Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736920 | XP_013454210.2 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 1.76e-62 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736920 | sp|P47926|RSI1_SOLLC | 80.435 | 92 | 15 | 2 | 6 | 96 | 7 | 96 | 2.35e-48 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736920 | A0A396HU88 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 8.43e-63 | 194 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006480 | Msa0736920 | 0.810999 | 8.717534e-51 | -8.615850e-47 |
| Msa0011440 | Msa0736920 | -0.807628 | 4.606988e-50 | -8.615850e-47 |
| Msa0015950 | Msa0736920 | 0.806764 | 7.020835e-50 | -8.615850e-47 |
| Msa0015960 | Msa0736920 | 0.802597 | 5.203021e-49 | -8.615850e-47 |
| Msa0016070 | Msa0736920 | 0.804415 | 2.183647e-49 | -8.615850e-47 |
| Msa0016080 | Msa0736920 | 0.817359 | 3.436134e-52 | -8.615850e-47 |
| Msa0025560 | Msa0736920 | 0.811547 | 6.628696e-51 | -8.615850e-47 |
| Msa0025570 | Msa0736920 | 0.818684 | 1.723852e-52 | -8.615850e-47 |
| Msa0028690 | Msa0736920 | 0.828015 | 1.137188e-54 | -8.615850e-47 |
| Msa0042950 | Msa0736920 | -0.802567 | 5.276386e-49 | -8.615850e-47 |
| Msa0047660 | Msa0736920 | -0.800846 | 1.189719e-48 | -8.615850e-47 |
| Msa0060410 | Msa0736920 | 0.832788 | 7.739837e-56 | -8.615850e-47 |
| Msa0060670 | Msa0736920 | 0.807167 | 5.769581e-50 | -8.615850e-47 |
| Msa0063940 | Msa0736920 | 0.812220 | 4.731436e-51 | -8.615850e-47 |
| Msa0072180 | Msa0736920 | 0.805246 | 1.464625e-49 | -8.615850e-47 |
| Msa0073110 | Msa0736920 | 0.815378 | 9.532722e-52 | -8.615850e-47 |
| Msa0095890 | Msa0736920 | -0.805657 | 1.200618e-49 | -8.615850e-47 |
| Msa0100540 | Msa0736920 | 0.803983 | 2.686333e-49 | -8.615850e-47 |
| Msa0101530 | Msa0736920 | 0.832736 | 7.971646e-56 | -8.615850e-47 |
| Msa0119240 | Msa0736920 | 0.810451 | 1.145368e-50 | -8.615850e-47 |
| Msa0603310 | Msa0736920 | 0.840148 | 1.035256e-57 | -8.615850e-47 |
| Msa0628200 | Msa0736920 | 0.816432 | 5.546105e-52 | -8.615850e-47 |
| Msa0637700 | Msa0736920 | 0.807443 | 5.042970e-50 | -8.615850e-47 |
| Msa0644330 | Msa0736920 | 0.807653 | 4.550493e-50 | -8.615850e-47 |
| Msa0644340 | Msa0736920 | 0.814327 | 1.629956e-51 | -8.615850e-47 |
| Msa0657710 | Msa0736920 | 0.850055 | 2.174255e-60 | -8.615850e-47 |
| Msa0657720 | Msa0736920 | 0.829445 | 5.127083e-55 | -8.615850e-47 |
| Msa0658150 | Msa0736920 | 0.800067 | 1.715128e-48 | -8.615850e-47 |
| Msa0661410 | Msa0736920 | 0.808867 | 2.508173e-50 | -8.615850e-47 |
| Msa0661420 | Msa0736920 | 0.802661 | 5.047402e-49 | -8.615850e-47 |
| Msa0675630 | Msa0736920 | 0.803271 | 3.774772e-49 | -8.615850e-47 |
| Msa0682110 | Msa0736920 | 0.842414 | 2.624358e-58 | -8.615850e-47 |
| Msa0682160 | Msa0736920 | 0.833233 | 5.997143e-56 | -8.615850e-47 |
| Msa0702790 | Msa0736920 | 0.825193 | 5.357186e-54 | -8.615850e-47 |
| Msa0702800 | Msa0736920 | 0.846207 | 2.511369e-59 | -8.615850e-47 |
| Msa0707330 | Msa0736920 | 0.806730 | 7.139308e-50 | -8.615850e-47 |
| Msa0712880 | Msa0736920 | 0.807243 | 5.558410e-50 | -8.615850e-47 |
| Msa0719750 | Msa0736920 | 0.810348 | 1.205486e-50 | -8.615850e-47 |
| Msa0731590 | Msa0736920 | 0.802444 | 5.593557e-49 | -8.615850e-47 |
| Msa0736920 | Msa0741040 | 0.809976 | 1.450083e-50 | -8.615850e-47 |
| Msa0736920 | Msa0742370 | -0.826708 | 2.338452e-54 | -8.615850e-47 |
| Msa0736920 | Msa0744640 | 0.826992 | 2.001088e-54 | -8.615850e-47 |
| Msa0736920 | Msa0758990 | 0.813208 | 2.875151e-51 | -8.615850e-47 |
| Msa0736920 | Msa0765060 | 0.811818 | 5.788991e-51 | -8.615850e-47 |
| Msa0736920 | Msa0765090 | 0.807364 | 5.239467e-50 | -8.615850e-47 |
| Msa0736920 | Msa0771790 | 0.801242 | 9.876512e-49 | -8.615850e-47 |
| Msa0736920 | Msa0773030 | 0.817450 | 3.277239e-52 | -8.615850e-47 |
| Msa0736920 | Msa0778570 | 0.995323 | 3.874523e-215 | -8.615850e-47 |
| Msa0736920 | Msa0795750 | 0.802295 | 6.003489e-49 | -8.615850e-47 |
| Msa0736920 | Msa0800120 | 0.839311 | 1.709963e-57 | -8.615850e-47 |
| Msa0736920 | Msa0800150 | 0.827468 | 1.539151e-54 | -8.615850e-47 |
| Msa0736920 | Msa0800180 | 0.837618 | 4.673604e-57 | -8.615850e-47 |
| Msa0736920 | Msa0802760 | 0.808279 | 3.348453e-50 | -8.615850e-47 |
| Msa0736920 | Msa0810330 | 0.830952 | 2.197331e-55 | -8.615850e-47 |
| Msa0736920 | Msa0812720 | 0.816751 | 4.706123e-52 | -8.615850e-47 |
| Msa0736920 | Msa0815940 | 0.994091 | 1.685824e-204 | -8.615850e-47 |
| Msa0736920 | Msa0823480 | -0.802834 | 4.647533e-49 | -8.615850e-47 |
| Msa0736920 | Msa0828950 | 0.833180 | 6.182745e-56 | -8.615850e-47 |
| Msa0736920 | Msa0828960 | 0.847368 | 1.209020e-59 | -8.615850e-47 |
| Msa0736920 | Msa0833200 | -0.810283 | 1.244712e-50 | -8.615850e-47 |
| Msa0736920 | Msa0838210 | 0.820576 | 6.375165e-53 | -8.615850e-47 |
| Msa0736920 | Msa0841730 | 0.826669 | 2.389915e-54 | -8.615850e-47 |
| Msa0736920 | Msa0850640 | 0.824264 | 8.869219e-54 | -8.615850e-47 |
| Msa0736920 | Msa0862480 | -0.822492 | 2.301468e-53 | -8.615850e-47 |
| Msa0736920 | Msa0867660 | -0.808196 | 3.487929e-50 | -8.615850e-47 |
| Msa0736920 | Msa0873910 | 0.815814 | 7.621781e-52 | -8.615850e-47 |
| Msa0736920 | Msa0882780 | 0.808100 | 3.655761e-50 | -8.615850e-47 |
| Msa0736920 | Msa0901270 | 0.819820 | 9.500355e-53 | -8.615850e-47 |
| Msa0736920 | Msa0901290 | 0.817859 | 2.649570e-52 | -8.615850e-47 |
| Msa0736920 | Msa0905570 | 0.837491 | 5.036655e-57 | -8.615850e-47 |
| Msa0736920 | Msa0906660 | 0.813704 | 2.237381e-51 | -8.615850e-47 |
| Msa0736920 | Msa0907880 | 0.819933 | 8.953899e-53 | -8.615850e-47 |
| Msa0736920 | Msa0908260 | -0.808915 | 2.448965e-50 | -8.615850e-47 |
| Msa0736920 | Msa0908270 | -0.805096 | 1.574556e-49 | -8.615850e-47 |
| Msa0736920 | Msa0908470 | -0.805472 | 1.312981e-49 | -8.615850e-47 |
| Msa0736920 | Msa0908500 | -0.800625 | 1.320347e-48 | -8.615850e-47 |
| Msa0736920 | Msa0908510 | -0.805331 | 1.405507e-49 | -8.615850e-47 |
| Msa0736920 | Msa0908630 | -0.806063 | 9.866221e-50 | -8.615850e-47 |
| Msa0736920 | Msa0908690 | -0.809310 | 2.016120e-50 | -8.615850e-47 |
| Msa0736920 | Msa0908700 | -0.805271 | 1.447106e-49 | -8.615850e-47 |
| Msa0736920 | Msa0909260 | 0.804382 | 2.219124e-49 | -8.615850e-47 |
| Msa0736920 | Msa0910170 | 0.812816 | 3.503937e-51 | -8.615850e-47 |
| Msa0736920 | Msa0924900 | -0.808217 | 3.451472e-50 | -8.615850e-47 |
| Msa0736920 | Msa0925940 | 0.801671 | 8.064510e-49 | -8.615850e-47 |
| Msa0736920 | Msa0964020 | 0.804230 | 2.386663e-49 | -8.615850e-47 |
| Msa0736920 | Msa0966580 | 0.800538 | 1.374888e-48 | -8.615850e-47 |
| Msa0736920 | Msa0972680 | 0.815049 | 1.127987e-51 | -8.615850e-47 |
| Msa0736920 | Msa0973080 | -0.812276 | 4.600008e-51 | -8.615850e-47 |
| Msa0736920 | Msa0974710 | 0.807510 | 4.879778e-50 | -8.615850e-47 |
| Msa0736920 | Msa0983600 | -0.811633 | 6.351376e-51 | -8.615850e-47 |
| Msa0736920 | Msa0983610 | -0.810658 | 1.033411e-50 | -8.615850e-47 |
| Msa0736920 | Msa1001120 | 0.838505 | 2.763781e-57 | -8.615850e-47 |
| Msa0736920 | Msa1015360 | 0.835700 | 1.440325e-56 | -8.615850e-47 |
| Msa0736920 | Msa1019420 | 0.842096 | 3.185130e-58 | -8.615850e-47 |
| Msa0736920 | Msa1029860 | 0.815977 | 7.009942e-52 | -8.615850e-47 |
| Msa0736920 | Msa1034950 | 0.800402 | 1.465430e-48 | -8.615850e-47 |
| Msa0736920 | Msa1035190 | 0.802365 | 5.806650e-49 | -8.615850e-47 |
| Msa0736920 | Msa1056890 | 0.803931 | 2.753896e-49 | -8.615850e-47 |
| Msa0736920 | Msa1075010 | 0.801477 | 8.839165e-49 | -8.615850e-47 |
| Msa0736920 | Msa1075090 | 0.802544 | 5.335578e-49 | -8.615850e-47 |
| Msa0736920 | Msa1080130 | 0.808041 | 3.762275e-50 | -8.615850e-47 |
| Msa0736920 | Msa1086760 | -0.803731 | 3.030411e-49 | -8.615850e-47 |
| Msa0736920 | Msa1086770 | -0.805972 | 1.030935e-49 | -8.615850e-47 |
| Msa0736920 | Msa1086940 | -0.807256 | 5.523919e-50 | -8.615850e-47 |
| Msa0736920 | Msa1087070 | -0.810414 | 1.166265e-50 | -8.615850e-47 |
| Msa0736920 | Msa1087090 | -0.809861 | 1.534570e-50 | -8.615850e-47 |
| Msa0736920 | Msa1089990 | 0.810651 | 1.036689e-50 | -8.615850e-47 |
| Msa0736920 | Msa1092310 | 0.860887 | 1.509090e-63 | -8.615850e-47 |
| Msa0736920 | Msa1111910 | 0.821387 | 4.148329e-53 | -8.615850e-47 |
| Msa0736920 | Msa1115980 | 0.808277 | 3.352641e-50 | -8.615850e-47 |
| Msa0736920 | Msa1116090 | 0.800511 | 1.392665e-48 | -8.615850e-47 |
| Msa0736920 | Msa1133750 | 0.828693 | 7.803194e-55 | -8.615850e-47 |
| Msa0736920 | Msa1136760 | 0.807065 | 6.063575e-50 | -8.615850e-47 |
| Msa0736920 | Msa1143260 | 0.808340 | 3.249886e-50 | -8.615850e-47 |
| Msa0736920 | Msa1154060 | 0.818725 | 1.687092e-52 | -8.615850e-47 |
| Msa0736920 | Msa1154320 | 0.865932 | 4.125313e-65 | -8.615850e-47 |
| Msa0736920 | Msa1167310 | 0.843495 | 1.352554e-58 | -8.615850e-47 |
| Msa0736920 | Msa1184680 | 0.854385 | 1.275192e-61 | -8.615850e-47 |
| Msa0736920 | Msa1185270 | 0.812462 | 4.189629e-51 | -8.615850e-47 |
| Msa0736920 | Msa1187480 | 0.813694 | 2.248369e-51 | -8.615850e-47 |
| Msa0736920 | Msa1193940 | 0.820517 | 6.578819e-53 | -8.615850e-47 |
| Msa0736920 | Msa1202470 | 0.806600 | 7.604161e-50 | -8.615850e-47 |
| Msa0736920 | Msa1202800 | 0.882570 | 9.323167e-71 | -8.615850e-47 |
| Msa0736920 | Msa1203650 | 0.828557 | 8.416133e-55 | -8.615850e-47 |
| Msa0736920 | Msa1211940 | 0.812020 | 5.230883e-51 | -8.615850e-47 |
| Msa0736920 | Msa1212080 | 0.805703 | 1.174441e-49 | -8.615850e-47 |
| Msa0736920 | Msa1212830 | 0.805272 | 1.446227e-49 | -8.615850e-47 |
| Msa0736920 | Msa1221270 | 0.803576 | 3.264080e-49 | -8.615850e-47 |
| Msa0736920 | Msa1238600 | 0.834461 | 2.957501e-56 | -8.615850e-47 |
| Msa0736920 | Msa1239210 | 0.810865 | 9.319447e-51 | -8.615850e-47 |
| Msa0736920 | Msa1248060 | 0.836758 | 7.756641e-57 | -8.615850e-47 |
| Msa0736920 | Msa1254910 | 0.825422 | 4.728165e-54 | -8.615850e-47 |
| Msa0736920 | Msa1255210 | 0.872584 | 2.842638e-67 | -8.615850e-47 |
| Msa0736920 | Msa1268360 | 0.844001 | 9.903828e-59 | -8.615850e-47 |
| Msa0736920 | Msa1268390 | 0.855023 | 8.331281e-62 | -8.615850e-47 |
| Msa0736920 | Msa1268420 | 0.837575 | 4.794090e-57 | -8.615850e-47 |
| Msa0736920 | Msa1269200 | 0.843341 | 1.487367e-58 | -8.615850e-47 |
| Msa0736920 | Msa1273320 | 0.807064 | 6.067199e-50 | -8.615850e-47 |
| Msa0736920 | Msa1283930 | 0.813992 | 1.932500e-51 | -8.615850e-47 |
| Msa0736920 | Msa1284020 | 0.810157 | 1.325585e-50 | -8.615850e-47 |
| Msa0736920 | Msa1289050 | 0.810097 | 1.365545e-50 | -8.615850e-47 |
| Msa0736920 | Msa1289090 | 0.817821 | 2.702401e-52 | -8.615850e-47 |
| Msa0736920 | Msa1295650 | 0.871869 | 4.919282e-67 | -8.615850e-47 |
| Msa0736920 | Msa1301280 | -0.813851 | 2.076155e-51 | -8.615850e-47 |
| Msa0736920 | Msa1322960 | 0.811519 | 6.721820e-51 | -8.615850e-47 |
| Msa0736920 | Msa1331570 | -0.810141 | 1.335864e-50 | -8.615850e-47 |
| Msa0736920 | Msa1336020 | 0.820985 | 5.135605e-53 | -8.615850e-47 |
| Msa0736920 | Msa1343600 | 0.998634 | 3.456673e-271 | -8.615850e-47 |
| Msa0736920 | Msa1354360 | -0.807967 | 3.902875e-50 | -8.615850e-47 |
| Msa0736920 | Msa1354370 | -0.801205 | 1.004752e-48 | -8.615850e-47 |
| Msa0736920 | Msa1354400 | -0.811178 | 7.973002e-51 | -8.615850e-47 |
| Msa0736920 | Msa1354520 | -0.811328 | 7.397725e-51 | -8.615850e-47 |
| Msa0736920 | Msa1354530 | -0.809472 | 1.860575e-50 | -8.615850e-47 |
| Msa0736920 | Msa1354650 | -0.812225 | 4.719472e-51 | -8.615850e-47 |
| Msa0736920 | Msa1354660 | -0.811698 | 6.146399e-51 | -8.615850e-47 |
| Msa0736920 | Msa1354780 | -0.807945 | 3.944038e-50 | -8.615850e-47 |
| Msa0736920 | Msa1354790 | -0.812818 | 3.500943e-51 | -8.615850e-47 |
| Msa0736920 | Msa1354960 | -0.814923 | 1.202971e-51 | -8.615850e-47 |
| Msa0736920 | Msa1365990 | -0.806533 | 7.854918e-50 | -8.615850e-47 |
| Msa0736920 | Msa1366020 | -0.809689 | 1.671486e-50 | -8.615850e-47 |
| Msa0736920 | Msa1366030 | -0.812342 | 4.449577e-51 | -8.615850e-47 |
| Msa0736920 | Msa1366060 | -0.811376 | 7.222813e-51 | -8.615850e-47 |
| Msa0736920 | Msa1368260 | -0.813064 | 3.092779e-51 | -8.615850e-47 |
| Msa0736920 | Msa1368390 | 0.801373 | 9.284548e-49 | -8.615850e-47 |
| Msa0736920 | Msa1384700 | 0.838975 | 2.089295e-57 | -8.615850e-47 |
| Msa0736920 | Msa1385360 | -0.806532 | 7.859727e-50 | -8.615850e-47 |
| Msa0736920 | Msa1385390 | -0.810746 | 9.890182e-51 | -8.615850e-47 |
| Msa0736920 | Msa1386830 | 0.801146 | 1.033288e-48 | -8.615850e-47 |
| Msa0736920 | Msa1391130 | -0.810796 | 9.645023e-51 | -8.615850e-47 |
| Msa0736920 | Msa1391140 | -0.812353 | 4.424282e-51 | -8.615850e-47 |
| Msa0736920 | Msa1391260 | -0.805601 | 1.233966e-49 | -8.615850e-47 |
| Msa0736920 | Msa1395080 | 0.800307 | 1.532852e-48 | -8.615850e-47 |
| Msa0736920 | Msa1404050 | 0.800358 | 1.496545e-48 | -8.615850e-47 |
| Msa0736920 | Msa1407810 | 0.812760 | 3.604735e-51 | -8.615850e-47 |
| Msa0736920 | Msa1408390 | 0.806301 | 8.792905e-50 | -8.615850e-47 |
| Msa0736920 | Msa1412330 | -0.808350 | 3.234500e-50 | -8.615850e-47 |
| Msa0736920 | Msa1422860 | 0.838234 | 3.245833e-57 | -8.615850e-47 |
| Msa0736920 | Msa1430950 | 0.818702 | 1.707296e-52 | -8.615850e-47 |
| Msa0736920 | Msa1433040 | 0.848301 | 6.686639e-60 | -8.615850e-47 |
| Msa0736920 | Msa1433360 | 0.829663 | 4.537498e-55 | -8.615850e-47 |
| Msa0736920 | Msa1437780 | 0.813966 | 1.958797e-51 | -8.615850e-47 |
| Msa0736920 | Msa1445530 | 0.820488 | 6.679166e-53 | -8.615850e-47 |
| Msa0736920 | Msa1455200 | 0.805936 | 1.049457e-49 | -8.615850e-47 |
| Msa0121300 | Msa0736920 | 0.822541 | 2.241683e-53 | -8.615850e-47 |
| Msa0143500 | Msa0736920 | 0.810552 | 1.089010e-50 | -8.615850e-47 |
| Msa0151510 | Msa0736920 | -0.800006 | 1.764440e-48 | -8.615850e-47 |
| Msa0151660 | Msa0736920 | 0.813692 | 2.250912e-51 | -8.615850e-47 |
| Msa0163690 | Msa0736920 | 0.806636 | 7.470551e-50 | -8.615850e-47 |
| Msa0166190 | Msa0736920 | 0.828620 | 8.126792e-55 | -8.615850e-47 |
| Msa0168750 | Msa0736920 | 0.804430 | 2.168053e-49 | -8.615850e-47 |
| Msa0185040 | Msa0736920 | 0.805081 | 1.585390e-49 | -8.615850e-47 |
| Msa0187540 | Msa0736920 | 0.806606 | 7.580917e-50 | -8.615850e-47 |
| Msa0189990 | Msa0736920 | 0.808811 | 2.578424e-50 | -8.615850e-47 |
| Msa0198990 | Msa0736920 | 0.803115 | 4.066151e-49 | -8.615850e-47 |
| Msa0210610 | Msa0736920 | 0.807144 | 5.835314e-50 | -8.615850e-47 |
| Msa0217060 | Msa0736920 | 0.823381 | 1.427961e-53 | -8.615850e-47 |
| Msa0218500 | Msa0736920 | 0.853811 | 1.866374e-61 | -8.615850e-47 |
| Msa0218610 | Msa0736920 | 0.821029 | 5.017734e-53 | -8.615850e-47 |
| Msa0224870 | Msa0736920 | 0.821243 | 4.479275e-53 | -8.615850e-47 |
| Msa0225790 | Msa0736920 | -0.801402 | 9.158539e-49 | -8.615850e-47 |
| Msa0234150 | Msa0736920 | 0.814356 | 1.606099e-51 | -8.615850e-47 |
| Msa0365210 | Msa0736920 | 0.815949 | 7.113298e-52 | -8.615850e-47 |
| Msa0375790 | Msa0736920 | 0.801052 | 1.079841e-48 | -8.615850e-47 |
| Msa0394500 | Msa0736920 | 0.810493 | 1.121595e-50 | -8.615850e-47 |
| Msa0405460 | Msa0736920 | -0.804260 | 2.352318e-49 | -8.615850e-47 |
| Msa0405470 | Msa0736920 | -0.801339 | 9.434659e-49 | -8.615850e-47 |
| Msa0405550 | Msa0736920 | -0.804017 | 2.642944e-49 | -8.615850e-47 |
| Msa0428270 | Msa0736920 | -0.806221 | 9.141155e-50 | -8.615850e-47 |
| Msa0449500 | Msa0736920 | 0.806673 | 7.338805e-50 | -8.615850e-47 |
| Msa0480900 | Msa0736920 | -0.806210 | 9.185939e-50 | -8.615850e-47 |
| Msa0481630 | Msa0736920 | 0.804074 | 2.572162e-49 | -8.615850e-47 |
| Msa0241750 | Msa0736920 | 0.813043 | 3.125883e-51 | -8.615850e-47 |
| Msa0256920 | Msa0736920 | 0.862024 | 6.791624e-64 | -8.615850e-47 |
| Msa0257760 | Msa0736920 | 0.810213 | 1.289004e-50 | -8.615850e-47 |
| Msa0258260 | Msa0736920 | 0.828847 | 7.158201e-55 | -8.615850e-47 |
| Msa0269170 | Msa0736920 | -0.816344 | 5.803922e-52 | -8.615850e-47 |
| Msa0282960 | Msa0736920 | 0.845695 | 3.459442e-59 | -8.615850e-47 |
| Msa0286360 | Msa0736920 | 0.807389 | 5.177009e-50 | -8.615850e-47 |
| Msa0287480 | Msa0736920 | 0.818391 | 2.008407e-52 | -8.615850e-47 |
| Msa0297340 | Msa0736920 | 0.826818 | 2.201758e-54 | -8.615850e-47 |
| Msa0298000 | Msa0736920 | 0.804823 | 1.795476e-49 | -8.615850e-47 |
| Msa0307740 | Msa0736920 | 0.827626 | 1.410043e-54 | -8.615850e-47 |
| Msa0345050 | Msa0736920 | 0.817958 | 2.517145e-52 | -8.615850e-47 |
| Msa0357310 | Msa0736920 | 0.818506 | 1.891892e-52 | -8.615850e-47 |
| Msa0483970 | Msa0736920 | -0.802243 | 6.152282e-49 | -8.615850e-47 |
| Msa0492330 | Msa0736920 | -0.802602 | 5.188743e-49 | -8.615850e-47 |
| Msa0501080 | Msa0736920 | 0.817285 | 3.569103e-52 | -8.615850e-47 |
| Msa0512630 | Msa0736920 | 0.805656 | 1.201349e-49 | -8.615850e-47 |
| Msa0531050 | Msa0736920 | 0.849622 | 2.872370e-60 | -8.615850e-47 |
| Msa0546590 | Msa0736920 | 0.802379 | 5.768047e-49 | -8.615850e-47 |
| Msa0548420 | Msa0736920 | 0.821000 | 5.094205e-53 | -8.615850e-47 |
| Msa0566280 | Msa0736920 | 0.864991 | 8.160763e-65 | -8.615850e-47 |
| Msa0567330 | Msa0736920 | 0.819266 | 1.271359e-52 | -8.615850e-47 |
| Msa0567570 | Msa0736920 | 0.801876 | 7.322671e-49 | -8.615850e-47 |
| Msa0576320 | Msa0736920 | 0.810315 | 1.225391e-50 | -8.615850e-47 |
| Msa0579220 | Msa0736920 | 0.803619 | 3.197195e-49 | -8.615850e-47 |
| Msa0580140 | Msa0736920 | 0.814197 | 1.742049e-51 | -8.615850e-47 |
| Msa0580890 | Msa0736920 | -0.801297 | 9.621331e-49 | -8.615850e-47 |
| Msa0588040 | Msa0736920 | 0.836053 | 1.172191e-56 | -8.615850e-47 |
| Msa0590620 | Msa0736920 | -0.825411 | 4.757478e-54 | -8.615850e-47 |
| Msa0596840 | Msa0736920 | 0.808325 | 3.273392e-50 | -8.615850e-47 |
| Msa0597180 | Msa0736920 | 0.806542 | 7.819522e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736920 | MtrunA17_Chr5g0434631 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 1.62e-66 | 194 |
| Msa0736920 | MtrunA17_Chr7g0256821 | 73.134 | 67 | 18 | 0 | 30 | 96 | 54 | 120 | 7.90e-33 | 110 |
| Msa0736920 | MtrunA17_Chr5g0415001 | 53.333 | 90 | 39 | 2 | 9 | 96 | 4 | 92 | 1.33e-31 | 106 |
| Msa0736920 | MtrunA17_Chr6g0453241 | 52.577 | 97 | 37 | 1 | 9 | 96 | 11 | 107 | 3.04e-31 | 105 |
| Msa0736920 | MtrunA17_Chr7g0217311 | 51.042 | 96 | 38 | 1 | 10 | 96 | 14 | 109 | 4.08e-30 | 103 |
| Msa0736920 | MtrunA17_Chr3g0092361 | 52.688 | 93 | 40 | 1 | 8 | 96 | 11 | 103 | 1.28e-29 | 101 |
| Msa0736920 | MtrunA17_Chr5g0446671 | 73.333 | 60 | 16 | 0 | 37 | 96 | 6 | 65 | 3.63e-29 | 99.4 |
| Msa0736920 | MtrunA17_Chr3g0078781 | 71.667 | 60 | 17 | 0 | 37 | 96 | 6 | 65 | 8.73e-29 | 98.6 |
| Msa0736920 | MtrunA17_Chr5g0415091 | 61.667 | 60 | 23 | 0 | 37 | 96 | 29 | 88 | 2.22e-23 | 85.5 |
| Msa0736920 | MtrunA17_Chr5g0415111 | 48.276 | 87 | 38 | 1 | 10 | 96 | 4 | 83 | 9.83e-22 | 81.3 |
| Msa0736920 | MtrunA17_Chr5g0415051 | 56.667 | 60 | 26 | 0 | 37 | 96 | 12 | 71 | 3.16e-19 | 74.3 |
| Msa0736920 | MtrunA17_Chr1g0200531 | 42.105 | 95 | 51 | 1 | 6 | 96 | 6 | 100 | 2.21e-18 | 73.2 |
| Msa0736920 | MtrunA17_Chr1g0156601 | 40.816 | 98 | 49 | 2 | 8 | 96 | 4 | 101 | 8.53e-16 | 66.6 |
| Msa0736920 | MtrunA17_Chr1g0156621 | 49.315 | 73 | 36 | 1 | 25 | 96 | 28 | 100 | 1.48e-15 | 65.9 |
| Msa0736920 | MtrunA17_Chr8g0364311 | 44.872 | 78 | 42 | 1 | 20 | 96 | 35 | 112 | 7.94e-15 | 64.3 |
| Msa0736920 | MtrunA17_Chr3g0134511 | 50.847 | 59 | 29 | 0 | 38 | 96 | 27 | 85 | 1.33e-14 | 63.2 |
| Msa0736920 | MtrunA17_Chr1g0207611 | 46.667 | 60 | 32 | 0 | 37 | 96 | 31 | 90 | 5.97e-14 | 61.6 |
| Msa0736920 | MtrunA17_Chr3g0142671 | 39.362 | 94 | 52 | 2 | 8 | 96 | 10 | 103 | 1.12e-13 | 61.2 |
| Msa0736920 | MtrunA17_Chr4g0013021 | 43.939 | 66 | 36 | 1 | 8 | 72 | 3 | 68 | 1.89e-12 | 57.4 |
| Msa0736920 | MtrunA17_Chr1g0152851 | 41.379 | 87 | 51 | 0 | 10 | 96 | 5 | 91 | 1.39e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736920 | AT1G74670.1 | 58.696 | 92 | 34 | 1 | 9 | 96 | 10 | 101 | 5.65e-34 | 113 |
| Msa0736920 | AT3G02885.1 | 71.233 | 73 | 21 | 0 | 24 | 96 | 25 | 97 | 5.59e-29 | 100 |
| Msa0736920 | AT5G15230.1 | 51.546 | 97 | 38 | 2 | 9 | 96 | 10 | 106 | 6.59e-27 | 95.5 |
| Msa0736920 | AT2G30810.1 | 52.000 | 100 | 36 | 1 | 9 | 96 | 7 | 106 | 2.70e-26 | 94.0 |
| Msa0736920 | AT3G10185.1 | 64.000 | 75 | 27 | 0 | 22 | 96 | 48 | 122 | 6.93e-25 | 90.9 |
| Msa0736920 | AT5G15230.2 | 54.217 | 83 | 35 | 1 | 17 | 96 | 1 | 83 | 7.57e-25 | 89.4 |
| Msa0736920 | AT2G39540.1 | 37.931 | 87 | 47 | 1 | 10 | 96 | 8 | 87 | 8.84e-16 | 66.6 |
| Msa0736920 | AT1G10588.1 | 40.909 | 88 | 45 | 2 | 10 | 96 | 9 | 90 | 1.53e-14 | 63.5 |
| Msa0736920 | AT1G22690.1 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0736920 | AT1G22690.2 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0736920 | AT1G22690.3 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0736920 | AT1G10588.2 | 39.773 | 88 | 45 | 2 | 10 | 96 | 9 | 89 | 5.50e-14 | 62.0 |
| Msa0736920 | AT4G09600.1 | 50.000 | 60 | 30 | 0 | 37 | 96 | 40 | 99 | 6.65e-14 | 62.0 |
| Msa0736920 | AT5G59845.1 | 36.364 | 88 | 49 | 2 | 10 | 96 | 8 | 89 | 7.62e-13 | 59.3 |
| Msa0736920 | AT2G18420.1 | 50.000 | 60 | 30 | 0 | 37 | 96 | 35 | 94 | 9.69e-13 | 58.9 |
| Msa0736920 | AT2G18420.2 | 50.000 | 60 | 30 | 0 | 37 | 96 | 11 | 70 | 1.11e-12 | 58.2 |
| Msa0736920 | AT5G14920.1 | 54.098 | 61 | 27 | 1 | 37 | 96 | 215 | 275 | 6.72e-12 | 59.7 |
| Msa0736920 | AT2G14900.1 | 34.118 | 85 | 45 | 1 | 23 | 96 | 24 | 108 | 2.40e-11 | 55.8 |
Find 37 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGGCATTCTTAAATTT+TGG | 0.170383 | 5_1:-53588598 | Msa0736920:three_prime_UTR |
| TGAGTATATGATATTATATT+TGG | 0.217941 | 5_1:+53588387 | None:intergenic |
| GGTCATCTCTTTGCTTCTTT+TGG | 0.218438 | 5_1:-53589792 | Msa0736920:CDS |
| CTTTCAACCTTCATATATTA+TGG | 0.238802 | 5_1:+53588615 | None:intergenic |
| TTAAGTGCTTAAGGGCATTT+TGG | 0.257598 | 5_1:+53588787 | None:intergenic |
| GTGTTATTTGAATATCATAT+TGG | 0.285158 | 5_1:-53588415 | Msa0736920:three_prime_UTR |
| TGTTATTTGAATATCATATT+GGG | 0.286165 | 5_1:-53588414 | Msa0736920:three_prime_UTR |
| TGTGTTCCTCCTGGTGTATA+TGG | 0.309163 | 5_1:-53588862 | Msa0736920:CDS |
| TTGAAGAAATTAAGTGCTTA+AGG | 0.326452 | 5_1:+53588778 | None:intergenic |
| GTGATCCTTGAACAGGCTTA+TGG | 0.330002 | 5_1:-53589601 | Msa0736920:intron |
| TGAAGAAATTAAGTGCTTAA+GGG | 0.385678 | 5_1:+53588779 | None:intergenic |
| TCATGCCTTTGTGTTCCTCC+TGG | 0.416024 | 5_1:-53588871 | Msa0736920:CDS |
| ACTCACCTTTCATACAATAT+AGG | 0.416602 | 5_1:+53588686 | None:intergenic |
| TTTGTCCTTGCTACAACAGC+TGG | 0.443536 | 5_1:-53588828 | Msa0736920:CDS |
| CTTCATATATTATGGTCAAA+AGG | 0.477709 | 5_1:+53588623 | None:intergenic |
| TCATACCTATATTGTATGAA+AGG | 0.479328 | 5_1:-53588691 | Msa0736920:three_prime_UTR |
| CATGGTGAGTGTCATTGAAA+AGG | 0.482399 | 5_1:+53588657 | None:intergenic |
| TGCTGCCATTGTTGTGAAAG+TGG | 0.523273 | 5_1:+53589838 | None:intergenic |
| CATAATATATGAAGGTTGAA+AGG | 0.525325 | 5_1:-53588614 | Msa0736920:three_prime_UTR |
| TTGCAATGGCTCCATCTTGG+TGG | 0.538056 | 5_1:-53589813 | Msa0736920:CDS |
| CAAAAGGACAAGATCATACA+TGG | 0.556119 | 5_1:+53588639 | None:intergenic |
| CAAAGAGATGACCACCAAGA+TGG | 0.560846 | 5_1:+53589802 | None:intergenic |
| CGTGCAAAACTTCGTCCTCA+AGG | 0.561656 | 5_1:-53589577 | Msa0736920:intron |
| ACGTTGCAATGGCTCCATCT+TGG | 0.582831 | 5_1:-53589816 | Msa0736920:CDS |
| GTCTTCCAGCTGTTGTAGCA+AGG | 0.586689 | 5_1:+53588823 | None:intergenic |
| TACATTCTCTAATGTAGCTG+AGG | 0.595669 | 5_1:-53589768 | Msa0736920:intron |
| GTTATTTGAATATCATATTG+GGG | 0.598241 | 5_1:-53588413 | Msa0736920:three_prime_UTR |
| TGCTTGTTGCCATATACACC+AGG | 0.601222 | 5_1:+53588853 | None:intergenic |
| ACAATGGCAGCACGTTGCAA+TGG | 0.611244 | 5_1:-53589827 | Msa0736920:CDS |
| AAGTTCCACTTTCACAACAA+TGG | 0.613001 | 5_1:-53589843 | Msa0736920:exon |
| CTACAACAGCTGGAAGACAC+AGG | 0.616939 | 5_1:-53588818 | Msa0736920:CDS |
| GAGCAACGATATGTACACCT+TGG | 0.623615 | 5_1:+53588946 | None:intergenic |
| AACAGCTGGAAGACACAGGA+AGG | 0.640099 | 5_1:-53588814 | Msa0736920:CDS |
| GTACTCTTGCAGTACTACAA+AGG | 0.645401 | 5_1:+53588464 | None:intergenic |
| ATGAAACAGATTGTAAACCA+AGG | 0.669189 | 5_1:-53588963 | Msa0736920:intron |
| TTGTTGCCATATACACCAGG+AGG | 0.729916 | 5_1:+53588856 | None:intergenic |
| ATACACCAGGAGGAACACAA+AGG | 0.753714 | 5_1:+53588866 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATAACTTGTTTAAAAAT+TGG | - | chr5_1:53588960-53588979 | Msa0736920:intron | 15.0% |
| !! | CCAAATTTGAAAAATAAATA+AGG | + | chr5_1:53589562-53589581 | None:intergenic | 15.0% |
| !!! | CCTTATTTATTTTTCAAATT+TGG | - | chr5_1:53589559-53589578 | Msa0736920:intron | 15.0% |
| !!! | ACACAATAATTTTTTTTTGA+GGG | + | chr5_1:53589740-53589759 | None:intergenic | 15.0% |
| !!! | TACACAATAATTTTTTTTTG+AGG | + | chr5_1:53589741-53589760 | None:intergenic | 15.0% |
| !!! | TGTTATTTGAATATCATATT+GGG | - | chr5_1:53589874-53589893 | Msa0736920:five_prime_UTR | 15.0% |
| !! | TGAGTATATGATATTATATT+TGG | + | chr5_1:53589904-53589923 | None:intergenic | 15.0% |
| !!! | AGTATAACTTGTTTAAAAAT+TGG | - | chr5_1:53588960-53588979 | Msa0736920:intron | 15.0% |
| !! | CCAAATTTGAAAAATAAATA+AGG | + | chr5_1:53589562-53589581 | None:intergenic | 15.0% |
| !!! | CCTTATTTATTTTTCAAATT+TGG | - | chr5_1:53589559-53589578 | Msa0736920:intron | 15.0% |
| !!! | ACACAATAATTTTTTTTTGA+GGG | + | chr5_1:53589740-53589759 | None:intergenic | 15.0% |
| !!! | TACACAATAATTTTTTTTTG+AGG | + | chr5_1:53589741-53589760 | None:intergenic | 15.0% |
| !!! | TGTTATTTGAATATCATATT+GGG | - | chr5_1:53589874-53589893 | Msa0736920:five_prime_UTR | 15.0% |
| !! | TGAGTATATGATATTATATT+TGG | + | chr5_1:53589904-53589923 | None:intergenic | 15.0% |
| !! | AAAACCATTTACTATATGAT+TGG | - | chr5_1:53588566-53588585 | Msa0736920:three_prime_UTR | 20.0% |
| !! | GTTCTAATATTTCAAAACTT+TGG | - | chr5_1:53588657-53588676 | Msa0736920:three_prime_UTR | 20.0% |
| !!! | TCCTCCATTAAAATAAATTT+TGG | - | chr5_1:53588836-53588855 | Msa0736920:CDS | 20.0% |
| !!! | ACTGCCAAAATTTATTTTAA+TGG | + | chr5_1:53588843-53588862 | None:intergenic | 20.0% |
| !!! | TAAATTTTGGCAGTTTTATA+AGG | - | chr5_1:53588849-53588868 | Msa0736920:CDS | 20.0% |
| !!! | TTTTATAAGGAATTTTTCCT+TGG | - | chr5_1:53588862-53588881 | Msa0736920:CDS | 20.0% |
| !!! | CACAATAATTTTTTTTTGAG+GGG | + | chr5_1:53589739-53589758 | None:intergenic | 20.0% |
| !! | AAAAAAATTATTGTGTACCT+TGG | - | chr5_1:53589744-53589763 | Msa0736920:intron | 20.0% |
| !!! | GTGTTATTTGAATATCATAT+TGG | - | chr5_1:53589873-53589892 | Msa0736920:five_prime_UTR | 20.0% |
| !! | GTTATTTGAATATCATATTG+GGG | - | chr5_1:53589875-53589894 | Msa0736920:five_prime_UTR | 20.0% |
| !! | AAAACCATTTACTATATGAT+TGG | - | chr5_1:53588566-53588585 | Msa0736920:three_prime_UTR | 20.0% |
| !! | GTTCTAATATTTCAAAACTT+TGG | - | chr5_1:53588657-53588676 | Msa0736920:three_prime_UTR | 20.0% |
| !!! | TCCTCCATTAAAATAAATTT+TGG | - | chr5_1:53588836-53588855 | Msa0736920:CDS | 20.0% |
| !!! | ACTGCCAAAATTTATTTTAA+TGG | + | chr5_1:53588843-53588862 | None:intergenic | 20.0% |
| !!! | TAAATTTTGGCAGTTTTATA+AGG | - | chr5_1:53588849-53588868 | Msa0736920:CDS | 20.0% |
| !!! | TTTTATAAGGAATTTTTCCT+TGG | - | chr5_1:53588862-53588881 | Msa0736920:CDS | 20.0% |
| !!! | CACAATAATTTTTTTTTGAG+GGG | + | chr5_1:53589739-53589758 | None:intergenic | 20.0% |
| !! | AAAAAAATTATTGTGTACCT+TGG | - | chr5_1:53589744-53589763 | Msa0736920:intron | 20.0% |
| !!! | GTGTTATTTGAATATCATAT+TGG | - | chr5_1:53589873-53589892 | Msa0736920:five_prime_UTR | 20.0% |
| !! | GTTATTTGAATATCATATTG+GGG | - | chr5_1:53589875-53589894 | Msa0736920:five_prime_UTR | 20.0% |
| ! | TGATCCAATCATATAGTAAA+TGG | + | chr5_1:53588573-53588592 | None:intergenic | 25.0% |
| ! | AATTGCATATATATACCTTG+AGG | + | chr5_1:53588729-53588748 | None:intergenic | 25.0% |
| !! | TTGTGTCTATAAGCAAATTT+TGG | - | chr5_1:53588770-53588789 | Msa0736920:three_prime_UTR | 25.0% |
| !! | TGTGTCTATAAGCAAATTTT+GGG | - | chr5_1:53588771-53588790 | Msa0736920:three_prime_UTR | 25.0% |
| !!! | GCCAAAATTTATTTTAATGG+AGG | + | chr5_1:53588840-53588859 | None:intergenic | 25.0% |
| ! | TAAATTATTAATGTTGAGCG+AGG | + | chr5_1:53588902-53588921 | None:intergenic | 25.0% |
| ! | TGTATAAGCAACCTAAAATT+TGG | - | chr5_1:53589074-53589093 | Msa0736920:intron | 25.0% |
| ! | GTATAAGCAACCTAAAATTT+GGG | - | chr5_1:53589075-53589094 | Msa0736920:intron | 25.0% |
| ! | TGAAGAAATTAAGTGCTTAA+GGG | + | chr5_1:53589512-53589531 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTAAGTGCTTA+AGG | + | chr5_1:53589513-53589532 | None:intergenic | 25.0% |
| ! | TCATACCTATATTGTATGAA+AGG | - | chr5_1:53589597-53589616 | Msa0736920:intron | 25.0% |
| ! | CTTCATATATTATGGTCAAA+AGG | + | chr5_1:53589668-53589687 | None:intergenic | 25.0% |
| !! | CTTTTGACCATAATATATGA+AGG | - | chr5_1:53589666-53589685 | Msa0736920:intron | 25.0% |
| ! | CTTTCAACCTTCATATATTA+TGG | + | chr5_1:53589676-53589695 | None:intergenic | 25.0% |
| ! | CATAATATATGAAGGTTGAA+AGG | - | chr5_1:53589674-53589693 | Msa0736920:intron | 25.0% |
| !!! | TGAAAGGCATTCTTAAATTT+TGG | - | chr5_1:53589690-53589709 | Msa0736920:intron | 25.0% |
| ! | AACATTGAAAAACAAAACCA+AGG | + | chr5_1:53589764-53589783 | None:intergenic | 25.0% |
| ! | TGATCCAATCATATAGTAAA+TGG | + | chr5_1:53588573-53588592 | None:intergenic | 25.0% |
| ! | AATTGCATATATATACCTTG+AGG | + | chr5_1:53588729-53588748 | None:intergenic | 25.0% |
| !! | TTGTGTCTATAAGCAAATTT+TGG | - | chr5_1:53588770-53588789 | Msa0736920:three_prime_UTR | 25.0% |
| !! | TGTGTCTATAAGCAAATTTT+GGG | - | chr5_1:53588771-53588790 | Msa0736920:three_prime_UTR | 25.0% |
| !!! | GCCAAAATTTATTTTAATGG+AGG | + | chr5_1:53588840-53588859 | None:intergenic | 25.0% |
| ! | TAAATTATTAATGTTGAGCG+AGG | + | chr5_1:53588902-53588921 | None:intergenic | 25.0% |
| ! | TGTATAAGCAACCTAAAATT+TGG | - | chr5_1:53589074-53589093 | Msa0736920:intron | 25.0% |
| ! | GTATAAGCAACCTAAAATTT+GGG | - | chr5_1:53589075-53589094 | Msa0736920:intron | 25.0% |
| ! | TGAAGAAATTAAGTGCTTAA+GGG | + | chr5_1:53589512-53589531 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTAAGTGCTTA+AGG | + | chr5_1:53589513-53589532 | None:intergenic | 25.0% |
| ! | TCATACCTATATTGTATGAA+AGG | - | chr5_1:53589597-53589616 | Msa0736920:intron | 25.0% |
| ! | CTTCATATATTATGGTCAAA+AGG | + | chr5_1:53589668-53589687 | None:intergenic | 25.0% |
| !! | CTTTTGACCATAATATATGA+AGG | - | chr5_1:53589666-53589685 | Msa0736920:intron | 25.0% |
| ! | CTTTCAACCTTCATATATTA+TGG | + | chr5_1:53589676-53589695 | None:intergenic | 25.0% |
| ! | CATAATATATGAAGGTTGAA+AGG | - | chr5_1:53589674-53589693 | Msa0736920:intron | 25.0% |
| !!! | TGAAAGGCATTCTTAAATTT+TGG | - | chr5_1:53589690-53589709 | Msa0736920:intron | 25.0% |
| ! | AACATTGAAAAACAAAACCA+AGG | + | chr5_1:53589764-53589783 | None:intergenic | 25.0% |
| ! | TAGTCCAAATCCCAAATTTT+AGG | + | chr5_1:53589088-53589107 | None:intergenic | 30.0% |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_1:53589151-53589170 | None:intergenic | 30.0% | |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_1:53589151-53589170 | None:intergenic | 30.0% | |
| ATGAAACAGATTGTAAACCA+AGG | - | chr5_1:53589325-53589344 | Msa0736920:intron | 30.0% | |
| ACTCACCTTTCATACAATAT+AGG | + | chr5_1:53589605-53589624 | None:intergenic | 30.0% | |
| ! | GTATCTAGTATTTTGTACCA+AGG | - | chr5_1:53589712-53589731 | Msa0736920:intron | 30.0% |
| ! | TAGTCCAAATCCCAAATTTT+AGG | + | chr5_1:53589088-53589107 | None:intergenic | 30.0% |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_1:53589151-53589170 | None:intergenic | 30.0% | |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_1:53589151-53589170 | None:intergenic | 30.0% | |
| ATGAAACAGATTGTAAACCA+AGG | - | chr5_1:53589325-53589344 | Msa0736920:intron | 30.0% | |
| ACTCACCTTTCATACAATAT+AGG | + | chr5_1:53589605-53589624 | None:intergenic | 30.0% | |
| ! | GTATCTAGTATTTTGTACCA+AGG | - | chr5_1:53589712-53589731 | Msa0736920:intron | 30.0% |
| AAGTTCCACTTTCACAACAA+TGG | - | chr5_1:53588445-53588464 | Msa0736920:three_prime_UTR | 35.0% | |
| TACATTCTCTAATGTAGCTG+AGG | - | chr5_1:53588520-53588539 | Msa0736920:three_prime_UTR | 35.0% | |
| ! | TTTTTGTGTGATCCTTGAAC+AGG | - | chr5_1:53588680-53588699 | Msa0736920:three_prime_UTR | 35.0% |
| !!! | AGGACTTTTTTTTACTGCCA+AGG | + | chr5_1:53588882-53588901 | None:intergenic | 35.0% |
| ! | GCAACCTAAAATTTGGGATT+TGG | - | chr5_1:53589081-53589100 | Msa0736920:intron | 35.0% |
| ! | TTTTGGCAGAAAAACATGCA+TGG | + | chr5_1:53589387-53589406 | None:intergenic | 35.0% |
| !!! | TTAAGTGCTTAAGGGCATTT+TGG | + | chr5_1:53589504-53589523 | None:intergenic | 35.0% |
| CAAAAGGACAAGATCATACA+TGG | + | chr5_1:53589652-53589671 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTTTGAGGGGACCT+TGG | + | chr5_1:53589732-53589751 | None:intergenic | 35.0% |
| AAGTTCCACTTTCACAACAA+TGG | - | chr5_1:53588445-53588464 | Msa0736920:three_prime_UTR | 35.0% | |
| TACATTCTCTAATGTAGCTG+AGG | - | chr5_1:53588520-53588539 | Msa0736920:three_prime_UTR | 35.0% | |
| ! | TTTTTGTGTGATCCTTGAAC+AGG | - | chr5_1:53588680-53588699 | Msa0736920:three_prime_UTR | 35.0% |
| !!! | AGGACTTTTTTTTACTGCCA+AGG | + | chr5_1:53588882-53588901 | None:intergenic | 35.0% |
| ! | GCAACCTAAAATTTGGGATT+TGG | - | chr5_1:53589081-53589100 | Msa0736920:intron | 35.0% |
| ! | TTTTGGCAGAAAAACATGCA+TGG | + | chr5_1:53589387-53589406 | None:intergenic | 35.0% |
| !!! | TTAAGTGCTTAAGGGCATTT+TGG | + | chr5_1:53589504-53589523 | None:intergenic | 35.0% |
| CAAAAGGACAAGATCATACA+TGG | + | chr5_1:53589652-53589671 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTTTGAGGGGACCT+TGG | + | chr5_1:53589732-53589751 | None:intergenic | 35.0% |
| !! | AGTGGAACTTTGCTTTTGAG+AGG | + | chr5_1:53588435-53588454 | None:intergenic | 40.0% |
| ! | GGTCATCTCTTTGCTTCTTT+TGG | - | chr5_1:53588496-53588515 | Msa0736920:three_prime_UTR | 40.0% |
| ! | GGCATGAAGCACAACATTTT+TGG | + | chr5_1:53589404-53589423 | None:intergenic | 40.0% |
| ! | CATGGTGAGTGTCATTGAAA+AGG | + | chr5_1:53589634-53589653 | None:intergenic | 40.0% |
| GTACTCTTGCAGTACTACAA+AGG | + | chr5_1:53589827-53589846 | None:intergenic | 40.0% | |
| !! | AGTGGAACTTTGCTTTTGAG+AGG | + | chr5_1:53588435-53588454 | None:intergenic | 40.0% |
| ! | GGTCATCTCTTTGCTTCTTT+TGG | - | chr5_1:53588496-53588515 | Msa0736920:three_prime_UTR | 40.0% |
| ! | GGCATGAAGCACAACATTTT+TGG | + | chr5_1:53589404-53589423 | None:intergenic | 40.0% |
| ! | CATGGTGAGTGTCATTGAAA+AGG | + | chr5_1:53589634-53589653 | None:intergenic | 40.0% |
| GTACTCTTGCAGTACTACAA+AGG | + | chr5_1:53589827-53589846 | None:intergenic | 40.0% | |
| TGCTGCCATTGTTGTGAAAG+TGG | + | chr5_1:53588453-53588472 | None:intergenic | 45.0% | |
| CAAAGAGATGACCACCAAGA+TGG | + | chr5_1:53588489-53588508 | None:intergenic | 45.0% | |
| GTGATCCTTGAACAGGCTTA+TGG | - | chr5_1:53588687-53588706 | Msa0736920:three_prime_UTR | 45.0% | |
| TCTCACTATGTCACGCATCA+TGG | + | chr5_1:53589034-53589053 | None:intergenic | 45.0% | |
| ! | TTTGGGATTTGGACTACACG+TGG | - | chr5_1:53589092-53589111 | Msa0736920:intron | 45.0% |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_1:53589143-53589162 | Msa0736920:intron | 45.0% | |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_1:53589143-53589162 | Msa0736920:intron | 45.0% | |
| GAGCAACGATATGTACACCT+TGG | + | chr5_1:53589345-53589364 | None:intergenic | 45.0% | |
| ATACACCAGGAGGAACACAA+AGG | + | chr5_1:53589425-53589444 | None:intergenic | 45.0% | |
| TGTGTTCCTCCTGGTGTATA+TGG | - | chr5_1:53589426-53589445 | Msa0736920:intron | 45.0% | |
| TTGTTGCCATATACACCAGG+AGG | + | chr5_1:53589435-53589454 | None:intergenic | 45.0% | |
| ! | TGCTTGTTGCCATATACACC+AGG | + | chr5_1:53589438-53589457 | None:intergenic | 45.0% |
| TTTGTCCTTGCTACAACAGC+TGG | - | chr5_1:53589460-53589479 | Msa0736920:intron | 45.0% | |
| TGCTGCCATTGTTGTGAAAG+TGG | + | chr5_1:53588453-53588472 | None:intergenic | 45.0% | |
| CAAAGAGATGACCACCAAGA+TGG | + | chr5_1:53588489-53588508 | None:intergenic | 45.0% | |
| GTGATCCTTGAACAGGCTTA+TGG | - | chr5_1:53588687-53588706 | Msa0736920:three_prime_UTR | 45.0% | |
| TCTCACTATGTCACGCATCA+TGG | + | chr5_1:53589034-53589053 | None:intergenic | 45.0% | |
| ! | TTTGGGATTTGGACTACACG+TGG | - | chr5_1:53589092-53589111 | Msa0736920:intron | 45.0% |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_1:53589143-53589162 | Msa0736920:intron | 45.0% | |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_1:53589143-53589162 | Msa0736920:intron | 45.0% | |
| GAGCAACGATATGTACACCT+TGG | + | chr5_1:53589345-53589364 | None:intergenic | 45.0% | |
| ATACACCAGGAGGAACACAA+AGG | + | chr5_1:53589425-53589444 | None:intergenic | 45.0% | |
| TGTGTTCCTCCTGGTGTATA+TGG | - | chr5_1:53589426-53589445 | Msa0736920:intron | 45.0% | |
| TTGTTGCCATATACACCAGG+AGG | + | chr5_1:53589435-53589454 | None:intergenic | 45.0% | |
| ! | TGCTTGTTGCCATATACACC+AGG | + | chr5_1:53589438-53589457 | None:intergenic | 45.0% |
| TTTGTCCTTGCTACAACAGC+TGG | - | chr5_1:53589460-53589479 | Msa0736920:intron | 45.0% | |
| ACAATGGCAGCACGTTGCAA+TGG | - | chr5_1:53588461-53588480 | Msa0736920:three_prime_UTR | 50.0% | |
| ACGTTGCAATGGCTCCATCT+TGG | - | chr5_1:53588472-53588491 | Msa0736920:three_prime_UTR | 50.0% | |
| TTGCAATGGCTCCATCTTGG+TGG | - | chr5_1:53588475-53588494 | Msa0736920:three_prime_UTR | 50.0% | |
| CACGTCCATAAGCCTGTTCA+AGG | + | chr5_1:53588695-53588714 | None:intergenic | 50.0% | |
| CGTGCAAAACTTCGTCCTCA+AGG | - | chr5_1:53588711-53588730 | Msa0736920:three_prime_UTR | 50.0% | |
| TCATGCCTTTGTGTTCCTCC+TGG | - | chr5_1:53589417-53589436 | Msa0736920:intron | 50.0% | |
| GTCTTCCAGCTGTTGTAGCA+AGG | + | chr5_1:53589468-53589487 | None:intergenic | 50.0% | |
| CTACAACAGCTGGAAGACAC+AGG | - | chr5_1:53589470-53589489 | Msa0736920:intron | 50.0% | |
| AACAGCTGGAAGACACAGGA+AGG | - | chr5_1:53589474-53589493 | Msa0736920:intron | 50.0% | |
| ACAATGGCAGCACGTTGCAA+TGG | - | chr5_1:53588461-53588480 | Msa0736920:three_prime_UTR | 50.0% | |
| ACGTTGCAATGGCTCCATCT+TGG | - | chr5_1:53588472-53588491 | Msa0736920:three_prime_UTR | 50.0% | |
| TTGCAATGGCTCCATCTTGG+TGG | - | chr5_1:53588475-53588494 | Msa0736920:three_prime_UTR | 50.0% | |
| CACGTCCATAAGCCTGTTCA+AGG | + | chr5_1:53588695-53588714 | None:intergenic | 50.0% | |
| CGTGCAAAACTTCGTCCTCA+AGG | - | chr5_1:53588711-53588730 | Msa0736920:three_prime_UTR | 50.0% | |
| TCATGCCTTTGTGTTCCTCC+TGG | - | chr5_1:53589417-53589436 | Msa0736920:intron | 50.0% | |
| GTCTTCCAGCTGTTGTAGCA+AGG | + | chr5_1:53589468-53589487 | None:intergenic | 50.0% | |
| CTACAACAGCTGGAAGACAC+AGG | - | chr5_1:53589470-53589489 | Msa0736920:intron | 50.0% | |
| AACAGCTGGAAGACACAGGA+AGG | - | chr5_1:53589474-53589493 | Msa0736920:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 53588378 | 53589932 | 53588378 | ID=Msa0736920;Name=Msa0736920 |
| chr5_1 | mRNA | 53588378 | 53589932 | 53588378 | ID=Msa0736920-mRNA-1;Parent=Msa0736920;Name=Msa0736920-mRNA-1;_AED=0.01;_eAED=0.01;_QI=86|1|1|1|0.5|0.66|3|417|96 |
| chr5_1 | exon | 53588378 | 53588976 | 53588378 | ID=Msa0736920-mRNA-1:exon:15110;Parent=Msa0736920-mRNA-1 |
| chr5_1 | exon | 53589578 | 53589608 | 53589578 | ID=Msa0736920-mRNA-1:exon:15109;Parent=Msa0736920-mRNA-1 |
| chr5_1 | exon | 53589769 | 53589932 | 53589769 | ID=Msa0736920-mRNA-1:exon:15108;Parent=Msa0736920-mRNA-1 |
| chr5_1 | five_prime_UTR | 53589847 | 53589932 | 53589847 | ID=Msa0736920-mRNA-1:five_prime_utr;Parent=Msa0736920-mRNA-1 |
| chr5_1 | CDS | 53589769 | 53589846 | 53589769 | ID=Msa0736920-mRNA-1:cds;Parent=Msa0736920-mRNA-1 |
| chr5_1 | CDS | 53589578 | 53589608 | 53589578 | ID=Msa0736920-mRNA-1:cds;Parent=Msa0736920-mRNA-1 |
| chr5_1 | CDS | 53588795 | 53588976 | 53588795 | ID=Msa0736920-mRNA-1:cds;Parent=Msa0736920-mRNA-1 |
| chr5_1 | three_prime_UTR | 53588378 | 53588794 | 53588378 | ID=Msa0736920-mRNA-1:three_prime_utr;Parent=Msa0736920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
