Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343600 | XP_013454210.2 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 1.76e-62 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343600 | sp|P47926|RSI1_SOLLC | 80.435 | 92 | 15 | 2 | 6 | 96 | 7 | 96 | 2.35e-48 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343600 | A0A396HU88 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 8.43e-63 | 194 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006480 | Msa1343600 | 0.811733 | 6.038748e-51 | -8.615850e-47 |
| Msa0011440 | Msa1343600 | -0.807285 | 5.446373e-50 | -8.615850e-47 |
| Msa0015950 | Msa1343600 | 0.805445 | 1.330256e-49 | -8.615850e-47 |
| Msa0015960 | Msa1343600 | 0.801558 | 8.507582e-49 | -8.615850e-47 |
| Msa0016070 | Msa1343600 | 0.802380 | 5.766254e-49 | -8.615850e-47 |
| Msa0016080 | Msa1343600 | 0.816215 | 6.202806e-52 | -8.615850e-47 |
| Msa0025560 | Msa1343600 | 0.814048 | 1.878573e-51 | -8.615850e-47 |
| Msa0025570 | Msa1343600 | 0.819172 | 1.335604e-52 | -8.615850e-47 |
| Msa0028690 | Msa1343600 | 0.828875 | 7.048000e-55 | -8.615850e-47 |
| Msa0042950 | Msa1343600 | -0.804354 | 2.249465e-49 | -8.615850e-47 |
| Msa0047660 | Msa1343600 | -0.800804 | 1.213917e-48 | -8.615850e-47 |
| Msa0051980 | Msa1343600 | 0.802870 | 4.569208e-49 | -8.615850e-47 |
| Msa0060410 | Msa1343600 | 0.832206 | 1.078956e-55 | -8.615850e-47 |
| Msa0060670 | Msa1343600 | 0.805345 | 1.395977e-49 | -8.615850e-47 |
| Msa0063940 | Msa1343600 | 0.812314 | 4.512012e-51 | -8.615850e-47 |
| Msa0072180 | Msa1343600 | 0.808528 | 2.963037e-50 | -8.615850e-47 |
| Msa0073110 | Msa1343600 | 0.816841 | 4.491643e-52 | -8.615850e-47 |
| Msa0095890 | Msa1343600 | -0.806428 | 8.264121e-50 | -8.615850e-47 |
| Msa0097010 | Msa1343600 | 0.802241 | 6.158730e-49 | -8.615850e-47 |
| Msa0100540 | Msa1343600 | 0.803934 | 2.750252e-49 | -8.615850e-47 |
| Msa0101530 | Msa1343600 | 0.834824 | 2.397187e-56 | -8.615850e-47 |
| Msa0119240 | Msa1343600 | 0.811551 | 6.615451e-51 | -8.615850e-47 |
| Msa0603310 | Msa1343600 | 0.844097 | 9.332646e-59 | -8.615850e-47 |
| Msa0628200 | Msa1343600 | 0.820161 | 7.937616e-53 | -8.615850e-47 |
| Msa0637700 | Msa1343600 | 0.810999 | 8.718598e-51 | -8.615850e-47 |
| Msa0644330 | Msa1343600 | 0.806139 | 9.509322e-50 | -8.615850e-47 |
| Msa0644340 | Msa1343600 | 0.817106 | 3.915762e-52 | -8.615850e-47 |
| Msa0657710 | Msa1343600 | 0.851163 | 1.061669e-60 | -8.615850e-47 |
| Msa0657720 | Msa1343600 | 0.832543 | 8.905597e-56 | -8.615850e-47 |
| Msa0658150 | Msa1343600 | 0.801540 | 8.580143e-49 | -8.615850e-47 |
| Msa0661410 | Msa1343600 | 0.807738 | 4.364607e-50 | -8.615850e-47 |
| Msa0661420 | Msa1343600 | 0.801636 | 8.201545e-49 | -8.615850e-47 |
| Msa0675630 | Msa1343600 | 0.807271 | 5.483381e-50 | -8.615850e-47 |
| Msa0676570 | Msa1343600 | -0.802159 | 6.403310e-49 | -8.615850e-47 |
| Msa0682110 | Msa1343600 | 0.845529 | 3.837991e-59 | -8.615850e-47 |
| Msa0682160 | Msa1343600 | 0.836413 | 9.497378e-57 | -8.615850e-47 |
| Msa0686830 | Msa1343600 | 0.802236 | 6.172811e-49 | -8.615850e-47 |
| Msa0702790 | Msa1343600 | 0.827791 | 1.286927e-54 | -8.615850e-47 |
| Msa0702800 | Msa1343600 | 0.847149 | 1.388084e-59 | -8.615850e-47 |
| Msa0703000 | Msa1343600 | 0.801004 | 1.104810e-48 | -8.615850e-47 |
| Msa0707330 | Msa1343600 | 0.807661 | 4.533578e-50 | -8.615850e-47 |
| Msa0712880 | Msa1343600 | 0.810424 | 1.160537e-50 | -8.615850e-47 |
| Msa0719750 | Msa1343600 | 0.807226 | 5.604459e-50 | -8.615850e-47 |
| Msa0731590 | Msa1343600 | 0.804525 | 2.071396e-49 | -8.615850e-47 |
| Msa0736920 | Msa1343600 | 0.998634 | 3.456673e-271 | -8.615850e-47 |
| Msa0741040 | Msa1343600 | 0.809322 | 2.003364e-50 | -8.615850e-47 |
| Msa0742370 | Msa1343600 | -0.826427 | 2.728515e-54 | -8.615850e-47 |
| Msa0744640 | Msa1343600 | 0.828236 | 1.005847e-54 | -8.615850e-47 |
| Msa0758990 | Msa1343600 | 0.815980 | 7.001156e-52 | -8.615850e-47 |
| Msa0765060 | Msa1343600 | 0.810010 | 1.425603e-50 | -8.615850e-47 |
| Msa0765090 | Msa1343600 | 0.807121 | 5.899671e-50 | -8.615850e-47 |
| Msa0769540 | Msa1343600 | 0.801488 | 8.795943e-49 | -8.615850e-47 |
| Msa0771790 | Msa1343600 | 0.804807 | 1.809292e-49 | -8.615850e-47 |
| Msa0773030 | Msa1343600 | 0.818782 | 1.638181e-52 | -8.615850e-47 |
| Msa0778570 | Msa1343600 | 0.995128 | 2.816176e-213 | -8.615850e-47 |
| Msa0800120 | Msa1343600 | 0.842460 | 2.551862e-58 | -8.615850e-47 |
| Msa0800150 | Msa1343600 | 0.832667 | 8.292354e-56 | -8.615850e-47 |
| Msa0800180 | Msa1343600 | 0.841730 | 3.979286e-58 | -8.615850e-47 |
| Msa0802760 | Msa1343600 | 0.806426 | 8.273013e-50 | -8.615850e-47 |
| Msa0810330 | Msa1343600 | 0.831047 | 2.082936e-55 | -8.615850e-47 |
| Msa0812720 | Msa1343600 | 0.817242 | 3.650608e-52 | -8.615850e-47 |
| Msa0815940 | Msa1343600 | 0.994735 | 9.545852e-210 | -8.615850e-47 |
| Msa0823480 | Msa1343600 | -0.803389 | 3.569146e-49 | -8.615850e-47 |
| Msa0828950 | Msa1343600 | 0.835959 | 1.238244e-56 | -8.615850e-47 |
| Msa0828960 | Msa1343600 | 0.848430 | 6.161354e-60 | -8.615850e-47 |
| Msa0829250 | Msa1343600 | -0.801219 | 9.982133e-49 | -8.615850e-47 |
| Msa0833200 | Msa1343600 | -0.811076 | 8.389638e-51 | -8.615850e-47 |
| Msa0838210 | Msa1343600 | 0.824750 | 6.816751e-54 | -8.615850e-47 |
| Msa0841730 | Msa1343600 | 0.827973 | 1.163848e-54 | -8.615850e-47 |
| Msa0121300 | Msa1343600 | 0.825929 | 3.585358e-54 | -8.615850e-47 |
| Msa0143500 | Msa1343600 | 0.815505 | 8.932598e-52 | -8.615850e-47 |
| Msa0151660 | Msa1343600 | 0.814714 | 1.338308e-51 | -8.615850e-47 |
| Msa0163690 | Msa1343600 | 0.809338 | 1.987564e-50 | -8.615850e-47 |
| Msa0166190 | Msa1343600 | 0.830608 | 2.668676e-55 | -8.615850e-47 |
| Msa0168750 | Msa1343600 | 0.806267 | 8.937113e-50 | -8.615850e-47 |
| Msa0185040 | Msa1343600 | 0.806680 | 7.312439e-50 | -8.615850e-47 |
| Msa0187540 | Msa1343600 | 0.808915 | 2.448965e-50 | -8.615850e-47 |
| Msa0189990 | Msa1343600 | 0.808104 | 3.649228e-50 | -8.615850e-47 |
| Msa0198990 | Msa1343600 | 0.804615 | 1.984300e-49 | -8.615850e-47 |
| Msa0210610 | Msa1343600 | 0.809101 | 2.234992e-50 | -8.615850e-47 |
| Msa0217060 | Msa1343600 | 0.822192 | 2.701193e-53 | -8.615850e-47 |
| Msa0218500 | Msa1343600 | 0.853341 | 2.547570e-61 | -8.615850e-47 |
| Msa0218610 | Msa1343600 | 0.819789 | 9.655075e-53 | -8.615850e-47 |
| Msa0224870 | Msa1343600 | 0.823243 | 1.538602e-53 | -8.615850e-47 |
| Msa0225790 | Msa1343600 | -0.803337 | 3.658170e-49 | -8.615850e-47 |
| Msa0234150 | Msa1343600 | 0.816076 | 6.663500e-52 | -8.615850e-47 |
| Msa1238600 | Msa1343600 | 0.833351 | 5.605467e-56 | -8.615850e-47 |
| Msa1239210 | Msa1343600 | 0.813958 | 1.966702e-51 | -8.615850e-47 |
| Msa1248060 | Msa1343600 | 0.838293 | 3.133474e-57 | -8.615850e-47 |
| Msa1254910 | Msa1343600 | 0.830864 | 2.309116e-55 | -8.615850e-47 |
| Msa1255210 | Msa1343600 | 0.872868 | 2.285041e-67 | -8.615850e-47 |
| Msa1268360 | Msa1343600 | 0.847054 | 1.473660e-59 | -8.615850e-47 |
| Msa1268390 | Msa1343600 | 0.859104 | 5.208177e-63 | -8.615850e-47 |
| Msa1268420 | Msa1343600 | 0.841289 | 5.200316e-58 | -8.615850e-47 |
| Msa1269200 | Msa1343600 | 0.845501 | 3.905013e-59 | -8.615850e-47 |
| Msa1273320 | Msa1343600 | 0.808602 | 2.857020e-50 | -8.615850e-47 |
| Msa1283930 | Msa1343600 | 0.813590 | 2.369971e-51 | -8.615850e-47 |
| Msa1284020 | Msa1343600 | 0.810818 | 9.539372e-51 | -8.615850e-47 |
| Msa1289050 | Msa1343600 | 0.813484 | 2.500116e-51 | -8.615850e-47 |
| Msa1289090 | Msa1343600 | 0.821141 | 4.726126e-53 | -8.615850e-47 |
| Msa1295650 | Msa1343600 | 0.872168 | 3.913709e-67 | -8.615850e-47 |
| Msa1301280 | Msa1343600 | -0.818257 | 2.154710e-52 | -8.615850e-47 |
| Msa1322960 | Msa1343600 | 0.811122 | 8.197952e-51 | -8.615850e-47 |
| Msa1331570 | Msa1343600 | -0.812261 | 4.633620e-51 | -8.615850e-47 |
| Msa1336020 | Msa1343600 | 0.824225 | 9.059548e-54 | -8.615850e-47 |
| Msa1343600 | Msa1354360 | -0.805348 | 1.394445e-49 | -8.615850e-47 |
| Msa1343600 | Msa1354400 | -0.808265 | 3.371337e-50 | -8.615850e-47 |
| Msa1343600 | Msa1354520 | -0.808780 | 2.617053e-50 | -8.615850e-47 |
| Msa1343600 | Msa1354530 | -0.806481 | 8.054489e-50 | -8.615850e-47 |
| Msa1343600 | Msa1354650 | -0.809236 | 2.090177e-50 | -8.615850e-47 |
| Msa1343600 | Msa1354660 | -0.808852 | 2.526140e-50 | -8.615850e-47 |
| Msa1343600 | Msa1354780 | -0.804913 | 1.719326e-49 | -8.615850e-47 |
| Msa1343600 | Msa1354790 | -0.809588 | 1.756947e-50 | -8.615850e-47 |
| Msa1343600 | Msa1354960 | -0.812070 | 5.101412e-51 | -8.615850e-47 |
| Msa1343600 | Msa1361980 | 0.801535 | 8.602271e-49 | -8.615850e-47 |
| Msa1343600 | Msa1365990 | -0.804144 | 2.486688e-49 | -8.615850e-47 |
| Msa1343600 | Msa1366020 | -0.807070 | 6.049666e-50 | -8.615850e-47 |
| Msa1343600 | Msa1366030 | -0.809574 | 1.769031e-50 | -8.615850e-47 |
| Msa1343600 | Msa1366060 | -0.808215 | 3.455742e-50 | -8.615850e-47 |
| Msa1343600 | Msa1368260 | -0.810442 | 1.150307e-50 | -8.615850e-47 |
| Msa1343600 | Msa1368390 | 0.802470 | 5.525015e-49 | -8.615850e-47 |
| Msa1343600 | Msa1384700 | 0.840124 | 1.050421e-57 | -8.615850e-47 |
| Msa1343600 | Msa1385360 | -0.804269 | 2.342393e-49 | -8.615850e-47 |
| Msa1343600 | Msa1385390 | -0.808549 | 2.933160e-50 | -8.615850e-47 |
| Msa1343600 | Msa1386830 | 0.801315 | 9.543211e-49 | -8.615850e-47 |
| Msa1343600 | Msa1391130 | -0.808220 | 3.447208e-50 | -8.615850e-47 |
| Msa1343600 | Msa1391140 | -0.809885 | 1.516479e-50 | -8.615850e-47 |
| Msa1343600 | Msa1391260 | -0.803390 | 3.567002e-49 | -8.615850e-47 |
| Msa1343600 | Msa1395080 | 0.801870 | 7.341856e-49 | -8.615850e-47 |
| Msa1343600 | Msa1404050 | 0.800319 | 1.523772e-48 | -8.615850e-47 |
| Msa1343600 | Msa1407810 | 0.814586 | 1.429090e-51 | -8.615850e-47 |
| Msa1343600 | Msa1408390 | 0.807755 | 4.327967e-50 | -8.615850e-47 |
| Msa1343600 | Msa1412330 | -0.809094 | 2.242264e-50 | -8.615850e-47 |
| Msa1343600 | Msa1413450 | 0.801366 | 9.312856e-49 | -8.615850e-47 |
| Msa1343600 | Msa1422860 | 0.838244 | 3.226395e-57 | -8.615850e-47 |
| Msa1343600 | Msa1430950 | 0.820212 | 7.728616e-53 | -8.615850e-47 |
| Msa1343600 | Msa1433040 | 0.847865 | 8.820824e-60 | -8.615850e-47 |
| Msa1343600 | Msa1433360 | 0.831658 | 1.473763e-55 | -8.615850e-47 |
| Msa1343600 | Msa1436400 | 0.800326 | 1.518786e-48 | -8.615850e-47 |
| Msa1343600 | Msa1437780 | 0.815780 | 7.758268e-52 | -8.615850e-47 |
| Msa1343600 | Msa1445530 | 0.820378 | 7.080531e-53 | -8.615850e-47 |
| Msa1343600 | Msa1455200 | 0.807703 | 4.440360e-50 | -8.615850e-47 |
| Msa0365210 | Msa1343600 | 0.814457 | 1.525650e-51 | -8.615850e-47 |
| Msa0394500 | Msa1343600 | 0.812483 | 4.144104e-51 | -8.615850e-47 |
| Msa0405460 | Msa1343600 | -0.802323 | 5.925120e-49 | -8.615850e-47 |
| Msa0405550 | Msa1343600 | -0.802348 | 5.854753e-49 | -8.615850e-47 |
| Msa0428270 | Msa1343600 | -0.809245 | 2.081099e-50 | -8.615850e-47 |
| Msa0449500 | Msa1343600 | 0.810092 | 1.368829e-50 | -8.615850e-47 |
| Msa0459930 | Msa1343600 | 0.800237 | 1.583922e-48 | -8.615850e-47 |
| Msa0480900 | Msa1343600 | -0.809328 | 1.997393e-50 | -8.615850e-47 |
| Msa0481630 | Msa1343600 | 0.806313 | 8.742336e-50 | -8.615850e-47 |
| Msa0983600 | Msa1343600 | -0.809019 | 2.327411e-50 | -8.615850e-47 |
| Msa0983610 | Msa1343600 | -0.808685 | 2.743317e-50 | -8.615850e-47 |
| Msa1001120 | Msa1343600 | 0.842777 | 2.101856e-58 | -8.615850e-47 |
| Msa1015360 | Msa1343600 | 0.835940 | 1.252108e-56 | -8.615850e-47 |
| Msa1019420 | Msa1343600 | 0.845449 | 4.032820e-59 | -8.615850e-47 |
| Msa1029860 | Msa1343600 | 0.818414 | 1.984993e-52 | -8.615850e-47 |
| Msa1034950 | Msa1343600 | 0.803806 | 2.924516e-49 | -8.615850e-47 |
| Msa1035190 | Msa1343600 | 0.805085 | 1.582625e-49 | -8.615850e-47 |
| Msa1056890 | Msa1343600 | 0.804269 | 2.342670e-49 | -8.615850e-47 |
| Msa1075010 | Msa1343600 | 0.804936 | 1.700148e-49 | -8.615850e-47 |
| Msa1075090 | Msa1343600 | 0.805954 | 1.040351e-49 | -8.615850e-47 |
| Msa1080130 | Msa1343600 | 0.809383 | 1.944044e-50 | -8.615850e-47 |
| Msa1086760 | Msa1343600 | -0.801575 | 8.442216e-49 | -8.615850e-47 |
| Msa1086770 | Msa1343600 | -0.803150 | 3.998158e-49 | -8.615850e-47 |
| Msa1086940 | Msa1343600 | -0.804665 | 1.937284e-49 | -8.615850e-47 |
| Msa1087070 | Msa1343600 | -0.808658 | 2.779254e-50 | -8.615850e-47 |
| Msa1087090 | Msa1343600 | -0.807095 | 5.975830e-50 | -8.615850e-47 |
| Msa1089990 | Msa1343600 | 0.812901 | 3.357801e-51 | -8.615850e-47 |
| Msa1092310 | Msa1343600 | 0.862113 | 6.375978e-64 | -8.615850e-47 |
| Msa0241750 | Msa1343600 | 0.813846 | 2.081033e-51 | -8.615850e-47 |
| Msa0256920 | Msa1343600 | 0.860362 | 2.178100e-63 | -8.615850e-47 |
| Msa0257760 | Msa1343600 | 0.813942 | 1.982626e-51 | -8.615850e-47 |
| Msa0258260 | Msa1343600 | 0.828421 | 9.075250e-55 | -8.615850e-47 |
| Msa0260580 | Msa1343600 | -0.800293 | 1.542377e-48 | -8.615850e-47 |
| Msa0269170 | Msa1343600 | -0.813527 | 2.446433e-51 | -8.615850e-47 |
| Msa0282960 | Msa1343600 | 0.844319 | 8.138178e-59 | -8.615850e-47 |
| Msa0286360 | Msa1343600 | 0.806552 | 7.784528e-50 | -8.615850e-47 |
| Msa0287480 | Msa1343600 | 0.820173 | 7.890033e-53 | -8.615850e-47 |
| Msa0297340 | Msa1343600 | 0.827024 | 1.965402e-54 | -8.615850e-47 |
| Msa0298000 | Msa1343600 | 0.806875 | 6.650938e-50 | -8.615850e-47 |
| Msa0307740 | Msa1343600 | 0.828133 | 1.065036e-54 | -8.615850e-47 |
| Msa0320170 | Msa1343600 | 0.800936 | 1.140541e-48 | -8.615850e-47 |
| Msa0345050 | Msa1343600 | 0.819907 | 9.076697e-53 | -8.615850e-47 |
| Msa0357310 | Msa1343600 | 0.823545 | 1.307822e-53 | -8.615850e-47 |
| Msa1111910 | Msa1343600 | 0.823560 | 1.296889e-53 | -8.615850e-47 |
| Msa1115980 | Msa1343600 | 0.812003 | 5.275156e-51 | -8.615850e-47 |
| Msa1116090 | Msa1343600 | 0.803766 | 2.980410e-49 | -8.615850e-47 |
| Msa1130150 | Msa1343600 | -0.801581 | 8.417148e-49 | -8.615850e-47 |
| Msa1133750 | Msa1343600 | 0.826984 | 2.009160e-54 | -8.615850e-47 |
| Msa1136760 | Msa1343600 | 0.808075 | 3.701181e-50 | -8.615850e-47 |
| Msa1143260 | Msa1343600 | 0.811835 | 5.737991e-51 | -8.615850e-47 |
| Msa1154060 | Msa1343600 | 0.823837 | 1.116992e-53 | -8.615850e-47 |
| Msa1154320 | Msa1343600 | 0.867336 | 1.474987e-65 | -8.615850e-47 |
| Msa1167310 | Msa1343600 | 0.844738 | 6.278379e-59 | -8.615850e-47 |
| Msa1184680 | Msa1343600 | 0.858940 | 5.832039e-63 | -8.615850e-47 |
| Msa1185270 | Msa1343600 | 0.815946 | 7.123149e-52 | -8.615850e-47 |
| Msa1187480 | Msa1343600 | 0.816289 | 5.970353e-52 | -8.615850e-47 |
| Msa1193940 | Msa1343600 | 0.822174 | 2.727662e-53 | -8.615850e-47 |
| Msa1202470 | Msa1343600 | 0.809900 | 1.505161e-50 | -8.615850e-47 |
| Msa1202800 | Msa1343600 | 0.882891 | 7.122463e-71 | -8.615850e-47 |
| Msa1203650 | Msa1343600 | 0.832106 | 1.142155e-55 | -8.615850e-47 |
| Msa1211940 | Msa1343600 | 0.814346 | 1.614221e-51 | -8.615850e-47 |
| Msa1212080 | Msa1343600 | 0.807649 | 4.560126e-50 | -8.615850e-47 |
| Msa1212830 | Msa1343600 | 0.804418 | 2.181179e-49 | -8.615850e-47 |
| Msa1221270 | Msa1343600 | 0.807405 | 5.136464e-50 | -8.615850e-47 |
| Msa1223710 | Msa1343600 | 0.803309 | 3.706993e-49 | -8.615850e-47 |
| Msa0483970 | Msa1343600 | -0.800735 | 1.253353e-48 | -8.615850e-47 |
| Msa0492330 | Msa1343600 | -0.805438 | 1.334720e-49 | -8.615850e-47 |
| Msa0501080 | Msa1343600 | 0.819609 | 1.061672e-52 | -8.615850e-47 |
| Msa0512630 | Msa1343600 | 0.806713 | 7.196340e-50 | -8.615850e-47 |
| Msa0529110 | Msa1343600 | 0.800542 | 1.372453e-48 | -8.615850e-47 |
| Msa0531050 | Msa1343600 | 0.852633 | 4.062325e-61 | -8.615850e-47 |
| Msa0546590 | Msa1343600 | 0.803186 | 3.930509e-49 | -8.615850e-47 |
| Msa0548420 | Msa1343600 | 0.823594 | 1.273491e-53 | -8.615850e-47 |
| Msa0566280 | Msa1343600 | 0.867153 | 1.687808e-65 | -8.615850e-47 |
| Msa0567330 | Msa1343600 | 0.820913 | 5.333743e-53 | -8.615850e-47 |
| Msa0567570 | Msa1343600 | 0.803531 | 3.334717e-49 | -8.615850e-47 |
| Msa0576320 | Msa1343600 | 0.812038 | 5.182698e-51 | -8.615850e-47 |
| Msa0579220 | Msa1343600 | 0.803348 | 3.638442e-49 | -8.615850e-47 |
| Msa0580140 | Msa1343600 | 0.816365 | 5.740507e-52 | -8.615850e-47 |
| Msa0580890 | Msa1343600 | -0.804267 | 2.344466e-49 | -8.615850e-47 |
| Msa0588040 | Msa1343600 | 0.838521 | 2.737301e-57 | -8.615850e-47 |
| Msa0590620 | Msa1343600 | -0.826644 | 2.422487e-54 | -8.615850e-47 |
| Msa0596840 | Msa1343600 | 0.807739 | 4.363215e-50 | -8.615850e-47 |
| Msa0597180 | Msa1343600 | 0.811442 | 6.988028e-51 | -8.615850e-47 |
| Msa0597370 | Msa1343600 | -0.801074 | 1.068699e-48 | -8.615850e-47 |
| Msa0850640 | Msa1343600 | 0.826232 | 3.036713e-54 | -8.615850e-47 |
| Msa0862480 | Msa1343600 | -0.823566 | 1.292496e-53 | -8.615850e-47 |
| Msa0867660 | Msa1343600 | -0.806488 | 8.029886e-50 | -8.615850e-47 |
| Msa0873910 | Msa1343600 | 0.818375 | 2.025115e-52 | -8.615850e-47 |
| Msa0882780 | Msa1343600 | 0.807616 | 4.632454e-50 | -8.615850e-47 |
| Msa0901270 | Msa1343600 | 0.824371 | 8.370832e-54 | -8.615850e-47 |
| Msa0901290 | Msa1343600 | 0.821913 | 3.134785e-53 | -8.615850e-47 |
| Msa0905570 | Msa1343600 | 0.840741 | 7.245404e-58 | -8.615850e-47 |
| Msa0906660 | Msa1343600 | 0.815635 | 8.356869e-52 | -8.615850e-47 |
| Msa0907880 | Msa1343600 | 0.820981 | 5.146603e-53 | -8.615850e-47 |
| Msa0908260 | Msa1343600 | -0.807131 | 5.870347e-50 | -8.615850e-47 |
| Msa0908270 | Msa1343600 | -0.802836 | 4.644749e-49 | -8.615850e-47 |
| Msa0908470 | Msa1343600 | -0.802745 | 4.849421e-49 | -8.615850e-47 |
| Msa0908510 | Msa1343600 | -0.802775 | 4.780226e-49 | -8.615850e-47 |
| Msa0908630 | Msa1343600 | -0.804189 | 2.434698e-49 | -8.615850e-47 |
| Msa0908690 | Msa1343600 | -0.807960 | 3.914938e-50 | -8.615850e-47 |
| Msa0908700 | Msa1343600 | -0.802761 | 4.811818e-49 | -8.615850e-47 |
| Msa0909260 | Msa1343600 | 0.803355 | 3.626823e-49 | -8.615850e-47 |
| Msa0910170 | Msa1343600 | 0.812859 | 3.429454e-51 | -8.615850e-47 |
| Msa0924900 | Msa1343600 | -0.805718 | 1.166028e-49 | -8.615850e-47 |
| Msa0925940 | Msa1343600 | 0.805616 | 1.224764e-49 | -8.615850e-47 |
| Msa0964020 | Msa1343600 | 0.803549 | 3.306753e-49 | -8.615850e-47 |
| Msa0966580 | Msa1343600 | 0.803345 | 3.644505e-49 | -8.615850e-47 |
| Msa0972680 | Msa1343600 | 0.814026 | 1.899560e-51 | -8.615850e-47 |
| Msa0973080 | Msa1343600 | -0.811481 | 6.852840e-51 | -8.615850e-47 |
| Msa0974710 | Msa1343600 | 0.810179 | 1.310731e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343600 | MtrunA17_Chr5g0434631 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 1.62e-66 | 194 |
| Msa1343600 | MtrunA17_Chr7g0256821 | 73.134 | 67 | 18 | 0 | 30 | 96 | 54 | 120 | 7.90e-33 | 110 |
| Msa1343600 | MtrunA17_Chr5g0415001 | 53.333 | 90 | 39 | 2 | 9 | 96 | 4 | 92 | 1.33e-31 | 106 |
| Msa1343600 | MtrunA17_Chr6g0453241 | 52.577 | 97 | 37 | 1 | 9 | 96 | 11 | 107 | 3.04e-31 | 105 |
| Msa1343600 | MtrunA17_Chr7g0217311 | 51.042 | 96 | 38 | 1 | 10 | 96 | 14 | 109 | 4.08e-30 | 103 |
| Msa1343600 | MtrunA17_Chr3g0092361 | 52.688 | 93 | 40 | 1 | 8 | 96 | 11 | 103 | 1.28e-29 | 101 |
| Msa1343600 | MtrunA17_Chr5g0446671 | 73.333 | 60 | 16 | 0 | 37 | 96 | 6 | 65 | 3.63e-29 | 99.4 |
| Msa1343600 | MtrunA17_Chr3g0078781 | 71.667 | 60 | 17 | 0 | 37 | 96 | 6 | 65 | 8.73e-29 | 98.6 |
| Msa1343600 | MtrunA17_Chr5g0415091 | 61.667 | 60 | 23 | 0 | 37 | 96 | 29 | 88 | 2.22e-23 | 85.5 |
| Msa1343600 | MtrunA17_Chr5g0415111 | 48.276 | 87 | 38 | 1 | 10 | 96 | 4 | 83 | 9.83e-22 | 81.3 |
| Msa1343600 | MtrunA17_Chr5g0415051 | 56.667 | 60 | 26 | 0 | 37 | 96 | 12 | 71 | 3.16e-19 | 74.3 |
| Msa1343600 | MtrunA17_Chr1g0200531 | 42.105 | 95 | 51 | 1 | 6 | 96 | 6 | 100 | 2.21e-18 | 73.2 |
| Msa1343600 | MtrunA17_Chr1g0156601 | 40.816 | 98 | 49 | 2 | 8 | 96 | 4 | 101 | 8.53e-16 | 66.6 |
| Msa1343600 | MtrunA17_Chr1g0156621 | 49.315 | 73 | 36 | 1 | 25 | 96 | 28 | 100 | 1.48e-15 | 65.9 |
| Msa1343600 | MtrunA17_Chr8g0364311 | 44.872 | 78 | 42 | 1 | 20 | 96 | 35 | 112 | 7.94e-15 | 64.3 |
| Msa1343600 | MtrunA17_Chr3g0134511 | 50.847 | 59 | 29 | 0 | 38 | 96 | 27 | 85 | 1.33e-14 | 63.2 |
| Msa1343600 | MtrunA17_Chr1g0207611 | 46.667 | 60 | 32 | 0 | 37 | 96 | 31 | 90 | 5.97e-14 | 61.6 |
| Msa1343600 | MtrunA17_Chr3g0142671 | 39.362 | 94 | 52 | 2 | 8 | 96 | 10 | 103 | 1.12e-13 | 61.2 |
| Msa1343600 | MtrunA17_Chr4g0013021 | 43.939 | 66 | 36 | 1 | 8 | 72 | 3 | 68 | 1.89e-12 | 57.4 |
| Msa1343600 | MtrunA17_Chr1g0152851 | 41.379 | 87 | 51 | 0 | 10 | 96 | 5 | 91 | 1.39e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343600 | AT1G74670.1 | 58.696 | 92 | 34 | 1 | 9 | 96 | 10 | 101 | 5.65e-34 | 113 |
| Msa1343600 | AT3G02885.1 | 71.233 | 73 | 21 | 0 | 24 | 96 | 25 | 97 | 5.59e-29 | 100 |
| Msa1343600 | AT5G15230.1 | 51.546 | 97 | 38 | 2 | 9 | 96 | 10 | 106 | 6.59e-27 | 95.5 |
| Msa1343600 | AT2G30810.1 | 52.000 | 100 | 36 | 1 | 9 | 96 | 7 | 106 | 2.70e-26 | 94.0 |
| Msa1343600 | AT3G10185.1 | 64.000 | 75 | 27 | 0 | 22 | 96 | 48 | 122 | 6.93e-25 | 90.9 |
| Msa1343600 | AT5G15230.2 | 54.217 | 83 | 35 | 1 | 17 | 96 | 1 | 83 | 7.57e-25 | 89.4 |
| Msa1343600 | AT2G39540.1 | 37.931 | 87 | 47 | 1 | 10 | 96 | 8 | 87 | 8.84e-16 | 66.6 |
| Msa1343600 | AT1G10588.1 | 40.909 | 88 | 45 | 2 | 10 | 96 | 9 | 90 | 1.53e-14 | 63.5 |
| Msa1343600 | AT1G22690.1 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa1343600 | AT1G22690.2 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa1343600 | AT1G22690.3 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa1343600 | AT1G10588.2 | 39.773 | 88 | 45 | 2 | 10 | 96 | 9 | 89 | 5.50e-14 | 62.0 |
| Msa1343600 | AT4G09600.1 | 50.000 | 60 | 30 | 0 | 37 | 96 | 40 | 99 | 6.65e-14 | 62.0 |
| Msa1343600 | AT5G59845.1 | 36.364 | 88 | 49 | 2 | 10 | 96 | 8 | 89 | 7.62e-13 | 59.3 |
| Msa1343600 | AT2G18420.1 | 50.000 | 60 | 30 | 0 | 37 | 96 | 35 | 94 | 9.69e-13 | 58.9 |
| Msa1343600 | AT2G18420.2 | 50.000 | 60 | 30 | 0 | 37 | 96 | 11 | 70 | 1.11e-12 | 58.2 |
| Msa1343600 | AT5G14920.1 | 54.098 | 61 | 27 | 1 | 37 | 96 | 215 | 275 | 6.72e-12 | 59.7 |
| Msa1343600 | AT2G14900.1 | 34.118 | 85 | 45 | 1 | 23 | 96 | 24 | 108 | 2.40e-11 | 55.8 |
Find 37 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGGCATTCTTAAATTT+TGG | 0.170383 | tig0006470:-2378 | Msa1343600:three_prime_UTR |
| TGAGTATATGATATTATATT+TGG | 0.217941 | tig0006470:+2167 | Msa1343600:intergenic |
| GGTCATCTCTTTGCTTCTTT+TGG | 0.218438 | tig0006470:-3572 | Msa1343600:CDS |
| CTTTCAACCTTCATATATTA+TGG | 0.238802 | tig0006470:+2395 | Msa1343600:intergenic |
| TTAAGTGCTTAAGGGCATTT+TGG | 0.257598 | tig0006470:+2567 | Msa1343600:intergenic |
| GTGTTATTTGAATATCATAT+TGG | 0.285158 | tig0006470:-2195 | Msa1343600:three_prime_UTR |
| TGTTATTTGAATATCATATT+GGG | 0.286165 | tig0006470:-2194 | Msa1343600:three_prime_UTR |
| TGTGTTCCTCCTGGTGTATA+TGG | 0.309163 | tig0006470:-2642 | Msa1343600:CDS |
| TTGAAGAAATTAAGTGCTTA+AGG | 0.326452 | tig0006470:+2558 | Msa1343600:intergenic |
| GTGATCCTTGAACAGGCTTA+TGG | 0.330002 | tig0006470:-3381 | Msa1343600:intron |
| TGAAGAAATTAAGTGCTTAA+GGG | 0.385678 | tig0006470:+2559 | Msa1343600:intergenic |
| TCATGCCTTTGTGTTCCTCC+TGG | 0.416024 | tig0006470:-2651 | Msa1343600:CDS |
| ACTCACCTTTCATACAATAT+AGG | 0.416602 | tig0006470:+2466 | Msa1343600:intergenic |
| TTTGTCCTTGCTACAACAGC+TGG | 0.443536 | tig0006470:-2608 | Msa1343600:CDS |
| CTTCATATATTATGGTCAAA+AGG | 0.477709 | tig0006470:+2403 | Msa1343600:intergenic |
| TCATACCTATATTGTATGAA+AGG | 0.479328 | tig0006470:-2471 | Msa1343600:three_prime_UTR |
| CATGGTGAGTGTCATTGAAA+AGG | 0.482399 | tig0006470:+2437 | Msa1343600:intergenic |
| TGCTGCCATTGTTGTGAAAG+TGG | 0.523273 | tig0006470:+3618 | Msa1343600:intergenic |
| CATAATATATGAAGGTTGAA+AGG | 0.525325 | tig0006470:-2394 | Msa1343600:three_prime_UTR |
| TTGCAATGGCTCCATCTTGG+TGG | 0.538056 | tig0006470:-3593 | Msa1343600:CDS |
| CAAAAGGACAAGATCATACA+TGG | 0.556119 | tig0006470:+2419 | Msa1343600:intergenic |
| CAAAGAGATGACCACCAAGA+TGG | 0.560846 | tig0006470:+3582 | Msa1343600:intergenic |
| CGTGCAAAACTTCGTCCTCA+AGG | 0.561656 | tig0006470:-3357 | Msa1343600:intron |
| ACGTTGCAATGGCTCCATCT+TGG | 0.582831 | tig0006470:-3596 | Msa1343600:CDS |
| GTCTTCCAGCTGTTGTAGCA+AGG | 0.586689 | tig0006470:+2603 | Msa1343600:intergenic |
| TACATTCTCTAATGTAGCTG+AGG | 0.595669 | tig0006470:-3548 | Msa1343600:intron |
| GTTATTTGAATATCATATTG+GGG | 0.598241 | tig0006470:-2193 | Msa1343600:three_prime_UTR |
| TGCTTGTTGCCATATACACC+AGG | 0.601222 | tig0006470:+2633 | Msa1343600:intergenic |
| ACAATGGCAGCACGTTGCAA+TGG | 0.611244 | tig0006470:-3607 | Msa1343600:CDS |
| AAGTTCCACTTTCACAACAA+TGG | 0.613001 | tig0006470:-3623 | Msa1343600:exon |
| CTACAACAGCTGGAAGACAC+AGG | 0.616939 | tig0006470:-2598 | Msa1343600:CDS |
| GAGCAACGATATGTACACCT+TGG | 0.623615 | tig0006470:+2726 | Msa1343600:intergenic |
| AACAGCTGGAAGACACAGGA+AGG | 0.640099 | tig0006470:-2594 | Msa1343600:CDS |
| GTACTCTTGCAGTACTACAA+AGG | 0.645401 | tig0006470:+2244 | Msa1343600:intergenic |
| ATGAAACAGATTGTAAACCA+AGG | 0.669189 | tig0006470:-2743 | Msa1343600:intron |
| TTGTTGCCATATACACCAGG+AGG | 0.729916 | tig0006470:+2636 | Msa1343590:intergenic |
| ATACACCAGGAGGAACACAA+AGG | 0.753714 | tig0006470:+2646 | Msa1343590:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATAACTTGTTTAAAAAT+TGG | - | tig0006470:2740-2759 | Msa1343600:intron | 15.0% |
| !! | CCAAATTTGAAAAATAAATA+AGG | + | tig0006470:3342-3361 | Msa1343600:intergenic | 15.0% |
| !!! | CCTTATTTATTTTTCAAATT+TGG | - | tig0006470:3339-3358 | Msa1343600:intron | 15.0% |
| !!! | ACACAATAATTTTTTTTTGA+GGG | + | tig0006470:3520-3539 | Msa1343600:intergenic | 15.0% |
| !!! | TACACAATAATTTTTTTTTG+AGG | + | tig0006470:3521-3540 | Msa1343600:intergenic | 15.0% |
| !!! | TGTTATTTGAATATCATATT+GGG | - | tig0006470:3654-3673 | Msa1343600:five_prime_UTR | 15.0% |
| !! | TGAGTATATGATATTATATT+TGG | + | tig0006470:3684-3703 | Msa1343600:intergenic | 15.0% |
| !!! | AGTATAACTTGTTTAAAAAT+TGG | - | tig0006470:2740-2759 | Msa1343600:intron | 15.0% |
| !! | CCAAATTTGAAAAATAAATA+AGG | + | tig0006470:3342-3361 | Msa1343600:intergenic | 15.0% |
| !!! | CCTTATTTATTTTTCAAATT+TGG | - | tig0006470:3339-3358 | Msa1343600:intron | 15.0% |
| !!! | ACACAATAATTTTTTTTTGA+GGG | + | tig0006470:3520-3539 | Msa1343600:intergenic | 15.0% |
| !!! | TACACAATAATTTTTTTTTG+AGG | + | tig0006470:3521-3540 | Msa1343600:intergenic | 15.0% |
| !!! | TGTTATTTGAATATCATATT+GGG | - | tig0006470:3654-3673 | Msa1343600:five_prime_UTR | 15.0% |
| !! | TGAGTATATGATATTATATT+TGG | + | tig0006470:3684-3703 | Msa1343600:intergenic | 15.0% |
| !! | AAAACCATTTACTATATGAT+TGG | - | tig0006470:2346-2365 | Msa1343600:three_prime_UTR | 20.0% |
| !! | GTTCTAATATTTCAAAACTT+TGG | - | tig0006470:2437-2456 | Msa1343600:three_prime_UTR | 20.0% |
| !!! | TCCTCCATTAAAATAAATTT+TGG | - | tig0006470:2616-2635 | Msa1343600:CDS | 20.0% |
| !!! | ACTGCCAAAATTTATTTTAA+TGG | + | tig0006470:2623-2642 | Msa1343600:intergenic | 20.0% |
| !!! | TAAATTTTGGCAGTTTTATA+AGG | - | tig0006470:2629-2648 | Msa1343600:CDS | 20.0% |
| !!! | TTTTATAAGGAATTTTTCCT+TGG | - | tig0006470:2642-2661 | Msa1343600:CDS | 20.0% |
| !!! | CACAATAATTTTTTTTTGAG+GGG | + | tig0006470:3519-3538 | Msa1343600:intergenic | 20.0% |
| !! | AAAAAAATTATTGTGTACCT+TGG | - | tig0006470:3524-3543 | Msa1343600:intron | 20.0% |
| !!! | GTGTTATTTGAATATCATAT+TGG | - | tig0006470:3653-3672 | Msa1343600:five_prime_UTR | 20.0% |
| !! | GTTATTTGAATATCATATTG+GGG | - | tig0006470:3655-3674 | Msa1343600:five_prime_UTR | 20.0% |
| !! | AAAACCATTTACTATATGAT+TGG | - | tig0006470:2346-2365 | Msa1343600:three_prime_UTR | 20.0% |
| !! | GTTCTAATATTTCAAAACTT+TGG | - | tig0006470:2437-2456 | Msa1343600:three_prime_UTR | 20.0% |
| !!! | TCCTCCATTAAAATAAATTT+TGG | - | tig0006470:2616-2635 | Msa1343600:CDS | 20.0% |
| !!! | ACTGCCAAAATTTATTTTAA+TGG | + | tig0006470:2623-2642 | Msa1343600:intergenic | 20.0% |
| !!! | TAAATTTTGGCAGTTTTATA+AGG | - | tig0006470:2629-2648 | Msa1343600:CDS | 20.0% |
| !!! | TTTTATAAGGAATTTTTCCT+TGG | - | tig0006470:2642-2661 | Msa1343600:CDS | 20.0% |
| !!! | CACAATAATTTTTTTTTGAG+GGG | + | tig0006470:3519-3538 | Msa1343600:intergenic | 20.0% |
| !! | AAAAAAATTATTGTGTACCT+TGG | - | tig0006470:3524-3543 | Msa1343600:intron | 20.0% |
| !!! | GTGTTATTTGAATATCATAT+TGG | - | tig0006470:3653-3672 | Msa1343600:five_prime_UTR | 20.0% |
| !! | GTTATTTGAATATCATATTG+GGG | - | tig0006470:3655-3674 | Msa1343600:five_prime_UTR | 20.0% |
| ! | TGATCCAATCATATAGTAAA+TGG | + | tig0006470:2353-2372 | Msa1343600:intergenic | 25.0% |
| ! | AATTGCATATATATACCTTG+AGG | + | tig0006470:2509-2528 | Msa1343600:intergenic | 25.0% |
| !! | TTGTGTCTATAAGCAAATTT+TGG | - | tig0006470:2550-2569 | Msa1343600:three_prime_UTR | 25.0% |
| !! | TGTGTCTATAAGCAAATTTT+GGG | - | tig0006470:2551-2570 | Msa1343600:three_prime_UTR | 25.0% |
| !!! | GCCAAAATTTATTTTAATGG+AGG | + | tig0006470:2620-2639 | Msa1343600:intergenic | 25.0% |
| ! | TAAATTATTAATGTTGAGCG+AGG | + | tig0006470:2682-2701 | Msa1343600:intergenic | 25.0% |
| ! | TGTATAAGCAACCTAAAATT+TGG | - | tig0006470:2854-2873 | Msa1343600:intron | 25.0% |
| ! | GTATAAGCAACCTAAAATTT+GGG | - | tig0006470:2855-2874 | Msa1343600:intron | 25.0% |
| ! | TGAAGAAATTAAGTGCTTAA+GGG | + | tig0006470:3292-3311 | Msa1343600:intergenic | 25.0% |
| ! | TTGAAGAAATTAAGTGCTTA+AGG | + | tig0006470:3293-3312 | Msa1343600:intergenic | 25.0% |
| ! | TCATACCTATATTGTATGAA+AGG | - | tig0006470:3377-3396 | Msa1343600:intron | 25.0% |
| ! | CTTCATATATTATGGTCAAA+AGG | + | tig0006470:3448-3467 | Msa1343600:intergenic | 25.0% |
| !! | CTTTTGACCATAATATATGA+AGG | - | tig0006470:3446-3465 | Msa1343600:intron | 25.0% |
| ! | CTTTCAACCTTCATATATTA+TGG | + | tig0006470:3456-3475 | Msa1343600:intergenic | 25.0% |
| ! | CATAATATATGAAGGTTGAA+AGG | - | tig0006470:3454-3473 | Msa1343600:intron | 25.0% |
| !!! | TGAAAGGCATTCTTAAATTT+TGG | - | tig0006470:3470-3489 | Msa1343600:intron | 25.0% |
| ! | AACATTGAAAAACAAAACCA+AGG | + | tig0006470:3544-3563 | Msa1343600:intergenic | 25.0% |
| ! | TGATCCAATCATATAGTAAA+TGG | + | tig0006470:2353-2372 | Msa1343600:intergenic | 25.0% |
| ! | AATTGCATATATATACCTTG+AGG | + | tig0006470:2509-2528 | Msa1343600:intergenic | 25.0% |
| !! | TTGTGTCTATAAGCAAATTT+TGG | - | tig0006470:2550-2569 | Msa1343600:three_prime_UTR | 25.0% |
| !! | TGTGTCTATAAGCAAATTTT+GGG | - | tig0006470:2551-2570 | Msa1343600:three_prime_UTR | 25.0% |
| !!! | GCCAAAATTTATTTTAATGG+AGG | + | tig0006470:2620-2639 | Msa1343600:intergenic | 25.0% |
| ! | TAAATTATTAATGTTGAGCG+AGG | + | tig0006470:2682-2701 | Msa1343600:intergenic | 25.0% |
| ! | TGTATAAGCAACCTAAAATT+TGG | - | tig0006470:2854-2873 | Msa1343600:intron | 25.0% |
| ! | GTATAAGCAACCTAAAATTT+GGG | - | tig0006470:2855-2874 | Msa1343600:intron | 25.0% |
| ! | TGAAGAAATTAAGTGCTTAA+GGG | + | tig0006470:3292-3311 | Msa1343600:intergenic | 25.0% |
| ! | TTGAAGAAATTAAGTGCTTA+AGG | + | tig0006470:3293-3312 | Msa1343600:intergenic | 25.0% |
| ! | TCATACCTATATTGTATGAA+AGG | - | tig0006470:3377-3396 | Msa1343600:intron | 25.0% |
| ! | CTTCATATATTATGGTCAAA+AGG | + | tig0006470:3448-3467 | Msa1343600:intergenic | 25.0% |
| !! | CTTTTGACCATAATATATGA+AGG | - | tig0006470:3446-3465 | Msa1343600:intron | 25.0% |
| ! | CTTTCAACCTTCATATATTA+TGG | + | tig0006470:3456-3475 | Msa1343600:intergenic | 25.0% |
| ! | CATAATATATGAAGGTTGAA+AGG | - | tig0006470:3454-3473 | Msa1343600:intron | 25.0% |
| !!! | TGAAAGGCATTCTTAAATTT+TGG | - | tig0006470:3470-3489 | Msa1343600:intron | 25.0% |
| ! | AACATTGAAAAACAAAACCA+AGG | + | tig0006470:3544-3563 | Msa1343600:intergenic | 25.0% |
| ! | TAGTCCAAATCCCAAATTTT+AGG | + | tig0006470:2868-2887 | Msa1343600:intergenic | 30.0% |
| TTTCACCACTTATTCAAGAT+CGG | + | tig0006470:2931-2950 | Msa1343600:intergenic | 30.0% | |
| TTTCACCACTTATTCAAGAT+CGG | + | tig0006470:2931-2950 | Msa1343600:intergenic | 30.0% | |
| ATGAAACAGATTGTAAACCA+AGG | - | tig0006470:3105-3124 | Msa1343600:intron | 30.0% | |
| ACTCACCTTTCATACAATAT+AGG | + | tig0006470:3385-3404 | Msa1343600:intergenic | 30.0% | |
| ! | GTATCTAGTATTTTGTACCA+AGG | - | tig0006470:3492-3511 | Msa1343600:intron | 30.0% |
| ! | TAGTCCAAATCCCAAATTTT+AGG | + | tig0006470:2868-2887 | Msa1343600:intergenic | 30.0% |
| TTTCACCACTTATTCAAGAT+CGG | + | tig0006470:2931-2950 | Msa1343600:intergenic | 30.0% | |
| TTTCACCACTTATTCAAGAT+CGG | + | tig0006470:2931-2950 | Msa1343600:intergenic | 30.0% | |
| ATGAAACAGATTGTAAACCA+AGG | - | tig0006470:3105-3124 | Msa1343600:intron | 30.0% | |
| ACTCACCTTTCATACAATAT+AGG | + | tig0006470:3385-3404 | Msa1343600:intergenic | 30.0% | |
| ! | GTATCTAGTATTTTGTACCA+AGG | - | tig0006470:3492-3511 | Msa1343600:intron | 30.0% |
| AAGTTCCACTTTCACAACAA+TGG | - | tig0006470:2225-2244 | Msa1343600:three_prime_UTR | 35.0% | |
| TACATTCTCTAATGTAGCTG+AGG | - | tig0006470:2300-2319 | Msa1343600:three_prime_UTR | 35.0% | |
| ! | TTTTTGTGTGATCCTTGAAC+AGG | - | tig0006470:2460-2479 | Msa1343600:three_prime_UTR | 35.0% |
| !!! | AGGACTTTTTTTTACTGCCA+AGG | + | tig0006470:2662-2681 | Msa1343600:intergenic | 35.0% |
| ! | GCAACCTAAAATTTGGGATT+TGG | - | tig0006470:2861-2880 | Msa1343600:intron | 35.0% |
| ! | TTTTGGCAGAAAAACATGCA+TGG | + | tig0006470:3167-3186 | Msa1343600:intergenic | 35.0% |
| !!! | TTAAGTGCTTAAGGGCATTT+TGG | + | tig0006470:3284-3303 | Msa1343600:intergenic | 35.0% |
| CAAAAGGACAAGATCATACA+TGG | + | tig0006470:3432-3451 | Msa1343600:intergenic | 35.0% | |
| !!! | ATTTTTTTTTGAGGGGACCT+TGG | + | tig0006470:3512-3531 | Msa1343600:intergenic | 35.0% |
| AAGTTCCACTTTCACAACAA+TGG | - | tig0006470:2225-2244 | Msa1343600:three_prime_UTR | 35.0% | |
| TACATTCTCTAATGTAGCTG+AGG | - | tig0006470:2300-2319 | Msa1343600:three_prime_UTR | 35.0% | |
| ! | TTTTTGTGTGATCCTTGAAC+AGG | - | tig0006470:2460-2479 | Msa1343600:three_prime_UTR | 35.0% |
| !!! | AGGACTTTTTTTTACTGCCA+AGG | + | tig0006470:2662-2681 | Msa1343600:intergenic | 35.0% |
| ! | GCAACCTAAAATTTGGGATT+TGG | - | tig0006470:2861-2880 | Msa1343600:intron | 35.0% |
| ! | TTTTGGCAGAAAAACATGCA+TGG | + | tig0006470:3167-3186 | Msa1343600:intergenic | 35.0% |
| !!! | TTAAGTGCTTAAGGGCATTT+TGG | + | tig0006470:3284-3303 | Msa1343600:intergenic | 35.0% |
| CAAAAGGACAAGATCATACA+TGG | + | tig0006470:3432-3451 | Msa1343600:intergenic | 35.0% | |
| !!! | ATTTTTTTTTGAGGGGACCT+TGG | + | tig0006470:3512-3531 | Msa1343600:intergenic | 35.0% |
| !! | AGTGGAACTTTGCTTTTGAG+AGG | + | tig0006470:2215-2234 | None:intergenic | 40.0% |
| ! | GGTCATCTCTTTGCTTCTTT+TGG | - | tig0006470:2276-2295 | Msa1343600:three_prime_UTR | 40.0% |
| ! | GGCATGAAGCACAACATTTT+TGG | + | tig0006470:3184-3203 | Msa1343600:intergenic | 40.0% |
| ! | CATGGTGAGTGTCATTGAAA+AGG | + | tig0006470:3414-3433 | Msa1343600:intergenic | 40.0% |
| GTACTCTTGCAGTACTACAA+AGG | + | tig0006470:3607-3626 | Msa1343600:intergenic | 40.0% | |
| !! | AGTGGAACTTTGCTTTTGAG+AGG | + | tig0006470:2215-2234 | Msa1343600:intergenic | 40.0% |
| ! | GGTCATCTCTTTGCTTCTTT+TGG | - | tig0006470:2276-2295 | Msa1343600:three_prime_UTR | 40.0% |
| ! | GGCATGAAGCACAACATTTT+TGG | + | tig0006470:3184-3203 | Msa1343600:intergenic | 40.0% |
| ! | CATGGTGAGTGTCATTGAAA+AGG | + | tig0006470:3414-3433 | Msa1343600:intergenic | 40.0% |
| GTACTCTTGCAGTACTACAA+AGG | + | tig0006470:3607-3626 | Msa1343600:intergenic | 40.0% | |
| TGCTGCCATTGTTGTGAAAG+TGG | + | tig0006470:2233-2252 | Msa1343600:intergenic | 45.0% | |
| CAAAGAGATGACCACCAAGA+TGG | + | tig0006470:2269-2288 | Msa1343600:intergenic | 45.0% | |
| GTGATCCTTGAACAGGCTTA+TGG | - | tig0006470:2467-2486 | Msa1343600:three_prime_UTR | 45.0% | |
| TCTCACTATGTCACGCATCA+TGG | + | tig0006470:2814-2833 | Msa1343600:intergenic | 45.0% | |
| ! | TTTGGGATTTGGACTACACG+TGG | - | tig0006470:2872-2891 | Msa1343600:intron | 45.0% |
| GTCGTCCGATCTTGAATAAG+TGG | - | tig0006470:2923-2942 | Msa1343600:intron | 45.0% | |
| GTCGTCCGATCTTGAATAAG+TGG | - | tig0006470:2923-2942 | Msa1343600:intron | 45.0% | |
| GAGCAACGATATGTACACCT+TGG | + | tig0006470:3125-3144 | Msa1343600:intergenic | 45.0% | |
| ATACACCAGGAGGAACACAA+AGG | + | tig0006470:3205-3224 | Msa1343600:intergenic | 45.0% | |
| TGTGTTCCTCCTGGTGTATA+TGG | - | tig0006470:3206-3225 | Msa1343600:intron | 45.0% | |
| TTGTTGCCATATACACCAGG+AGG | + | tig0006470:3215-3234 | Msa1343600:intergenic | 45.0% | |
| ! | TGCTTGTTGCCATATACACC+AGG | + | tig0006470:3218-3237 | Msa1343600:intergenic | 45.0% |
| TTTGTCCTTGCTACAACAGC+TGG | - | tig0006470:3240-3259 | Msa1343600:intron | 45.0% | |
| TGCTGCCATTGTTGTGAAAG+TGG | + | tig0006470:2233-2252 | Msa1343600:intergenic | 45.0% | |
| CAAAGAGATGACCACCAAGA+TGG | + | tig0006470:2269-2288 | Msa1343600:intergenic | 45.0% | |
| GTGATCCTTGAACAGGCTTA+TGG | - | tig0006470:2467-2486 | Msa1343600:three_prime_UTR | 45.0% | |
| TCTCACTATGTCACGCATCA+TGG | + | tig0006470:2814-2833 | Msa1343600:intergenic | 45.0% | |
| ! | TTTGGGATTTGGACTACACG+TGG | - | tig0006470:2872-2891 | Msa1343600:intron | 45.0% |
| GTCGTCCGATCTTGAATAAG+TGG | - | tig0006470:2923-2942 | Msa1343600:intron | 45.0% | |
| GTCGTCCGATCTTGAATAAG+TGG | - | tig0006470:2923-2942 | Msa1343600:intron | 45.0% | |
| GAGCAACGATATGTACACCT+TGG | + | tig0006470:3125-3144 | Msa1343600:intergenic | 45.0% | |
| ATACACCAGGAGGAACACAA+AGG | + | tig0006470:3205-3224 | Msa1343600:intergenic | 45.0% | |
| TGTGTTCCTCCTGGTGTATA+TGG | - | tig0006470:3206-3225 | Msa1343600:intron | 45.0% | |
| TTGTTGCCATATACACCAGG+AGG | + | tig0006470:3215-3234 | Msa1343600:intergenic | 45.0% | |
| ! | TGCTTGTTGCCATATACACC+AGG | + | tig0006470:3218-3237 | Msa1343600:intergenic | 45.0% |
| TTTGTCCTTGCTACAACAGC+TGG | - | tig0006470:3240-3259 | Msa1343600:intron | 45.0% | |
| ACAATGGCAGCACGTTGCAA+TGG | - | tig0006470:2241-2260 | Msa1343600:three_prime_UTR | 50.0% | |
| ACGTTGCAATGGCTCCATCT+TGG | - | tig0006470:2252-2271 | Msa1343600:three_prime_UTR | 50.0% | |
| TTGCAATGGCTCCATCTTGG+TGG | - | tig0006470:2255-2274 | Msa1343600:three_prime_UTR | 50.0% | |
| CACGTCCATAAGCCTGTTCA+AGG | + | tig0006470:2475-2494 | Msa1343600:intergenic | 50.0% | |
| CGTGCAAAACTTCGTCCTCA+AGG | - | tig0006470:2491-2510 | Msa1343600:three_prime_UTR | 50.0% | |
| TCATGCCTTTGTGTTCCTCC+TGG | - | tig0006470:3197-3216 | Msa1343600:intron | 50.0% | |
| GTCTTCCAGCTGTTGTAGCA+AGG | + | tig0006470:3248-3267 | Msa1343600:intergenic | 50.0% | |
| CTACAACAGCTGGAAGACAC+AGG | - | tig0006470:3250-3269 | Msa1343600:intron | 50.0% | |
| AACAGCTGGAAGACACAGGA+AGG | - | tig0006470:3254-3273 | Msa1343600:intron | 50.0% | |
| ACAATGGCAGCACGTTGCAA+TGG | - | tig0006470:2241-2260 | Msa1343600:three_prime_UTR | 50.0% | |
| ACGTTGCAATGGCTCCATCT+TGG | - | tig0006470:2252-2271 | Msa1343600:three_prime_UTR | 50.0% | |
| TTGCAATGGCTCCATCTTGG+TGG | - | tig0006470:2255-2274 | Msa1343600:three_prime_UTR | 50.0% | |
| CACGTCCATAAGCCTGTTCA+AGG | + | tig0006470:2475-2494 | Msa1343600:intergenic | 50.0% | |
| CGTGCAAAACTTCGTCCTCA+AGG | - | tig0006470:2491-2510 | Msa1343600:three_prime_UTR | 50.0% | |
| TCATGCCTTTGTGTTCCTCC+TGG | - | tig0006470:3197-3216 | Msa1343600:intron | 50.0% | |
| GTCTTCCAGCTGTTGTAGCA+AGG | + | tig0006470:3248-3267 | Msa1343600:intergenic | 50.0% | |
| CTACAACAGCTGGAAGACAC+AGG | - | tig0006470:3250-3269 | Msa1343600:intron | 50.0% | |
| AACAGCTGGAAGACACAGGA+AGG | - | tig0006470:3254-3273 | Msa1343600:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0006470 | gene | 2158 | 3712 | 2158 | ID=Msa1343600;Name=Msa1343600 |
| tig0006470 | mRNA | 2158 | 3712 | 2158 | ID=Msa1343600-mRNA-1;Parent=Msa1343600;Name=Msa1343600-mRNA-1;_AED=0.01;_eAED=0.01;_QI=86|1|1|1|0.5|0.33|3|417|96 |
| tig0006470 | exon | 2158 | 2756 | 2158 | ID=Msa1343600-mRNA-1:exon:4221;Parent=Msa1343600-mRNA-1 |
| tig0006470 | exon | 3358 | 3388 | 3358 | ID=Msa1343600-mRNA-1:exon:4220;Parent=Msa1343600-mRNA-1 |
| tig0006470 | exon | 3549 | 3712 | 3549 | ID=Msa1343600-mRNA-1:exon:4219;Parent=Msa1343600-mRNA-1 |
| tig0006470 | five_prime_UTR | 3627 | 3712 | 3627 | ID=Msa1343600-mRNA-1:five_prime_utr;Parent=Msa1343600-mRNA-1 |
| tig0006470 | CDS | 3549 | 3626 | 3549 | ID=Msa1343600-mRNA-1:cds;Parent=Msa1343600-mRNA-1 |
| tig0006470 | CDS | 3358 | 3388 | 3358 | ID=Msa1343600-mRNA-1:cds;Parent=Msa1343600-mRNA-1 |
| tig0006470 | CDS | 2575 | 2756 | 2575 | ID=Msa1343600-mRNA-1:cds;Parent=Msa1343600-mRNA-1 |
| tig0006470 | three_prime_UTR | 2158 | 2574 | 2158 | ID=Msa1343600-mRNA-1:three_prime_utr;Parent=Msa1343600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
