr1_3:75641461-75641480 | Msa0140960:intron | 40.0% |
| AAGTGAAGCTGTGAATGATG+GGG | + | chr1_3:75641425-75641444 | Msa0140960:CDS | 40.0% | |
| !! | TGGAAATGGTGTTACTGAAG+AGG | + | chr1_3:75641668-75641687 | Msa0140960:CDS | 40.0% |
| !! | AAAAGTGAAGGCGTTAGCAA+TGG | + | chr1_3:75641702-75641721 | Msa0140960:intron | 40.0% |
| !! | AAAGTGAAGGCGTTAGCAAT+GGG | + | chr1_3:75641703-75641722 | Msa0140960:intron | 40.0% |
| TTCCAAAATGGGTGATTGGA+AGG | + | chr1_3:75641942-75641961 | Msa0140960:intron | 40.0% | |
| ! | CAACGTTCTTGATTTCTGGA+TGG | + | chr1_3:75642036-75642055 | Msa0140960:intron | 40.0% |
| CTCTTCAGAGCAGAAATAGT+GGG | - | chr1_3:75642145-75642164 | None:intergenic | 40.0% | |
| ACTCTTCAGAGCAGAAATAG+TGG | - | chr1_3:75642146-75642165 | None:intergenic | 40.0% | |
| ! | AAATCCAGACCAAAGTACCT+CGG | + | chr1_3:75642342-75642361 | Msa0140960:intron | 40.0% |
| ! | TACCTCGGATTTTAGATGCT+AGG | + | chr1_3:75642357-75642376 | Msa0140960:intron | 40.0% |
| ! | ACCTCGGATTTTAGATGCTA+GGG | + | chr1_3:75642358-75642377 | Msa0140960:intron | 40.0% |
| GATACCGGAGCATATTATCA+TGG | - | chr1_3:75642490-75642509 | None:intergenic | 40.0% | |
| ! | GTCCTGCATATTTAGAATGG+TGG | + | chr1_3:75642574-75642593 | Msa0140960:intron | 40.0% |
| TCCCACCATTCTAAATATGC+AGG | - | chr1_3:75642579-75642598 | None:intergenic | 40.0% | |
| TGGTGGGAATGCAATTTAAC+TGG | + | chr1_3:75642591-75642610 | Msa0140960:intron | 40.0% | |
| CGTTGAGACACTGAAACTAT+GGG | + | chr1_3:75642779-75642798 | Msa0140960:intron | 40.0% | |
| GTTGAGACACTGAAACTATG+GGG | + | chr1_3:75642780-75642799 | Msa0140960:intron | 40.0% | |
| TTGAGACACTGAAACTATGG+GGG | + | chr1_3:75642781-75642800 | Msa0140960:intron | 40.0% | |
| TCATAAAAGTCCTGCTGATG+GGG | + | chr1_3:75642867-75642886 | Msa0140960:intron | 40.0% | |
| GAACCCTTAGATGCAACTTT+AGG | + | chr1_3:75643019-75643038 | Msa0140960:CDS | 40.0% | |
| CAGTCATTAGGCAATAGCAA+CGG | + | chr1_3:75643103-75643122 | Msa0140960:CDS | 40.0% | |
| AATAGCAACGGTGGCATAAA+GGG | + | chr1_3:75643115-75643134 | Msa0140960:CDS | 40.0% | |
| ! | AAGTTGTGCCACTACAGTTA+TGG | + | chr1_3:75643168-75643187 | Msa0140960:CDS | 40.0% |
| AGAACCAACCATAACTGTAG+TGG | - | chr1_3:75643179-75643198 | None:intergenic | 40.0% | |
| !! | CAGCAGGGAACTTCTAAAAT+TGG | + | chr1_3:75643280-75643299 | Msa0140960:intron | 40.0% |
| AGAACACGAACTGAAGCTAA+TGG | + | chr1_3:75643349-75643368 | Msa0140960:CDS | 40.0% | |
| GAACACGAACTGAAGCTAAT+GGG | + | chr1_3:75643350-75643369 | Msa0140960:CDS | 40.0% | |
| CATGCAGATGTCATGCAAAA+TGG | + | chr1_3:75643373-75643392 | Msa0140960:CDS | 40.0% | |
| GACTTTCTGCTTCATCCTTA+AGG | - | chr1_3:75643557-75643576 | None:intergenic | 40.0% | |
| AACAGATTCCTACTCTAAGC+TGG | + | chr1_3:75644066-75644085 | Msa0140960:CDS | 40.0% | |
| GAAATTCCAACCTGAAGGTA+TGG | - | chr1_3:75644176-75644195 | None:intergenic | 40.0% | |
| ! | TTTCACGAGCTGATTTATGC+AGG | + | chr1_3:75644258-75644277 | Msa0140960:intron | 40.0% |
| TGCTATTGATGCACTGTTAG+AGG | - | chr1_3:75644317-75644336 | None:intergenic | 40.0% | |
| !! | GCAGTAAGACACTGTTGTTT+TGG | + | chr1_3:75644337-75644356 | Msa0140960:intron | 40.0% |
| GCTATGCGTACCATATGTAT+TGG | + | chr1_3:75644389-75644408 | Msa0140960:intron | 40.0% | |
| CAAGCAAATCCTTAAGGCTT+GGG | - | chr1_3:75644701-75644720 | None:intergenic | 40.0% | |
| TCAAGCAAATCCTTAAGGCT+TGG | - | chr1_3:75644702-75644721 | None:intergenic | 40.0% | |
| TTGCTTGAATAAGACAGGAC+AGG | + | chr1_3:75644714-75644733 | Msa0140960:intron | 40.0% | |
| TGCTTGAATAAGACAGGACA+GGG | + | chr1_3:75644715-75644734 | Msa0140960:intron | 40.0% | |
| ATTGGACTCTCACATGAAAC+CGG | + | chr1_3:75644938-75644957 | Msa0140960:CDS | 40.0% | |
| TTGCAGTAGTTGTGGAGAAA+GGG | + | chr1_3:75644983-75645002 | Msa0140960:CDS | 40.0% | |
| CAAGCTCAATACAGGACAAA+TGG | - | chr1_3:75645055-75645074 | None:intergenic | 40.0% | |
| TGTGCTAATTGCACCAAAAG+TGG | + | chr1_3:75645107-75645126 | Msa0140960:CDS | 40.0% | |
| AATTGCACCAAAAGTGGCTT+TGG | + | chr1_3:75645113-75645132 | Msa0140960:CDS | 40.0% | |
| GGGATTCAAATATCTACAGG+TGG | + | chr1_3:75645275-75645294 | Msa0140960:CDS | 40.0% | |
| ATTTCCACACACTTTGCAAC+TGG | - | chr1_3:75645312-75645331 | None:intergenic | 40.0% | |
| CTTGATCGGTGAAACAAACT+TGG | - | chr1_3:75645472-75645491 | None:intergenic | 40.0% | |
| CACTGGATTCTATTCCACAA+GGG | + | chr1_3:75645558-75645577 | Msa0140960:CDS | 40.0% | |
| TTCTGCAGAAAATGTGATGC+TGG | + | chr1_3:75645587-75645606 | Msa0140960:CDS | 40.0% | |
| GAAGAATTGGAAAGTTGTGG+TGG | + | chr1_3:75645719-75645738 | Msa0140960:CDS | 40.0% | |
| ! | ATTGGAAAGTTGTGGTGGAA+TGG | + | chr1_3:75645724-75645743 | Msa0140960:CDS | 40.0% |
| ATGTCCTCTTCTACTCAAAC+TGG | - | chr1_3:75645805-75645824 | None:intergenic | 40.0% | |
| AGTTTGAGTAGAAGAGGACA+TGG | + | chr1_3:75645804-75645823 | Msa0140960:exon | 40.0% | |
| GTTTGAGTAGAAGAGGACAT+GGG | + | chr1_3:75645805-75645824 | Msa0140960:exon | 40.0% | |
| !! | TGGATGACTGACATTTTGGT+AGG | + | chr1_3:75645926-75645945 | Msa0140960:three_prime_UTR | 40.0% |
| TGCTATCTGCAAGAGCAAAT+AGG | + | chr1_3:75646051-75646070 | Msa0140960:three_prime_UTR | 40.0% | |
| AATTGGCAGCCCATCATCAA+TGG | - | chr1_3:75640962-75640981 | None:intergenic | 45.0% | |
| CTGCCAATTTCCAGTGGAAA+TGG | + | chr1_3:75640973-75640992 | Msa0140960:CDS | 45.0% | |
| AGTTTGAAAAATGGGGTGGG+TGG | + | chr1_3:75641096-75641115 | Msa0140960:CDS | 45.0% | |
| ! | TAGTGTTGCTGATGTAGCTG+AGG | + | chr1_3:75641266-75641285 | Msa0140960:intron | 45.0% |
| ! | GATGGGGCGATATTTTCGAA+TGG | + | chr1_3:75641513-75641532 | Msa0140960:CDS | 45.0% |
| !! | TGAAGCTTTGAATGATGGGG+TGG | + | chr1_3:75641572-75641591 | Msa0140960:CDS | 45.0% |
| ! | GATGGGGTGGTGTTTTCAAA+TGG | + | chr1_3:75641585-75641604 | Msa0140960:CDS | 45.0% |
| !! | AATGGTGTTACTGAAGAGGC+TGG | + | chr1_3:75641672-75641691 | Msa0140960:CDS | 45.0% |
| GCTGGAGTCTTGAAAAGTGA+AGG | + | chr1_3:75641690-75641709 | Msa0140960:intron | 45.0% | |
| !! | AAGTGAAGGCGTTAGCAATG+GGG | + | chr1_3:75641704-75641723 | Msa0140960:intron | 45.0% |
| ACAAAGCAGGAAAGCAAACC+TGG | - | chr1_3:75641887-75641906 | None:intergenic | 45.0% | |
| ! | CTCCTTCCAATCACCCATTT+TGG | - | chr1_3:75641947-75641966 | None:intergenic | 45.0% |
| CAAAATGGGTGATTGGAAGG+AGG | + | chr1_3:75641945-75641964 | Msa0140960:intron | 45.0% | |
| ! | AAATCCGAGGTACTTTGGTC+TGG | - | chr1_3:75642349-75642368 | None:intergenic | 45.0% |
| ! | TCCCTAGCATCTAAAATCCG+AGG | - | chr1_3:75642362-75642381 | None:intergenic | 45.0% |
| GCGTTGAGACACTGAAACTA+TGG | + | chr1_3:75642778-75642797 | Msa0140960:intron | 45.0% | |
| TGAGACACTGAAACTATGGG+GGG | + | chr1_3:75642782-75642801 | Msa0140960:intron | 45.0% | |
| TATAGTTGAACCCCATCAGC+AGG | - | chr1_3:75642880-75642899 | None:intergenic | 45.0% | |
| CACGTTTCCCCAATGTCTAT+GGG | - | chr1_3:75643065-75643084 | None:intergenic | 45.0% | |
| ! | CGTTGCTATTGCCTAATGAC+TGG | - | chr1_3:75643105-75643124 | None:intergenic | 45.0% |
| TCATTAGGCAATAGCAACGG+TGG | + | chr1_3:75643106-75643125 | Msa0140960:CDS | 45.0% | |
| CAATAGCAACGGTGGCATAA+AGG | + | chr1_3:75643114-75643133 | Msa0140960:CDS | 45.0% | |
| ATAGCAACGGTGGCATAAAG+GGG | + | chr1_3:75643116-75643135 | Msa0140960:CDS | 45.0% | |
| ! | TGTGCCACTACAGTTATGGT+TGG | + | chr1_3:75643172-75643191 | Msa0140960:intron | 45.0% |
| TTCCAACTTACTTTGGCAGC+AGG | + | chr1_3:75643264-75643283 | Msa0140960:intron | 45.0% | |
| TCCAACTTACTTTGGCAGCA+GGG | + | chr1_3:75643265-75643284 | Msa0140960:intron | 45.0% | |
| GGATCTTCTAGTGAACCACA+TGG | + | chr1_3:75643394-75643413 | Msa0140960:CDS | 45.0% | |
| TTCTTTCCGGCTTCGTTGAT+TGG | - | chr1_3:75643513-75643532 | None:intergenic | 45.0% | |
| GCATGTTCCATGTTAGTTGC+TGG | + | chr1_3:75643937-75643956 | Msa0140960:intron | 45.0% | |
| CAACAATCTGCCATACCTTC+AGG | + | chr1_3:75644163-75644182 | Msa0140960:intron | 45.0% | |
| AATCTGCCATACCTTCAGGT+TGG | + | chr1_3:75644167-75644186 | Msa0140960:intron | 45.0% | |
| GCACTGAAATTCCAACCTGA+AGG | - | chr1_3:75644181-75644200 | None:intergenic | 45.0% | |
| TCATGTGAGAGTCCAATTCC+TGG | - | chr1_3:75644935-75644954 | None:intergenic | 45.0% | |
| TCACATGAAACCGGAGCAAA+CGG | + | chr1_3:75644947-75644966 | Msa0140960:CDS | 45.0% | |
| GTTGCAGTAGTTGTGGAGAA+AGG | + | chr1_3:75644982-75645001 | Msa0140960:CDS | 45.0% | |
| GGTCTGTGATTCATGTGAGA+AGG | + | chr1_3:75645025-75645044 | Msa0140960:CDS | 45.0% | |
| ! | GCACAATACCAGCTTTTGTG+AGG | - | chr1_3:75645092-75645111 | None:intergenic | 45.0% |
| TGAAAGCCTCCCTACAAATG+AGG | + | chr1_3:75645208-75645227 | Msa0140960:CDS | 45.0% | |
| GTGTTTCCTCATTTGTAGGG+AGG | - | chr1_3:75645217-75645236 | None:intergenic | 45.0% | |
| AAAGCCAGTTGCAAAGTGTG+TGG | + | chr1_3:75645305-75645324 | Msa0140960:CDS | 45.0% | |
| TGCTTGTCAAACACCTTGCA+TGG | - | chr1_3:75645400-75645419 | None:intergenic | 45.0% | |
| TCACAGATTGTCCTCTGTGA+TGG | + | chr1_3:75645497-75645516 | Msa0140960:CDS | 45.0% | |
| TGTGGAATAGAATCCAGTGG+AGG | - | chr1_3:75645557-75645576 | None:intergenic | 45.0% | |
| CCTTGTGGAATAGAATCCAG+TGG | - | chr1_3:75645560-75645579 | None:intergenic | 45.0% | |
| CCACTGGATTCTATTCCACA+AGG | + | chr1_3:75645557-75645576 | Msa0140960:CDS | 45.0% | |
| TGGAATCAAGGCAATATCCC+AGG | + | chr1_3:75645607-75645626 | Msa0140960:CDS | 45.0% | |
| !!! | CTCGTACGCTTTTTTTGCCT+GGG | - | chr1_3:75645627-75645646 | None:intergenic | 45.0% |
| !!! | TCTCGTACGCTTTTTTTGCC+TGG | - | chr1_3:75645628-75645647 | None:intergenic | 45.0% |
| GAGAGTAACAAGCTGAGAAC+CGG | + | chr1_3:75645644-75645663 | Msa0140960:CDS | 45.0% | |
| ! | GAGGACATGGGTTTTCTTGA+AGG | + | chr1_3:75645817-75645836 | Msa0140960:three_prime_UTR | 45.0% |
| GAATGATGTGGCAGTGTTCG+CGG | + | chr1_3:75641035-75641054 | Msa0140960:CDS | 50.0% | |
| ! | TGGAAGTAGTGTTGCTGACG+TGG | + | chr1_3:75641059-75641078 | Msa0140960:CDS | 50.0% |
| TTGCTGAAGAGGCTCGAGAA+TGG | + | chr1_3:75641127-75641146 | Msa0140960:CDS | 50.0% | |
| ! | GATGGGGCAGTGTTTTCCAA+TGG | + | chr1_3:75641240-75641259 | Msa0140960:intron | 50.0% |
| ! | TGAAGCTGTGAATGATGGGG+CGG | + | chr1_3:75641428-75641447 | Msa0140960:CDS | 50.0% |
| ! | AGTTCAGGCGGGTTTGATTC+TGG | + | chr1_3:75641732-75641751 | Msa0140960:CDS | 50.0% |
| GCGGGTTTGATTCTGGTGAT+GGG | + | chr1_3:75641739-75641758 | Msa0140960:CDS | 50.0% | |
| ! | CGGGTTTGATTCTGGTGATG+GGG | + | chr1_3:75641740-75641759 | Msa0140960:CDS | 50.0% |
| !! | GGGTTTGATTCTGGTGATGG+GGG | + | chr1_3:75641741-75641760 | Msa0140960:CDS | 50.0% |
| GAGTTCAAAAGGCAAAGCGC+AGG | + | chr1_3:75641818-75641837 | Msa0140960:CDS | 50.0% | |
| TTCAAAAGGCAAAGCGCAGG+AGG | + | chr1_3:75641821-75641840 | Msa0140960:CDS | 50.0% | |
| TGCGAGTCATATAGCAGACC+AGG | + | chr1_3:75641866-75641885 | Msa0140960:CDS | 50.0% | |
| GAGACACTGAAACTATGGGG+GGG | + | chr1_3:75642783-75642802 | Msa0140960:intron | 50.0% | |
| TGAAACTATGGGGGGGAGAA+GGG | + | chr1_3:75642790-75642809 | Msa0140960:intron | 50.0% | |
| CTAAGGGTTCCTTCACAACC+TGG | - | chr1_3:75643009-75643028 | None:intergenic | 50.0% | |
| ATGCTTGCGCCCATAGACAT+TGG | + | chr1_3:75643053-75643072 | Msa0140960:CDS | 50.0% | |
| TGCTTGCGCCCATAGACATT+GGG | + | chr1_3:75643054-75643073 | Msa0140960:CDS | 50.0% | |
| CCACGTTTCCCCAATGTCTA+TGG | - | chr1_3:75643066-75643085 | None:intergenic | 50.0% | |
| CCATAGACATTGGGGAAACG+TGG | + | chr1_3:75643063-75643082 | Msa0140960:CDS | 50.0% | |
| ! | GTGGCATAAAGGGGTGCATA+GGG | + | chr1_3:75643125-75643144 | Msa0140960:CDS | 50.0% |
| ! | TGGCATAAAGGGGTGCATAG+GGG | + | chr1_3:75643126-75643145 | Msa0140960:CDS | 50.0% |
| TCCCTGCTGCCAAAGTAAGT+TGG | - | chr1_3:75643269-75643288 | None:intergenic | 50.0% | |
| TCTAGTGAACCACATGGCCA+TGG | + | chr1_3:75643400-75643419 | Msa0140960:CDS | 50.0% | |
| GACACATCTCAGTCACACCA+TGG | - | chr1_3:75643420-75643439 | None:intergenic | 50.0% | |
| GCACATTCTTCCGTTTGCTC+CGG | - | chr1_3:75644960-75644979 | None:intergenic | 50.0% | |
| GAGCAAACGGAAGAATGTGC+TGG | + | chr1_3:75644960-75644979 | Msa0140960:CDS | 50.0% | |
| !! | TGTGCTGGTTGCAGTAGTTG+TGG | + | chr1_3:75644975-75644994 | Msa0140960:CDS | 50.0% |
| AGTTGTGGAGAAAGGGCAGA+TGG | + | chr1_3:75644990-75645009 | Msa0140960:CDS | 50.0% | |
| GGCAGATGGCACAGATTGTT+TGG | + | chr1_3:75645004-75645023 | Msa0140960:CDS | 50.0% | |
| !! | CGGAGAACCAAAGCCACTTT+TGG | - | chr1_3:75645123-75645142 | None:intergenic | 50.0% |
| CTATTGCATGAAGCCTCCAC+TGG | + | chr1_3:75645541-75645560 | Msa0140960:CDS | 50.0% | |
| CTGCAGAACCATTTCCCTTG+TGG | - | chr1_3:75645575-75645594 | None:intergenic | 50.0% | |
| TGAAGGATTTGTGAGCGTCC+CGG | + | chr1_3:75645834-75645853 | Msa0140960:three_prime_UTR | 50.0% | |
| !! | GATGGGCTGCCAATTTCCAG+TGG | + | chr1_3:75640967-75640986 | Msa0140960:CDS | 55.0% |
| !! | TGAAGGCGTTAGCAATGGGG+TGG | + | chr1_3:75641707-75641726 | Msa0140960:intron | 55.0% |
| AGCAATGGGGTGGCAAGTTC+AGG | + | chr1_3:75641717-75641736 | Msa0140960:CDS | 55.0% | |
| AATGGGGTGGCAAGTTCAGG+CGG | + | chr1_3:75641720-75641739 | Msa0140960:CDS | 55.0% | |
| ! | GGCGGGTTTGATTCTGGTGA+TGG | + | chr1_3:75641738-75641757 | Msa0140960:CDS | 55.0% |
| GGAGGATTGTGGAAAACGCG+TGG | + | chr1_3:75641839-75641858 | Msa0140960:CDS | 55.0% | |
| CTGAAACTATGGGGGGGAGA+AGG | + | chr1_3:75642789-75642808 | Msa0140960:intron | 55.0% | |
| GAAACTATGGGGGGGAGAAG+GGG | + | chr1_3:75642791-75642810 | Msa0140960:intron | 55.0% | |
| AAACTATGGGGGGGAGAAGG+GGG | + | chr1_3:75642792-75642811 | Msa0140960:intron | 55.0% | |
| GCTTGCGCCCATAGACATTG+GGG | + | chr1_3:75643055-75643074 | Msa0140960:CDS | 55.0% | |
| ! | GGTGGCATAAAGGGGTGCAT+AGG | + | chr1_3:75643124-75643143 | Msa0140960:CDS | 55.0% |
| TCAGTCACACCATGGCCATG+TGG | - | chr1_3:75643412-75643431 | None:intergenic | 55.0% | |
| CATGATCGCAGCCATCACAG+AGG | - | chr1_3:75645511-75645530 | None:intergenic | 55.0% | |
| GATGTGGCAGTGTTCGCGGA+TGG | + | chr1_3:75641039-75641058 | Msa0140960:CDS | 60.0% | |
| ! | TAGTGTTGCTGACGTGGCCG+AGG | + | chr1_3:75641065-75641084 | Msa0140960:CDS | 60.0% |
| GATGGGGCGGTGACTGTGAA+TGG | + | chr1_3:75641441-75641460 | Msa0140960:CDS | 60.0% | |
| ATGGGGTGGCAAGTTCAGGC+GGG | + | chr1_3:75641721-75641740 | Msa0140960:CDS | 60.0% | |
| !! | GATTCTGGTGATGGGGGCTC+TGG | + | chr1_3:75641747-75641766 | Msa0140960:CDS | 60.0% |
| GGCAAAGCGCAGGAGGATTG+TGG | + | chr1_3:75641828-75641847 | Msa0140960:CDS | 60.0% | |
| AACTATGGGGGGGAGAAGGG+GGG | + | chr1_3:75642793-75642812 | Msa0140960:intron | 60.0% | |
| !! | TCTGGTGATGGGGGCTCTGG+TGG | + | chr1_3:75641750-75641769 | Msa0140960:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 75640883 | 75646168 | 75640883 | ID=Msa0140960;Name=Msa0140960 |
| chr1_3 | mRNA | 75640883 | 75646168 | 75640883 | ID=Msa0140960-mRNA-1;Parent=Msa0140960;Name=Msa0140960-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.5|0.36|1|0.4|0.18|11|354|810 |
| chr1_3 | exon | 75640883 | 75640994 | 75640883 | ID=Msa0140960-mRNA-1:exon:26358;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75641010 | 75641250 | 75641010 | ID=Msa0140960-mRNA-1:exon:26359;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75641269 | 75641465 | 75641269 | ID=Msa0140960-mRNA-1:exon:26360;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75641481 | 75641705 | 75641481 | ID=Msa0140960-mRNA-1:exon:26361;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75641712 | 75641887 | 75641712 | ID=Msa0140960-mRNA-1:exon:26362;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75643010 | 75643189 | 75643010 | ID=Msa0140960-mRNA-1:exon:26363;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75643283 | 75643444 | 75643283 | ID=Msa0140960-mRNA-1:exon:26364;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75643493 | 75643618 | 75643493 | ID=Msa0140960-mRNA-1:exon:26365;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75643998 | 75644087 | 75643998 | ID=Msa0140960-mRNA-1:exon:26366;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75644185 | 75644229 | 75644185 | ID=Msa0140960-mRNA-1:exon:26367;Parent=Msa0140960-mRNA-1 |
| chr1_3 | exon | 75644936 | 75646168 | 75644936 | ID=Msa0140960-mRNA-1:exon:26368;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75640883 | 75640994 | 75640883 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75641010 | 75641250 | 75641010 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75641269 | 75641465 | 75641269 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75641481 | 75641705 | 75641481 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75641712 | 75641887 | 75641712 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75643010 | 75643189 | 75643010 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75643283 | 75643444 | 75643283 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75643493 | 75643618 | 75643493 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75643998 | 75644087 | 75643998 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75644185 | 75644229 | 75644185 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | CDS | 75644936 | 75645814 | 75644936 | ID=Msa0140960-mRNA-1:cds;Parent=Msa0140960-mRNA-1 |
| chr1_3 | three_prime_UTR | 75645815 | 75646168 | 75645815 | ID=Msa0140960-mRNA-1:three_prime_utr;Parent=Msa0140960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
