Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580140 | XP_013445817.1 | 99.307 | 577 | 4 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580140 | sp|Q8H157|PTR19_ARATH | 70.068 | 588 | 160 | 7 | 1 | 576 | 1 | 584 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580140 | A0A072TSL8 | 99.307 | 577 | 4 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1180 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090870 | Msa0580140 | 0.842470 | 2.536387e-58 | -8.615850e-47 |
| Msa0183390 | Msa0580140 | 0.805075 | 1.590234e-49 | -8.615850e-47 |
| Msa0186240 | Msa0580140 | 0.801300 | 9.608670e-49 | -8.615850e-47 |
| Msa0224870 | Msa0580140 | 0.815531 | 8.816503e-52 | -8.615850e-47 |
| Msa0434300 | Msa0580140 | 0.804001 | 2.663174e-49 | -8.615850e-47 |
| Msa0478080 | Msa0580140 | 0.810721 | 1.001306e-50 | -8.615850e-47 |
| Msa0242720 | Msa0580140 | 0.819861 | 9.299335e-53 | -8.615850e-47 |
| Msa0320170 | Msa0580140 | 0.829148 | 6.053055e-55 | -8.615850e-47 |
| Msa0345050 | Msa0580140 | 0.801709 | 7.921248e-49 | -8.615850e-47 |
| Msa0522140 | Msa0580140 | 0.808399 | 3.157654e-50 | -8.615850e-47 |
| Msa0522170 | Msa0580140 | 0.804706 | 1.898892e-49 | -8.615850e-47 |
| Msa0531050 | Msa0580140 | 0.806949 | 6.416806e-50 | -8.615850e-47 |
| Msa0548420 | Msa0580140 | 0.815226 | 1.030307e-51 | -8.615850e-47 |
| Msa0580140 | Msa0603300 | 0.828450 | 8.932639e-55 | -8.615850e-47 |
| Msa0580140 | Msa0603310 | 0.830015 | 3.726211e-55 | -8.615850e-47 |
| Msa0580140 | Msa0637590 | 0.805499 | 1.295940e-49 | -8.615850e-47 |
| Msa0580140 | Msa0644340 | 0.807525 | 4.844687e-50 | -8.615850e-47 |
| Msa0580140 | Msa0736560 | 0.805474 | 1.311655e-49 | -8.615850e-47 |
| Msa0580140 | Msa0736920 | 0.814197 | 1.742049e-51 | -8.615850e-47 |
| Msa0580140 | Msa0778570 | 0.811837 | 5.734192e-51 | -8.615850e-47 |
| Msa0580140 | Msa0815940 | 0.819404 | 1.182377e-52 | -8.615850e-47 |
| Msa0580140 | Msa0833640 | 0.801166 | 1.023787e-48 | -8.615850e-47 |
| Msa0580140 | Msa0905570 | 0.803987 | 2.681288e-49 | -8.615850e-47 |
| Msa0580140 | Msa0966580 | 0.809565 | 1.776817e-50 | -8.615850e-47 |
| Msa0580140 | Msa1001120 | 0.802536 | 5.355956e-49 | -8.615850e-47 |
| Msa0580140 | Msa1034950 | 0.838462 | 2.834475e-57 | -8.615850e-47 |
| Msa0580140 | Msa1035050 | 0.807050 | 6.106665e-50 | -8.615850e-47 |
| Msa0580140 | Msa1075010 | 0.841193 | 5.513215e-58 | -8.615850e-47 |
| Msa0580140 | Msa1075090 | 0.817262 | 3.612068e-52 | -8.615850e-47 |
| Msa0580140 | Msa1080130 | 0.813658 | 2.289584e-51 | -8.615850e-47 |
| Msa0580140 | Msa1100330 | 0.800557 | 1.362702e-48 | -8.615850e-47 |
| Msa0580140 | Msa1107220 | 0.818493 | 1.904327e-52 | -8.615850e-47 |
| Msa0580140 | Msa1150760 | 0.809857 | 1.537921e-50 | -8.615850e-47 |
| Msa0580140 | Msa1167310 | 0.822578 | 2.198381e-53 | -8.615850e-47 |
| Msa0580140 | Msa1184680 | 0.806545 | 7.809503e-50 | -8.615850e-47 |
| Msa0580140 | Msa1185270 | 0.804004 | 2.659174e-49 | -8.615850e-47 |
| Msa0580140 | Msa1202110 | 0.803807 | 2.922491e-49 | -8.615850e-47 |
| Msa0580140 | Msa1203650 | 0.807268 | 5.491061e-50 | -8.615850e-47 |
| Msa0580140 | Msa1203810 | 0.800469 | 1.420110e-48 | -8.615850e-47 |
| Msa0580140 | Msa1239210 | 0.803074 | 4.146137e-49 | -8.615850e-47 |
| Msa0580140 | Msa1248060 | 0.974823 | 7.725993e-139 | -8.615850e-47 |
| Msa0580140 | Msa1254870 | 0.803615 | 3.203891e-49 | -8.615850e-47 |
| Msa0580140 | Msa1289050 | 0.840409 | 8.846628e-58 | -8.615850e-47 |
| Msa0580140 | Msa1289090 | 0.838739 | 2.404293e-57 | -8.615850e-47 |
| Msa0580140 | Msa1328430 | 0.802406 | 5.696442e-49 | -8.615850e-47 |
| Msa0580140 | Msa1343600 | 0.816365 | 5.740507e-52 | -8.615850e-47 |
| Msa0580140 | Msa1395200 | -0.814157 | 1.777253e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580140 | MtrunA17_Chr8g0362711 | 99.307 | 577 | 4 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1180 |
| Msa0580140 | MtrunA17_Chr5g0415961 | 73.793 | 580 | 143 | 3 | 1 | 575 | 1 | 576 | 0.0 | 858 |
| Msa0580140 | MtrunA17_Chr2g0284701 | 41.107 | 596 | 310 | 8 | 2 | 574 | 14 | 591 | 1.76e-156 | 461 |
| Msa0580140 | MtrunA17_Chr3g0133341 | 42.199 | 564 | 291 | 8 | 20 | 571 | 10 | 550 | 1.16e-148 | 440 |
| Msa0580140 | MtrunA17_Chr7g0271221 | 41.860 | 559 | 285 | 8 | 24 | 571 | 17 | 546 | 1.20e-146 | 435 |
| Msa0580140 | MtrunA17_Chr1g0193391 | 40.323 | 558 | 295 | 7 | 24 | 571 | 17 | 546 | 3.02e-144 | 430 |
| Msa0580140 | MtrunA17_Chr4g0060071 | 67.466 | 292 | 86 | 4 | 293 | 576 | 13 | 303 | 1.45e-143 | 417 |
| Msa0580140 | MtrunA17_Chr8g0379971 | 40.504 | 595 | 314 | 10 | 13 | 575 | 9 | 595 | 1.71e-143 | 427 |
| Msa0580140 | MtrunA17_Chr2g0276751 | 40.070 | 569 | 295 | 9 | 15 | 571 | 29 | 563 | 7.45e-137 | 410 |
| Msa0580140 | MtrunA17_Chr5g0399071 | 38.488 | 582 | 330 | 6 | 3 | 571 | 4 | 570 | 1.04e-130 | 394 |
| Msa0580140 | MtrunA17_Chr7g0241741 | 39.192 | 569 | 318 | 10 | 13 | 571 | 11 | 561 | 2.31e-129 | 390 |
| Msa0580140 | MtrunA17_Chr4g0005901 | 39.787 | 563 | 323 | 9 | 13 | 571 | 21 | 571 | 7.91e-129 | 389 |
| Msa0580140 | MtrunA17_Chr8g0375311 | 36.268 | 568 | 339 | 5 | 13 | 571 | 29 | 582 | 3.78e-128 | 388 |
| Msa0580140 | MtrunA17_Chr3g0104011 | 36.702 | 564 | 345 | 8 | 13 | 573 | 11 | 565 | 8.83e-126 | 381 |
| Msa0580140 | MtrunA17_Chr8g0379991 | 39.192 | 569 | 305 | 9 | 45 | 574 | 1 | 567 | 1.27e-125 | 381 |
| Msa0580140 | MtrunA17_Chr4g0056431 | 39.487 | 585 | 323 | 7 | 3 | 571 | 4 | 573 | 2.78e-125 | 380 |
| Msa0580140 | MtrunA17_Chr4g0069581 | 41.328 | 542 | 280 | 9 | 41 | 571 | 3 | 517 | 2.78e-125 | 379 |
| Msa0580140 | MtrunA17_Chr8g0375291 | 36.649 | 573 | 334 | 7 | 3 | 562 | 17 | 573 | 9.58e-125 | 379 |
| Msa0580140 | MtrunA17_Chr5g0422881 | 36.252 | 571 | 339 | 4 | 18 | 577 | 14 | 570 | 2.17e-123 | 375 |
| Msa0580140 | MtrunA17_Chr5g0399061 | 37.961 | 569 | 325 | 8 | 16 | 571 | 19 | 572 | 1.31e-122 | 373 |
| Msa0580140 | MtrunA17_Chr8g0375351 | 36.222 | 577 | 354 | 6 | 1 | 569 | 10 | 580 | 7.27e-121 | 369 |
| Msa0580140 | MtrunA17_Chr3g0142101 | 37.276 | 558 | 326 | 8 | 13 | 566 | 24 | 561 | 8.34e-121 | 369 |
| Msa0580140 | MtrunA17_Chr8g0375341 | 36.252 | 571 | 335 | 7 | 13 | 571 | 29 | 582 | 6.73e-120 | 366 |
| Msa0580140 | MtrunA17_Chr8g0375361 | 36.092 | 568 | 340 | 6 | 13 | 571 | 28 | 581 | 3.11e-117 | 360 |
| Msa0580140 | MtrunA17_Chr7g0261811 | 36.028 | 569 | 335 | 9 | 13 | 570 | 16 | 566 | 6.48e-114 | 352 |
| Msa0580140 | MtrunA17_Chr1g0187241 | 34.155 | 568 | 351 | 6 | 13 | 572 | 15 | 567 | 1.19e-112 | 348 |
| Msa0580140 | MtrunA17_Chr7g0261771 | 35.626 | 567 | 340 | 7 | 13 | 570 | 20 | 570 | 3.09e-112 | 347 |
| Msa0580140 | MtrunA17_Chr7g0261881 | 34.921 | 567 | 344 | 8 | 13 | 570 | 16 | 566 | 5.42e-112 | 346 |
| Msa0580140 | MtrunA17_Chr3g0112671 | 35.364 | 591 | 331 | 12 | 1 | 571 | 1 | 560 | 9.71e-112 | 345 |
| Msa0580140 | MtrunA17_Chr8g0375321 | 34.708 | 582 | 347 | 7 | 2 | 569 | 15 | 577 | 2.11e-111 | 344 |
| Msa0580140 | MtrunA17_Chr1g0166711 | 34.798 | 569 | 345 | 7 | 13 | 572 | 14 | 565 | 2.25e-110 | 342 |
| Msa0580140 | MtrunA17_Chr5g0439381 | 36.979 | 576 | 336 | 6 | 5 | 576 | 9 | 561 | 7.78e-110 | 340 |
| Msa0580140 | MtrunA17_Chr3g0077151 | 35.140 | 572 | 317 | 9 | 13 | 573 | 17 | 545 | 1.58e-109 | 338 |
| Msa0580140 | MtrunA17_Chr1g0166791 | 31.842 | 581 | 371 | 6 | 1 | 572 | 1 | 565 | 3.06e-109 | 339 |
| Msa0580140 | MtrunA17_Chr7g0240381 | 34.354 | 588 | 336 | 11 | 1 | 571 | 4 | 558 | 6.07e-109 | 338 |
| Msa0580140 | MtrunA17_Chr7g0255621 | 33.333 | 585 | 354 | 9 | 3 | 571 | 1 | 565 | 8.55e-109 | 338 |
| Msa0580140 | MtrunA17_Chr3g0142091 | 35.979 | 567 | 325 | 8 | 15 | 569 | 17 | 557 | 8.94e-109 | 337 |
| Msa0580140 | MtrunA17_Chr8g0375331 | 34.470 | 557 | 335 | 7 | 2 | 546 | 3 | 541 | 2.78e-108 | 336 |
| Msa0580140 | MtrunA17_Chr7g0261791 | 35.211 | 568 | 342 | 8 | 13 | 570 | 18 | 569 | 1.43e-107 | 335 |
| Msa0580140 | MtrunA17_Chr4g0014871 | 33.793 | 580 | 344 | 9 | 3 | 574 | 9 | 556 | 2.46e-106 | 330 |
| Msa0580140 | MtrunA17_Chr4g0014791 | 35.524 | 563 | 326 | 8 | 13 | 570 | 18 | 548 | 2.26e-105 | 328 |
| Msa0580140 | MtrunA17_Chr7g0255611 | 34.159 | 565 | 344 | 9 | 19 | 569 | 24 | 574 | 3.98e-105 | 328 |
| Msa0580140 | MtrunA17_Chr4g0063591 | 37.522 | 557 | 338 | 6 | 15 | 571 | 13 | 559 | 4.53e-103 | 323 |
| Msa0580140 | MtrunA17_Chr7g0255601 | 34.435 | 575 | 347 | 9 | 15 | 575 | 18 | 576 | 6.19e-103 | 323 |
| Msa0580140 | MtrunA17_Chr7g0214731 | 34.929 | 564 | 335 | 8 | 26 | 571 | 63 | 612 | 8.49e-103 | 324 |
| Msa0580140 | MtrunA17_Chr1g0166741 | 33.333 | 549 | 334 | 7 | 13 | 552 | 16 | 541 | 3.11e-102 | 320 |
| Msa0580140 | MtrunA17_Chr4g0014841 | 34.386 | 570 | 331 | 9 | 13 | 574 | 18 | 552 | 5.65e-102 | 319 |
| Msa0580140 | MtrunA17_Chr4g0014801 | 34.501 | 571 | 333 | 9 | 13 | 575 | 18 | 555 | 7.34e-101 | 316 |
| Msa0580140 | MtrunA17_Chr4g0008651 | 32.823 | 588 | 355 | 12 | 4 | 576 | 12 | 574 | 7.47e-101 | 317 |
| Msa0580140 | MtrunA17_Chr4g0054891 | 33.155 | 561 | 365 | 5 | 4 | 562 | 90 | 642 | 8.62e-101 | 319 |
| Msa0580140 | MtrunA17_Chr4g0014781 | 33.625 | 571 | 338 | 9 | 13 | 575 | 18 | 555 | 8.37e-99 | 311 |
| Msa0580140 | MtrunA17_Chr5g0400371 | 32.810 | 573 | 352 | 7 | 13 | 569 | 101 | 656 | 5.44e-98 | 312 |
| Msa0580140 | MtrunA17_Chr7g0217461 | 34.783 | 575 | 341 | 10 | 13 | 570 | 13 | 570 | 4.67e-97 | 307 |
| Msa0580140 | MtrunA17_Chr3g0114501 | 31.088 | 579 | 371 | 8 | 3 | 571 | 1 | 561 | 1.09e-96 | 306 |
| Msa0580140 | MtrunA17_Chr3g0112611 | 32.874 | 581 | 356 | 9 | 4 | 571 | 10 | 569 | 5.28e-96 | 305 |
| Msa0580140 | MtrunA17_Chr7g0261851 | 33.619 | 583 | 358 | 8 | 1 | 570 | 1 | 567 | 4.96e-95 | 302 |
| Msa0580140 | MtrunA17_Chr8g0353031 | 32.327 | 563 | 332 | 8 | 26 | 571 | 20 | 550 | 2.47e-94 | 300 |
| Msa0580140 | MtrunA17_Chr1g0166771 | 32.580 | 531 | 314 | 8 | 38 | 553 | 5 | 506 | 6.47e-94 | 298 |
| Msa0580140 | MtrunA17_Chr7g0214461 | 31.148 | 549 | 365 | 5 | 22 | 569 | 76 | 612 | 2.39e-92 | 296 |
| Msa0580140 | MtrunA17_Chr1g0213711 | 30.880 | 557 | 356 | 5 | 22 | 569 | 19 | 555 | 2.81e-90 | 290 |
| Msa0580140 | MtrunA17_Chr5g0415791 | 32.042 | 568 | 351 | 7 | 24 | 573 | 29 | 579 | 3.67e-88 | 285 |
| Msa0580140 | MtrunA17_Chr4g0014861 | 33.937 | 442 | 262 | 6 | 141 | 574 | 12 | 431 | 8.19e-88 | 278 |
| Msa0580140 | MtrunA17_Chr1g0166731 | 34.395 | 471 | 283 | 7 | 111 | 572 | 9 | 462 | 5.03e-87 | 278 |
| Msa0580140 | MtrunA17_Chr7g0218851 | 30.935 | 556 | 351 | 8 | 26 | 569 | 48 | 582 | 1.54e-86 | 280 |
| Msa0580140 | MtrunA17_Chr4g0059971 | 30.254 | 552 | 378 | 5 | 27 | 573 | 37 | 586 | 4.59e-86 | 279 |
| Msa0580140 | MtrunA17_Chr7g0261661 | 34.468 | 470 | 279 | 9 | 112 | 570 | 1 | 452 | 2.48e-85 | 274 |
| Msa0580140 | MtrunA17_Chr8g0362781 | 30.142 | 564 | 382 | 4 | 18 | 573 | 24 | 583 | 1.67e-82 | 269 |
| Msa0580140 | MtrunA17_Chr7g0261751 | 33.262 | 469 | 280 | 6 | 13 | 449 | 20 | 487 | 2.59e-81 | 264 |
| Msa0580140 | MtrunA17_Chr4g0059991 | 31.760 | 551 | 362 | 9 | 35 | 576 | 33 | 578 | 9.90e-80 | 262 |
| Msa0580140 | MtrunA17_Chr7g0234381 | 34.279 | 458 | 259 | 7 | 111 | 568 | 3 | 418 | 2.38e-79 | 256 |
| Msa0580140 | MtrunA17_Chr7g0234151 | 33.624 | 458 | 262 | 7 | 111 | 568 | 3 | 418 | 6.64e-78 | 252 |
| Msa0580140 | MtrunA17_Chr4g0059981 | 30.351 | 570 | 375 | 7 | 12 | 575 | 32 | 585 | 1.07e-77 | 257 |
| Msa0580140 | MtrunA17_Chr3g0082631 | 34.240 | 441 | 265 | 8 | 145 | 571 | 30 | 459 | 2.32e-77 | 252 |
| Msa0580140 | MtrunA17_Chr7g0234181 | 35.165 | 455 | 253 | 8 | 114 | 568 | 1 | 413 | 2.68e-77 | 250 |
| Msa0580140 | MtrunA17_Chr4g0011471 | 30.922 | 553 | 342 | 9 | 35 | 569 | 27 | 557 | 4.58e-77 | 254 |
| Msa0580140 | MtrunA17_Chr1g0147631 | 31.016 | 561 | 342 | 9 | 26 | 565 | 27 | 563 | 9.48e-77 | 254 |
| Msa0580140 | MtrunA17_Chr8g0390331 | 30.017 | 583 | 357 | 9 | 1 | 565 | 3 | 552 | 2.26e-76 | 253 |
| Msa0580140 | MtrunA17_Chr4g0060001 | 29.663 | 563 | 356 | 8 | 28 | 572 | 33 | 573 | 5.66e-75 | 250 |
| Msa0580140 | MtrunA17_Chr4g0011041 | 28.769 | 577 | 369 | 11 | 13 | 569 | 25 | 579 | 2.94e-73 | 244 |
| Msa0580140 | MtrunA17_Chr4g0003761 | 29.693 | 586 | 358 | 16 | 2 | 565 | 15 | 568 | 4.23e-71 | 239 |
| Msa0580140 | MtrunA17_Chr7g0240271 | 26.876 | 573 | 408 | 5 | 1 | 568 | 1 | 567 | 8.08e-71 | 238 |
| Msa0580140 | MtrunA17_Chr6g0451841 | 31.418 | 557 | 328 | 11 | 25 | 561 | 4 | 526 | 1.26e-70 | 236 |
| Msa0580140 | MtrunA17_Chr1g0157611 | 27.580 | 562 | 367 | 10 | 24 | 568 | 16 | 554 | 1.16e-69 | 234 |
| Msa0580140 | MtrunA17_Chr1g0157601 | 28.036 | 560 | 361 | 11 | 27 | 568 | 18 | 553 | 1.21e-69 | 234 |
| Msa0580140 | MtrunA17_Chr8g0362801 | 29.787 | 470 | 319 | 5 | 112 | 575 | 1 | 465 | 1.65e-69 | 232 |
| Msa0580140 | MtrunA17_Chr7g0240281 | 28.929 | 560 | 363 | 8 | 24 | 565 | 24 | 566 | 3.55e-69 | 234 |
| Msa0580140 | MtrunA17_Chr2g0331521 | 27.305 | 564 | 369 | 11 | 24 | 568 | 22 | 563 | 4.36e-69 | 234 |
| Msa0580140 | MtrunA17_Chr2g0331471 | 29.636 | 577 | 331 | 16 | 26 | 565 | 90 | 628 | 9.87e-69 | 235 |
| Msa0580140 | MtrunA17_Chr2g0331481 | 28.546 | 571 | 341 | 15 | 28 | 565 | 29 | 565 | 3.82e-64 | 221 |
| Msa0580140 | MtrunA17_Chr5g0415841 | 30.544 | 478 | 295 | 8 | 112 | 571 | 1 | 459 | 5.06e-63 | 214 |
| Msa0580140 | MtrunA17_Chr7g0261731 | 34.097 | 349 | 208 | 4 | 13 | 353 | 20 | 354 | 1.30e-62 | 210 |
| Msa0580140 | MtrunA17_Chr1g0157621 | 27.632 | 532 | 346 | 10 | 53 | 568 | 9 | 517 | 2.49e-62 | 215 |
| Msa0580140 | MtrunA17_Chr2g0325961 | 28.261 | 552 | 366 | 11 | 26 | 571 | 21 | 548 | 5.01e-62 | 214 |
| Msa0580140 | MtrunA17_Chr2g0325951 | 28.136 | 558 | 358 | 15 | 26 | 571 | 21 | 547 | 7.81e-62 | 213 |
| Msa0580140 | MtrunA17_Chr7g0235521 | 29.299 | 471 | 298 | 8 | 115 | 568 | 4 | 456 | 1.45e-60 | 208 |
| Msa0580140 | MtrunA17_Chr7g0240131 | 29.299 | 471 | 298 | 8 | 115 | 568 | 4 | 456 | 3.09e-60 | 207 |
| Msa0580140 | MtrunA17_Chr7g0240211 | 29.550 | 467 | 294 | 8 | 119 | 568 | 8 | 456 | 8.17e-60 | 206 |
| Msa0580140 | MtrunA17_Chr7g0240181 | 29.299 | 471 | 298 | 8 | 115 | 568 | 4 | 456 | 1.08e-59 | 206 |
| Msa0580140 | MtrunA17_Chr4g0060061 | 71.545 | 123 | 35 | 0 | 133 | 255 | 6 | 128 | 2.11e-58 | 191 |
| Msa0580140 | MtrunA17_Chr2g0326211 | 26.306 | 555 | 372 | 12 | 26 | 571 | 21 | 547 | 4.41e-58 | 203 |
| Msa0580140 | MtrunA17_Chr1g0177591 | 27.094 | 561 | 351 | 15 | 24 | 565 | 42 | 563 | 1.42e-57 | 202 |
| Msa0580140 | MtrunA17_Chr2g0331511 | 26.071 | 560 | 373 | 12 | 26 | 565 | 23 | 561 | 6.13e-57 | 202 |
| Msa0580140 | MtrunA17_Chr3g0112631 | 37.132 | 272 | 158 | 5 | 311 | 571 | 3 | 272 | 5.99e-54 | 185 |
| Msa0580140 | MtrunA17_Chr3g0142121 | 39.921 | 253 | 140 | 5 | 315 | 566 | 22 | 263 | 1.19e-53 | 184 |
| Msa0580140 | MtrunA17_Chr3g0142111 | 39.271 | 247 | 149 | 1 | 13 | 259 | 35 | 280 | 1.61e-53 | 185 |
| Msa0580140 | MtrunA17_Chr4g0060051 | 78.704 | 108 | 23 | 0 | 3 | 110 | 1 | 108 | 3.13e-53 | 177 |
| Msa0580140 | MtrunA17_Chr7g0240151 | 28.025 | 471 | 286 | 9 | 115 | 568 | 4 | 438 | 5.99e-53 | 187 |
| Msa0580140 | MtrunA17_Chr2g0331461 | 27.562 | 566 | 355 | 13 | 27 | 565 | 28 | 565 | 1.74e-51 | 187 |
| Msa0580140 | MtrunA17_Chr1g0177631 | 30.227 | 440 | 257 | 13 | 145 | 565 | 26 | 434 | 6.16e-50 | 179 |
| Msa0580140 | MtrunA17_Chr1g0177611 | 28.634 | 454 | 274 | 13 | 131 | 565 | 12 | 434 | 1.77e-48 | 174 |
| Msa0580140 | MtrunA17_Chr7g0261721 | 41.117 | 197 | 114 | 2 | 374 | 570 | 6 | 200 | 6.46e-38 | 140 |
| Msa0580140 | MtrunA17_Chr3g0112651 | 37.584 | 149 | 90 | 2 | 111 | 259 | 21 | 166 | 3.68e-24 | 100 |
| Msa0580140 | MtrunA17_Chr2g0326221 | 29.661 | 236 | 126 | 8 | 342 | 572 | 24 | 224 | 4.68e-19 | 86.3 |
| Msa0580140 | MtrunA17_Chr7g0261671 | 34.188 | 117 | 70 | 1 | 1 | 110 | 2 | 118 | 3.11e-17 | 78.2 |
| Msa0580140 | MtrunA17_Chr1g0147591 | 26.761 | 213 | 117 | 6 | 152 | 346 | 9 | 200 | 2.17e-16 | 78.2 |
| Msa0580140 | MtrunA17_Chr4g0014851 | 37.755 | 98 | 61 | 0 | 13 | 110 | 19 | 116 | 7.82e-14 | 69.7 |
| Msa0580140 | MtrunA17_Chr7g0261831 | 33.071 | 127 | 78 | 4 | 292 | 412 | 29 | 154 | 2.72e-13 | 69.3 |
| Msa0580140 | MtrunA17_Chr1g0166721 | 33.673 | 98 | 65 | 0 | 13 | 110 | 14 | 111 | 4.25e-13 | 67.0 |
| Msa0580140 | MtrunA17_Chr7g0234171 | 41.096 | 73 | 43 | 0 | 38 | 110 | 4 | 76 | 5.16e-13 | 64.7 |
| Msa0580140 | MtrunA17_Chr7g0234371 | 41.096 | 73 | 43 | 0 | 38 | 110 | 8 | 80 | 1.25e-12 | 63.5 |
| Msa0580140 | MtrunA17_Chr7g0234141 | 41.096 | 73 | 43 | 0 | 38 | 110 | 8 | 80 | 1.25e-12 | 63.5 |
| Msa0580140 | MtrunA17_Chr3g0112661 | 35.714 | 98 | 63 | 0 | 13 | 110 | 20 | 117 | 5.48e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580140 | AT1G69850.1 | 70.068 | 588 | 160 | 7 | 1 | 576 | 1 | 584 | 0.0 | 823 |
| Msa0580140 | AT1G27040.1 | 65.120 | 582 | 179 | 7 | 1 | 575 | 1 | 565 | 0.0 | 728 |
| Msa0580140 | AT1G27040.2 | 65.620 | 573 | 174 | 6 | 9 | 575 | 6 | 561 | 0.0 | 726 |
| Msa0580140 | AT5G62730.1 | 62.457 | 586 | 178 | 8 | 1 | 571 | 27 | 585 | 0.0 | 716 |
| Msa0580140 | AT1G27040.3 | 65.193 | 543 | 166 | 6 | 39 | 575 | 8 | 533 | 0.0 | 676 |
| Msa0580140 | AT5G62730.2 | 62.568 | 553 | 169 | 6 | 30 | 571 | 1 | 526 | 0.0 | 675 |
| Msa0580140 | AT1G59740.1 | 39.894 | 564 | 304 | 8 | 15 | 565 | 30 | 571 | 4.38e-134 | 404 |
| Msa0580140 | AT3G25260.1 | 39.825 | 570 | 286 | 11 | 1 | 568 | 1 | 515 | 2.72e-133 | 399 |
| Msa0580140 | AT3G25280.1 | 39.177 | 559 | 290 | 10 | 14 | 568 | 9 | 521 | 1.80e-129 | 389 |
| Msa0580140 | AT3G54140.1 | 37.113 | 582 | 334 | 8 | 3 | 571 | 1 | 563 | 1.69e-128 | 388 |
| Msa0580140 | AT3G54140.2 | 37.113 | 582 | 334 | 8 | 3 | 571 | 1 | 563 | 1.69e-128 | 388 |
| Msa0580140 | AT1G33440.1 | 39.273 | 578 | 308 | 9 | 15 | 577 | 27 | 576 | 3.19e-126 | 384 |
| Msa0580140 | AT5G01180.2 | 37.324 | 568 | 341 | 7 | 13 | 576 | 12 | 568 | 2.76e-125 | 380 |
| Msa0580140 | AT5G01180.3 | 37.324 | 568 | 341 | 7 | 13 | 576 | 12 | 568 | 2.76e-125 | 380 |
| Msa0580140 | AT5G01180.1 | 37.324 | 568 | 341 | 7 | 13 | 576 | 12 | 568 | 2.76e-125 | 380 |
| Msa0580140 | AT2G02040.1 | 36.778 | 571 | 332 | 8 | 13 | 571 | 28 | 581 | 1.46e-124 | 379 |
| Msa0580140 | AT1G12110.1 | 37.209 | 559 | 342 | 5 | 16 | 571 | 17 | 569 | 2.40e-119 | 365 |
| Msa0580140 | AT2G26690.1 | 38.669 | 556 | 328 | 6 | 15 | 569 | 13 | 556 | 2.07e-114 | 352 |
| Msa0580140 | AT1G68570.1 | 36.380 | 569 | 337 | 6 | 19 | 577 | 21 | 574 | 4.29e-112 | 347 |
| Msa0580140 | AT5G46050.1 | 36.832 | 543 | 319 | 9 | 13 | 547 | 14 | 540 | 1.71e-111 | 345 |
| Msa0580140 | AT5G46040.1 | 35.935 | 551 | 323 | 9 | 13 | 552 | 14 | 545 | 3.52e-110 | 342 |
| Msa0580140 | AT1G68570.2 | 36.679 | 548 | 327 | 5 | 40 | 577 | 7 | 544 | 4.66e-109 | 338 |
| Msa0580140 | AT3G21670.1 | 37.522 | 565 | 321 | 8 | 16 | 572 | 19 | 559 | 7.15e-109 | 338 |
| Msa0580140 | AT2G02020.1 | 32.796 | 558 | 331 | 7 | 13 | 570 | 29 | 542 | 6.42e-107 | 332 |
| Msa0580140 | AT2G26690.2 | 38.722 | 532 | 313 | 6 | 39 | 569 | 4 | 523 | 2.65e-106 | 330 |
| Msa0580140 | AT2G26690.3 | 38.846 | 520 | 305 | 6 | 51 | 569 | 4 | 511 | 3.92e-103 | 322 |
| Msa0580140 | AT1G62200.1 | 32.982 | 570 | 344 | 8 | 13 | 568 | 39 | 584 | 1.69e-101 | 319 |
| Msa0580140 | AT1G72140.1 | 33.627 | 568 | 326 | 10 | 15 | 570 | 23 | 551 | 3.86e-101 | 317 |
| Msa0580140 | AT5G13400.1 | 33.686 | 567 | 359 | 8 | 15 | 571 | 52 | 611 | 6.73e-101 | 319 |
| Msa0580140 | AT2G37900.1 | 32.474 | 582 | 348 | 9 | 4 | 571 | 16 | 566 | 1.86e-99 | 313 |
| Msa0580140 | AT1G22540.1 | 36.201 | 558 | 325 | 8 | 15 | 568 | 19 | 549 | 3.57e-99 | 312 |
| Msa0580140 | AT1G32450.1 | 32.990 | 582 | 359 | 9 | 4 | 569 | 16 | 582 | 1.14e-97 | 310 |
| Msa0580140 | AT1G62200.2 | 32.308 | 585 | 357 | 8 | 13 | 568 | 39 | 613 | 1.40e-97 | 310 |
| Msa0580140 | AT1G62200.3 | 32.308 | 585 | 357 | 8 | 13 | 568 | 53 | 627 | 2.27e-97 | 310 |
| Msa0580140 | AT3G54450.1 | 31.028 | 564 | 344 | 8 | 23 | 571 | 9 | 542 | 4.09e-96 | 304 |
| Msa0580140 | AT2G40460.1 | 32.981 | 567 | 358 | 8 | 13 | 575 | 11 | 559 | 6.55e-96 | 305 |
| Msa0580140 | AT4G21680.1 | 34.281 | 563 | 360 | 8 | 13 | 570 | 15 | 572 | 7.69e-95 | 302 |
| Msa0580140 | AT1G72125.1 | 33.625 | 571 | 339 | 9 | 12 | 571 | 15 | 556 | 3.28e-94 | 299 |
| Msa0580140 | AT3G53960.1 | 32.821 | 585 | 350 | 11 | 4 | 571 | 15 | 573 | 1.34e-93 | 299 |
| Msa0580140 | AT1G72120.1 | 33.392 | 566 | 337 | 7 | 15 | 571 | 18 | 552 | 1.33e-92 | 295 |
| Msa0580140 | AT5G19640.1 | 32.661 | 545 | 343 | 6 | 27 | 569 | 60 | 582 | 1.07e-89 | 289 |
| Msa0580140 | AT2G37900.2 | 32.749 | 513 | 304 | 7 | 71 | 571 | 4 | 487 | 8.69e-89 | 283 |
| Msa0580140 | AT1G22550.1 | 32.105 | 570 | 345 | 8 | 15 | 571 | 19 | 559 | 1.61e-88 | 285 |
| Msa0580140 | AT1G22570.1 | 33.455 | 550 | 321 | 10 | 15 | 549 | 19 | 538 | 1.78e-88 | 285 |
| Msa0580140 | AT1G72130.1 | 32.123 | 551 | 321 | 8 | 28 | 570 | 27 | 532 | 1.81e-88 | 284 |
| Msa0580140 | AT1G69870.1 | 32.000 | 550 | 364 | 6 | 26 | 571 | 51 | 594 | 7.88e-86 | 279 |
| Msa0580140 | AT5G46050.2 | 36.036 | 444 | 260 | 9 | 112 | 547 | 1 | 428 | 7.17e-85 | 272 |
| Msa0580140 | AT1G18880.1 | 30.147 | 544 | 368 | 7 | 35 | 571 | 28 | 566 | 2.54e-84 | 274 |
| Msa0580140 | AT1G22570.2 | 33.333 | 528 | 307 | 10 | 37 | 549 | 4 | 501 | 1.94e-83 | 270 |
| Msa0580140 | AT2G02020.2 | 29.412 | 561 | 325 | 8 | 13 | 570 | 29 | 521 | 6.36e-82 | 266 |
| Msa0580140 | AT5G14940.1 | 29.525 | 569 | 354 | 9 | 26 | 576 | 7 | 546 | 5.74e-76 | 251 |
| Msa0580140 | AT1G52190.1 | 27.788 | 565 | 365 | 10 | 27 | 568 | 22 | 566 | 9.72e-75 | 249 |
| Msa0580140 | AT1G72130.2 | 32.143 | 448 | 260 | 7 | 131 | 570 | 3 | 414 | 1.49e-74 | 244 |
| Msa0580140 | AT1G72130.3 | 32.143 | 448 | 260 | 7 | 131 | 570 | 3 | 414 | 1.49e-74 | 244 |
| Msa0580140 | AT1G69860.1 | 30.605 | 562 | 348 | 10 | 29 | 576 | 21 | 554 | 3.87e-74 | 246 |
| Msa0580140 | AT1G27080.1 | 30.319 | 564 | 348 | 12 | 26 | 572 | 14 | 549 | 2.81e-72 | 242 |
| Msa0580140 | AT5G62680.1 | 27.395 | 595 | 379 | 11 | 4 | 576 | 34 | 597 | 2.21e-71 | 241 |
| Msa0580140 | AT3G01350.1 | 29.242 | 554 | 347 | 10 | 32 | 563 | 13 | 543 | 4.46e-70 | 236 |
| Msa0580140 | AT3G16180.1 | 28.049 | 574 | 366 | 12 | 19 | 568 | 15 | 565 | 2.47e-69 | 234 |
| Msa0580140 | AT3G45700.1 | 29.196 | 572 | 353 | 15 | 16 | 575 | 5 | 536 | 1.30e-68 | 232 |
| Msa0580140 | AT3G45660.1 | 27.817 | 568 | 350 | 10 | 26 | 575 | 21 | 546 | 1.40e-68 | 232 |
| Msa0580140 | AT3G45660.3 | 27.817 | 568 | 350 | 10 | 26 | 575 | 21 | 546 | 1.40e-68 | 232 |
| Msa0580140 | AT3G45660.2 | 27.817 | 568 | 350 | 10 | 26 | 575 | 42 | 567 | 2.50e-68 | 232 |
| Msa0580140 | AT3G45650.1 | 28.419 | 563 | 349 | 12 | 24 | 571 | 20 | 543 | 1.01e-67 | 229 |
| Msa0580140 | AT3G45680.1 | 29.027 | 565 | 340 | 14 | 26 | 571 | 20 | 542 | 1.70e-67 | 229 |
| Msa0580140 | AT3G45710.1 | 28.970 | 573 | 344 | 13 | 22 | 571 | 12 | 544 | 1.72e-67 | 229 |
| Msa0580140 | AT1G27080.2 | 30.093 | 535 | 329 | 12 | 55 | 572 | 1 | 507 | 1.31e-66 | 226 |
| Msa0580140 | AT3G47960.1 | 28.067 | 595 | 373 | 12 | 3 | 576 | 53 | 613 | 1.85e-66 | 228 |
| Msa0580140 | AT5G28470.2 | 27.728 | 559 | 386 | 8 | 24 | 576 | 15 | 561 | 3.63e-66 | 226 |
| Msa0580140 | AT3G45720.1 | 27.799 | 536 | 329 | 13 | 53 | 571 | 46 | 540 | 8.28e-64 | 219 |
| Msa0580140 | AT3G45650.2 | 27.721 | 588 | 347 | 13 | 24 | 571 | 20 | 569 | 1.11e-63 | 219 |
| Msa0580140 | AT5G28470.1 | 27.549 | 559 | 385 | 9 | 24 | 576 | 15 | 559 | 2.95e-63 | 218 |
| Msa0580140 | AT3G45690.1 | 26.571 | 557 | 321 | 15 | 26 | 569 | 18 | 499 | 1.09e-56 | 199 |
| Msa0580140 | AT5G11570.1 | 23.933 | 539 | 323 | 13 | 29 | 563 | 16 | 471 | 4.74e-34 | 135 |
| Msa0580140 | AT2G38100.2 | 24.815 | 540 | 324 | 14 | 54 | 568 | 2 | 484 | 1.16e-32 | 132 |
| Msa0580140 | AT2G38100.3 | 24.815 | 540 | 324 | 14 | 54 | 568 | 24 | 506 | 1.89e-32 | 131 |
| Msa0580140 | AT2G38100.1 | 24.815 | 540 | 324 | 14 | 54 | 568 | 18 | 500 | 2.05e-32 | 131 |
Find 121 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACTTACTTGGGCTTCTT+TGG | 0.174961 | 4_1:-85171882 | Msa0580140:CDS |
| TCACCATCTCTCTGTCTCTT+TGG | 0.186804 | 4_1:+85180255 | None:intergenic |
| TGGCTTATGTGTGTGCTTAC+TGG | 0.186897 | 4_1:-85171737 | Msa0580140:CDS |
| GCTTGCAGCCTCCTTTGTTT+TGG | 0.197329 | 4_1:-85180018 | Msa0580140:CDS |
| TGTTTCTATTCCTGTGTTCT+TGG | 0.197840 | 4_1:-85173320 | Msa0580140:CDS |
| CTAATCCAATTCCAATTCTT+TGG | 0.201176 | 4_1:+85172131 | None:intergenic |
| ACAATTGTGCAGGCGAAAAT+TGG | 0.204867 | 4_1:+85172361 | None:intergenic |
| ACTTGGGCTTCTTTGGCTTT+AGG | 0.216133 | 4_1:-85171875 | Msa0580140:CDS |
| GATGTTTCTCCTTCCTCTTT+TGG | 0.219114 | 4_1:+85172511 | None:intergenic |
| TCTCATAAACCTTGGTTATC+TGG | 0.245304 | 4_1:-85171797 | Msa0580140:CDS |
| ATTGGGTGGAAATGGGGTTT+TGG | 0.249961 | 4_1:-85173364 | Msa0580140:CDS |
| CTTGGAGTTGGAGGAATTAA+AGG | 0.255772 | 4_1:-85173535 | Msa0580140:CDS |
| TCTCTCTGTCTCTTTGGGTT+TGG | 0.270934 | 4_1:+85180261 | None:intergenic |
| CACCATCTCTCTGTCTCTTT+GGG | 0.271268 | 4_1:+85180256 | None:intergenic |
| TGTCTCTTTGGGTTTGGATC+TGG | 0.282904 | 4_1:+85180267 | None:intergenic |
| AAGATAATATTGGGTGGAAA+TGG | 0.299950 | 4_1:-85173372 | Msa0580140:CDS |
| TTGAGTTTCCTTTGTTGCTT+TGG | 0.304193 | 4_1:+85172489 | None:intergenic |
| TAGTTGAAGTGAAAAGAAAA+AGG | 0.306946 | 4_1:-85172075 | Msa0580140:CDS |
| CACCAATTAAAATGAGATCT+TGG | 0.314329 | 4_1:-85171910 | Msa0580140:CDS |
| ATGAAGAGTACTGGGAAAAT+TGG | 0.316201 | 4_1:+85172238 | None:intergenic |
| TCAATAGTTAATAGTGTTAC+TGG | 0.316654 | 4_1:-85171827 | Msa0580140:CDS |
| CTAACATTGTTTGAATTTGT+AGG | 0.326350 | 4_1:+85172538 | None:intergenic |
| GCAACTTGGTGTTATATCTA+AGG | 0.326798 | 4_1:-85179724 | Msa0580140:CDS |
| ATAATTATGTGATCATAAAT+TGG | 0.351599 | 4_1:+85172202 | None:intergenic |
| GCGACAATGAACACGAAATT+CGG | 0.353073 | 4_1:-85172289 | Msa0580140:CDS |
| CTTGGGCTACATCACTTACT+TGG | 0.353777 | 4_1:-85171892 | Msa0580140:CDS |
| TTTGATGAGGATAATGTATC+TGG | 0.355652 | 4_1:-85173484 | Msa0580140:CDS |
| TGGCTGGTTCTACTAAATAT+AGG | 0.359945 | 4_1:-85173300 | Msa0580140:CDS |
| ATTCACTATGGCTGGTTTGT+TGG | 0.361254 | 4_1:-85171951 | Msa0580140:CDS |
| AAAATACACAAAATCAGAAA+TGG | 0.362122 | 4_1:-85172167 | Msa0580140:CDS |
| TCTCTAAATGATAATGGTTA+AGG | 0.362836 | 4_1:+85171768 | None:intergenic |
| ACTCAATAACTGCACTTATC+AGG | 0.363961 | 4_1:+85179576 | None:intergenic |
| GGAATCTTAGTGTGTCTGTT+GGG | 0.364948 | 4_1:+85172464 | None:intergenic |
| CATCTCCAAAGAATTGGAAT+TGG | 0.365619 | 4_1:-85172136 | Msa0580140:CDS |
| GTGTGGATTGAAGATAATAT+TGG | 0.370190 | 4_1:-85173382 | Msa0580140:CDS |
| AAAACCTCTCTAAATGATAA+TGG | 0.371425 | 4_1:+85171762 | None:intergenic |
| AAGTGCAGTTATTGAGTTCC+TGG | 0.371535 | 4_1:-85179570 | Msa0580140:intron |
| AGATAATATTGGGTGGAAAT+GGG | 0.372374 | 4_1:-85173371 | Msa0580140:CDS |
| ATAACACATCTCCAAAGAAT+TGG | 0.372529 | 4_1:-85172142 | Msa0580140:CDS |
| TAACAATGTGACAAATTTCA+TGG | 0.398593 | 4_1:-85179669 | Msa0580140:CDS |
| CCATGTCTGCCTCTGTGGGC+AGG | 0.399542 | 4_1:+85180047 | None:intergenic |
| TCTATTCCTGTGTTCTTGGC+TGG | 0.402338 | 4_1:-85173316 | Msa0580140:CDS |
| TTTCTTCTTGCTTTGCTTGG+TGG | 0.407544 | 4_1:-85179638 | Msa0580140:CDS |
| AAAGAAAGTGTGAGGGAGAA+GGG | 0.408215 | 4_1:+85180338 | None:intergenic |
| TTCAGCTGATCTATTCACTA+TGG | 0.413633 | 4_1:-85171963 | Msa0580140:CDS |
| AGGTACAAGTATAGAGGAAC+AGG | 0.416368 | 4_1:-85171680 | Msa0580140:CDS |
| GCTGATCTATTCACTATGGC+TGG | 0.419602 | 4_1:-85171959 | Msa0580140:CDS |
| ACCAATTAAAATGAGATCTT+GGG | 0.419871 | 4_1:-85171909 | Msa0580140:CDS |
| ACTTCATGGCATACACTTGT+TGG | 0.426627 | 4_1:+85173607 | None:intergenic |
| AGGATCATTATGAAGAGTAC+TGG | 0.426683 | 4_1:+85172229 | None:intergenic |
| TGTGGATTGAAGATAATATT+GGG | 0.431328 | 4_1:-85173381 | Msa0580140:CDS |
| GTTGAGCTAAGCAACAGTTT+AGG | 0.440014 | 4_1:+85172338 | None:intergenic |
| TAACATTGTTTGAATTTGTA+GGG | 0.440281 | 4_1:+85172539 | None:intergenic |
| CAATTGTGCAGGCGAAAATT+GGG | 0.453714 | 4_1:+85172362 | None:intergenic |
| TATAGGAATAAGATTCCTAC+TGG | 0.456355 | 4_1:-85173283 | Msa0580140:CDS |
| CTAGTTGCACTTGGAGTTGG+AGG | 0.460059 | 4_1:-85173544 | Msa0580140:CDS |
| CTTCATGGCATACACTTGTT+GGG | 0.460169 | 4_1:+85173608 | None:intergenic |
| AAATTTCCATTCATCAGTAA+TGG | 0.465039 | 4_1:+85171654 | None:intergenic |
| AAAAGGGTAGCAACAAATCA+TGG | 0.472365 | 4_1:-85172058 | Msa0580140:CDS |
| TAAAGAAAGTGTGAGGGAGA+AGG | 0.473175 | 4_1:+85180337 | None:intergenic |
| GCCACCATGTCTGCCTCTGT+GGG | 0.485303 | 4_1:+85180043 | None:intergenic |
| TACCTAGTTGCACTTGGAGT+TGG | 0.486118 | 4_1:-85173547 | Msa0580140:CDS |
| TCTGGAGAGAGAGATTTATG+AGG | 0.490261 | 4_1:+85180285 | None:intergenic |
| TTGGGCTACATCACTTACTT+GGG | 0.491140 | 4_1:-85171891 | Msa0580140:CDS |
| AGGAAACCATTACTGATGAA+TGG | 0.492725 | 4_1:-85171660 | Msa0580140:exon |
| AAATACACAAAATCAGAAAT+GGG | 0.500079 | 4_1:-85172166 | Msa0580140:CDS |
| TGCCACCATGTCTGCCTCTG+TGG | 0.506109 | 4_1:+85180042 | None:intergenic |
| TCTAGCAAATGCAAGCAACT+TGG | 0.510917 | 4_1:-85179738 | Msa0580140:CDS |
| AGTGTATGCCATGAAGTTCA+TGG | 0.513512 | 4_1:-85173601 | Msa0580140:CDS |
| GATAATATTGGGTGGAAATG+GGG | 0.515456 | 4_1:-85173370 | Msa0580140:CDS |
| AGGAATCTTAGTGTGTCTGT+TGG | 0.520934 | 4_1:+85172463 | None:intergenic |
| AACAACAACAAGGGACAAGA+TGG | 0.521130 | 4_1:-85180097 | Msa0580140:CDS |
| CCTGCCCACAGAGGCAGACA+TGG | 0.525390 | 4_1:-85180047 | Msa0580140:CDS |
| CAATGTTAGAAAACCAAAAG+AGG | 0.530577 | 4_1:-85172524 | Msa0580140:CDS |
| AACAATGTGACAAATTTCAT+GGG | 0.532301 | 4_1:-85179668 | Msa0580140:CDS |
| GTTTACCACAGCACTACTGC+TGG | 0.533194 | 4_1:+85172573 | None:intergenic |
| GAATCTTAGTGTGTCTGTTG+GGG | 0.535764 | 4_1:+85172465 | None:intergenic |
| ACAGTTTAGGACAATTGTGC+AGG | 0.536248 | 4_1:+85172351 | None:intergenic |
| CAACAAGGGACAAGATGGAT+TGG | 0.537603 | 4_1:-85180092 | Msa0580140:CDS |
| GCAAAAGCATTAATGTTGTA+TGG | 0.537605 | 4_1:-85173577 | Msa0580140:CDS |
| GTAATTCCTCTCATAAACCT+TGG | 0.540710 | 4_1:-85171805 | Msa0580140:CDS |
| GACAAGATGGATTGGCTATG+TGG | 0.540732 | 4_1:-85180084 | Msa0580140:CDS |
| GAAGATTTAAAGAAAGTGTG+AGG | 0.542111 | 4_1:+85180330 | None:intergenic |
| AAGATTTAAAGAAAGTGTGA+GGG | 0.549730 | 4_1:+85180331 | None:intergenic |
| CTCCAACTCCAAGTGCAACT+AGG | 0.549944 | 4_1:+85173545 | None:intergenic |
| GCAATTAGGTACAAGTATAG+AGG | 0.553785 | 4_1:-85171686 | Msa0580140:CDS |
| AGAAACATCCAAAGCAACAA+AGG | 0.554674 | 4_1:-85172497 | Msa0580140:CDS |
| AGTCTTATCTATAATTGCAA+TGG | 0.561438 | 4_1:-85172110 | Msa0580140:CDS |
| GAAAGTGTGAGGGAGAAGGG+AGG | 0.564778 | 4_1:+85180341 | None:intergenic |
| TGTGATCATAAATTGGTGCT+AGG | 0.568432 | 4_1:+85172209 | None:intergenic |
| GATGGATTGGCTATGTGGAC+TGG | 0.572196 | 4_1:-85180079 | Msa0580140:CDS |
| GGGAAAATTGGTAATGAAGC+TGG | 0.573522 | 4_1:+85172250 | None:intergenic |
| TTCATCTTTAGCTTAGCATG+TGG | 0.577594 | 4_1:-85173430 | Msa0580140:CDS |
| GGACTATACCTAGTTGCACT+TGG | 0.578612 | 4_1:-85173553 | Msa0580140:CDS |
| ACACTTGTTGGGTCACATGA+TGG | 0.581080 | 4_1:+85173619 | None:intergenic |
| GTTAGAAAACCAAAAGAGGA+AGG | 0.586056 | 4_1:-85172520 | Msa0580140:CDS |
| CAGGAACTTGAACAACAACA+AGG | 0.587841 | 4_1:-85180107 | Msa0580140:CDS |
| GGATCATTATGAAGAGTACT+GGG | 0.590767 | 4_1:+85172230 | None:intergenic |
| TTAACCATTATCATTTAGAG+AGG | 0.593168 | 4_1:-85171766 | Msa0580140:CDS |
| GAATTTCGTGTTCATTGTCG+CGG | 0.624587 | 4_1:+85172291 | None:intergenic |
| GTAGTAAGAGGACTTCCAGT+AGG | 0.626038 | 4_1:+85173268 | None:intergenic |
| GTAGAACCAGCCAAGAACAC+AGG | 0.628921 | 4_1:+85173310 | None:intergenic |
| TTGTGCAGGCGAAAATTGGG+AGG | 0.629307 | 4_1:+85172365 | None:intergenic |
| AAATTCCAGCAGTAGTGCTG+TGG | 0.634862 | 4_1:-85172578 | Msa0580140:CDS |
| ATGAGGATAATGTATCTGGA+AGG | 0.635091 | 4_1:-85173480 | Msa0580140:CDS |
| CTTGTTGGGTCACATGATGG+TGG | 0.636661 | 4_1:+85173622 | None:intergenic |
| AACCCAAAGAGACAGAGAGA+TGG | 0.639300 | 4_1:-85180258 | Msa0580140:intron |
| TTGAGACATACCCAAAACAA+AGG | 0.642763 | 4_1:+85180007 | None:intergenic |
| GCCCACAGAGGCAGACATGG+TGG | 0.657251 | 4_1:-85180044 | Msa0580140:CDS |
| AAAGCATTAATGTTGTATGG+TGG | 0.660443 | 4_1:-85173574 | Msa0580140:CDS |
| AGATAACCAAGGTTTATGAG+AGG | 0.665755 | 4_1:+85171799 | None:intergenic |
| AGGTTTGAACCAGATAACCA+AGG | 0.672871 | 4_1:+85171788 | None:intergenic |
| AGACATACCCAAAACAAAGG+AGG | 0.689617 | 4_1:+85180010 | None:intergenic |
| GGATTGGCTATGTGGACTGG+AGG | 0.694140 | 4_1:-85180076 | Msa0580140:CDS |
| AAAGGATCATTAGCACCACA+TGG | 0.699039 | 4_1:-85173517 | Msa0580140:CDS |
| TGGTGCTGAGCAATTTGATG+AGG | 0.700870 | 4_1:-85173497 | Msa0580140:CDS |
| AGGAACTTGAACAACAACAA+GGG | 0.701427 | 4_1:-85180106 | Msa0580140:CDS |
| TCAAATTGCTCAGCACCATG+TGG | 0.715025 | 4_1:+85173502 | None:intergenic |
| GGATTGAAGATAATATTGGG+TGG | 0.716012 | 4_1:-85173378 | Msa0580140:CDS |
| AGGAACAGACCTGCCCACAG+AGG | 0.733486 | 4_1:-85180056 | Msa0580140:CDS |
| AAAATTGGTAATGAAGCTGG+TGG | 0.772638 | 4_1:+85172253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATATTTTTTTTTAAAGA+AGG | + | chr4_1:85172006-85172025 | None:intergenic | 10.0% |
| !! | TAAATTAAATTAAACAATCT+GGG | + | chr4_1:85172118-85172137 | None:intergenic | 10.0% |
| !!! | TGTTTAATTTAATTTACTTT+TGG | - | chr4_1:85172122-85172141 | Msa0580140:CDS | 10.0% |
| !! | TAAATAATAAATGCAAAAAT+AGG | + | chr4_1:85172533-85172552 | None:intergenic | 10.0% |
| !!! | TATTTTTGCATTTATTATTT+AGG | - | chr4_1:85172532-85172551 | Msa0580140:CDS | 10.0% |
| !! | TATAAAATATTCTACATATT+AGG | - | chr4_1:85172675-85172694 | Msa0580140:intron | 10.0% |
| !!! | AAAATTTATTTATTTTGTCT+TGG | - | chr4_1:85173235-85173254 | Msa0580140:intron | 10.0% |
| !! | ATAAAATAATGAAAACTTAA+AGG | + | chr4_1:85173357-85173376 | None:intergenic | 10.0% |
| !! | AAAAAAAGATATATATTTAG+AGG | + | chr4_1:85173446-85173465 | None:intergenic | 10.0% |
| !!! | TTTTTTTATTTAAATAAACG+TGG | + | chr4_1:85173566-85173585 | None:intergenic | 10.0% |
| !! | ATTTAATATTACAAAATAGA+AGG | - | chr4_1:85173628-85173647 | Msa0580140:CDS | 10.0% |
| !! | TTTAATATTACAAAATAGAA+GGG | - | chr4_1:85173629-85173648 | Msa0580140:CDS | 10.0% |
| !! | ATTTAATATTACAAAATAGA+AGG | - | chr4_1:85173628-85173647 | Msa0580140:CDS | 10.0% |
| !! | TTTAATATTACAAAATAGAA+GGG | - | chr4_1:85173629-85173648 | Msa0580140:CDS | 10.0% |
| !! | TATGATATAATTTAATATTG+CGG | - | chr4_1:85173697-85173716 | Msa0580140:intron | 10.0% |
| !!! | AAAATAACAATAATTTTAAG+TGG | - | chr4_1:85174900-85174919 | Msa0580140:intron | 10.0% |
| !!! | AAATAACAATAATTTTAAGT+GGG | - | chr4_1:85174901-85174920 | Msa0580140:intron | 10.0% |
| !!! | TGAATTAATTTAAAATATGT+AGG | - | chr4_1:85175014-85175033 | Msa0580140:intron | 10.0% |
| !!! | ATTTTTCATCAAAAATTATT+TGG | - | chr4_1:85175435-85175454 | Msa0580140:intron | 10.0% |
| !!! | ATTTACATTTTTTATTGATT+TGG | + | chr4_1:85176846-85176865 | None:intergenic | 10.0% |
| !! | AAAAAAAAGATTAAGGAATA+TGG | + | chr4_1:85171752-85171771 | None:intergenic | 15.0% |
| !! | AAGAAGAAAAAAAAAGATTA+AGG | + | chr4_1:85171759-85171778 | None:intergenic | 15.0% |
| !! | GTAAATTAAATTAAACAATC+TGG | + | chr4_1:85172119-85172138 | None:intergenic | 15.0% |
| !!! | ATTTAATTTACTTTTGGAAA+TGG | - | chr4_1:85172128-85172147 | Msa0580140:CDS | 15.0% |
| !!! | TCAATTTAGTTTTTGTTTAA+AGG | - | chr4_1:85172652-85172671 | Msa0580140:intron | 15.0% |
| !!! | TTGTTTTAATAGATTTTTAG+TGG | - | chr4_1:85172988-85173007 | Msa0580140:intron | 15.0% |
| !!! | AATATAGGAATTTTTTAAGT+TGG | - | chr4_1:85173303-85173322 | Msa0580140:CDS | 15.0% |
| !!! | TGCTTTTTTTATAAAATAGA+AGG | - | chr4_1:85173589-85173608 | Msa0580140:CDS | 15.0% |
| !!! | GCTTTTTTTATAAAATAGAA+GGG | - | chr4_1:85173590-85173609 | Msa0580140:CDS | 15.0% |
| !!! | CTTTTTTTATAAAATAGAAG+GGG | - | chr4_1:85173591-85173610 | Msa0580140:CDS | 15.0% |
| !! | TTAATATTACAAAATAGAAG+GGG | - | chr4_1:85173630-85173649 | Msa0580140:CDS | 15.0% |
| !! | ATGATATAATTTAATATTGC+GGG | - | chr4_1:85173698-85173717 | Msa0580140:intron | 15.0% |
| !!! | ATTTTTTCTAGGATTTATAT+TGG | + | chr4_1:85173835-85173854 | None:intergenic | 15.0% |
| !!! | TCTTTTCAATTATTTTTTCT+AGG | + | chr4_1:85173846-85173865 | None:intergenic | 15.0% |
| !!! | ATGAAGTCTATATTTTTTTA+CGG | - | chr4_1:85174120-85174139 | Msa0580140:intron | 15.0% |
| !! | TTTGAATATAAATTTATAGG+TGG | + | chr4_1:85174354-85174373 | None:intergenic | 15.0% |
| !!! | ATACATTTTATAGAAATGTA+AGG | + | chr4_1:85174472-85174491 | None:intergenic | 15.0% |
| !!! | AATAACAATAATTTTAAGTG+GGG | - | chr4_1:85174902-85174921 | Msa0580140:intron | 15.0% |
| !! | GATGAAAAATTATGTAATAA+AGG | + | chr4_1:85175425-85175444 | None:intergenic | 15.0% |
| !!! | AAAATATTTTAGCAAAACTT+GGG | + | chr4_1:85175978-85175997 | None:intergenic | 15.0% |
| !!! | TAAAATATTTTAGCAAAACT+TGG | + | chr4_1:85175979-85175998 | None:intergenic | 15.0% |
| !!! | TTATTTTGCTTTTATAGATT+AGG | - | chr4_1:85176407-85176426 | Msa0580140:intron | 15.0% |
| !! | TTATTCGAATAAATAAACTA+GGG | + | chr4_1:85177478-85177497 | None:intergenic | 15.0% |
| !! | TTTATTCGAATAAATAAACT+AGG | + | chr4_1:85177479-85177498 | None:intergenic | 15.0% |
| !! | CAATTGTTTATAAATATGAT+CGG | + | chr4_1:85178124-85178143 | None:intergenic | 15.0% |
| !! | TAAATGCAAAAACTAAAATT+CGG | + | chr4_1:85178877-85178896 | None:intergenic | 15.0% |
| !!! | CTTTTACTAAAATGATTTAT+TGG | + | chr4_1:85179209-85179228 | None:intergenic | 15.0% |
| !!! | ATTAATGATACTATTTTTCA+AGG | + | chr4_1:85179253-85179272 | None:intergenic | 15.0% |
| !! | ATTAATGAAAAATAGTTACA+TGG | + | chr4_1:85179295-85179314 | None:intergenic | 15.0% |
| !! | ATAATTATGTGATCATAAAT+TGG | + | chr4_1:85179758-85179777 | None:intergenic | 15.0% |
| !!! | GTAAAAATCAAAATTTTCAA+AGG | - | chr4_1:85180331-85180350 | Msa0580140:five_prime_UTR | 15.0% |
| !!! | TTTCAATGTGATTTTATTTC+TGG | - | chr4_1:85172555-85172574 | Msa0580140:CDS | 20.0% |
| !! | AATACGAACAAAATTTCATA+AGG | - | chr4_1:85172710-85172729 | Msa0580140:intron | 20.0% |
| !! | GAAAAACTAAAAACAAAAAG+TGG | - | chr4_1:85172748-85172767 | Msa0580140:intron | 20.0% |
| !! | TCTATTAAAACAAATAGTCT+TGG | + | chr4_1:85172981-85173000 | None:intergenic | 20.0% |
| !!! | TATATTTTTCTGTTTGTTGA+CGG | + | chr4_1:85173158-85173177 | None:intergenic | 20.0% |
| !!! | AGAAAAATATATTTTGTCTG+AGG | - | chr4_1:85173167-85173186 | Msa0580140:intron | 20.0% |
| !! | ATCGCAAAAAAGATAAATAT+AGG | - | chr4_1:85173288-85173307 | Msa0580140:CDS | 20.0% |
| !! | TTTATTTAAATAAACGTGGA+AGG | + | chr4_1:85173562-85173581 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAGATTCACAAA+GGG | + | chr4_1:85173918-85173937 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAAGATTCACAA+AGG | + | chr4_1:85173919-85173938 | None:intergenic | 20.0% |
| !!! | CTTTTTCTTTTTTGATGTAT+TGG | - | chr4_1:85173927-85173946 | Msa0580140:intron | 20.0% |
| !! | CATAAATATAAGTTTACAAG+TGG | + | chr4_1:85174244-85174263 | None:intergenic | 20.0% |
| !!! | TGATAGATCAGTTTAAAATT+TGG | + | chr4_1:85174636-85174655 | None:intergenic | 20.0% |
| !! | ATTACTACTATAGTAGATAT+AGG | + | chr4_1:85174942-85174961 | None:intergenic | 20.0% |
| !! | ATTTCATAAATTACTAGAGT+AGG | + | chr4_1:85175244-85175263 | None:intergenic | 20.0% |
| !! | AAAATTAGAGTATGTTATGA+TGG | + | chr4_1:85175286-85175305 | None:intergenic | 20.0% |
| !! | TAAAGTAGTTAAAAACTGAT+TGG | - | chr4_1:85175373-85175392 | Msa0580140:intron | 20.0% |
| !! | AAAGTAGTTAAAAACTGATT+GGG | - | chr4_1:85175374-85175393 | Msa0580140:intron | 20.0% |
| !!! | CCTAATCTTTTAAGATAAAT+AGG | + | chr4_1:85175570-85175589 | None:intergenic | 20.0% |
| !! | CCTATTTATCTTAAAAGATT+AGG | - | chr4_1:85175567-85175586 | Msa0580140:intron | 20.0% |
| !!! | ATTATTAAAAAGTGCTTTCT+TGG | - | chr4_1:85175950-85175969 | Msa0580140:intron | 20.0% |
| !!! | AAATATTTTAGCAAAACTTG+GGG | + | chr4_1:85175977-85175996 | None:intergenic | 20.0% |
| !!! | GTACTCAATATGATATATTT+TGG | - | chr4_1:85176150-85176169 | Msa0580140:intron | 20.0% |
| !!! | ATATATTTTGGTACACAATT+GGG | - | chr4_1:85176162-85176181 | Msa0580140:intron | 20.0% |
| !!! | ACATTTTTTATTGATTTGGA+AGG | + | chr4_1:85176842-85176861 | None:intergenic | 20.0% |
| !! | AAACGTTAAATAAAATCAAG+AGG | - | chr4_1:85176938-85176957 | Msa0580140:intron | 20.0% |
| !!! | GAGATATTATTATTTTTCCT+AGG | + | chr4_1:85177237-85177256 | None:intergenic | 20.0% |
| !! | TTTAATGAAGTAAAAAGAAC+CGG | + | chr4_1:85177272-85177291 | None:intergenic | 20.0% |
| !! | TGTAATCATAACTAAGTAAA+CGG | + | chr4_1:85177371-85177390 | None:intergenic | 20.0% |
| !! | ATAGTAAAGTTAAGATCTAA+AGG | - | chr4_1:85177406-85177425 | Msa0580140:intron | 20.0% |
| !! | TATTCGAATAAATAAACTAG+GGG | + | chr4_1:85177477-85177496 | None:intergenic | 20.0% |
| !!! | TAAATCATGAAACTTCTTTT+GGG | + | chr4_1:85177525-85177544 | None:intergenic | 20.0% |
| !!! | ATAAATCATGAAACTTCTTT+TGG | + | chr4_1:85177526-85177545 | None:intergenic | 20.0% |
| !! | AAAAAATATGCCATACTTAA+AGG | - | chr4_1:85177722-85177741 | Msa0580140:intron | 20.0% |
| !! | TGATAGTAGAATACAATAAA+TGG | - | chr4_1:85177791-85177810 | Msa0580140:intron | 20.0% |
| !!! | TTTAATTTGTATACTTCTTC+TGG | + | chr4_1:85178227-85178246 | None:intergenic | 20.0% |
| !! | AATTCTTAAACTTGTACTAA+GGG | - | chr4_1:85178249-85178268 | Msa0580140:intron | 20.0% |
| !! | TTGGTTAAATCGAAATAAAA+GGG | + | chr4_1:85178761-85178780 | None:intergenic | 20.0% |
| !! | ATTGGTTAAATCGAAATAAA+AGG | + | chr4_1:85178762-85178781 | None:intergenic | 20.0% |
| !!! | GTTTGATTTTAGTTATATTG+CGG | - | chr4_1:85178841-85178860 | Msa0580140:intron | 20.0% |
| !!! | TATTTAGGTAATGGTTTAAT+TGG | + | chr4_1:85178947-85178966 | None:intergenic | 20.0% |
| !! | ACAATAAGATATTTAGGTAA+TGG | + | chr4_1:85178956-85178975 | None:intergenic | 20.0% |
| !! | TTACCTAAATATCTTATTGT+TGG | - | chr4_1:85178956-85178975 | Msa0580140:intron | 20.0% |
| !! | AAACCAACAATAAGATATTT+AGG | + | chr4_1:85178962-85178981 | None:intergenic | 20.0% |
| !!! | TTTTTCATTAATGTAACCTA+TGG | - | chr4_1:85179303-85179322 | Msa0580140:intron | 20.0% |
| !! | TAACATTGTTTGAATTTGTA+GGG | + | chr4_1:85179421-85179440 | None:intergenic | 20.0% |
| !! | AAAATACACAAAATCAGAAA+TGG | - | chr4_1:85179790-85179809 | Msa0580140:intron | 20.0% |
| !! | AAATACACAAAATCAGAAAT+GGG | - | chr4_1:85179791-85179810 | Msa0580140:intron | 20.0% |
| !! | CAAAAAAATGTTATTGGTAT+TGG | + | chr4_1:85179947-85179966 | None:intergenic | 20.0% |
| !!! | CAATACCAATAACATTTTTT+TGG | - | chr4_1:85179945-85179964 | Msa0580140:intron | 20.0% |
| !! | AAGATTTAAAGAAAGTGTGA+GGG | + | chr4_1:85171629-85171648 | None:intergenic | 25.0% |
| !!! | AATTTTCACACTTTTTTTGC+AGG | - | chr4_1:85171831-85171850 | Msa0580140:CDS | 25.0% |
| ! | AATTGAATTATGATCTTCGT+CGG | + | chr4_1:85172054-85172073 | None:intergenic | 25.0% |
| !!! | TTTTTTATGTTTTTGTGCAG+TGG | - | chr4_1:85172171-85172190 | Msa0580140:CDS | 25.0% |
| ! | TAACAATGTGACAAATTTCA+TGG | - | chr4_1:85172288-85172307 | Msa0580140:CDS | 25.0% |
| ! | AACAATGTGACAAATTTCAT+GGG | - | chr4_1:85172289-85172308 | Msa0580140:CDS | 25.0% |
| ! | ATGAAGAAAAGTAAGAAGTA+AGG | + | chr4_1:85172419-85172438 | None:intergenic | 25.0% |
| !!! | TTTGGTGTTTCATTTTAGTA+CGG | - | chr4_1:85172622-85172641 | Msa0580140:intron | 25.0% |
| !! | ATAAATTTTGTCTTTTGCCT+CGG | + | chr4_1:85173224-85173243 | None:intergenic | 25.0% |
| ! | AAGAATTTCAGTGACAATTT+AGG | + | chr4_1:85174159-85174178 | None:intergenic | 25.0% |
| ! | AATATAAATTTATAGGTGGC+TGG | + | chr4_1:85174350-85174369 | None:intergenic | 25.0% |
| !! | CATTTTATAGAAATGTAAGG+TGG | + | chr4_1:85174469-85174488 | None:intergenic | 25.0% |
| !!! | AAAGAAATTACCCCATTTTT+AGG | - | chr4_1:85174714-85174733 | Msa0580140:intron | 25.0% |
| !! | AAAGAAAACGAAAAGCATAT+AGG | - | chr4_1:85174774-85174793 | Msa0580140:intron | 25.0% |
| !!! | TCGTTTGTCTTTGTTATTTT+GGG | + | chr4_1:85174852-85174871 | None:intergenic | 25.0% |
| !!! | TTCGTTTGTCTTTGTTATTT+TGG | + | chr4_1:85174853-85174872 | None:intergenic | 25.0% |
| ! | ATGAATTGTAAATAATGTGG+GGG | + | chr4_1:85175046-85175065 | None:intergenic | 25.0% |
| ! | CATGAATTGTAAATAATGTG+GGG | + | chr4_1:85175047-85175066 | None:intergenic | 25.0% |
| ! | GCATGAATTGTAAATAATGT+GGG | + | chr4_1:85175048-85175067 | None:intergenic | 25.0% |
| ! | TGCATGAATTGTAAATAATG+TGG | + | chr4_1:85175049-85175068 | None:intergenic | 25.0% |
| !! | ATATAGCAATGGTTTTTGAA+AGG | + | chr4_1:85175210-85175229 | None:intergenic | 25.0% |
| ! | TTTCAAAAACCATTGCTATA+TGG | - | chr4_1:85175209-85175228 | Msa0580140:intron | 25.0% |
| !! | TATAGTGATGGGAATAAATT+AGG | - | chr4_1:85175463-85175482 | Msa0580140:intron | 25.0% |
| ! | CTCTATTTAAGAAAAAAGTC+TGG | + | chr4_1:85175525-85175544 | None:intergenic | 25.0% |
| ! | TTCTTAAATAGAGAAGACAT+AGG | - | chr4_1:85175532-85175551 | Msa0580140:intron | 25.0% |
| ! | TCATATTTACTTGAATATGC+CGG | + | chr4_1:85175630-85175649 | None:intergenic | 25.0% |
| !! | ATAACCAACATGAGTTTTTA+GGG | + | chr4_1:85175796-85175815 | None:intergenic | 25.0% |
| !! | AATAACCAACATGAGTTTTT+AGG | + | chr4_1:85175797-85175816 | None:intergenic | 25.0% |
| ! | ATAATCTTAGGTCAAAAGTT+GGG | + | chr4_1:85175827-85175846 | None:intergenic | 25.0% |
| ! | TATAATCTTAGGTCAAAAGT+TGG | + | chr4_1:85175828-85175847 | None:intergenic | 25.0% |
| ! | TTTGACCTAAGATTATATAG+TGG | - | chr4_1:85175831-85175850 | Msa0580140:intron | 25.0% |
| ! | TTGACCTAAGATTATATAGT+GGG | - | chr4_1:85175832-85175851 | Msa0580140:intron | 25.0% |
| !!! | GAATGCAATCTAGAATATTT+TGG | - | chr4_1:85175999-85176018 | Msa0580140:intron | 25.0% |
| !!! | GAACACAATCTGAAATATTT+TGG | - | chr4_1:85176021-85176040 | Msa0580140:intron | 25.0% |
| !!! | ACAATCTGAAATATTTTGGT+AGG | - | chr4_1:85176025-85176044 | Msa0580140:intron | 25.0% |
| !!! | GATATATTTTGGTACACAAT+TGG | - | chr4_1:85176161-85176180 | Msa0580140:intron | 25.0% |
| ! | ACTAATAAGTGAGAAACTTT+GGG | + | chr4_1:85176217-85176236 | None:intergenic | 25.0% |
| ! | AACTAATAAGTGAGAAACTT+TGG | + | chr4_1:85176218-85176237 | None:intergenic | 25.0% |
| !!! | TTCATTGCTACATTTGTTTT+AGG | - | chr4_1:85176498-85176517 | Msa0580140:intron | 25.0% |
| !!! | CTTTTAAAAAGAAGTTAGAG+TGG | + | chr4_1:85176900-85176919 | None:intergenic | 25.0% |
| ! | TAATATGAATGTGATCAAAG+TGG | - | chr4_1:85177158-85177177 | Msa0580140:intron | 25.0% |
| ! | ATATCTCAATTAGATTTAGC+CGG | - | chr4_1:85177250-85177269 | Msa0580140:intron | 25.0% |
| ! | AAAACAAGAAAAACATGCTA+AGG | - | chr4_1:85177580-85177599 | Msa0580140:intron | 25.0% |
| !!! | TATGGCATATTTTTTCAGAA+TGG | + | chr4_1:85177717-85177736 | None:intergenic | 25.0% |
| !!! | GATACCTCATTGTTTATTTT+GGG | + | chr4_1:85177748-85177767 | None:intergenic | 25.0% |
| ! | TATTCCTTTATCTAAAGATG+TGG | - | chr4_1:85177831-85177850 | Msa0580140:intron | 25.0% |
| !! | TCTTTATATGATCGCATTTT+AGG | - | chr4_1:85177859-85177878 | Msa0580140:intron | 25.0% |
| !!! | TCTTGGTGAATGTTTTAAAA+TGG | - | chr4_1:85178058-85178077 | Msa0580140:intron | 25.0% |
| ! | TTGTTTATAAATATGATCGG+AGG | + | chr4_1:85178121-85178140 | None:intergenic | 25.0% |
| ! | CAATTCTTAAACTTGTACTA+AGG | - | chr4_1:85178248-85178267 | Msa0580140:intron | 25.0% |
| !! | TGTGGATTGAAGATAATATT+GGG | - | chr4_1:85178576-85178595 | Msa0580140:intron | 25.0% |
| !!! | TTGTTAGTTTTCAGTTAAAC+CGG | + | chr4_1:85178809-85178828 | None:intergenic | 25.0% |
| !! | AAACTAACAAATTTGTTTGC+TGG | - | chr4_1:85178819-85178838 | Msa0580140:intron | 25.0% |
| !!! | ATTTTAGTTATATTGCGGAA+TGG | - | chr4_1:85178846-85178865 | Msa0580140:intron | 25.0% |
| !!! | CTTATTGTTGGTTTGATTAA+TGG | - | chr4_1:85178968-85178987 | Msa0580140:intron | 25.0% |
| ! | CTAACATTGTTTGAATTTGT+AGG | + | chr4_1:85179422-85179441 | None:intergenic | 25.0% |
| !! | TTTGTGTATTTTCTTGCAAA+GGG | + | chr4_1:85179782-85179801 | None:intergenic | 25.0% |
| !! | TTTTGTGTATTTTCTTGCAA+AGG | + | chr4_1:85179783-85179802 | None:intergenic | 25.0% |
| !! | AGTCTTATCTATAATTGCAA+TGG | - | chr4_1:85179847-85179866 | Msa0580140:intron | 25.0% |
| ! | TAGTTGAAGTGAAAAGAAAA+AGG | - | chr4_1:85179882-85179901 | Msa0580140:intron | 25.0% |
| ! | AGTTGAAGTGAAAAGAAAAA+GGG | - | chr4_1:85179883-85179902 | Msa0580140:intron | 25.0% |
| ! | GCAATCCAAAAAAATGTTAT+TGG | + | chr4_1:85179953-85179972 | None:intergenic | 25.0% |
| ! | ACCAATTAAAATGAGATCTT+GGG | - | chr4_1:85180048-85180067 | Msa0580140:CDS | 25.0% |
| ! | TCAATAGTTAATAGTGTTAC+TGG | - | chr4_1:85180130-85180149 | Msa0580140:intron | 25.0% |
| !!! | TCTCTAAATGATAATGGTTA+AGG | + | chr4_1:85180192-85180211 | None:intergenic | 25.0% |
| ! | TTAACCATTATCATTTAGAG+AGG | - | chr4_1:85180191-85180210 | Msa0580140:intron | 25.0% |
| ! | AAAACCTCTCTAAATGATAA+TGG | + | chr4_1:85180198-85180217 | None:intergenic | 25.0% |
| !!! | ATCATTTAGAGAGGTTTTAT+TGG | - | chr4_1:85180200-85180219 | Msa0580140:intron | 25.0% |
| !! | ATTTTCTGCATTACTTGTTT+TGG | - | chr4_1:85180248-85180267 | Msa0580140:intron | 25.0% |
| !!! | TTTTCTGCATTACTTGTTTT+GGG | - | chr4_1:85180249-85180268 | Msa0580140:intron | 25.0% |
| ! | AAATTTCCATTCATCAGTAA+TGG | + | chr4_1:85180306-85180325 | None:intergenic | 25.0% |
| ! | GAAGATTTAAAGAAAGTGTG+AGG | + | chr4_1:85171630-85171649 | None:intergenic | 30.0% |
| ATTGAATTATGATCTTCGTC+GGG | + | chr4_1:85172053-85172072 | None:intergenic | 30.0% | |
| TTAAATTAAACAATCTGGGC+TGG | + | chr4_1:85172114-85172133 | None:intergenic | 30.0% | |
| ! | ACATTGTTAGCAGATTTTGA+TGG | + | chr4_1:85172277-85172296 | None:intergenic | 30.0% |
| ! | ATCTCTCTTTTTCTATGTGT+GGG | - | chr4_1:85172437-85172456 | Msa0580140:CDS | 30.0% |
| !! | CAAATACACACTTTGAGTTT+TGG | - | chr4_1:85172604-85172623 | Msa0580140:CDS | 30.0% |
| ATACGATTGCTTAATAGAGA+CGG | - | chr4_1:85172903-85172922 | Msa0580140:intron | 30.0% | |
| !!! | ACAGATATTTTTTCTTACCG+AGG | - | chr4_1:85173204-85173223 | Msa0580140:intron | 30.0% |
| ! | GATTCTGGTTATGACATTAT+GGG | + | chr4_1:85173752-85173771 | None:intergenic | 30.0% |
| ! | AGATTCTGGTTATGACATTA+TGG | + | chr4_1:85173753-85173772 | None:intergenic | 30.0% |
| !! | AAATTGACTTGTAAGTTGTG+AGG | - | chr4_1:85174211-85174230 | Msa0580140:intron | 30.0% |
| ! | TGTTCCAAAGCAAAATTTTC+AGG | - | chr4_1:85174434-85174453 | Msa0580140:intron | 30.0% |
| ! | ATCACCTGAAAATTTTGCTT+TGG | + | chr4_1:85174441-85174460 | None:intergenic | 30.0% |
| !! | AACTTTTGCTTTTGCATTCA+CGG | + | chr4_1:85174740-85174759 | None:intergenic | 30.0% |
| ATAACAAAGACAAACGAAAG+TGG | - | chr4_1:85174855-85174874 | Msa0580140:intron | 30.0% | |
| GTATAAGCGAAAAAGAAAGA+AGG | - | chr4_1:85174980-85174999 | Msa0580140:intron | 30.0% | |
| GCTTTCGAAGTTAAAAAACA+TGG | + | chr4_1:85175149-85175168 | None:intergenic | 30.0% | |
| AATTACTAGAGTAGGAAATC+TGG | + | chr4_1:85175236-85175255 | None:intergenic | 30.0% | |
| ACTTTGCTTTGATGTTATGA+TGG | + | chr4_1:85175332-85175351 | None:intergenic | 30.0% | |
| ! | TATTTGGTGATCTATAGTGA+TGG | - | chr4_1:85175451-85175470 | Msa0580140:intron | 30.0% |
| ! | ATTTGGTGATCTATAGTGAT+GGG | - | chr4_1:85175452-85175471 | Msa0580140:intron | 30.0% |
| AAAAGTCTCTTAGACCTATT+AGG | - | chr4_1:85175604-85175623 | Msa0580140:intron | 30.0% | |
| AATTCCCTAAAAACTCATGT+TGG | - | chr4_1:85175789-85175808 | Msa0580140:intron | 30.0% | |
| TAATCTTAGGTCAAAAGTTG+GGG | + | chr4_1:85175826-85175845 | None:intergenic | 30.0% | |
| TGACCTAAGATTATATAGTG+GGG | - | chr4_1:85175833-85175852 | Msa0580140:intron | 30.0% | |
| GGGGTGTATCTTTAATTAAT+GGG | - | chr4_1:85175853-85175872 | Msa0580140:intron | 30.0% | |
| GGGTGTATCTTTAATTAATG+GGG | - | chr4_1:85175854-85175873 | Msa0580140:intron | 30.0% | |
| AAAATACCTTGAAACCGAAA+GGG | + | chr4_1:85176380-85176399 | None:intergenic | 30.0% | |
| AAAAATACCTTGAAACCGAA+AGG | + | chr4_1:85176381-85176400 | None:intergenic | 30.0% | |
| ! | GATTAGGTTAAGAGATTTTG+TGG | - | chr4_1:85176423-85176442 | Msa0580140:intron | 30.0% |
| GATCACTTGATTGAAAATCA+AGG | + | chr4_1:85176593-85176612 | None:intergenic | 30.0% | |
| ! | ACCAATTCTTATTTGTCACT+TGG | - | chr4_1:85176699-85176718 | Msa0580140:intron | 30.0% |
| GGTAGAAATTGACATTTGAT+TGG | + | chr4_1:85176770-85176789 | None:intergenic | 30.0% | |
| !! | TTTATTGATTTGGAAGGACA+AGG | + | chr4_1:85176836-85176855 | None:intergenic | 30.0% |
| ! | TAGAGTACTACGAACATAAA+GGG | - | chr4_1:85176967-85176986 | Msa0580140:intron | 30.0% |
| ! | ATTTCACGACTGAACTTTTA+GGG | + | chr4_1:85177029-85177048 | None:intergenic | 30.0% |
| ! | TATTTCACGACTGAACTTTT+AGG | + | chr4_1:85177030-85177049 | None:intergenic | 30.0% |
| GTGAAATATAATAGTGAGTC+AGG | - | chr4_1:85177042-85177061 | Msa0580140:intron | 30.0% | |
| GTAACGTTAAAGCAAAAAGT+AGG | + | chr4_1:85177327-85177346 | None:intergenic | 30.0% | |
| ! | GTTAACGCAATCAAGATTTT+TGG | - | chr4_1:85177428-85177447 | Msa0580140:intron | 30.0% |
| GAATCAAACAACCCAAAATA+AGG | - | chr4_1:85177450-85177469 | Msa0580140:intron | 30.0% | |
| !! | AAAACATAACCCCTAGTTTT+AGG | - | chr4_1:85177496-85177515 | Msa0580140:intron | 30.0% |
| !! | TTTTGGGAAACCTAAAACTA+GGG | + | chr4_1:85177509-85177528 | None:intergenic | 30.0% |
| ATGATTTATGACATACCTCA+TGG | - | chr4_1:85177537-85177556 | Msa0580140:intron | 30.0% | |
| TGATTTATGACATACCTCAT+GGG | - | chr4_1:85177538-85177557 | Msa0580140:intron | 30.0% | |
| !!! | TTATTTTGGGCCTTTAAGTA+TGG | + | chr4_1:85177735-85177754 | None:intergenic | 30.0% |
| ! | GGATACCTCATTGTTTATTT+TGG | + | chr4_1:85177749-85177768 | None:intergenic | 30.0% |
| ATCAAGTACAAGTACTACTA+AGG | + | chr4_1:85177775-85177794 | None:intergenic | 30.0% | |
| !! | ATATGATCGCATTTTAGGAA+TGG | - | chr4_1:85177864-85177883 | Msa0580140:intron | 30.0% |
| ATGATGTGATATTCACTTGT+TGG | - | chr4_1:85177948-85177967 | Msa0580140:intron | 30.0% | |
| AAAAAAACAGTGGCCTAATA+AGG | - | chr4_1:85177973-85177992 | Msa0580140:intron | 30.0% | |
| TAGCAACATTGAACCTTATT+AGG | + | chr4_1:85177989-85178008 | None:intergenic | 30.0% | |
| ATTAATGTTTGTGGTAGTCT+GGG | - | chr4_1:85178088-85178107 | Msa0580140:intron | 30.0% | |
| ! | AAACTTGTACTAAGGGATTT+TGG | - | chr4_1:85178256-85178275 | Msa0580140:intron | 30.0% |
| !! | GCAAAAGCATTAATGTTGTA+TGG | - | chr4_1:85178380-85178399 | Msa0580140:intron | 30.0% |
| ! | AAAGCATTAATGTTGTATGG+TGG | - | chr4_1:85178383-85178402 | Msa0580140:intron | 30.0% |
| TTTGATGAGGATAATGTATC+TGG | - | chr4_1:85178473-85178492 | Msa0580140:intron | 30.0% | |
| ! | GTGTGGATTGAAGATAATAT+TGG | - | chr4_1:85178575-85178594 | Msa0580140:intron | 30.0% |
| AAGATAATATTGGGTGGAAA+TGG | - | chr4_1:85178585-85178604 | Msa0580140:intron | 30.0% | |
| AGATAATATTGGGTGGAAAT+GGG | - | chr4_1:85178586-85178605 | Msa0580140:intron | 30.0% | |
| TATAGGAATAAGATTCCTAC+TGG | - | chr4_1:85178674-85178693 | Msa0580140:intron | 30.0% | |
| !! | TCCTCTTACTACCATTTTTA+AGG | - | chr4_1:85178700-85178719 | Msa0580140:intron | 30.0% |
| ACCTTAAAAATGGTAGTAAG+AGG | + | chr4_1:85178704-85178723 | None:intergenic | 30.0% | |
| !!! | CAGTTCGGTTTTGAAAATAT+TGG | + | chr4_1:85178780-85178799 | None:intergenic | 30.0% |
| !! | TGTTGGTTTGATTAATGGTT+CGG | - | chr4_1:85178973-85178992 | Msa0580140:intron | 30.0% |
| AAGACTAATTAGAGAGAGTT+TGG | + | chr4_1:85179169-85179188 | None:intergenic | 30.0% | |
| CAATGTTAGAAAACCAAAAG+AGG | - | chr4_1:85179433-85179452 | Msa0580140:intron | 30.0% | |
| ATAACACATCTCCAAAGAAT+TGG | - | chr4_1:85179815-85179834 | Msa0580140:intron | 30.0% | |
| CTAATCCAATTCCAATTCTT+TGG | + | chr4_1:85179829-85179848 | None:intergenic | 30.0% | |
| CACCAATTAAAATGAGATCT+TGG | - | chr4_1:85180047-85180066 | Msa0580140:CDS | 30.0% | |
| !!! | ATTACTTGTTTTGGGCAATT+AGG | - | chr4_1:85180257-85180276 | Msa0580140:intron | 30.0% |
| AGGAACTTGAACAACAACAA+GGG | - | chr4_1:85171851-85171870 | Msa0580140:CDS | 35.0% | |
| TTGAGACATACCCAAAACAA+AGG | + | chr4_1:85171953-85171972 | None:intergenic | 35.0% | |
| !! | TTTATGTTTTTGTGCAGTGG+TGG | - | chr4_1:85172174-85172193 | Msa0580140:CDS | 35.0% |
| !! | GCAACTTGGTGTTATATCTA+AGG | - | chr4_1:85172233-85172252 | Msa0580140:CDS | 35.0% |
| ACTCAATAACTGCACTTATC+AGG | + | chr4_1:85172384-85172403 | None:intergenic | 35.0% | |
| TAAGAAGTAAGGTTCATACC+AGG | + | chr4_1:85172408-85172427 | None:intergenic | 35.0% | |
| ! | CATCTCTCTTTTTCTATGTG+TGG | - | chr4_1:85172436-85172455 | Msa0580140:CDS | 35.0% |
| ACTCAAAGTGTGTATTTGCA+AGG | + | chr4_1:85172602-85172621 | None:intergenic | 35.0% | |
| !!! | AGAGAGTTCTAGTTTTACAG+TGG | - | chr4_1:85173122-85173141 | Msa0580140:intron | 35.0% |
| !! | TGCGGGTTTTTCAAAGAAAA+AGG | - | chr4_1:85173715-85173734 | Msa0580140:intron | 35.0% |
| ! | CTTGAAATTGACTCAGATTC+TGG | + | chr4_1:85173767-85173786 | None:intergenic | 35.0% |
| ! | TAGTTTTCTCGAGAATACCT+AGG | - | chr4_1:85175074-85175093 | Msa0580140:intron | 35.0% |
| AAATCTGGACCATATAGCAA+TGG | + | chr4_1:85175221-85175240 | None:intergenic | 35.0% | |
| ATAAATTAGGTCGACCTACA+AGG | - | chr4_1:85175476-85175495 | Msa0580140:intron | 35.0% | |
| TAAATTAGGTCGACCTACAA+GGG | - | chr4_1:85175477-85175496 | Msa0580140:intron | 35.0% | |
| ! | GGTCTAAGAGACTTTTTGAA+TGG | + | chr4_1:85175600-85175619 | None:intergenic | 35.0% |
| GACCTAAGATTATATAGTGG+GGG | - | chr4_1:85175834-85175853 | Msa0580140:intron | 35.0% | |
| ! | GGGGGTGTATCTTTAATTAA+TGG | - | chr4_1:85175852-85175871 | Msa0580140:intron | 35.0% |
| ! | AGAGAATTTTGTAGTGAGGT+TGG | + | chr4_1:85176453-85176472 | None:intergenic | 35.0% |
| ! | AGTGAGAGAATTTTGTAGTG+AGG | + | chr4_1:85176457-85176476 | None:intergenic | 35.0% |
| GCCAAGTGACAAATAAGAAT+TGG | + | chr4_1:85176703-85176722 | None:intergenic | 35.0% | |
| ! | GTAGAGTACTACGAACATAA+AGG | - | chr4_1:85176966-85176985 | Msa0580140:intron | 35.0% |
| !!! | AAACTAGGGGTCCTTATTTT+GGG | + | chr4_1:85177464-85177483 | None:intergenic | 35.0% |
| !! | TAAACTAGGGGTCCTTATTT+TGG | + | chr4_1:85177465-85177484 | None:intergenic | 35.0% |
| TTTGGGAAACCTAAAACTAG+GGG | + | chr4_1:85177508-85177527 | None:intergenic | 35.0% | |
| !! | CTTTTGGGAAACCTAAAACT+AGG | + | chr4_1:85177510-85177529 | None:intergenic | 35.0% |
| AGGATTAACCACTTCACAAT+TGG | - | chr4_1:85177600-85177619 | Msa0580140:intron | 35.0% | |
| ATTAACCACTTCACAATTGG+AGG | - | chr4_1:85177603-85177622 | Msa0580140:intron | 35.0% | |
| !! | TGGAGGTTCTAGATTACAAA+TGG | - | chr4_1:85177620-85177639 | Msa0580140:intron | 35.0% |
| AAGGCCCAAAATAAACAATG+AGG | - | chr4_1:85177741-85177760 | Msa0580140:intron | 35.0% | |
| GTACAAGTACTACTAAGGAA+AGG | + | chr4_1:85177770-85177789 | None:intergenic | 35.0% | |
| ACGTCCACATCTTTAGATAA+AGG | + | chr4_1:85177838-85177857 | None:intergenic | 35.0% | |
| TAGGAATGGTACAAGACAAT+TGG | - | chr4_1:85177878-85177897 | Msa0580140:intron | 35.0% | |
| CTTGTTGGCAAAAAAAACAG+TGG | - | chr4_1:85177963-85177982 | Msa0580140:intron | 35.0% | |
| GGCTTTCACATTAATGTTTG+TGG | - | chr4_1:85178079-85178098 | Msa0580140:intron | 35.0% | |
| CATTAATGTTTGTGGTAGTC+TGG | - | chr4_1:85178087-85178106 | Msa0580140:intron | 35.0% | |
| ATGAGGATAATGTATCTGGA+AGG | - | chr4_1:85178477-85178496 | Msa0580140:intron | 35.0% | |
| ! | TTCATCTTTAGCTTAGCATG+TGG | - | chr4_1:85178527-85178546 | Msa0580140:intron | 35.0% |
| !!! | TTGCAGTTACTTTTGTTGTG+TGG | - | chr4_1:85178558-85178577 | Msa0580140:intron | 35.0% |
| GGATTGAAGATAATATTGGG+TGG | - | chr4_1:85178579-85178598 | Msa0580140:intron | 35.0% | |
| GATAATATTGGGTGGAAATG+GGG | - | chr4_1:85178587-85178606 | Msa0580140:intron | 35.0% | |
| ! | TGTTTCTATTCCTGTGTTCT+TGG | - | chr4_1:85178637-85178656 | Msa0580140:intron | 35.0% |
| !! | TGGCTGGTTCTACTAAATAT+AGG | - | chr4_1:85178657-85178676 | Msa0580140:intron | 35.0% |
| GAGGTGTGTTACCTTAAAAA+TGG | + | chr4_1:85178714-85178733 | None:intergenic | 35.0% | |
| CCAACTTATTATAGAGCATG+AGG | + | chr4_1:85178733-85178752 | None:intergenic | 35.0% | |
| CCTCATGCTCTATAATAAGT+TGG | - | chr4_1:85178730-85178749 | Msa0580140:intron | 35.0% | |
| ! | TTAAACCGGTTAGTTCAGTT+CGG | + | chr4_1:85178795-85178814 | None:intergenic | 35.0% |
| TTGGCATAATCACAATGTGT+CGG | + | chr4_1:85179150-85179169 | None:intergenic | 35.0% | |
| TTATTGGATTAAGAGTTCCG+CGG | + | chr4_1:85179193-85179212 | None:intergenic | 35.0% | |
| ! | GTTATTGAATGAGCAGGTTT+TGG | - | chr4_1:85179325-85179344 | Msa0580140:intron | 35.0% |
| GTTAGAAAACCAAAAGAGGA+AGG | - | chr4_1:85179437-85179456 | Msa0580140:intron | 35.0% | |
| AGAAACATCCAAAGCAACAA+AGG | - | chr4_1:85179460-85179479 | Msa0580140:intron | 35.0% | |
| ! | TTGAGTTTCCTTTGTTGCTT+TGG | + | chr4_1:85179471-85179490 | None:intergenic | 35.0% |
| ! | CGAAAATTGGGAGGATTTTT+AGG | + | chr4_1:85179586-85179605 | None:intergenic | 35.0% |
| !! | AAAATTGGTAATGAAGCTGG+TGG | + | chr4_1:85179707-85179726 | None:intergenic | 35.0% |
| !! | ATGAAGAGTACTGGGAAAAT+TGG | + | chr4_1:85179722-85179741 | None:intergenic | 35.0% |
| !! | GGATCATTATGAAGAGTACT+GGG | + | chr4_1:85179730-85179749 | None:intergenic | 35.0% |
| ! | AGGATCATTATGAAGAGTAC+TGG | + | chr4_1:85179731-85179750 | None:intergenic | 35.0% |
| ! | TGTGATCATAAATTGGTGCT+AGG | + | chr4_1:85179751-85179770 | None:intergenic | 35.0% |
| CATCTCCAAAGAATTGGAAT+TGG | - | chr4_1:85179821-85179840 | Msa0580140:intron | 35.0% | |
| AAAAGGGTAGCAACAAATCA+TGG | - | chr4_1:85179899-85179918 | Msa0580140:intron | 35.0% | |
| !! | GCTTTTCAGTACTTGTTTCT+TGG | - | chr4_1:85179971-85179990 | Msa0580140:intron | 35.0% |
| TTCAGCTGATCTATTCACTA+TGG | - | chr4_1:85179994-85180013 | Msa0580140:intron | 35.0% | |
| !! | GCCCAAGATCTCATTTTAAT+TGG | + | chr4_1:85180052-85180071 | None:intergenic | 35.0% |
| GTAATTCCTCTCATAAACCT+TGG | - | chr4_1:85180152-85180171 | Msa0580140:intron | 35.0% | |
| AGATAACCAAGGTTTATGAG+AGG | + | chr4_1:85180161-85180180 | None:intergenic | 35.0% | |
| TCTCATAAACCTTGGTTATC+TGG | - | chr4_1:85180160-85180179 | Msa0580140:intron | 35.0% | |
| GCAATTAGGTACAAGTATAG+AGG | - | chr4_1:85180271-85180290 | Msa0580140:five_prime_UTR | 35.0% | |
| AGGAAACCATTACTGATGAA+TGG | - | chr4_1:85180297-85180316 | Msa0580140:five_prime_UTR | 35.0% | |
| ! | AAAGAAAGTGTGAGGGAGAA+GGG | + | chr4_1:85171622-85171641 | None:intergenic | 40.0% |
| ! | TAAAGAAAGTGTGAGGGAGA+AGG | + | chr4_1:85171623-85171642 | None:intergenic | 40.0% |
| TCTGGAGAGAGAGATTTATG+AGG | + | chr4_1:85171675-85171694 | None:intergenic | 40.0% | |
| CAGGAACTTGAACAACAACA+AGG | - | chr4_1:85171850-85171869 | Msa0580140:CDS | 40.0% | |
| AACAACAACAAGGGACAAGA+TGG | - | chr4_1:85171860-85171879 | Msa0580140:CDS | 40.0% | |
| AGACATACCCAAAACAAAGG+AGG | + | chr4_1:85171950-85171969 | None:intergenic | 40.0% | |
| AATATCAACCGCGAGTACAA+CGG | - | chr4_1:85172018-85172037 | Msa0580140:CDS | 40.0% | |
| TCTAGCAAATGCAAGCAACT+TGG | - | chr4_1:85172219-85172238 | Msa0580140:CDS | 40.0% | |
| ! | GCTTTTCTTCTTGCTTTGCT+TGG | - | chr4_1:85172316-85172335 | Msa0580140:CDS | 40.0% |
| TTTCTTCTTGCTTTGCTTGG+TGG | - | chr4_1:85172319-85172338 | Msa0580140:CDS | 40.0% | |
| AAGTGCAGTTATTGAGTTCC+TGG | - | chr4_1:85172387-85172406 | Msa0580140:CDS | 40.0% | |
| GTTGCAAAACACAACTTGCA+AGG | - | chr4_1:85173786-85173805 | Msa0580140:intron | 40.0% | |
| CAAAACACAACTTGCAAGGT+GGG | - | chr4_1:85173790-85173809 | Msa0580140:intron | 40.0% | |
| AAAACACAACTTGCAAGGTG+GGG | - | chr4_1:85173791-85173810 | Msa0580140:intron | 40.0% | |
| !! | ATGTATTGGTTCTTCCCACT+TGG | - | chr4_1:85173941-85173960 | Msa0580140:intron | 40.0% |
| ATTCATGAGGAAGACCAAGT+GGG | + | chr4_1:85173958-85173977 | None:intergenic | 40.0% | |
| AATTCATGAGGAAGACCAAG+TGG | + | chr4_1:85173959-85173978 | None:intergenic | 40.0% | |
| ! | CTGGTATCTTATTAGTGGGT+GGG | + | chr4_1:85173995-85174014 | None:intergenic | 40.0% |
| GAGGCTGGTATCTTATTAGT+GGG | + | chr4_1:85173999-85174018 | None:intergenic | 40.0% | |
| ATTACCCACTATCAACTGTG+TGG | + | chr4_1:85174292-85174311 | None:intergenic | 40.0% | |
| TGCATTCACGGCCTAAAAAT+GGG | + | chr4_1:85174728-85174747 | None:intergenic | 40.0% | |
| TTGCATTCACGGCCTAAAAA+TGG | + | chr4_1:85174729-85174748 | None:intergenic | 40.0% | |
| ! | GAGACTTTTTGAATGGTCTG+TGG | + | chr4_1:85175593-85175612 | None:intergenic | 40.0% |
| CACCCCCACTATATAATCTT+AGG | + | chr4_1:85175839-85175858 | None:intergenic | 40.0% | |
| AGAGCTCATACAATGCATTC+CGG | - | chr4_1:85176259-85176278 | Msa0580140:intron | 40.0% | |
| !!! | CATCTGTGAATTTTGGTGTC+CGG | + | chr4_1:85176281-85176300 | None:intergenic | 40.0% |
| !!! | ACAGGAGCATCTGTGAATTT+TGG | + | chr4_1:85176288-85176307 | None:intergenic | 40.0% |
| TACTCGTAAACAGAAGTCGA+AGG | + | chr4_1:85176331-85176350 | None:intergenic | 40.0% | |
| CTACTCATTTCTGTCCCTTT+CGG | - | chr4_1:85176363-85176382 | Msa0580140:intron | 40.0% | |
| !! | TACGAGGTTTTGATCCCTTA+CGG | - | chr4_1:85176796-85176815 | Msa0580140:intron | 40.0% |
| !! | TCAGGGGTTGGTTACATAAA+GGG | + | chr4_1:85177005-85177024 | None:intergenic | 40.0% |
| !! | TTCAGGGGTTGGTTACATAA+AGG | + | chr4_1:85177006-85177025 | None:intergenic | 40.0% |
| !!! | ACTGAACTTTTAGGGTTCAG+GGG | + | chr4_1:85177021-85177040 | None:intergenic | 40.0% |
| !!! | GACTGAACTTTTAGGGTTCA+GGG | + | chr4_1:85177022-85177041 | None:intergenic | 40.0% |
| AGGCCTTACAAAACCTAACT+CGG | - | chr4_1:85177062-85177081 | Msa0580140:intron | 40.0% | |
| !! | AGACCGAGTTAGGTTTTGTA+AGG | + | chr4_1:85177068-85177087 | None:intergenic | 40.0% |
| GATTGAGAATAGACCGAGTT+AGG | + | chr4_1:85177078-85177097 | None:intergenic | 40.0% | |
| TAGGCATAGCCCATTCTATA+CGG | + | chr4_1:85177218-85177237 | None:intergenic | 40.0% | |
| TAGAACCTCCAATTGTGAAG+TGG | + | chr4_1:85177611-85177630 | None:intergenic | 40.0% | |
| GCAATGTCACATGAGAATCT+TGG | - | chr4_1:85178041-85178060 | Msa0580140:intron | 40.0% | |
| CTTCATGGCATACACTTGTT+GGG | + | chr4_1:85178352-85178371 | None:intergenic | 40.0% | |
| ACTTCATGGCATACACTTGT+TGG | + | chr4_1:85178353-85178372 | None:intergenic | 40.0% | |
| AGTGTATGCCATGAAGTTCA+TGG | - | chr4_1:85178356-85178375 | Msa0580140:intron | 40.0% | |
| ! | CTTTTGCACCATGAACTTCA+TGG | + | chr4_1:85178367-85178386 | None:intergenic | 40.0% |
| CTTGGAGTTGGAGGAATTAA+AGG | - | chr4_1:85178422-85178441 | Msa0580140:intron | 40.0% | |
| AAAGGATCATTAGCACCACA+TGG | - | chr4_1:85178440-85178459 | Msa0580140:intron | 40.0% | |
| CAAAACCGAACTGAACTAAC+CGG | - | chr4_1:85178787-85178806 | Msa0580140:intron | 40.0% | |
| TTTCCTTATCTCATTGCACG+AGG | - | chr4_1:85179106-85179125 | Msa0580140:intron | 40.0% | |
| !! | CTCTCTAATTAGTCTTTCCG+CGG | - | chr4_1:85179173-85179192 | Msa0580140:intron | 40.0% |
| CCTGCTCATTCAATAACCAT+AGG | + | chr4_1:85179322-85179341 | None:intergenic | 40.0% | |
| CCTATGGTTATTGAATGAGC+AGG | - | chr4_1:85179319-85179338 | Msa0580140:intron | 40.0% | |
| ! | GATGTTTCTCCTTCCTCTTT+TGG | + | chr4_1:85179449-85179468 | None:intergenic | 40.0% |
| GAATCTTAGTGTGTCTGTTG+GGG | + | chr4_1:85179495-85179514 | None:intergenic | 40.0% | |
| GGAATCTTAGTGTGTCTGTT+GGG | + | chr4_1:85179496-85179515 | None:intergenic | 40.0% | |
| AGGAATCTTAGTGTGTCTGT+TGG | + | chr4_1:85179497-85179516 | None:intergenic | 40.0% | |
| CAATTGTGCAGGCGAAAATT+GGG | + | chr4_1:85179598-85179617 | None:intergenic | 40.0% | |
| ACAATTGTGCAGGCGAAAAT+TGG | + | chr4_1:85179599-85179618 | None:intergenic | 40.0% | |
| ! | ACAGTTTAGGACAATTGTGC+AGG | + | chr4_1:85179609-85179628 | None:intergenic | 40.0% |
| GTTGAGCTAAGCAACAGTTT+AGG | + | chr4_1:85179622-85179641 | None:intergenic | 40.0% | |
| GAATTTCGTGTTCATTGTCG+CGG | + | chr4_1:85179669-85179688 | None:intergenic | 40.0% | |
| GCGACAATGAACACGAAATT+CGG | - | chr4_1:85179668-85179687 | Msa0580140:CDS | 40.0% | |
| !! | GGGAAAATTGGTAATGAAGC+TGG | + | chr4_1:85179710-85179729 | None:intergenic | 40.0% |
| !! | ATTCACTATGGCTGGTTTGT+TGG | - | chr4_1:85180006-85180025 | Msa0580140:intron | 40.0% |
| TTGGGCTACATCACTTACTT+GGG | - | chr4_1:85180066-85180085 | Msa0580140:CDS | 40.0% | |
| ATCACTTACTTGGGCTTCTT+TGG | - | chr4_1:85180075-85180094 | Msa0580140:CDS | 40.0% | |
| AGGTTTGAACCAGATAACCA+AGG | + | chr4_1:85180172-85180191 | None:intergenic | 40.0% | |
| AGGTACAAGTATAGAGGAAC+AGG | - | chr4_1:85180277-85180296 | Msa0580140:five_prime_UTR | 40.0% | |
| ! | TGTCTCTTTGGGTTTGGATC+TGG | + | chr4_1:85171693-85171712 | None:intergenic | 45.0% |
| ! | TCTCTCTGTCTCTTTGGGTT+TGG | + | chr4_1:85171699-85171718 | None:intergenic | 45.0% |
| AACCCAAAGAGACAGAGAGA+TGG | - | chr4_1:85171699-85171718 | Msa0580140:CDS | 45.0% | |
| CACCATCTCTCTGTCTCTTT+GGG | + | chr4_1:85171704-85171723 | None:intergenic | 45.0% | |
| TCACCATCTCTCTGTCTCTT+TGG | + | chr4_1:85171705-85171724 | None:intergenic | 45.0% | |
| CAACAAGGGACAAGATGGAT+TGG | - | chr4_1:85171865-85171884 | Msa0580140:CDS | 45.0% | |
| !! | GACAAGATGGATTGGCTATG+TGG | - | chr4_1:85171873-85171892 | Msa0580140:CDS | 45.0% |
| !!! | CTTGCAGCCTCCTTTGTTTT+GGG | - | chr4_1:85171940-85171959 | Msa0580140:CDS | 45.0% |
| ! | TAGAGTATCCGTTGTACTCG+CGG | + | chr4_1:85172029-85172048 | None:intergenic | 45.0% |
| !! | ATGTTTTTGTGCAGTGGTGG+AGG | - | chr4_1:85172177-85172196 | Msa0580140:CDS | 45.0% |
| GCAAAACACAACTTGCAAGG+TGG | - | chr4_1:85173789-85173808 | Msa0580140:intron | 45.0% | |
| GTTCGCTCATGCAATTCATG+AGG | + | chr4_1:85173971-85173990 | None:intergenic | 45.0% | |
| GCTGGTATCTTATTAGTGGG+TGG | + | chr4_1:85173996-85174015 | None:intergenic | 45.0% | |
| CGAGGCTGGTATCTTATTAG+TGG | + | chr4_1:85174000-85174019 | None:intergenic | 45.0% | |
| !! | TGTTGATTCCTGACTTAGCG+AGG | + | chr4_1:85174018-85174037 | None:intergenic | 45.0% |
| !! | AGACTCCACACAGTTGATAG+TGG | - | chr4_1:85174284-85174303 | Msa0580140:intron | 45.0% |
| !! | GACTCCACACAGTTGATAGT+GGG | - | chr4_1:85174285-85174304 | Msa0580140:intron | 45.0% |
| AGCCCGACATATCTTACTTG+CGG | - | chr4_1:85174324-85174343 | Msa0580140:intron | 45.0% | |
| TGGCCGCAAGTAAGATATGT+CGG | + | chr4_1:85174330-85174349 | None:intergenic | 45.0% | |
| GCATTCACGGCCTAAAAATG+GGG | + | chr4_1:85174727-85174746 | None:intergenic | 45.0% | |
| TGCAGTGGCACAGAAACATA+GGG | + | chr4_1:85175101-85175120 | None:intergenic | 45.0% | |
| ! | TTTCTAGTCCACTTGTGCAG+TGG | + | chr4_1:85175116-85175135 | None:intergenic | 45.0% |
| GTCTCTTAGACCTATTAGGC+CGG | - | chr4_1:85175608-85175627 | Msa0580140:intron | 45.0% | |
| CTTGAATATGCCGGCCTAAT+AGG | + | chr4_1:85175621-85175640 | None:intergenic | 45.0% | |
| CGTAAACAGAAGTCGAAGGA+GGG | + | chr4_1:85176327-85176346 | None:intergenic | 45.0% | |
| TCGTAAACAGAAGTCGAAGG+AGG | + | chr4_1:85176328-85176347 | None:intergenic | 45.0% | |
| TTCTGTCCCTTTCGGTTTCA+AGG | - | chr4_1:85176371-85176390 | Msa0580140:intron | 45.0% | |
| AATTTCTACCCCGAACTACG+AGG | - | chr4_1:85176780-85176799 | Msa0580140:intron | 45.0% | |
| GATCAAAACCTCGTAGTTCG+GGG | + | chr4_1:85176791-85176810 | None:intergenic | 45.0% | |
| GGATCAAAACCTCGTAGTTC+GGG | + | chr4_1:85176792-85176811 | None:intergenic | 45.0% | |
| GGGATCAAAACCTCGTAGTT+CGG | + | chr4_1:85176793-85176812 | None:intergenic | 45.0% | |
| TTGATCCCTTACGGATACGT+AGG | - | chr4_1:85176805-85176824 | Msa0580140:intron | 45.0% | |
| TCCTTCCTACGTATCCGTAA+GGG | + | chr4_1:85176813-85176832 | None:intergenic | 45.0% | |
| !! | GGGTTGGTTACATAAAGGGA+AGG | + | chr4_1:85177001-85177020 | None:intergenic | 45.0% |
| !!! | AACTTTTAGGGTTCAGGGGT+TGG | + | chr4_1:85177017-85177036 | None:intergenic | 45.0% |
| !!! | CGACTGAACTTTTAGGGTTC+AGG | + | chr4_1:85177023-85177042 | None:intergenic | 45.0% |
| AGCTAACCAGCCGTATAGAA+TGG | - | chr4_1:85177205-85177224 | Msa0580140:intron | 45.0% | |
| GCTAACCAGCCGTATAGAAT+GGG | - | chr4_1:85177206-85177225 | Msa0580140:intron | 45.0% | |
| !! | GTATAGAATGGGCTATGCCT+AGG | - | chr4_1:85177217-85177236 | Msa0580140:intron | 45.0% |
| !!! | AGGGATTTTGGAACATGTGC+AGG | - | chr4_1:85178268-85178287 | Msa0580140:intron | 45.0% |
| !!! | GGGATTTTGGAACATGTGCA+GGG | - | chr4_1:85178269-85178288 | Msa0580140:intron | 45.0% |
| ! | ACACTTGTTGGGTCACATGA+TGG | + | chr4_1:85178341-85178360 | None:intergenic | 45.0% |
| GGACTATACCTAGTTGCACT+TGG | - | chr4_1:85178404-85178423 | Msa0580140:intron | 45.0% | |
| TACCTAGTTGCACTTGGAGT+TGG | - | chr4_1:85178410-85178429 | Msa0580140:intron | 45.0% | |
| TCAAATTGCTCAGCACCATG+TGG | + | chr4_1:85178458-85178477 | None:intergenic | 45.0% | |
| ! | TGGTGCTGAGCAATTTGATG+AGG | - | chr4_1:85178460-85178479 | Msa0580140:intron | 45.0% |
| ! | ATTGGGTGGAAATGGGGTTT+TGG | - | chr4_1:85178593-85178612 | Msa0580140:intron | 45.0% |
| TCTATTCCTGTGTTCTTGGC+TGG | - | chr4_1:85178641-85178660 | Msa0580140:intron | 45.0% | |
| GTAGTAAGAGGACTTCCAGT+AGG | + | chr4_1:85178692-85178711 | None:intergenic | 45.0% | |
| TCACCTCGTGCAATGAGATA+AGG | + | chr4_1:85179112-85179131 | None:intergenic | 45.0% | |
| AAATTCCAGCAGTAGTGCTG+TGG | - | chr4_1:85179379-85179398 | Msa0580140:intron | 45.0% | |
| GCTGATCTATTCACTATGGC+TGG | - | chr4_1:85179998-85180017 | Msa0580140:intron | 45.0% | |
| CTTGGGCTACATCACTTACT+TGG | - | chr4_1:85180065-85180084 | Msa0580140:CDS | 45.0% | |
| !! | ACTTGGGCTTCTTTGGCTTT+AGG | - | chr4_1:85180082-85180101 | Msa0580140:CDS | 45.0% |
| TGGCTTATGTGTGTGCTTAC+TGG | - | chr4_1:85180220-85180239 | Msa0580140:intron | 45.0% | |
| !! | TAATTATATAATGAAATTTA+AGG | - | chr4_1:85173403-85173422 | Msa0580140:CDS | 5.0% |
| !!! | ATATATATCTTTTTTTTTTT+TGG | - | chr4_1:85173450-85173469 | Msa0580140:CDS | 5.0% |
| !! | TAGATTATTAAATTAAATAA+TGG | - | chr4_1:85174060-85174079 | Msa0580140:intron | 5.0% |
| !! | AAATTTGAATATAAATTTAT+AGG | + | chr4_1:85174357-85174376 | None:intergenic | 5.0% |
| !!! | TATATTTTATATAAATTATG+TGG | + | chr4_1:85174518-85174537 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTATATATAGAAT+CGG | + | chr4_1:85174582-85174601 | None:intergenic | 5.0% |
| !! | GATAAATTAAATATTTAATT+TGG | - | chr4_1:85175925-85175944 | Msa0580140:intron | 5.0% |
| !! | GATGGATTGGCTATGTGGAC+TGG | - | chr4_1:85171878-85171897 | Msa0580140:CDS | 50.0% |
| !! | GCTTGCAGCCTCCTTTGTTT+TGG | - | chr4_1:85171939-85171958 | Msa0580140:CDS | 50.0% |
| CAAGGTGGGGTTGCATCAAA+TGG | - | chr4_1:85173804-85173823 | Msa0580140:intron | 50.0% | |
| GGCCGCAAGTAAGATATGTC+GGG | + | chr4_1:85174329-85174348 | None:intergenic | 50.0% | |
| GCACAGAAACATAGGGTCCT+AGG | + | chr4_1:85175094-85175113 | None:intergenic | 50.0% | |
| GTGCAGTGGCACAGAAACAT+AGG | + | chr4_1:85175102-85175121 | None:intergenic | 50.0% | |
| ! | TTTCTGTGCCACTGCACAAG+TGG | - | chr4_1:85175105-85175124 | Msa0580140:intron | 50.0% |
| ! | GGAGAAGAGAGGAAAAGCAC+AGG | + | chr4_1:85176306-85176325 | None:intergenic | 50.0% |
| TCCCTTACGGATACGTAGGA+AGG | - | chr4_1:85176809-85176828 | Msa0580140:intron | 50.0% | |
| GTCCTTCCTACGTATCCGTA+AGG | + | chr4_1:85176814-85176833 | None:intergenic | 50.0% | |
| CATAGCCCATTCTATACGGC+TGG | + | chr4_1:85177214-85177233 | None:intergenic | 50.0% | |
| TCATGACATTCACGCCCATG+AGG | + | chr4_1:85177555-85177574 | None:intergenic | 50.0% | |
| CTTGTTGGGTCACATGATGG+TGG | + | chr4_1:85178338-85178357 | None:intergenic | 50.0% | |
| CTCCAACTCCAAGTGCAACT+AGG | + | chr4_1:85178415-85178434 | None:intergenic | 50.0% | |
| CTAGTTGCACTTGGAGTTGG+AGG | - | chr4_1:85178413-85178432 | Msa0580140:intron | 50.0% | |
| GTAGAACCAGCCAAGAACAC+AGG | + | chr4_1:85178650-85178669 | None:intergenic | 50.0% | |
| CTCATTGCACGAGGTGAGTT+TGG | - | chr4_1:85179115-85179134 | Msa0580140:intron | 50.0% | |
| GTTTACCACAGCACTACTGC+TGG | + | chr4_1:85179387-85179406 | None:intergenic | 50.0% | |
| TTGTGCAGGCGAAAATTGGG+AGG | + | chr4_1:85179595-85179614 | None:intergenic | 50.0% | |
| ! | GAAAGTGTGAGGGAGAAGGG+AGG | + | chr4_1:85171619-85171638 | None:intergenic | 55.0% |
| !! | GGATTGGCTATGTGGACTGG+AGG | - | chr4_1:85171881-85171900 | Msa0580140:CDS | 55.0% |
| GATACCAGCCTCGCTAAGTC+AGG | - | chr4_1:85174007-85174026 | Msa0580140:intron | 55.0% | |
| GATTCCTGACTTAGCGAGGC+TGG | + | chr4_1:85174014-85174033 | None:intergenic | 55.0% | |
| AAGTCTGGCTGTCGCAGACT+AGG | + | chr4_1:85175510-85175529 | None:intergenic | 55.0% | |
| AGTCGAAGGAGGGAGAAGAG+AGG | + | chr4_1:85176317-85176336 | None:intergenic | 55.0% | |
| ! | CGTTTTCGATCGCGCTGTTG+AGG | + | chr4_1:85179517-85179536 | None:intergenic | 55.0% |
| AGGAACAGACCTGCCCACAG+AGG | - | chr4_1:85171901-85171920 | Msa0580140:CDS | 60.0% | |
| GCCACCATGTCTGCCTCTGT+GGG | + | chr4_1:85171917-85171936 | None:intergenic | 60.0% | |
| TGCCACCATGTCTGCCTCTG+TGG | + | chr4_1:85171918-85171937 | None:intergenic | 60.0% | |
| GGTCGACCTACAAGGGCCTA+CGG | - | chr4_1:85175484-85175503 | Msa0580140:intron | 60.0% | |
| ACTAGGCCGTAGGCCCTTGT+AGG | + | chr4_1:85175493-85175512 | None:intergenic | 60.0% | |
| CCATGTCTGCCTCTGTGGGC+AGG | + | chr4_1:85171913-85171932 | None:intergenic | 65.0% | |
| CCTGCCCACAGAGGCAGACA+TGG | - | chr4_1:85171910-85171929 | Msa0580140:CDS | 65.0% | |
| GCCCACAGAGGCAGACATGG+TGG | - | chr4_1:85171913-85171932 | Msa0580140:CDS | 65.0% | |
| GCTGTCGCAGACTAGGCCGT+AGG | + | chr4_1:85175503-85175522 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 85171613 | 85180366 | 85171613 | ID=Msa0580140;Name=Msa0580140 |
| chr4_1 | mRNA | 85171613 | 85180366 | 85171613 | ID=Msa0580140-mRNA-1;Parent=Msa0580140;Name=Msa0580140-mRNA-1;_AED=0.04;_eAED=0.04;_QI=105|1|1|1|1|1|5|54|577 |
| chr4_1 | exon | 85171613 | 85172638 | 85171613 | ID=Msa0580140-mRNA-1:exon:31175;Parent=Msa0580140-mRNA-1 |
| chr4_1 | exon | 85173258 | 85173689 | 85173258 | ID=Msa0580140-mRNA-1:exon:31174;Parent=Msa0580140-mRNA-1 |
| chr4_1 | exon | 85179571 | 85179788 | 85179571 | ID=Msa0580140-mRNA-1:exon:31173;Parent=Msa0580140-mRNA-1 |
| chr4_1 | exon | 85180018 | 85180126 | 85180018 | ID=Msa0580140-mRNA-1:exon:31172;Parent=Msa0580140-mRNA-1 |
| chr4_1 | exon | 85180259 | 85180366 | 85180259 | ID=Msa0580140-mRNA-1:exon:31171;Parent=Msa0580140-mRNA-1 |
| chr4_1 | five_prime_UTR | 85180262 | 85180366 | 85180262 | ID=Msa0580140-mRNA-1:five_prime_utr;Parent=Msa0580140-mRNA-1 |
| chr4_1 | CDS | 85180259 | 85180261 | 85180259 | ID=Msa0580140-mRNA-1:cds;Parent=Msa0580140-mRNA-1 |
| chr4_1 | CDS | 85180018 | 85180126 | 85180018 | ID=Msa0580140-mRNA-1:cds;Parent=Msa0580140-mRNA-1 |
| chr4_1 | CDS | 85179571 | 85179788 | 85179571 | ID=Msa0580140-mRNA-1:cds;Parent=Msa0580140-mRNA-1 |
| chr4_1 | CDS | 85173258 | 85173689 | 85173258 | ID=Msa0580140-mRNA-1:cds;Parent=Msa0580140-mRNA-1 |
| chr4_1 | CDS | 85171667 | 85172638 | 85171667 | ID=Msa0580140-mRNA-1:cds;Parent=Msa0580140-mRNA-1 |
| chr4_1 | three_prime_UTR | 85171613 | 85171666 | 85171613 | ID=Msa0580140-mRNA-1:three_prime_utr;Parent=Msa0580140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
