Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0815940 | XP_013454210.2 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 1.76e-62 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0815940 | sp|P47926|RSI1_SOLLC | 80.435 | 92 | 15 | 2 | 6 | 96 | 7 | 96 | 2.35e-48 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0815940 | A0A396HU88 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 8.43e-63 | 194 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006480 | Msa0815940 | 0.804582 | 2.015896e-49 | -8.615850e-47 |
| Msa0015950 | Msa0815940 | 0.805031 | 1.624191e-49 | -8.615850e-47 |
| Msa0016070 | Msa0815940 | 0.802336 | 5.887920e-49 | -8.615850e-47 |
| Msa0016080 | Msa0815940 | 0.814163 | 1.771969e-51 | -8.615850e-47 |
| Msa0025560 | Msa0815940 | 0.806805 | 6.881169e-50 | -8.615850e-47 |
| Msa0025570 | Msa0815940 | 0.810486 | 1.125665e-50 | -8.615850e-47 |
| Msa0028690 | Msa0815940 | 0.821000 | 5.095058e-53 | -8.615850e-47 |
| Msa0051980 | Msa0815940 | 0.801725 | 7.863117e-49 | -8.615850e-47 |
| Msa0060410 | Msa0815940 | 0.822724 | 2.032398e-53 | -8.615850e-47 |
| Msa0072180 | Msa0815940 | 0.803085 | 4.124505e-49 | -8.615850e-47 |
| Msa0073110 | Msa0815940 | 0.808201 | 3.479928e-50 | -8.615850e-47 |
| Msa0097010 | Msa0815940 | 0.801188 | 1.012865e-48 | -8.615850e-47 |
| Msa0101530 | Msa0815940 | 0.826518 | 2.596696e-54 | -8.615850e-47 |
| Msa0603310 | Msa0815940 | 0.836980 | 6.808786e-57 | -8.615850e-47 |
| Msa0628200 | Msa0815940 | 0.818862 | 1.570442e-52 | -8.615850e-47 |
| Msa0637700 | Msa0815940 | 0.806876 | 6.647677e-50 | -8.615850e-47 |
| Msa0644340 | Msa0815940 | 0.807180 | 5.733557e-50 | -8.615850e-47 |
| Msa0657710 | Msa0815940 | 0.838026 | 3.671726e-57 | -8.615850e-47 |
| Msa0657720 | Msa0815940 | 0.817288 | 3.564671e-52 | -8.615850e-47 |
| Msa0661410 | Msa0815940 | 0.806776 | 6.980885e-50 | -8.615850e-47 |
| Msa0675630 | Msa0815940 | 0.806972 | 6.345734e-50 | -8.615850e-47 |
| Msa0682110 | Msa0815940 | 0.840442 | 8.673753e-58 | -8.615850e-47 |
| Msa0682160 | Msa0815940 | 0.829820 | 4.155469e-55 | -8.615850e-47 |
| Msa0702790 | Msa0815940 | 0.811370 | 7.241798e-51 | -8.615850e-47 |
| Msa0702800 | Msa0815940 | 0.832910 | 7.216293e-56 | -8.615850e-47 |
| Msa0736920 | Msa0815940 | 0.994091 | 1.685824e-204 | -8.615850e-47 |
| Msa0742370 | Msa0815940 | -0.808924 | 2.438424e-50 | -8.615850e-47 |
| Msa0744640 | Msa0815940 | 0.821948 | 3.077181e-53 | -8.615850e-47 |
| Msa0758990 | Msa0815940 | 0.813133 | 2.985809e-51 | -8.615850e-47 |
| Msa0765060 | Msa0815940 | 0.803134 | 4.028966e-49 | -8.615850e-47 |
| Msa0765090 | Msa0815940 | 0.801333 | 9.460293e-49 | -8.615850e-47 |
| Msa0773030 | Msa0815940 | 0.813777 | 2.156173e-51 | -8.615850e-47 |
| Msa0778570 | Msa0815940 | 0.992728 | 4.550084e-195 | -8.615850e-47 |
| Msa0800120 | Msa0815940 | 0.836996 | 6.744835e-57 | -8.615850e-47 |
| Msa0800150 | Msa0815940 | 0.822494 | 2.298459e-53 | -8.615850e-47 |
| Msa0800180 | Msa0815940 | 0.833874 | 4.150664e-56 | -8.615850e-47 |
| Msa0810330 | Msa0815940 | 0.824816 | 6.574531e-54 | -8.615850e-47 |
| Msa0812720 | Msa0815940 | 0.812798 | 3.535899e-51 | -8.615850e-47 |
| Msa0815940 | Msa0828950 | 0.819900 | 9.109769e-53 | -8.615850e-47 |
| Msa0815940 | Msa0828960 | 0.834736 | 2.522169e-56 | -8.615850e-47 |
| Msa0815940 | Msa0833200 | -0.804018 | 2.642526e-49 | -8.615850e-47 |
| Msa0815940 | Msa0838210 | 0.824115 | 9.615224e-54 | -8.615850e-47 |
| Msa0815940 | Msa0841730 | 0.821442 | 4.029684e-53 | -8.615850e-47 |
| Msa0815940 | Msa0850640 | 0.818629 | 1.773835e-52 | -8.615850e-47 |
| Msa0815940 | Msa0862480 | -0.805427 | 1.342195e-49 | -8.615850e-47 |
| Msa0815940 | Msa0873910 | 0.810828 | 9.494228e-51 | -8.615850e-47 |
| Msa0815940 | Msa0882780 | 0.804870 | 1.754789e-49 | -8.615850e-47 |
| Msa0815940 | Msa0901270 | 0.820982 | 5.141980e-53 | -8.615850e-47 |
| Msa0815940 | Msa0901290 | 0.818253 | 2.159062e-52 | -8.615850e-47 |
| Msa0815940 | Msa0905570 | 0.838340 | 3.047484e-57 | -8.615850e-47 |
| Msa0815940 | Msa0906660 | 0.808797 | 2.595315e-50 | -8.615850e-47 |
| Msa0815940 | Msa0907880 | 0.812975 | 3.235041e-51 | -8.615850e-47 |
| Msa0815940 | Msa0910170 | 0.804639 | 1.961721e-49 | -8.615850e-47 |
| Msa0815940 | Msa0925940 | 0.807624 | 4.614440e-50 | -8.615850e-47 |
| Msa0815940 | Msa0974710 | 0.800990 | 1.112236e-48 | -8.615850e-47 |
| Msa0815940 | Msa1001120 | 0.839206 | 1.820431e-57 | -8.615850e-47 |
| Msa0815940 | Msa1015360 | 0.824564 | 7.537241e-54 | -8.615850e-47 |
| Msa0815940 | Msa1019420 | 0.834480 | 2.924991e-56 | -8.615850e-47 |
| Msa0815940 | Msa1029860 | 0.816510 | 5.327128e-52 | -8.615850e-47 |
| Msa0815940 | Msa1035190 | 0.801887 | 7.283581e-49 | -8.615850e-47 |
| Msa0815940 | Msa1075010 | 0.800329 | 1.517059e-48 | -8.615850e-47 |
| Msa0815940 | Msa1075090 | 0.802799 | 4.725245e-49 | -8.615850e-47 |
| Msa0815940 | Msa1080130 | 0.805172 | 1.517702e-49 | -8.615850e-47 |
| Msa0815940 | Msa1089990 | 0.802903 | 4.497091e-49 | -8.615850e-47 |
| Msa0815940 | Msa1092310 | 0.850298 | 1.858273e-60 | -8.615850e-47 |
| Msa0815940 | Msa1111910 | 0.814091 | 1.838385e-51 | -8.615850e-47 |
| Msa0815940 | Msa1115980 | 0.810918 | 9.078577e-51 | -8.615850e-47 |
| Msa0815940 | Msa1116090 | 0.800411 | 1.459814e-48 | -8.615850e-47 |
| Msa0815940 | Msa1133750 | 0.808373 | 3.197834e-50 | -8.615850e-47 |
| Msa0815940 | Msa1136760 | 0.806821 | 6.828129e-50 | -8.615850e-47 |
| Msa0815940 | Msa1143260 | 0.806042 | 9.966583e-50 | -8.615850e-47 |
| Msa0815940 | Msa1154060 | 0.814800 | 1.281119e-51 | -8.615850e-47 |
| Msa0815940 | Msa1154320 | 0.849113 | 3.982721e-60 | -8.615850e-47 |
| Msa0815940 | Msa1167310 | 0.841606 | 4.291566e-58 | -8.615850e-47 |
| Msa0815940 | Msa1184680 | 0.850074 | 2.148285e-60 | -8.615850e-47 |
| Msa0815940 | Msa1185270 | 0.817088 | 3.953566e-52 | -8.615850e-47 |
| Msa0815940 | Msa1187480 | 0.806834 | 6.784270e-50 | -8.615850e-47 |
| Msa0815940 | Msa1193940 | 0.809520 | 1.817268e-50 | -8.615850e-47 |
| Msa0815940 | Msa1202800 | 0.871742 | 5.420470e-67 | -8.615850e-47 |
| Msa0815940 | Msa1203650 | 0.821147 | 4.711265e-53 | -8.615850e-47 |
| Msa0815940 | Msa1211940 | 0.813470 | 2.518873e-51 | -8.615850e-47 |
| Msa0815940 | Msa1212080 | 0.803326 | 3.677460e-49 | -8.615850e-47 |
| Msa0815940 | Msa1238600 | 0.826248 | 3.010524e-54 | -8.615850e-47 |
| Msa0815940 | Msa1239210 | 0.811353 | 7.305170e-51 | -8.615850e-47 |
| Msa0815940 | Msa1248060 | 0.839718 | 1.339880e-57 | -8.615850e-47 |
| Msa0815940 | Msa1254910 | 0.819776 | 9.725558e-53 | -8.615850e-47 |
| Msa0815940 | Msa1255210 | 0.863119 | 3.124703e-64 | -8.615850e-47 |
| Msa0815940 | Msa1268360 | 0.841333 | 5.062664e-58 | -8.615850e-47 |
| Msa0815940 | Msa1268390 | 0.849716 | 2.703995e-60 | -8.615850e-47 |
| Msa0815940 | Msa1268420 | 0.832159 | 1.108077e-55 | -8.615850e-47 |
| Msa0815940 | Msa1269200 | 0.841447 | 4.724949e-58 | -8.615850e-47 |
| Msa0815940 | Msa1284020 | 0.803745 | 3.010021e-49 | -8.615850e-47 |
| Msa0815940 | Msa1289050 | 0.810430 | 1.157389e-50 | -8.615850e-47 |
| Msa0815940 | Msa1289090 | 0.818437 | 1.961288e-52 | -8.615850e-47 |
| Msa0815940 | Msa1295650 | 0.862686 | 4.250397e-64 | -8.615850e-47 |
| Msa0815940 | Msa1301280 | -0.809493 | 1.841588e-50 | -8.615850e-47 |
| Msa0815940 | Msa1336020 | 0.821098 | 4.836188e-53 | -8.615850e-47 |
| Msa0815940 | Msa1343600 | 0.994735 | 9.545852e-210 | -8.615850e-47 |
| Msa0815940 | Msa1384700 | 0.827589 | 1.439086e-54 | -8.615850e-47 |
| Msa0815940 | Msa1407810 | 0.805740 | 1.153784e-49 | -8.615850e-47 |
| Msa0815940 | Msa1412330 | -0.801537 | 8.593329e-49 | -8.615850e-47 |
| Msa0815940 | Msa1422860 | 0.822718 | 2.039361e-53 | -8.615850e-47 |
| Msa0815940 | Msa1430950 | 0.811771 | 5.924685e-51 | -8.615850e-47 |
| Msa0815940 | Msa1433040 | 0.838081 | 3.553951e-57 | -8.615850e-47 |
| Msa0815940 | Msa1433360 | 0.820482 | 6.702257e-53 | -8.615850e-47 |
| Msa0815940 | Msa1437780 | 0.806881 | 6.631414e-50 | -8.615850e-47 |
| Msa0815940 | Msa1445530 | 0.807557 | 4.767947e-50 | -8.615850e-47 |
| Msa0815940 | Msa1455200 | 0.805973 | 1.030536e-49 | -8.615850e-47 |
| Msa0121300 | Msa0815940 | 0.816084 | 6.634064e-52 | -8.615850e-47 |
| Msa0143500 | Msa0815940 | 0.811346 | 7.331887e-51 | -8.615850e-47 |
| Msa0151660 | Msa0815940 | 0.810680 | 1.021940e-50 | -8.615850e-47 |
| Msa0163690 | Msa0815940 | 0.804787 | 1.826675e-49 | -8.615850e-47 |
| Msa0166190 | Msa0815940 | 0.822402 | 2.415373e-53 | -8.615850e-47 |
| Msa0185040 | Msa0815940 | 0.803565 | 3.281019e-49 | -8.615850e-47 |
| Msa0189990 | Msa0815940 | 0.800833 | 1.197154e-48 | -8.615850e-47 |
| Msa0210610 | Msa0815940 | 0.801228 | 9.940204e-49 | -8.615850e-47 |
| Msa0217060 | Msa0815940 | 0.813423 | 2.579339e-51 | -8.615850e-47 |
| Msa0218500 | Msa0815940 | 0.842980 | 1.856082e-58 | -8.615850e-47 |
| Msa0218610 | Msa0815940 | 0.809969 | 1.454493e-50 | -8.615850e-47 |
| Msa0224870 | Msa0815940 | 0.817757 | 2.794315e-52 | -8.615850e-47 |
| Msa0234150 | Msa0815940 | 0.803076 | 4.141673e-49 | -8.615850e-47 |
| Msa0415640 | Msa0815940 | 0.804605 | 1.993812e-49 | -8.615850e-47 |
| Msa0428270 | Msa0815940 | -0.804604 | 1.994658e-49 | -8.615850e-47 |
| Msa0449500 | Msa0815940 | 0.807233 | 5.587477e-50 | -8.615850e-47 |
| Msa0241750 | Msa0815940 | 0.800073 | 1.709768e-48 | -8.615850e-47 |
| Msa0256920 | Msa0815940 | 0.853545 | 2.226510e-61 | -8.615850e-47 |
| Msa0257760 | Msa0815940 | 0.814711 | 1.340775e-51 | -8.615850e-47 |
| Msa0258260 | Msa0815940 | 0.817449 | 3.278153e-52 | -8.615850e-47 |
| Msa0282960 | Msa0815940 | 0.839483 | 1.542708e-57 | -8.615850e-47 |
| Msa0286360 | Msa0815940 | 0.802136 | 6.473592e-49 | -8.615850e-47 |
| Msa0287480 | Msa0815940 | 0.803893 | 2.805481e-49 | -8.615850e-47 |
| Msa0297340 | Msa0815940 | 0.820146 | 8.000192e-53 | -8.615850e-47 |
| Msa0298000 | Msa0815940 | 0.800616 | 1.325720e-48 | -8.615850e-47 |
| Msa0307740 | Msa0815940 | 0.820218 | 7.703655e-53 | -8.615850e-47 |
| Msa0345050 | Msa0815940 | 0.816177 | 6.325893e-52 | -8.615850e-47 |
| Msa0357310 | Msa0815940 | 0.816896 | 4.366851e-52 | -8.615850e-47 |
| Msa0501080 | Msa0815940 | 0.817642 | 2.966866e-52 | -8.615850e-47 |
| Msa0531050 | Msa0815940 | 0.850793 | 1.349481e-60 | -8.615850e-47 |
| Msa0546590 | Msa0815940 | 0.800133 | 1.662782e-48 | -8.615850e-47 |
| Msa0548420 | Msa0815940 | 0.814820 | 1.267718e-51 | -8.615850e-47 |
| Msa0566280 | Msa0815940 | 0.852754 | 3.751090e-61 | -8.615850e-47 |
| Msa0567330 | Msa0815940 | 0.811361 | 7.277404e-51 | -8.615850e-47 |
| Msa0576320 | Msa0815940 | 0.804098 | 2.543201e-49 | -8.615850e-47 |
| Msa0580140 | Msa0815940 | 0.819404 | 1.182377e-52 | -8.615850e-47 |
| Msa0588040 | Msa0815940 | 0.835088 | 2.056649e-56 | -8.615850e-47 |
| Msa0590620 | Msa0815940 | -0.807492 | 4.924077e-50 | -8.615850e-47 |
| Msa0596840 | Msa0815940 | 0.801995 | 6.921266e-49 | -8.615850e-47 |
| Msa0597180 | Msa0815940 | 0.811887 | 5.592121e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0815940 | MtrunA17_Chr5g0434631 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 1.62e-66 | 194 |
| Msa0815940 | MtrunA17_Chr7g0256821 | 73.134 | 67 | 18 | 0 | 30 | 96 | 54 | 120 | 7.90e-33 | 110 |
| Msa0815940 | MtrunA17_Chr5g0415001 | 53.333 | 90 | 39 | 2 | 9 | 96 | 4 | 92 | 1.33e-31 | 106 |
| Msa0815940 | MtrunA17_Chr6g0453241 | 52.577 | 97 | 37 | 1 | 9 | 96 | 11 | 107 | 3.04e-31 | 105 |
| Msa0815940 | MtrunA17_Chr7g0217311 | 51.042 | 96 | 38 | 1 | 10 | 96 | 14 | 109 | 4.08e-30 | 103 |
| Msa0815940 | MtrunA17_Chr3g0092361 | 52.688 | 93 | 40 | 1 | 8 | 96 | 11 | 103 | 1.28e-29 | 101 |
| Msa0815940 | MtrunA17_Chr5g0446671 | 73.333 | 60 | 16 | 0 | 37 | 96 | 6 | 65 | 3.63e-29 | 99.4 |
| Msa0815940 | MtrunA17_Chr3g0078781 | 71.667 | 60 | 17 | 0 | 37 | 96 | 6 | 65 | 8.73e-29 | 98.6 |
| Msa0815940 | MtrunA17_Chr5g0415091 | 61.667 | 60 | 23 | 0 | 37 | 96 | 29 | 88 | 2.22e-23 | 85.5 |
| Msa0815940 | MtrunA17_Chr5g0415111 | 48.276 | 87 | 38 | 1 | 10 | 96 | 4 | 83 | 9.83e-22 | 81.3 |
| Msa0815940 | MtrunA17_Chr5g0415051 | 56.667 | 60 | 26 | 0 | 37 | 96 | 12 | 71 | 3.16e-19 | 74.3 |
| Msa0815940 | MtrunA17_Chr1g0200531 | 42.105 | 95 | 51 | 1 | 6 | 96 | 6 | 100 | 2.21e-18 | 73.2 |
| Msa0815940 | MtrunA17_Chr1g0156601 | 40.816 | 98 | 49 | 2 | 8 | 96 | 4 | 101 | 8.53e-16 | 66.6 |
| Msa0815940 | MtrunA17_Chr1g0156621 | 49.315 | 73 | 36 | 1 | 25 | 96 | 28 | 100 | 1.48e-15 | 65.9 |
| Msa0815940 | MtrunA17_Chr8g0364311 | 44.872 | 78 | 42 | 1 | 20 | 96 | 35 | 112 | 7.94e-15 | 64.3 |
| Msa0815940 | MtrunA17_Chr3g0134511 | 50.847 | 59 | 29 | 0 | 38 | 96 | 27 | 85 | 1.33e-14 | 63.2 |
| Msa0815940 | MtrunA17_Chr1g0207611 | 46.667 | 60 | 32 | 0 | 37 | 96 | 31 | 90 | 5.97e-14 | 61.6 |
| Msa0815940 | MtrunA17_Chr3g0142671 | 39.362 | 94 | 52 | 2 | 8 | 96 | 10 | 103 | 1.12e-13 | 61.2 |
| Msa0815940 | MtrunA17_Chr4g0013021 | 43.939 | 66 | 36 | 1 | 8 | 72 | 3 | 68 | 1.89e-12 | 57.4 |
| Msa0815940 | MtrunA17_Chr1g0152851 | 41.379 | 87 | 51 | 0 | 10 | 96 | 5 | 91 | 1.39e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0815940 | AT1G74670.1 | 58.696 | 92 | 34 | 1 | 9 | 96 | 10 | 101 | 5.65e-34 | 113 |
| Msa0815940 | AT3G02885.1 | 71.233 | 73 | 21 | 0 | 24 | 96 | 25 | 97 | 5.59e-29 | 100 |
| Msa0815940 | AT5G15230.1 | 51.546 | 97 | 38 | 2 | 9 | 96 | 10 | 106 | 6.59e-27 | 95.5 |
| Msa0815940 | AT2G30810.1 | 52.000 | 100 | 36 | 1 | 9 | 96 | 7 | 106 | 2.70e-26 | 94.0 |
| Msa0815940 | AT3G10185.1 | 64.000 | 75 | 27 | 0 | 22 | 96 | 48 | 122 | 6.93e-25 | 90.9 |
| Msa0815940 | AT5G15230.2 | 54.217 | 83 | 35 | 1 | 17 | 96 | 1 | 83 | 7.57e-25 | 89.4 |
| Msa0815940 | AT2G39540.1 | 37.931 | 87 | 47 | 1 | 10 | 96 | 8 | 87 | 8.84e-16 | 66.6 |
| Msa0815940 | AT1G10588.1 | 40.909 | 88 | 45 | 2 | 10 | 96 | 9 | 90 | 1.53e-14 | 63.5 |
| Msa0815940 | AT1G22690.1 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0815940 | AT1G22690.2 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0815940 | AT1G22690.3 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0815940 | AT1G10588.2 | 39.773 | 88 | 45 | 2 | 10 | 96 | 9 | 89 | 5.50e-14 | 62.0 |
| Msa0815940 | AT4G09600.1 | 50.000 | 60 | 30 | 0 | 37 | 96 | 40 | 99 | 6.65e-14 | 62.0 |
| Msa0815940 | AT5G59845.1 | 36.364 | 88 | 49 | 2 | 10 | 96 | 8 | 89 | 7.62e-13 | 59.3 |
| Msa0815940 | AT2G18420.1 | 50.000 | 60 | 30 | 0 | 37 | 96 | 35 | 94 | 9.69e-13 | 58.9 |
| Msa0815940 | AT2G18420.2 | 50.000 | 60 | 30 | 0 | 37 | 96 | 11 | 70 | 1.11e-12 | 58.2 |
| Msa0815940 | AT5G14920.1 | 54.098 | 61 | 27 | 1 | 37 | 96 | 215 | 275 | 6.72e-12 | 59.7 |
| Msa0815940 | AT2G14900.1 | 34.118 | 85 | 45 | 1 | 23 | 96 | 24 | 108 | 2.40e-11 | 55.8 |
Find 37 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGGCATTCTTAAATTT+TGG | 0.170383 | 5_3:-49686514 | Msa0815940:three_prime_UTR |
| TGAGTATATGATATTATATT+TGG | 0.217941 | 5_3:+49686303 | None:intergenic |
| GGTCATCTCTTTGCTTCTTT+TGG | 0.218438 | 5_3:-49687708 | Msa0815940:CDS |
| CTTTCAACCTTCATATATTA+TGG | 0.238802 | 5_3:+49686531 | None:intergenic |
| TTAAGTGCTTAAGGGCATTT+TGG | 0.257598 | 5_3:+49686703 | None:intergenic |
| GTGTTATTTGAATATCATAT+TGG | 0.285158 | 5_3:-49686331 | Msa0815940:three_prime_UTR |
| TGTTATTTGAATATCATATT+GGG | 0.286165 | 5_3:-49686330 | Msa0815940:three_prime_UTR |
| TGTGTTCCTCCTGGTGTATA+TGG | 0.309163 | 5_3:-49686778 | Msa0815940:CDS |
| TTGAAGAAATTAAGTGCTTA+AGG | 0.326452 | 5_3:+49686694 | None:intergenic |
| GTGATCCTTGAACAGGCTTA+TGG | 0.330002 | 5_3:-49687517 | Msa0815940:intron |
| TGAAGAAATTAAGTGCTTAA+GGG | 0.385678 | 5_3:+49686695 | None:intergenic |
| TCATGCCTTTGTGTTCCTCC+TGG | 0.416024 | 5_3:-49686787 | Msa0815940:CDS |
| ACTCACCTTTCATACAATAT+AGG | 0.416602 | 5_3:+49686602 | None:intergenic |
| TTTGTCCTTGCTACAACAGC+TGG | 0.443536 | 5_3:-49686744 | Msa0815940:CDS |
| CTTCATATATTATGGTCAAA+AGG | 0.477709 | 5_3:+49686539 | None:intergenic |
| TCATACCTATATTGTATGAA+AGG | 0.479328 | 5_3:-49686607 | Msa0815940:three_prime_UTR |
| CATGGTGAGTGTCATTGAAA+AGG | 0.482399 | 5_3:+49686573 | None:intergenic |
| TGCTGCCATTGTTGTGAAAG+TGG | 0.523273 | 5_3:+49687754 | None:intergenic |
| CATAATATATGAAGGTTGAA+AGG | 0.525325 | 5_3:-49686530 | Msa0815940:three_prime_UTR |
| TTGCAATGGCTCCATCTTGG+TGG | 0.538056 | 5_3:-49687729 | Msa0815940:CDS |
| CAAAAGGACAAGATCATACA+TGG | 0.556119 | 5_3:+49686555 | None:intergenic |
| CAAAGAGATGACCACCAAGA+TGG | 0.560846 | 5_3:+49687718 | None:intergenic |
| CGTGCAAAACTTCGTCCTCA+AGG | 0.561656 | 5_3:-49687493 | Msa0815940:intron |
| ACGTTGCAATGGCTCCATCT+TGG | 0.582831 | 5_3:-49687732 | Msa0815940:CDS |
| GTCTTCCAGCTGTTGTAGCA+AGG | 0.586689 | 5_3:+49686739 | None:intergenic |
| TACATTCTCTAATGTAGCTG+AGG | 0.595669 | 5_3:-49687684 | Msa0815940:intron |
| GTTATTTGAATATCATATTG+GGG | 0.598241 | 5_3:-49686329 | Msa0815940:three_prime_UTR |
| TGCTTGTTGCCATATACACC+AGG | 0.601222 | 5_3:+49686769 | None:intergenic |
| ACAATGGCAGCACGTTGCAA+TGG | 0.611244 | 5_3:-49687743 | Msa0815940:CDS |
| AAGTTCCACTTTCACAACAA+TGG | 0.613001 | 5_3:-49687759 | Msa0815940:exon |
| CTACAACAGCTGGAAGACAC+AGG | 0.616939 | 5_3:-49686734 | Msa0815940:CDS |
| GAGCAACGATATGTACACCT+TGG | 0.623615 | 5_3:+49686862 | None:intergenic |
| AACAGCTGGAAGACACAGGA+AGG | 0.640099 | 5_3:-49686730 | Msa0815940:CDS |
| GTACTCTTGCAGTACTACAA+AGG | 0.645401 | 5_3:+49686380 | None:intergenic |
| ATGAAACAGATTGTAAACCA+AGG | 0.669189 | 5_3:-49686879 | Msa0815940:intron |
| TTGTTGCCATATACACCAGG+AGG | 0.729916 | 5_3:+49686772 | None:intergenic |
| ATACACCAGGAGGAACACAA+AGG | 0.753714 | 5_3:+49686782 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATAACTTGTTTAAAAAT+TGG | - | chr5_3:49686876-49686895 | Msa0815940:intron | 15.0% |
| !! | GAAAATTATTTAGTAATACT+TGG | - | chr5_3:49687140-49687159 | Msa0815940:intron | 15.0% |
| !! | CCAAATTTGAAAAATAAATA+AGG | + | chr5_3:49687478-49687497 | None:intergenic | 15.0% |
| !!! | CCTTATTTATTTTTCAAATT+TGG | - | chr5_3:49687475-49687494 | Msa0815940:intron | 15.0% |
| !!! | ACACAATAATTTTTTTTTGA+GGG | + | chr5_3:49687656-49687675 | None:intergenic | 15.0% |
| !!! | TGTTATTTGAATATCATATT+GGG | - | chr5_3:49687790-49687809 | Msa0815940:five_prime_UTR | 15.0% |
| !! | TGAGTATATGATATTATATT+TGG | + | chr5_3:49687820-49687839 | None:intergenic | 15.0% |
| !!! | AGTATAACTTGTTTAAAAAT+TGG | - | chr5_3:49686876-49686895 | Msa0815940:intron | 15.0% |
| !! | GAAAATTATTTAGTAATACT+TGG | - | chr5_3:49687140-49687159 | Msa0815940:intron | 15.0% |
| !! | CCAAATTTGAAAAATAAATA+AGG | + | chr5_3:49687478-49687497 | None:intergenic | 15.0% |
| !!! | CCTTATTTATTTTTCAAATT+TGG | - | chr5_3:49687475-49687494 | Msa0815940:intron | 15.0% |
| !!! | ACACAATAATTTTTTTTTGA+GGG | + | chr5_3:49687656-49687675 | None:intergenic | 15.0% |
| !!! | TGTTATTTGAATATCATATT+GGG | - | chr5_3:49687790-49687809 | Msa0815940:five_prime_UTR | 15.0% |
| !! | TGAGTATATGATATTATATT+TGG | + | chr5_3:49687820-49687839 | None:intergenic | 15.0% |
| !! | AAAACCATTTACTATATGAT+TGG | - | chr5_3:49686482-49686501 | Msa0815940:three_prime_UTR | 20.0% |
| !! | GTTCTAATATTTCAAAACTT+TGG | - | chr5_3:49686573-49686592 | Msa0815940:three_prime_UTR | 20.0% |
| !!! | TCCTCCATTAAAATAAATTT+TGG | - | chr5_3:49686752-49686771 | Msa0815940:CDS | 20.0% |
| !!! | ACTGCCAAAATTTATTTTAA+TGG | + | chr5_3:49686759-49686778 | None:intergenic | 20.0% |
| !!! | TAAATTTTGGCAGTTTTATA+AGG | - | chr5_3:49686765-49686784 | Msa0815940:CDS | 20.0% |
| !!! | TTTTATAAGGAATTTTTCCT+TGG | - | chr5_3:49686778-49686797 | Msa0815940:CDS | 20.0% |
| !!! | CACAATAATTTTTTTTTGAG+GGG | + | chr5_3:49687655-49687674 | None:intergenic | 20.0% |
| !!! | CACACAATAATTTTTTTTTG+AGG | + | chr5_3:49687657-49687676 | None:intergenic | 20.0% |
| !!! | GTGTTATTTGAATATCATAT+TGG | - | chr5_3:49687789-49687808 | Msa0815940:five_prime_UTR | 20.0% |
| !! | GTTATTTGAATATCATATTG+GGG | - | chr5_3:49687791-49687810 | Msa0815940:five_prime_UTR | 20.0% |
| !! | AAAACCATTTACTATATGAT+TGG | - | chr5_3:49686482-49686501 | Msa0815940:three_prime_UTR | 20.0% |
| !! | GTTCTAATATTTCAAAACTT+TGG | - | chr5_3:49686573-49686592 | Msa0815940:three_prime_UTR | 20.0% |
| !!! | TCCTCCATTAAAATAAATTT+TGG | - | chr5_3:49686752-49686771 | Msa0815940:CDS | 20.0% |
| !!! | ACTGCCAAAATTTATTTTAA+TGG | + | chr5_3:49686759-49686778 | None:intergenic | 20.0% |
| !!! | TAAATTTTGGCAGTTTTATA+AGG | - | chr5_3:49686765-49686784 | Msa0815940:CDS | 20.0% |
| !!! | TTTTATAAGGAATTTTTCCT+TGG | - | chr5_3:49686778-49686797 | Msa0815940:CDS | 20.0% |
| !!! | CACAATAATTTTTTTTTGAG+GGG | + | chr5_3:49687655-49687674 | None:intergenic | 20.0% |
| !!! | CACACAATAATTTTTTTTTG+AGG | + | chr5_3:49687657-49687676 | None:intergenic | 20.0% |
| !!! | GTGTTATTTGAATATCATAT+TGG | - | chr5_3:49687789-49687808 | Msa0815940:five_prime_UTR | 20.0% |
| !! | GTTATTTGAATATCATATTG+GGG | - | chr5_3:49687791-49687810 | Msa0815940:five_prime_UTR | 20.0% |
| ! | TGATCCAATCATATAGTAAA+TGG | + | chr5_3:49686489-49686508 | None:intergenic | 25.0% |
| ! | AATTGCATATATATACCTTG+AGG | + | chr5_3:49686645-49686664 | None:intergenic | 25.0% |
| !! | TTGTGTCTATAAGCAAATTT+TGG | - | chr5_3:49686686-49686705 | Msa0815940:three_prime_UTR | 25.0% |
| !! | TGTGTCTATAAGCAAATTTT+GGG | - | chr5_3:49686687-49686706 | Msa0815940:three_prime_UTR | 25.0% |
| !!! | GCCAAAATTTATTTTAATGG+AGG | + | chr5_3:49686756-49686775 | None:intergenic | 25.0% |
| ! | TAAATTATTAATGTTGAGCG+AGG | + | chr5_3:49686818-49686837 | None:intergenic | 25.0% |
| ! | TGTATAAGCAACCTAAAATT+TGG | - | chr5_3:49686990-49687009 | Msa0815940:intron | 25.0% |
| ! | GTATAAGCAACCTAAAATTT+GGG | - | chr5_3:49686991-49687010 | Msa0815940:intron | 25.0% |
| ! | TGAAGAAATTAAGTGCTTAA+GGG | + | chr5_3:49687428-49687447 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTAAGTGCTTA+AGG | + | chr5_3:49687429-49687448 | None:intergenic | 25.0% |
| ! | TCATACCTATATTGTATGAA+AGG | - | chr5_3:49687513-49687532 | Msa0815940:intron | 25.0% |
| ! | CTTCATATATTATGGTCAAA+AGG | + | chr5_3:49687584-49687603 | None:intergenic | 25.0% |
| !! | CTTTTGACCATAATATATGA+AGG | - | chr5_3:49687582-49687601 | Msa0815940:intron | 25.0% |
| ! | CTTTCAACCTTCATATATTA+TGG | + | chr5_3:49687592-49687611 | None:intergenic | 25.0% |
| ! | CATAATATATGAAGGTTGAA+AGG | - | chr5_3:49687590-49687609 | Msa0815940:intron | 25.0% |
| !!! | TGAAAGGCATTCTTAAATTT+TGG | - | chr5_3:49687606-49687625 | Msa0815940:intron | 25.0% |
| ! | AAAAAAATTATTGTGTGCCT+TGG | - | chr5_3:49687660-49687679 | Msa0815940:intron | 25.0% |
| ! | AACATTGAAAAACAAAACCA+AGG | + | chr5_3:49687680-49687699 | None:intergenic | 25.0% |
| ! | TGATCCAATCATATAGTAAA+TGG | + | chr5_3:49686489-49686508 | None:intergenic | 25.0% |
| ! | AATTGCATATATATACCTTG+AGG | + | chr5_3:49686645-49686664 | None:intergenic | 25.0% |
| !! | TTGTGTCTATAAGCAAATTT+TGG | - | chr5_3:49686686-49686705 | Msa0815940:three_prime_UTR | 25.0% |
| !! | TGTGTCTATAAGCAAATTTT+GGG | - | chr5_3:49686687-49686706 | Msa0815940:three_prime_UTR | 25.0% |
| !!! | GCCAAAATTTATTTTAATGG+AGG | + | chr5_3:49686756-49686775 | None:intergenic | 25.0% |
| ! | TAAATTATTAATGTTGAGCG+AGG | + | chr5_3:49686818-49686837 | None:intergenic | 25.0% |
| ! | TGTATAAGCAACCTAAAATT+TGG | - | chr5_3:49686990-49687009 | Msa0815940:intron | 25.0% |
| ! | GTATAAGCAACCTAAAATTT+GGG | - | chr5_3:49686991-49687010 | Msa0815940:intron | 25.0% |
| ! | TGAAGAAATTAAGTGCTTAA+GGG | + | chr5_3:49687428-49687447 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTAAGTGCTTA+AGG | + | chr5_3:49687429-49687448 | None:intergenic | 25.0% |
| ! | TCATACCTATATTGTATGAA+AGG | - | chr5_3:49687513-49687532 | Msa0815940:intron | 25.0% |
| ! | CTTCATATATTATGGTCAAA+AGG | + | chr5_3:49687584-49687603 | None:intergenic | 25.0% |
| !! | CTTTTGACCATAATATATGA+AGG | - | chr5_3:49687582-49687601 | Msa0815940:intron | 25.0% |
| ! | CTTTCAACCTTCATATATTA+TGG | + | chr5_3:49687592-49687611 | None:intergenic | 25.0% |
| ! | CATAATATATGAAGGTTGAA+AGG | - | chr5_3:49687590-49687609 | Msa0815940:intron | 25.0% |
| !!! | TGAAAGGCATTCTTAAATTT+TGG | - | chr5_3:49687606-49687625 | Msa0815940:intron | 25.0% |
| ! | AAAAAAATTATTGTGTGCCT+TGG | - | chr5_3:49687660-49687679 | Msa0815940:intron | 25.0% |
| ! | AACATTGAAAAACAAAACCA+AGG | + | chr5_3:49687680-49687699 | None:intergenic | 25.0% |
| ! | TAGTCCAAATCCCAAATTTT+AGG | + | chr5_3:49687004-49687023 | None:intergenic | 30.0% |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_3:49687067-49687086 | None:intergenic | 30.0% | |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_3:49687067-49687086 | None:intergenic | 30.0% | |
| ATGAAACAGATTGTAAACCA+AGG | - | chr5_3:49687241-49687260 | Msa0815940:intron | 30.0% | |
| ACTCACCTTTCATACAATAT+AGG | + | chr5_3:49687521-49687540 | None:intergenic | 30.0% | |
| ! | GTATCTAGTATTTTGTACCA+AGG | - | chr5_3:49687628-49687647 | Msa0815940:intron | 30.0% |
| ! | TAGTCCAAATCCCAAATTTT+AGG | + | chr5_3:49687004-49687023 | None:intergenic | 30.0% |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_3:49687067-49687086 | None:intergenic | 30.0% | |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_3:49687067-49687086 | None:intergenic | 30.0% | |
| ATGAAACAGATTGTAAACCA+AGG | - | chr5_3:49687241-49687260 | Msa0815940:intron | 30.0% | |
| ACTCACCTTTCATACAATAT+AGG | + | chr5_3:49687521-49687540 | None:intergenic | 30.0% | |
| ! | GTATCTAGTATTTTGTACCA+AGG | - | chr5_3:49687628-49687647 | Msa0815940:intron | 30.0% |
| AAGTTCCACTTTCACAACAA+TGG | - | chr5_3:49686361-49686380 | Msa0815940:three_prime_UTR | 35.0% | |
| TACATTCTCTAATGTAGCTG+AGG | - | chr5_3:49686436-49686455 | Msa0815940:three_prime_UTR | 35.0% | |
| ! | TTTTTGTGTGATCCTTGAAC+AGG | - | chr5_3:49686596-49686615 | Msa0815940:three_prime_UTR | 35.0% |
| !!! | AGGACTTTTTTTTACTGCCA+AGG | + | chr5_3:49686798-49686817 | None:intergenic | 35.0% |
| ! | GCAACCTAAAATTTGGGATT+TGG | - | chr5_3:49686997-49687016 | Msa0815940:intron | 35.0% |
| ! | TTTTGGCAGAAAAACATGCA+TGG | + | chr5_3:49687303-49687322 | None:intergenic | 35.0% |
| !!! | TTAAGTGCTTAAGGGCATTT+TGG | + | chr5_3:49687420-49687439 | None:intergenic | 35.0% |
| CAAAAGGACAAGATCATACA+TGG | + | chr5_3:49687568-49687587 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTTTGAGGGGACCT+TGG | + | chr5_3:49687648-49687667 | None:intergenic | 35.0% |
| AAGTTCCACTTTCACAACAA+TGG | - | chr5_3:49686361-49686380 | Msa0815940:three_prime_UTR | 35.0% | |
| TACATTCTCTAATGTAGCTG+AGG | - | chr5_3:49686436-49686455 | Msa0815940:three_prime_UTR | 35.0% | |
| ! | TTTTTGTGTGATCCTTGAAC+AGG | - | chr5_3:49686596-49686615 | Msa0815940:three_prime_UTR | 35.0% |
| !!! | AGGACTTTTTTTTACTGCCA+AGG | + | chr5_3:49686798-49686817 | None:intergenic | 35.0% |
| ! | GCAACCTAAAATTTGGGATT+TGG | - | chr5_3:49686997-49687016 | Msa0815940:intron | 35.0% |
| ! | TTTTGGCAGAAAAACATGCA+TGG | + | chr5_3:49687303-49687322 | None:intergenic | 35.0% |
| !!! | TTAAGTGCTTAAGGGCATTT+TGG | + | chr5_3:49687420-49687439 | None:intergenic | 35.0% |
| CAAAAGGACAAGATCATACA+TGG | + | chr5_3:49687568-49687587 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTTTGAGGGGACCT+TGG | + | chr5_3:49687648-49687667 | None:intergenic | 35.0% |
| !! | AGTGGAACTTTGCTTTTGAG+AGG | + | chr5_3:49686351-49686370 | None:intergenic | 40.0% |
| ! | GGTCATCTCTTTGCTTCTTT+TGG | - | chr5_3:49686412-49686431 | Msa0815940:three_prime_UTR | 40.0% |
| ! | GGCATGAAGCACAACATTTT+TGG | + | chr5_3:49687320-49687339 | None:intergenic | 40.0% |
| ! | CATGGTGAGTGTCATTGAAA+AGG | + | chr5_3:49687550-49687569 | None:intergenic | 40.0% |
| GTACTCTTGCAGTACTACAA+AGG | + | chr5_3:49687743-49687762 | None:intergenic | 40.0% | |
| !! | AGTGGAACTTTGCTTTTGAG+AGG | + | chr5_3:49686351-49686370 | None:intergenic | 40.0% |
| ! | GGTCATCTCTTTGCTTCTTT+TGG | - | chr5_3:49686412-49686431 | Msa0815940:three_prime_UTR | 40.0% |
| ! | GGCATGAAGCACAACATTTT+TGG | + | chr5_3:49687320-49687339 | None:intergenic | 40.0% |
| ! | CATGGTGAGTGTCATTGAAA+AGG | + | chr5_3:49687550-49687569 | None:intergenic | 40.0% |
| GTACTCTTGCAGTACTACAA+AGG | + | chr5_3:49687743-49687762 | None:intergenic | 40.0% | |
| TGCTGCCATTGTTGTGAAAG+TGG | + | chr5_3:49686369-49686388 | None:intergenic | 45.0% | |
| CAAAGAGATGACCACCAAGA+TGG | + | chr5_3:49686405-49686424 | None:intergenic | 45.0% | |
| GTGATCCTTGAACAGGCTTA+TGG | - | chr5_3:49686603-49686622 | Msa0815940:three_prime_UTR | 45.0% | |
| TCTCACTATGTCACGCATCA+TGG | + | chr5_3:49686950-49686969 | None:intergenic | 45.0% | |
| ! | TTTGGGATTTGGACTACACG+TGG | - | chr5_3:49687008-49687027 | Msa0815940:intron | 45.0% |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_3:49687059-49687078 | Msa0815940:intron | 45.0% | |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_3:49687059-49687078 | Msa0815940:intron | 45.0% | |
| GAGCAACGATATGTACACCT+TGG | + | chr5_3:49687261-49687280 | None:intergenic | 45.0% | |
| ATACACCAGGAGGAACACAA+AGG | + | chr5_3:49687341-49687360 | None:intergenic | 45.0% | |
| TGTGTTCCTCCTGGTGTATA+TGG | - | chr5_3:49687342-49687361 | Msa0815940:intron | 45.0% | |
| TTGTTGCCATATACACCAGG+AGG | + | chr5_3:49687351-49687370 | None:intergenic | 45.0% | |
| ! | TGCTTGTTGCCATATACACC+AGG | + | chr5_3:49687354-49687373 | None:intergenic | 45.0% |
| TTTGTCCTTGCTACAACAGC+TGG | - | chr5_3:49687376-49687395 | Msa0815940:intron | 45.0% | |
| TGCTGCCATTGTTGTGAAAG+TGG | + | chr5_3:49686369-49686388 | None:intergenic | 45.0% | |
| CAAAGAGATGACCACCAAGA+TGG | + | chr5_3:49686405-49686424 | None:intergenic | 45.0% | |
| GTGATCCTTGAACAGGCTTA+TGG | - | chr5_3:49686603-49686622 | Msa0815940:three_prime_UTR | 45.0% | |
| TCTCACTATGTCACGCATCA+TGG | + | chr5_3:49686950-49686969 | None:intergenic | 45.0% | |
| ! | TTTGGGATTTGGACTACACG+TGG | - | chr5_3:49687008-49687027 | Msa0815940:intron | 45.0% |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_3:49687059-49687078 | Msa0815940:intron | 45.0% | |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_3:49687059-49687078 | Msa0815940:intron | 45.0% | |
| GAGCAACGATATGTACACCT+TGG | + | chr5_3:49687261-49687280 | None:intergenic | 45.0% | |
| ATACACCAGGAGGAACACAA+AGG | + | chr5_3:49687341-49687360 | None:intergenic | 45.0% | |
| TGTGTTCCTCCTGGTGTATA+TGG | - | chr5_3:49687342-49687361 | Msa0815940:intron | 45.0% | |
| TTGTTGCCATATACACCAGG+AGG | + | chr5_3:49687351-49687370 | None:intergenic | 45.0% | |
| ! | TGCTTGTTGCCATATACACC+AGG | + | chr5_3:49687354-49687373 | None:intergenic | 45.0% |
| TTTGTCCTTGCTACAACAGC+TGG | - | chr5_3:49687376-49687395 | Msa0815940:intron | 45.0% | |
| ACAATGGCAGCACGTTGCAA+TGG | - | chr5_3:49686377-49686396 | Msa0815940:three_prime_UTR | 50.0% | |
| ACGTTGCAATGGCTCCATCT+TGG | - | chr5_3:49686388-49686407 | Msa0815940:three_prime_UTR | 50.0% | |
| TTGCAATGGCTCCATCTTGG+TGG | - | chr5_3:49686391-49686410 | Msa0815940:three_prime_UTR | 50.0% | |
| CACGTCCATAAGCCTGTTCA+AGG | + | chr5_3:49686611-49686630 | None:intergenic | 50.0% | |
| CGTGCAAAACTTCGTCCTCA+AGG | - | chr5_3:49686627-49686646 | Msa0815940:three_prime_UTR | 50.0% | |
| TCATGCCTTTGTGTTCCTCC+TGG | - | chr5_3:49687333-49687352 | Msa0815940:intron | 50.0% | |
| GTCTTCCAGCTGTTGTAGCA+AGG | + | chr5_3:49687384-49687403 | None:intergenic | 50.0% | |
| CTACAACAGCTGGAAGACAC+AGG | - | chr5_3:49687386-49687405 | Msa0815940:intron | 50.0% | |
| AACAGCTGGAAGACACAGGA+AGG | - | chr5_3:49687390-49687409 | Msa0815940:intron | 50.0% | |
| ACAATGGCAGCACGTTGCAA+TGG | - | chr5_3:49686377-49686396 | Msa0815940:three_prime_UTR | 50.0% | |
| ACGTTGCAATGGCTCCATCT+TGG | - | chr5_3:49686388-49686407 | Msa0815940:three_prime_UTR | 50.0% | |
| TTGCAATGGCTCCATCTTGG+TGG | - | chr5_3:49686391-49686410 | Msa0815940:three_prime_UTR | 50.0% | |
| CACGTCCATAAGCCTGTTCA+AGG | + | chr5_3:49686611-49686630 | None:intergenic | 50.0% | |
| CGTGCAAAACTTCGTCCTCA+AGG | - | chr5_3:49686627-49686646 | Msa0815940:three_prime_UTR | 50.0% | |
| TCATGCCTTTGTGTTCCTCC+TGG | - | chr5_3:49687333-49687352 | Msa0815940:intron | 50.0% | |
| GTCTTCCAGCTGTTGTAGCA+AGG | + | chr5_3:49687384-49687403 | None:intergenic | 50.0% | |
| CTACAACAGCTGGAAGACAC+AGG | - | chr5_3:49687386-49687405 | Msa0815940:intron | 50.0% | |
| AACAGCTGGAAGACACAGGA+AGG | - | chr5_3:49687390-49687409 | Msa0815940:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 49686294 | 49687848 | 49686294 | ID=Msa0815940;Name=Msa0815940 |
| chr5_3 | mRNA | 49686294 | 49687848 | 49686294 | ID=Msa0815940-mRNA-1;Parent=Msa0815940;Name=Msa0815940-mRNA-1;_AED=0.01;_eAED=0.01;_QI=86|1|1|1|0.5|0.66|3|417|96 |
| chr5_3 | exon | 49686294 | 49686892 | 49686294 | ID=Msa0815940-mRNA-1:exon:14939;Parent=Msa0815940-mRNA-1 |
| chr5_3 | exon | 49687494 | 49687524 | 49687494 | ID=Msa0815940-mRNA-1:exon:14938;Parent=Msa0815940-mRNA-1 |
| chr5_3 | exon | 49687685 | 49687848 | 49687685 | ID=Msa0815940-mRNA-1:exon:14937;Parent=Msa0815940-mRNA-1 |
| chr5_3 | five_prime_UTR | 49687763 | 49687848 | 49687763 | ID=Msa0815940-mRNA-1:five_prime_utr;Parent=Msa0815940-mRNA-1 |
| chr5_3 | CDS | 49687685 | 49687762 | 49687685 | ID=Msa0815940-mRNA-1:cds;Parent=Msa0815940-mRNA-1 |
| chr5_3 | CDS | 49687494 | 49687524 | 49687494 | ID=Msa0815940-mRNA-1:cds;Parent=Msa0815940-mRNA-1 |
| chr5_3 | CDS | 49686711 | 49686892 | 49686711 | ID=Msa0815940-mRNA-1:cds;Parent=Msa0815940-mRNA-1 |
| chr5_3 | three_prime_UTR | 49686294 | 49686710 | 49686294 | ID=Msa0815940-mRNA-1:three_prime_utr;Parent=Msa0815940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
