Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0778570 | XP_013454210.2 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 1.76e-62 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0778570 | sp|P47926|RSI1_SOLLC | 80.435 | 92 | 15 | 2 | 6 | 96 | 7 | 96 | 2.35e-48 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0778570 | A0A396HU88 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 8.43e-63 | 194 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006480 | Msa0778570 | 0.812280 | 4.591047e-51 | -8.615850e-47 |
| Msa0011440 | Msa0778570 | -0.805960 | 1.037030e-49 | -8.615850e-47 |
| Msa0015950 | Msa0778570 | 0.814000 | 1.925093e-51 | -8.615850e-47 |
| Msa0015960 | Msa0778570 | 0.811848 | 5.700537e-51 | -8.615850e-47 |
| Msa0016070 | Msa0778570 | 0.812032 | 5.198330e-51 | -8.615850e-47 |
| Msa0016080 | Msa0778570 | 0.821956 | 3.064416e-53 | -8.615850e-47 |
| Msa0025560 | Msa0778570 | 0.808672 | 2.760235e-50 | -8.615850e-47 |
| Msa0025570 | Msa0778570 | 0.814833 | 1.259344e-51 | -8.615850e-47 |
| Msa0028690 | Msa0778570 | 0.828424 | 9.060295e-55 | -8.615850e-47 |
| Msa0047660 | Msa0778570 | -0.808287 | 3.336239e-50 | -8.615850e-47 |
| Msa0060410 | Msa0778570 | 0.829068 | 6.329543e-55 | -8.615850e-47 |
| Msa0060670 | Msa0778570 | 0.804908 | 1.723654e-49 | -8.615850e-47 |
| Msa0063940 | Msa0778570 | 0.803861 | 2.848518e-49 | -8.615850e-47 |
| Msa0065670 | Msa0778570 | -0.801587 | 8.393804e-49 | -8.615850e-47 |
| Msa0072180 | Msa0778570 | 0.808558 | 2.919643e-50 | -8.615850e-47 |
| Msa0073110 | Msa0778570 | 0.811790 | 5.869893e-51 | -8.615850e-47 |
| Msa0090870 | Msa0778570 | 0.802465 | 5.538368e-49 | -8.615850e-47 |
| Msa0095890 | Msa0778570 | -0.806971 | 6.346825e-50 | -8.615850e-47 |
| Msa0095940 | Msa0778570 | 0.802668 | 5.030843e-49 | -8.615850e-47 |
| Msa0100540 | Msa0778570 | 0.803457 | 3.454654e-49 | -8.615850e-47 |
| Msa0101530 | Msa0778570 | 0.822793 | 1.958725e-53 | -8.615850e-47 |
| Msa0119240 | Msa0778570 | 0.813073 | 3.078058e-51 | -8.615850e-47 |
| Msa0603310 | Msa0778570 | 0.843392 | 1.441705e-58 | -8.615850e-47 |
| Msa0628200 | Msa0778570 | 0.817555 | 3.104129e-52 | -8.615850e-47 |
| Msa0637590 | Msa0778570 | 0.807642 | 4.575053e-50 | -8.615850e-47 |
| Msa0637700 | Msa0778570 | 0.813010 | 3.177750e-51 | -8.615850e-47 |
| Msa0644330 | Msa0778570 | 0.801429 | 9.041798e-49 | -8.615850e-47 |
| Msa0644340 | Msa0778570 | 0.813961 | 1.963008e-51 | -8.615850e-47 |
| Msa0657710 | Msa0778570 | 0.848224 | 7.022230e-60 | -8.615850e-47 |
| Msa0657720 | Msa0778570 | 0.831373 | 1.731689e-55 | -8.615850e-47 |
| Msa0661410 | Msa0778570 | 0.816366 | 5.737671e-52 | -8.615850e-47 |
| Msa0661420 | Msa0778570 | 0.811790 | 5.868897e-51 | -8.615850e-47 |
| Msa0675630 | Msa0778570 | 0.804311 | 2.295676e-49 | -8.615850e-47 |
| Msa0682110 | Msa0778570 | 0.843852 | 1.085806e-58 | -8.615850e-47 |
| Msa0682160 | Msa0778570 | 0.833579 | 4.916805e-56 | -8.615850e-47 |
| Msa0682910 | Msa0778570 | 0.803920 | 2.768976e-49 | -8.615850e-47 |
| Msa0702790 | Msa0778570 | 0.825321 | 4.995139e-54 | -8.615850e-47 |
| Msa0702800 | Msa0778570 | 0.843733 | 1.168176e-58 | -8.615850e-47 |
| Msa0712880 | Msa0778570 | 0.815571 | 8.634415e-52 | -8.615850e-47 |
| Msa0719750 | Msa0778570 | 0.804534 | 2.063170e-49 | -8.615850e-47 |
| Msa0731590 | Msa0778570 | 0.804330 | 2.275229e-49 | -8.615850e-47 |
| Msa0736920 | Msa0778570 | 0.995323 | 3.874523e-215 | -8.615850e-47 |
| Msa0742370 | Msa0778570 | -0.822152 | 2.760453e-53 | -8.615850e-47 |
| Msa0744640 | Msa0778570 | 0.835792 | 1.364951e-56 | -8.615850e-47 |
| Msa0758990 | Msa0778570 | 0.809535 | 1.803204e-50 | -8.615850e-47 |
| Msa0765060 | Msa0778570 | 0.814171 | 1.764377e-51 | -8.615850e-47 |
| Msa0765090 | Msa0778570 | 0.807073 | 6.038737e-50 | -8.615850e-47 |
| Msa0769540 | Msa0778570 | 0.803675 | 3.113371e-49 | -8.615850e-47 |
| Msa0771790 | Msa0778570 | 0.805706 | 1.172722e-49 | -8.615850e-47 |
| Msa0773030 | Msa0778570 | 0.819525 | 1.109352e-52 | -8.615850e-47 |
| Msa0778570 | Msa0800120 | 0.839763 | 1.304251e-57 | -8.615850e-47 |
| Msa0778570 | Msa0800150 | 0.832152 | 1.112483e-55 | -8.615850e-47 |
| Msa0778570 | Msa0800180 | 0.844008 | 9.864219e-59 | -8.615850e-47 |
| Msa0778570 | Msa0802760 | 0.801700 | 7.957979e-49 | -8.615850e-47 |
| Msa0778570 | Msa0810330 | 0.836112 | 1.132542e-56 | -8.615850e-47 |
| Msa0778570 | Msa0812720 | 0.816112 | 6.540879e-52 | -8.615850e-47 |
| Msa0778570 | Msa0815940 | 0.992728 | 4.550084e-195 | -8.615850e-47 |
| Msa0778570 | Msa0823480 | -0.800823 | 1.203082e-48 | -8.615850e-47 |
| Msa0778570 | Msa0828950 | 0.833875 | 4.148572e-56 | -8.615850e-47 |
| Msa0778570 | Msa0828960 | 0.845144 | 4.876500e-59 | -8.615850e-47 |
| Msa0778570 | Msa0829250 | -0.801307 | 9.577728e-49 | -8.615850e-47 |
| Msa0778570 | Msa0833200 | -0.811454 | 6.945956e-51 | -8.615850e-47 |
| Msa0778570 | Msa0833270 | 0.809844 | 1.548013e-50 | -8.615850e-47 |
| Msa0778570 | Msa0838210 | 0.822892 | 1.856993e-53 | -8.615850e-47 |
| Msa0778570 | Msa0841730 | 0.835534 | 1.586476e-56 | -8.615850e-47 |
| Msa0778570 | Msa0850640 | 0.827687 | 1.363625e-54 | -8.615850e-47 |
| Msa0778570 | Msa0862480 | -0.819362 | 1.208401e-52 | -8.615850e-47 |
| Msa0778570 | Msa0867660 | -0.807946 | 3.941818e-50 | -8.615850e-47 |
| Msa0778570 | Msa0870510 | 0.802145 | 6.446590e-49 | -8.615850e-47 |
| Msa0778570 | Msa0873910 | 0.822952 | 1.798083e-53 | -8.615850e-47 |
| Msa0778570 | Msa0882780 | 0.807139 | 5.849255e-50 | -8.615850e-47 |
| Msa0778570 | Msa0901270 | 0.824455 | 7.997902e-54 | -8.615850e-47 |
| Msa0778570 | Msa0901290 | 0.821223 | 4.527197e-53 | -8.615850e-47 |
| Msa0778570 | Msa0905570 | 0.843974 | 1.006845e-58 | -8.615850e-47 |
| Msa0778570 | Msa0906660 | 0.820736 | 5.859380e-53 | -8.615850e-47 |
| Msa0778570 | Msa0907880 | 0.822743 | 2.011664e-53 | -8.615850e-47 |
| Msa0778570 | Msa0908260 | -0.808017 | 3.807886e-50 | -8.615850e-47 |
| Msa0778570 | Msa0908270 | -0.801961 | 7.033191e-49 | -8.615850e-47 |
| Msa0778570 | Msa0908470 | -0.805424 | 1.344237e-49 | -8.615850e-47 |
| Msa0778570 | Msa0908510 | -0.804926 | 1.708626e-49 | -8.615850e-47 |
| Msa0778570 | Msa0908630 | -0.805868 | 1.084573e-49 | -8.615850e-47 |
| Msa0778570 | Msa0908690 | -0.807774 | 4.288087e-50 | -8.615850e-47 |
| Msa0778570 | Msa0908700 | -0.804744 | 1.864440e-49 | -8.615850e-47 |
| Msa0778570 | Msa0910170 | 0.812702 | 3.712056e-51 | -8.615850e-47 |
| Msa0778570 | Msa0924900 | -0.808062 | 3.724172e-50 | -8.615850e-47 |
| Msa0778570 | Msa0925940 | 0.815957 | 7.081983e-52 | -8.615850e-47 |
| Msa0778570 | Msa0930270 | 0.805608 | 1.229823e-49 | -8.615850e-47 |
| Msa0778570 | Msa0966580 | 0.811802 | 5.833402e-51 | -8.615850e-47 |
| Msa0778570 | Msa0972680 | 0.809337 | 1.988755e-50 | -8.615850e-47 |
| Msa0778570 | Msa0973080 | -0.811084 | 8.355528e-51 | -8.615850e-47 |
| Msa0778570 | Msa0974710 | 0.811673 | 6.224205e-51 | -8.615850e-47 |
| Msa0778570 | Msa0983600 | -0.811440 | 6.994265e-51 | -8.615850e-47 |
| Msa0778570 | Msa0983610 | -0.810302 | 1.233467e-50 | -8.615850e-47 |
| Msa0778570 | Msa1001120 | 0.842330 | 2.761954e-58 | -8.615850e-47 |
| Msa0778570 | Msa1015360 | 0.827789 | 1.288544e-54 | -8.615850e-47 |
| Msa0778570 | Msa1019420 | 0.845871 | 3.099639e-59 | -8.615850e-47 |
| Msa0778570 | Msa1029860 | 0.812821 | 3.495169e-51 | -8.615850e-47 |
| Msa0778570 | Msa1034950 | 0.805615 | 1.225517e-49 | -8.615850e-47 |
| Msa0778570 | Msa1035050 | 0.800308 | 1.531971e-48 | -8.615850e-47 |
| Msa0778570 | Msa1035190 | 0.815565 | 8.663366e-52 | -8.615850e-47 |
| Msa0778570 | Msa1075010 | 0.806441 | 8.214954e-50 | -8.615850e-47 |
| Msa0778570 | Msa1075090 | 0.807493 | 4.921734e-50 | -8.615850e-47 |
| Msa0778570 | Msa1080130 | 0.813150 | 2.961196e-51 | -8.615850e-47 |
| Msa0778570 | Msa1086490 | -0.805665 | 1.196002e-49 | -8.615850e-47 |
| Msa0778570 | Msa1086760 | -0.803958 | 2.719320e-49 | -8.615850e-47 |
| Msa0778570 | Msa1086770 | -0.805553 | 1.262976e-49 | -8.615850e-47 |
| Msa0778570 | Msa1086940 | -0.806864 | 6.686545e-50 | -8.615850e-47 |
| Msa0778570 | Msa1087070 | -0.808670 | 2.763042e-50 | -8.615850e-47 |
| Msa0778570 | Msa1087090 | -0.809555 | 1.785670e-50 | -8.615850e-47 |
| Msa0778570 | Msa1089990 | 0.814935 | 1.195619e-51 | -8.615850e-47 |
| Msa0778570 | Msa1092310 | 0.867146 | 1.696312e-65 | -8.615850e-47 |
| Msa0778570 | Msa1111910 | 0.816416 | 5.592254e-52 | -8.615850e-47 |
| Msa0778570 | Msa1115980 | 0.808057 | 3.733282e-50 | -8.615850e-47 |
| Msa0778570 | Msa1116090 | 0.805753 | 1.146460e-49 | -8.615850e-47 |
| Msa0778570 | Msa1130150 | -0.802885 | 4.536878e-49 | -8.615850e-47 |
| Msa0778570 | Msa1133700 | 0.810903 | 9.145471e-51 | -8.615850e-47 |
| Msa0778570 | Msa1133750 | 0.821477 | 3.954570e-53 | -8.615850e-47 |
| Msa0778570 | Msa1136760 | 0.818424 | 1.974551e-52 | -8.615850e-47 |
| Msa0778570 | Msa1143260 | 0.812823 | 3.491684e-51 | -8.615850e-47 |
| Msa0778570 | Msa1154060 | 0.820081 | 8.282081e-53 | -8.615850e-47 |
| Msa0778570 | Msa1154320 | 0.862915 | 3.614201e-64 | -8.615850e-47 |
| Msa0778570 | Msa1167310 | 0.849142 | 3.910483e-60 | -8.615850e-47 |
| Msa0778570 | Msa1184680 | 0.849091 | 4.038765e-60 | -8.615850e-47 |
| Msa0778570 | Msa1185270 | 0.819080 | 1.401565e-52 | -8.615850e-47 |
| Msa0778570 | Msa1187480 | 0.820188 | 7.828553e-53 | -8.615850e-47 |
| Msa0778570 | Msa1193940 | 0.820288 | 7.423672e-53 | -8.615850e-47 |
| Msa0778570 | Msa1202110 | 0.801051 | 1.080586e-48 | -8.615850e-47 |
| Msa0778570 | Msa1202800 | 0.879532 | 1.153823e-69 | -8.615850e-47 |
| Msa0778570 | Msa1203650 | 0.826053 | 3.350864e-54 | -8.615850e-47 |
| Msa0778570 | Msa1211940 | 0.813283 | 2.768793e-51 | -8.615850e-47 |
| Msa0778570 | Msa1212080 | 0.803903 | 2.791234e-49 | -8.615850e-47 |
| Msa0778570 | Msa1212830 | 0.800932 | 1.142645e-48 | -8.615850e-47 |
| Msa0778570 | Msa1221270 | 0.805277 | 1.442464e-49 | -8.615850e-47 |
| Msa0778570 | Msa1238600 | 0.841085 | 5.883518e-58 | -8.615850e-47 |
| Msa0778570 | Msa1238660 | 0.804991 | 1.655820e-49 | -8.615850e-47 |
| Msa0778570 | Msa1239210 | 0.816268 | 6.037499e-52 | -8.615850e-47 |
| Msa0778570 | Msa1241740 | 0.800386 | 1.476473e-48 | -8.615850e-47 |
| Msa0778570 | Msa1248060 | 0.837084 | 6.402336e-57 | -8.615850e-47 |
| Msa0778570 | Msa1254910 | 0.820297 | 7.390824e-53 | -8.615850e-47 |
| Msa0778570 | Msa1255210 | 0.871768 | 5.314090e-67 | -8.615850e-47 |
| Msa0778570 | Msa1268360 | 0.845646 | 3.566469e-59 | -8.615850e-47 |
| Msa0778570 | Msa1268390 | 0.862073 | 6.558265e-64 | -8.615850e-47 |
| Msa0778570 | Msa1268420 | 0.843925 | 1.038289e-58 | -8.615850e-47 |
| Msa0778570 | Msa1269200 | 0.846917 | 1.606775e-59 | -8.615850e-47 |
| Msa0778570 | Msa1273320 | 0.804912 | 1.720282e-49 | -8.615850e-47 |
| Msa0778570 | Msa1283930 | 0.805035 | 1.621032e-49 | -8.615850e-47 |
| Msa0778570 | Msa1284020 | 0.805524 | 1.280888e-49 | -8.615850e-47 |
| Msa0778570 | Msa1289050 | 0.820280 | 7.455151e-53 | -8.615850e-47 |
| Msa0778570 | Msa1289090 | 0.828271 | 9.863871e-55 | -8.615850e-47 |
| Msa0778570 | Msa1295650 | 0.870394 | 1.508958e-66 | -8.615850e-47 |
| Msa0778570 | Msa1301280 | -0.820969 | 5.177924e-53 | -8.615850e-47 |
| Msa0778570 | Msa1322960 | 0.801848 | 7.418336e-49 | -8.615850e-47 |
| Msa0778570 | Msa1328430 | 0.800418 | 1.454943e-48 | -8.615850e-47 |
| Msa0778570 | Msa1331570 | -0.801791 | 7.620009e-49 | -8.615850e-47 |
| Msa0778570 | Msa1336020 | 0.818674 | 1.732551e-52 | -8.615850e-47 |
| Msa0778570 | Msa1343600 | 0.995128 | 2.816176e-213 | -8.615850e-47 |
| Msa0778570 | Msa1354360 | -0.806577 | 7.689082e-50 | -8.615850e-47 |
| Msa0778570 | Msa1354400 | -0.810390 | 1.180218e-50 | -8.615850e-47 |
| Msa0778570 | Msa1354520 | -0.810864 | 9.323417e-51 | -8.615850e-47 |
| Msa0778570 | Msa1354530 | -0.808908 | 2.458179e-50 | -8.615850e-47 |
| Msa0778570 | Msa1354650 | -0.810913 | 9.100705e-51 | -8.615850e-47 |
| Msa0778570 | Msa1354660 | -0.811073 | 8.402664e-51 | -8.615850e-47 |
| Msa0778570 | Msa1354780 | -0.806329 | 8.673931e-50 | -8.615850e-47 |
| Msa0778570 | Msa1354790 | -0.811950 | 5.416943e-51 | -8.615850e-47 |
| Msa0778570 | Msa1354960 | -0.814489 | 1.500855e-51 | -8.615850e-47 |
| Msa0778570 | Msa1365990 | -0.805432 | 1.338934e-49 | -8.615850e-47 |
| Msa0778570 | Msa1366020 | -0.808841 | 2.540368e-50 | -8.615850e-47 |
| Msa0778570 | Msa1366030 | -0.811376 | 7.222613e-51 | -8.615850e-47 |
| Msa0778570 | Msa1366060 | -0.810535 | 1.098190e-50 | -8.615850e-47 |
| Msa0778570 | Msa1368260 | -0.812482 | 4.147123e-51 | -8.615850e-47 |
| Msa0778570 | Msa1384700 | 0.834554 | 2.802391e-56 | -8.615850e-47 |
| Msa0778570 | Msa1385360 | -0.805418 | 1.347511e-49 | -8.615850e-47 |
| Msa0778570 | Msa1385390 | -0.810525 | 1.103709e-50 | -8.615850e-47 |
| Msa0778570 | Msa1386830 | 0.807077 | 6.028817e-50 | -8.615850e-47 |
| Msa0778570 | Msa1391130 | -0.810450 | 1.145987e-50 | -8.615850e-47 |
| Msa0778570 | Msa1391140 | -0.811710 | 6.111373e-51 | -8.615850e-47 |
| Msa0778570 | Msa1391260 | -0.804848 | 1.773531e-49 | -8.615850e-47 |
| Msa0778570 | Msa1404050 | 0.810277 | 1.248955e-50 | -8.615850e-47 |
| Msa0778570 | Msa1407810 | 0.808615 | 2.838536e-50 | -8.615850e-47 |
| Msa0778570 | Msa1408390 | 0.806501 | 7.976223e-50 | -8.615850e-47 |
| Msa0778570 | Msa1412330 | -0.809545 | 1.794592e-50 | -8.615850e-47 |
| Msa0778570 | Msa1413450 | 0.804358 | 2.245176e-49 | -8.615850e-47 |
| Msa0778570 | Msa1422860 | 0.831486 | 1.624452e-55 | -8.615850e-47 |
| Msa0778570 | Msa1430950 | 0.823305 | 1.488028e-53 | -8.615850e-47 |
| Msa0778570 | Msa1433040 | 0.842087 | 3.202375e-58 | -8.615850e-47 |
| Msa0778570 | Msa1433360 | 0.824765 | 6.758864e-54 | -8.615850e-47 |
| Msa0778570 | Msa1437780 | 0.809869 | 1.528848e-50 | -8.615850e-47 |
| Msa0778570 | Msa1445530 | 0.810921 | 9.062074e-51 | -8.615850e-47 |
| Msa0778570 | Msa1455200 | 0.816469 | 5.442120e-52 | -8.615850e-47 |
| Msa0121300 | Msa0778570 | 0.821061 | 4.931367e-53 | -8.615850e-47 |
| Msa0143500 | Msa0778570 | 0.808211 | 3.462659e-50 | -8.615850e-47 |
| Msa0151510 | Msa0778570 | -0.801209 | 1.003170e-48 | -8.615850e-47 |
| Msa0151660 | Msa0778570 | 0.822500 | 2.291013e-53 | -8.615850e-47 |
| Msa0161230 | Msa0778570 | 0.800173 | 1.631459e-48 | -8.615850e-47 |
| Msa0163690 | Msa0778570 | 0.806339 | 8.631171e-50 | -8.615850e-47 |
| Msa0166190 | Msa0778570 | 0.826165 | 3.151451e-54 | -8.615850e-47 |
| Msa0168750 | Msa0778570 | 0.803745 | 3.011138e-49 | -8.615850e-47 |
| Msa0185040 | Msa0778570 | 0.813653 | 2.295902e-51 | -8.615850e-47 |
| Msa0187540 | Msa0778570 | 0.810396 | 1.176897e-50 | -8.615850e-47 |
| Msa0189990 | Msa0778570 | 0.804938 | 1.698627e-49 | -8.615850e-47 |
| Msa0198990 | Msa0778570 | 0.805702 | 1.175310e-49 | -8.615850e-47 |
| Msa0210610 | Msa0778570 | 0.806443 | 8.204201e-50 | -8.615850e-47 |
| Msa0217060 | Msa0778570 | 0.826403 | 2.764908e-54 | -8.615850e-47 |
| Msa0218500 | Msa0778570 | 0.846352 | 2.292136e-59 | -8.615850e-47 |
| Msa0218610 | Msa0778570 | 0.813445 | 2.550421e-51 | -8.615850e-47 |
| Msa0224870 | Msa0778570 | 0.823598 | 1.270777e-53 | -8.615850e-47 |
| Msa0225790 | Msa0778570 | -0.803095 | 4.104567e-49 | -8.615850e-47 |
| Msa0226260 | Msa0778570 | 0.801512 | 8.696276e-49 | -8.615850e-47 |
| Msa0234150 | Msa0778570 | 0.811598 | 6.462279e-51 | -8.615850e-47 |
| Msa0365210 | Msa0778570 | 0.809671 | 1.686338e-50 | -8.615850e-47 |
| Msa0394500 | Msa0778570 | 0.805585 | 1.243212e-49 | -8.615850e-47 |
| Msa0405460 | Msa0778570 | -0.802956 | 4.385806e-49 | -8.615850e-47 |
| Msa0405550 | Msa0778570 | -0.802305 | 5.974171e-49 | -8.615850e-47 |
| Msa0415100 | Msa0778570 | 0.802552 | 5.314774e-49 | -8.615850e-47 |
| Msa0415640 | Msa0778570 | 0.808800 | 2.591779e-50 | -8.615850e-47 |
| Msa0420610 | Msa0778570 | 0.801106 | 1.052875e-48 | -8.615850e-47 |
| Msa0428270 | Msa0778570 | -0.806659 | 7.389037e-50 | -8.615850e-47 |
| Msa0449500 | Msa0778570 | 0.811384 | 7.190840e-51 | -8.615850e-47 |
| Msa0480900 | Msa0778570 | -0.800451 | 1.432489e-48 | -8.615850e-47 |
| Msa0481630 | Msa0778570 | 0.808255 | 3.388212e-50 | -8.615850e-47 |
| Msa0241750 | Msa0778570 | 0.815482 | 9.037319e-52 | -8.615850e-47 |
| Msa0256920 | Msa0778570 | 0.863217 | 2.914756e-64 | -8.615850e-47 |
| Msa0257760 | Msa0778570 | 0.814705 | 1.344937e-51 | -8.615850e-47 |
| Msa0258260 | Msa0778570 | 0.822343 | 2.491592e-53 | -8.615850e-47 |
| Msa0260580 | Msa0778570 | -0.802254 | 6.120426e-49 | -8.615850e-47 |
| Msa0269170 | Msa0778570 | -0.815013 | 1.148739e-51 | -8.615850e-47 |
| Msa0282960 | Msa0778570 | 0.845959 | 2.932618e-59 | -8.615850e-47 |
| Msa0285890 | Msa0778570 | 0.801159 | 1.027157e-48 | -8.615850e-47 |
| Msa0286360 | Msa0778570 | 0.808954 | 2.403143e-50 | -8.615850e-47 |
| Msa0287480 | Msa0778570 | 0.815426 | 9.302638e-52 | -8.615850e-47 |
| Msa0297340 | Msa0778570 | 0.823771 | 1.157630e-53 | -8.615850e-47 |
| Msa0298000 | Msa0778570 | 0.807272 | 5.482147e-50 | -8.615850e-47 |
| Msa0307740 | Msa0778570 | 0.833073 | 6.574823e-56 | -8.615850e-47 |
| Msa0308470 | Msa0778570 | 0.803061 | 4.171957e-49 | -8.615850e-47 |
| Msa0343210 | Msa0778570 | 0.800785 | 1.224615e-48 | -8.615850e-47 |
| Msa0345050 | Msa0778570 | 0.827540 | 1.478699e-54 | -8.615850e-47 |
| Msa0357310 | Msa0778570 | 0.827122 | 1.862090e-54 | -8.615850e-47 |
| Msa0483970 | Msa0778570 | -0.801385 | 9.231408e-49 | -8.615850e-47 |
| Msa0490320 | Msa0778570 | 0.809480 | 1.853519e-50 | -8.615850e-47 |
| Msa0492330 | Msa0778570 | -0.805234 | 1.472997e-49 | -8.615850e-47 |
| Msa0501080 | Msa0778570 | 0.814772 | 1.299704e-51 | -8.615850e-47 |
| Msa0512630 | Msa0778570 | 0.807971 | 3.894661e-50 | -8.615850e-47 |
| Msa0529110 | Msa0778570 | 0.800457 | 1.428751e-48 | -8.615850e-47 |
| Msa0531050 | Msa0778570 | 0.854480 | 1.197160e-61 | -8.615850e-47 |
| Msa0546590 | Msa0778570 | 0.804698 | 1.906260e-49 | -8.615850e-47 |
| Msa0548420 | Msa0778570 | 0.821552 | 3.800470e-53 | -8.615850e-47 |
| Msa0566280 | Msa0778570 | 0.863282 | 2.781976e-64 | -8.615850e-47 |
| Msa0567330 | Msa0778570 | 0.814073 | 1.854934e-51 | -8.615850e-47 |
| Msa0576320 | Msa0778570 | 0.804782 | 1.831417e-49 | -8.615850e-47 |
| Msa0580140 | Msa0778570 | 0.811837 | 5.734192e-51 | -8.615850e-47 |
| Msa0580890 | Msa0778570 | -0.803681 | 3.104691e-49 | -8.615850e-47 |
| Msa0588040 | Msa0778570 | 0.839666 | 1.382136e-57 | -8.615850e-47 |
| Msa0590620 | Msa0778570 | -0.827299 | 1.689399e-54 | -8.615850e-47 |
| Msa0590810 | Msa0778570 | 0.800583 | 1.346187e-48 | -8.615850e-47 |
| Msa0596840 | Msa0778570 | 0.814152 | 1.782120e-51 | -8.615850e-47 |
| Msa0597180 | Msa0778570 | 0.815399 | 9.429940e-52 | -8.615850e-47 |
| Msa0597370 | Msa0778570 | -0.800524 | 1.384209e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0778570 | MtrunA17_Chr5g0434631 | 97.917 | 96 | 2 | 0 | 1 | 96 | 1 | 96 | 1.62e-66 | 194 |
| Msa0778570 | MtrunA17_Chr7g0256821 | 73.134 | 67 | 18 | 0 | 30 | 96 | 54 | 120 | 7.90e-33 | 110 |
| Msa0778570 | MtrunA17_Chr5g0415001 | 53.333 | 90 | 39 | 2 | 9 | 96 | 4 | 92 | 1.33e-31 | 106 |
| Msa0778570 | MtrunA17_Chr6g0453241 | 52.577 | 97 | 37 | 1 | 9 | 96 | 11 | 107 | 3.04e-31 | 105 |
| Msa0778570 | MtrunA17_Chr7g0217311 | 51.042 | 96 | 38 | 1 | 10 | 96 | 14 | 109 | 4.08e-30 | 103 |
| Msa0778570 | MtrunA17_Chr3g0092361 | 52.688 | 93 | 40 | 1 | 8 | 96 | 11 | 103 | 1.28e-29 | 101 |
| Msa0778570 | MtrunA17_Chr5g0446671 | 73.333 | 60 | 16 | 0 | 37 | 96 | 6 | 65 | 3.63e-29 | 99.4 |
| Msa0778570 | MtrunA17_Chr3g0078781 | 71.667 | 60 | 17 | 0 | 37 | 96 | 6 | 65 | 8.73e-29 | 98.6 |
| Msa0778570 | MtrunA17_Chr5g0415091 | 61.667 | 60 | 23 | 0 | 37 | 96 | 29 | 88 | 2.22e-23 | 85.5 |
| Msa0778570 | MtrunA17_Chr5g0415111 | 48.276 | 87 | 38 | 1 | 10 | 96 | 4 | 83 | 9.83e-22 | 81.3 |
| Msa0778570 | MtrunA17_Chr5g0415051 | 56.667 | 60 | 26 | 0 | 37 | 96 | 12 | 71 | 3.16e-19 | 74.3 |
| Msa0778570 | MtrunA17_Chr1g0200531 | 42.105 | 95 | 51 | 1 | 6 | 96 | 6 | 100 | 2.21e-18 | 73.2 |
| Msa0778570 | MtrunA17_Chr1g0156601 | 40.816 | 98 | 49 | 2 | 8 | 96 | 4 | 101 | 8.53e-16 | 66.6 |
| Msa0778570 | MtrunA17_Chr1g0156621 | 49.315 | 73 | 36 | 1 | 25 | 96 | 28 | 100 | 1.48e-15 | 65.9 |
| Msa0778570 | MtrunA17_Chr8g0364311 | 44.872 | 78 | 42 | 1 | 20 | 96 | 35 | 112 | 7.94e-15 | 64.3 |
| Msa0778570 | MtrunA17_Chr3g0134511 | 50.847 | 59 | 29 | 0 | 38 | 96 | 27 | 85 | 1.33e-14 | 63.2 |
| Msa0778570 | MtrunA17_Chr1g0207611 | 46.667 | 60 | 32 | 0 | 37 | 96 | 31 | 90 | 5.97e-14 | 61.6 |
| Msa0778570 | MtrunA17_Chr3g0142671 | 39.362 | 94 | 52 | 2 | 8 | 96 | 10 | 103 | 1.12e-13 | 61.2 |
| Msa0778570 | MtrunA17_Chr4g0013021 | 43.939 | 66 | 36 | 1 | 8 | 72 | 3 | 68 | 1.89e-12 | 57.4 |
| Msa0778570 | MtrunA17_Chr1g0152851 | 41.379 | 87 | 51 | 0 | 10 | 96 | 5 | 91 | 1.39e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0778570 | AT1G74670.1 | 58.696 | 92 | 34 | 1 | 9 | 96 | 10 | 101 | 5.65e-34 | 113 |
| Msa0778570 | AT3G02885.1 | 71.233 | 73 | 21 | 0 | 24 | 96 | 25 | 97 | 5.59e-29 | 100 |
| Msa0778570 | AT5G15230.1 | 51.546 | 97 | 38 | 2 | 9 | 96 | 10 | 106 | 6.59e-27 | 95.5 |
| Msa0778570 | AT2G30810.1 | 52.000 | 100 | 36 | 1 | 9 | 96 | 7 | 106 | 2.70e-26 | 94.0 |
| Msa0778570 | AT3G10185.1 | 64.000 | 75 | 27 | 0 | 22 | 96 | 48 | 122 | 6.93e-25 | 90.9 |
| Msa0778570 | AT5G15230.2 | 54.217 | 83 | 35 | 1 | 17 | 96 | 1 | 83 | 7.57e-25 | 89.4 |
| Msa0778570 | AT2G39540.1 | 37.931 | 87 | 47 | 1 | 10 | 96 | 8 | 87 | 8.84e-16 | 66.6 |
| Msa0778570 | AT1G10588.1 | 40.909 | 88 | 45 | 2 | 10 | 96 | 9 | 90 | 1.53e-14 | 63.5 |
| Msa0778570 | AT1G22690.1 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0778570 | AT1G22690.2 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0778570 | AT1G22690.3 | 48.052 | 77 | 38 | 2 | 22 | 96 | 43 | 119 | 3.00e-14 | 63.5 |
| Msa0778570 | AT1G10588.2 | 39.773 | 88 | 45 | 2 | 10 | 96 | 9 | 89 | 5.50e-14 | 62.0 |
| Msa0778570 | AT4G09600.1 | 50.000 | 60 | 30 | 0 | 37 | 96 | 40 | 99 | 6.65e-14 | 62.0 |
| Msa0778570 | AT5G59845.1 | 36.364 | 88 | 49 | 2 | 10 | 96 | 8 | 89 | 7.62e-13 | 59.3 |
| Msa0778570 | AT2G18420.1 | 50.000 | 60 | 30 | 0 | 37 | 96 | 35 | 94 | 9.69e-13 | 58.9 |
| Msa0778570 | AT2G18420.2 | 50.000 | 60 | 30 | 0 | 37 | 96 | 11 | 70 | 1.11e-12 | 58.2 |
| Msa0778570 | AT5G14920.1 | 54.098 | 61 | 27 | 1 | 37 | 96 | 215 | 275 | 6.72e-12 | 59.7 |
| Msa0778570 | AT2G14900.1 | 34.118 | 85 | 45 | 1 | 23 | 96 | 24 | 108 | 2.40e-11 | 55.8 |
Find 37 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGGCATTCTTAAATTT+TGG | 0.170383 | 5_2:-59099499 | Msa0778570:three_prime_UTR |
| TGAGTATATGATATTATATT+TGG | 0.217941 | 5_2:+59099283 | None:intergenic |
| GGTCATCTCTTTGCTTCTTT+TGG | 0.218438 | 5_2:-59100693 | Msa0778570:CDS |
| CTTTCAACCTTCATATATTA+TGG | 0.238802 | 5_2:+59099516 | None:intergenic |
| TTAAGTGCTTAAGGGCATTT+TGG | 0.257598 | 5_2:+59099688 | None:intergenic |
| GTGTTATTTGAATATCATAT+TGG | 0.285158 | 5_2:-59099311 | Msa0778570:three_prime_UTR |
| TGTTATTTGAATATCATATT+GGG | 0.286165 | 5_2:-59099310 | Msa0778570:three_prime_UTR |
| TGTGTTCCTCCTGGTGTATA+TGG | 0.309163 | 5_2:-59099763 | Msa0778570:CDS |
| TTGAAGAAATTAAGTGCTTA+AGG | 0.326452 | 5_2:+59099679 | None:intergenic |
| GTGATCCTTGAACAGGCTTA+TGG | 0.330002 | 5_2:-59100502 | Msa0778570:intron |
| TGAAGAAATTAAGTGCTTAA+GGG | 0.385678 | 5_2:+59099680 | None:intergenic |
| TCATGCCTTTGTGTTCCTCC+TGG | 0.416024 | 5_2:-59099772 | Msa0778570:CDS |
| ACTCACCTTTCATACAATAT+AGG | 0.416602 | 5_2:+59099587 | None:intergenic |
| TTTGTCCTTGCTACAACAGC+TGG | 0.443536 | 5_2:-59099729 | Msa0778570:CDS |
| CTTCATATATTATGGTCAAA+AGG | 0.477709 | 5_2:+59099524 | None:intergenic |
| TCATACCTATATTGTATGAA+AGG | 0.479328 | 5_2:-59099592 | Msa0778570:three_prime_UTR |
| CATGGTGAGTGTCATTGAAA+AGG | 0.482399 | 5_2:+59099558 | None:intergenic |
| TGCTGCCATTGTTGTGAAAG+TGG | 0.523273 | 5_2:+59100739 | None:intergenic |
| CATAATATATGAAGGTTGAA+AGG | 0.525325 | 5_2:-59099515 | Msa0778570:three_prime_UTR |
| TTGCAATGGCTCCATCTTGG+TGG | 0.538056 | 5_2:-59100714 | Msa0778570:CDS |
| CAAAAGGACAAGATCATACA+TGG | 0.556119 | 5_2:+59099540 | None:intergenic |
| CAAAGAGATGACCACCAAGA+TGG | 0.560846 | 5_2:+59100703 | None:intergenic |
| CGTGCAAAACTTCGTCCTCA+AGG | 0.561656 | 5_2:-59100478 | Msa0778570:intron |
| ACGTTGCAATGGCTCCATCT+TGG | 0.582831 | 5_2:-59100717 | Msa0778570:CDS |
| GTCTTCCAGCTGTTGTAGCA+AGG | 0.586689 | 5_2:+59099724 | None:intergenic |
| TACATTCTCTAATGTAGCTG+AGG | 0.595669 | 5_2:-59100669 | Msa0778570:intron |
| GTTATTTGAATATCATATTG+GGG | 0.598241 | 5_2:-59099309 | Msa0778570:three_prime_UTR |
| TGCTTGTTGCCATATACACC+AGG | 0.601222 | 5_2:+59099754 | None:intergenic |
| ACAATGGCAGCACGTTGCAA+TGG | 0.611244 | 5_2:-59100728 | Msa0778570:CDS |
| AAGTTCCACTTTCACAACAA+TGG | 0.613001 | 5_2:-59100744 | Msa0778570:exon |
| CTACAACAGCTGGAAGACAC+AGG | 0.616939 | 5_2:-59099719 | Msa0778570:CDS |
| GAGCAACGATATGTACACCT+TGG | 0.623615 | 5_2:+59099847 | None:intergenic |
| AACAGCTGGAAGACACAGGA+AGG | 0.640099 | 5_2:-59099715 | Msa0778570:CDS |
| GTACTCTTGCAGTACTACAA+AGG | 0.645401 | 5_2:+59099360 | None:intergenic |
| ATGAAACAGATTGTAAACCA+AGG | 0.669189 | 5_2:-59099864 | Msa0778570:intron |
| TTGTTGCCATATACACCAGG+AGG | 0.729916 | 5_2:+59099757 | None:intergenic |
| ATACACCAGGAGGAACACAA+AGG | 0.753714 | 5_2:+59099767 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATAACTTGTTTAAAAAT+TGG | - | chr5_2:59099857-59099876 | Msa0778570:CDS | 15.0% |
| !! | CCAAATTTGAAAAATAAATA+AGG | + | chr5_2:59100458-59100477 | None:intergenic | 15.0% |
| !!! | CCTTATTTATTTTTCAAATT+TGG | - | chr5_2:59100455-59100474 | Msa0778570:intron | 15.0% |
| !!! | ACACAATAATTTTTTTTTGA+GGG | + | chr5_2:59100636-59100655 | None:intergenic | 15.0% |
| !!! | TACACAATAATTTTTTTTTG+AGG | + | chr5_2:59100637-59100656 | None:intergenic | 15.0% |
| !!! | TGTTATTTGAATATCATATT+GGG | - | chr5_2:59100775-59100794 | Msa0778570:five_prime_UTR | 15.0% |
| !! | TGAGTATATGATATTATATT+TGG | + | chr5_2:59100805-59100824 | None:intergenic | 15.0% |
| !!! | AGTATAACTTGTTTAAAAAT+TGG | - | chr5_2:59099857-59099876 | Msa0778570:CDS | 15.0% |
| !! | CCAAATTTGAAAAATAAATA+AGG | + | chr5_2:59100458-59100477 | None:intergenic | 15.0% |
| !!! | CCTTATTTATTTTTCAAATT+TGG | - | chr5_2:59100455-59100474 | Msa0778570:intron | 15.0% |
| !!! | ACACAATAATTTTTTTTTGA+GGG | + | chr5_2:59100636-59100655 | None:intergenic | 15.0% |
| !!! | TACACAATAATTTTTTTTTG+AGG | + | chr5_2:59100637-59100656 | None:intergenic | 15.0% |
| !!! | TGTTATTTGAATATCATATT+GGG | - | chr5_2:59100775-59100794 | Msa0778570:five_prime_UTR | 15.0% |
| !! | TGAGTATATGATATTATATT+TGG | + | chr5_2:59100805-59100824 | None:intergenic | 15.0% |
| !! | AAAACCATTTACTATATGAT+TGG | - | chr5_2:59099462-59099481 | Msa0778570:three_prime_UTR | 20.0% |
| !! | GTTCTAATATTTCAAAACTT+TGG | - | chr5_2:59099553-59099572 | Msa0778570:three_prime_UTR | 20.0% |
| !!! | TCCTCCATTAAAATAAATTT+TGG | - | chr5_2:59099734-59099753 | Msa0778570:CDS | 20.0% |
| !!! | ACTGCCAAAATTTATTTTAA+TGG | + | chr5_2:59099741-59099760 | None:intergenic | 20.0% |
| !!! | TAAATTTTGGCAGTTTTATA+AGG | - | chr5_2:59099747-59099766 | Msa0778570:CDS | 20.0% |
| !!! | TTTTATAAGGAATTTTTCCT+TGG | - | chr5_2:59099760-59099779 | Msa0778570:CDS | 20.0% |
| !!! | CACAATAATTTTTTTTTGAG+GGG | + | chr5_2:59100635-59100654 | None:intergenic | 20.0% |
| !! | AAAAAAATTATTGTGTACCT+TGG | - | chr5_2:59100640-59100659 | Msa0778570:intron | 20.0% |
| !!! | GTGTTATTTGAATATCATAT+TGG | - | chr5_2:59100774-59100793 | Msa0778570:five_prime_UTR | 20.0% |
| !! | GTTATTTGAATATCATATTG+GGG | - | chr5_2:59100776-59100795 | Msa0778570:five_prime_UTR | 20.0% |
| !! | AAAACCATTTACTATATGAT+TGG | - | chr5_2:59099462-59099481 | Msa0778570:three_prime_UTR | 20.0% |
| !! | GTTCTAATATTTCAAAACTT+TGG | - | chr5_2:59099553-59099572 | Msa0778570:three_prime_UTR | 20.0% |
| !!! | TCCTCCATTAAAATAAATTT+TGG | - | chr5_2:59099734-59099753 | Msa0778570:CDS | 20.0% |
| !!! | ACTGCCAAAATTTATTTTAA+TGG | + | chr5_2:59099741-59099760 | None:intergenic | 20.0% |
| !!! | TAAATTTTGGCAGTTTTATA+AGG | - | chr5_2:59099747-59099766 | Msa0778570:CDS | 20.0% |
| !!! | TTTTATAAGGAATTTTTCCT+TGG | - | chr5_2:59099760-59099779 | Msa0778570:CDS | 20.0% |
| !!! | CACAATAATTTTTTTTTGAG+GGG | + | chr5_2:59100635-59100654 | None:intergenic | 20.0% |
| !! | AAAAAAATTATTGTGTACCT+TGG | - | chr5_2:59100640-59100659 | Msa0778570:intron | 20.0% |
| !!! | GTGTTATTTGAATATCATAT+TGG | - | chr5_2:59100774-59100793 | Msa0778570:five_prime_UTR | 20.0% |
| !! | GTTATTTGAATATCATATTG+GGG | - | chr5_2:59100776-59100795 | Msa0778570:five_prime_UTR | 20.0% |
| ! | TGATCCAATCATATAGTAAA+TGG | + | chr5_2:59099469-59099488 | None:intergenic | 25.0% |
| ! | TTGCATATATATATACCTTG+AGG | + | chr5_2:59099625-59099644 | None:intergenic | 25.0% |
| !! | TTGTGTCTATAAGCAAATTT+TGG | - | chr5_2:59099668-59099687 | Msa0778570:three_prime_UTR | 25.0% |
| !! | TGTGTCTATAAGCAAATTTT+GGG | - | chr5_2:59099669-59099688 | Msa0778570:three_prime_UTR | 25.0% |
| !!! | GCCAAAATTTATTTTAATGG+AGG | + | chr5_2:59099738-59099757 | None:intergenic | 25.0% |
| ! | TAAATTATTAATGTTGAGCG+AGG | + | chr5_2:59099799-59099818 | None:intergenic | 25.0% |
| ! | TGTATAAGCAACCTAAAATT+TGG | - | chr5_2:59099971-59099990 | Msa0778570:intron | 25.0% |
| ! | GTATAAGCAACCTAAAATTT+GGG | - | chr5_2:59099972-59099991 | Msa0778570:intron | 25.0% |
| ! | TGAAGAAATTAAGTGCTTAA+GGG | + | chr5_2:59100408-59100427 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTAAGTGCTTA+AGG | + | chr5_2:59100409-59100428 | None:intergenic | 25.0% |
| ! | TCATACCTATATTGTATGAA+AGG | - | chr5_2:59100493-59100512 | Msa0778570:intron | 25.0% |
| ! | CTTCATATATTATGGTCAAA+AGG | + | chr5_2:59100564-59100583 | None:intergenic | 25.0% |
| !! | CTTTTGACCATAATATATGA+AGG | - | chr5_2:59100562-59100581 | Msa0778570:intron | 25.0% |
| ! | CTTTCAACCTTCATATATTA+TGG | + | chr5_2:59100572-59100591 | None:intergenic | 25.0% |
| ! | CATAATATATGAAGGTTGAA+AGG | - | chr5_2:59100570-59100589 | Msa0778570:intron | 25.0% |
| !!! | TGAAAGGCATTCTTAAATTT+TGG | - | chr5_2:59100586-59100605 | Msa0778570:intron | 25.0% |
| ! | AACATTGAAAAACAAAACCA+AGG | + | chr5_2:59100660-59100679 | None:intergenic | 25.0% |
| ! | TGATCCAATCATATAGTAAA+TGG | + | chr5_2:59099469-59099488 | None:intergenic | 25.0% |
| ! | TTGCATATATATATACCTTG+AGG | + | chr5_2:59099625-59099644 | None:intergenic | 25.0% |
| !! | TTGTGTCTATAAGCAAATTT+TGG | - | chr5_2:59099668-59099687 | Msa0778570:three_prime_UTR | 25.0% |
| !! | TGTGTCTATAAGCAAATTTT+GGG | - | chr5_2:59099669-59099688 | Msa0778570:three_prime_UTR | 25.0% |
| !!! | GCCAAAATTTATTTTAATGG+AGG | + | chr5_2:59099738-59099757 | None:intergenic | 25.0% |
| ! | TAAATTATTAATGTTGAGCG+AGG | + | chr5_2:59099799-59099818 | None:intergenic | 25.0% |
| ! | TGTATAAGCAACCTAAAATT+TGG | - | chr5_2:59099971-59099990 | Msa0778570:intron | 25.0% |
| ! | GTATAAGCAACCTAAAATTT+GGG | - | chr5_2:59099972-59099991 | Msa0778570:intron | 25.0% |
| ! | TGAAGAAATTAAGTGCTTAA+GGG | + | chr5_2:59100408-59100427 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTAAGTGCTTA+AGG | + | chr5_2:59100409-59100428 | None:intergenic | 25.0% |
| ! | TCATACCTATATTGTATGAA+AGG | - | chr5_2:59100493-59100512 | Msa0778570:intron | 25.0% |
| ! | CTTCATATATTATGGTCAAA+AGG | + | chr5_2:59100564-59100583 | None:intergenic | 25.0% |
| !! | CTTTTGACCATAATATATGA+AGG | - | chr5_2:59100562-59100581 | Msa0778570:intron | 25.0% |
| ! | CTTTCAACCTTCATATATTA+TGG | + | chr5_2:59100572-59100591 | None:intergenic | 25.0% |
| ! | CATAATATATGAAGGTTGAA+AGG | - | chr5_2:59100570-59100589 | Msa0778570:intron | 25.0% |
| !!! | TGAAAGGCATTCTTAAATTT+TGG | - | chr5_2:59100586-59100605 | Msa0778570:intron | 25.0% |
| ! | AACATTGAAAAACAAAACCA+AGG | + | chr5_2:59100660-59100679 | None:intergenic | 25.0% |
| ! | TAGTCCAAATCCCAAATTTT+AGG | + | chr5_2:59099985-59100004 | None:intergenic | 30.0% |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_2:59100048-59100067 | None:intergenic | 30.0% | |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_2:59100048-59100067 | None:intergenic | 30.0% | |
| ATGAAACAGATTGTAAACCA+AGG | - | chr5_2:59100221-59100240 | Msa0778570:intron | 30.0% | |
| ACTCACCTTTCATACAATAT+AGG | + | chr5_2:59100501-59100520 | None:intergenic | 30.0% | |
| ! | GTATCTAGTATTTTGTACCA+AGG | - | chr5_2:59100608-59100627 | Msa0778570:intron | 30.0% |
| ! | TAGTCCAAATCCCAAATTTT+AGG | + | chr5_2:59099985-59100004 | None:intergenic | 30.0% |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_2:59100048-59100067 | None:intergenic | 30.0% | |
| TTTCACCACTTATTCAAGAT+CGG | + | chr5_2:59100048-59100067 | None:intergenic | 30.0% | |
| ATGAAACAGATTGTAAACCA+AGG | - | chr5_2:59100221-59100240 | Msa0778570:intron | 30.0% | |
| ACTCACCTTTCATACAATAT+AGG | + | chr5_2:59100501-59100520 | None:intergenic | 30.0% | |
| ! | GTATCTAGTATTTTGTACCA+AGG | - | chr5_2:59100608-59100627 | Msa0778570:intron | 30.0% |
| AAGTTCCACTTTCACAACAA+TGG | - | chr5_2:59099341-59099360 | Msa0778570:three_prime_UTR | 35.0% | |
| TACATTCTCTAATGTAGCTG+AGG | - | chr5_2:59099416-59099435 | Msa0778570:three_prime_UTR | 35.0% | |
| ! | TTTTTGTGTGATCCTTGAAC+AGG | - | chr5_2:59099576-59099595 | Msa0778570:three_prime_UTR | 35.0% |
| ! | GCAACCTAAAATTTGGGATT+TGG | - | chr5_2:59099978-59099997 | Msa0778570:intron | 35.0% |
| ! | TTTTGGCAGAAAAACATGCA+TGG | + | chr5_2:59100283-59100302 | None:intergenic | 35.0% |
| !!! | TTAAGTGCTTAAGGGCATTT+TGG | + | chr5_2:59100400-59100419 | None:intergenic | 35.0% |
| CAAAAGGACAAGATCATACA+TGG | + | chr5_2:59100548-59100567 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTTTGAGGGGACCT+TGG | + | chr5_2:59100628-59100647 | None:intergenic | 35.0% |
| AAGTTCCACTTTCACAACAA+TGG | - | chr5_2:59099341-59099360 | Msa0778570:three_prime_UTR | 35.0% | |
| TACATTCTCTAATGTAGCTG+AGG | - | chr5_2:59099416-59099435 | Msa0778570:three_prime_UTR | 35.0% | |
| ! | TTTTTGTGTGATCCTTGAAC+AGG | - | chr5_2:59099576-59099595 | Msa0778570:three_prime_UTR | 35.0% |
| ! | GCAACCTAAAATTTGGGATT+TGG | - | chr5_2:59099978-59099997 | Msa0778570:intron | 35.0% |
| ! | TTTTGGCAGAAAAACATGCA+TGG | + | chr5_2:59100283-59100302 | None:intergenic | 35.0% |
| !!! | TTAAGTGCTTAAGGGCATTT+TGG | + | chr5_2:59100400-59100419 | None:intergenic | 35.0% |
| CAAAAGGACAAGATCATACA+TGG | + | chr5_2:59100548-59100567 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTTTGAGGGGACCT+TGG | + | chr5_2:59100628-59100647 | None:intergenic | 35.0% |
| !! | AGTGGAACTTTGCTTTTGAG+AGG | + | chr5_2:59099331-59099350 | None:intergenic | 40.0% |
| ! | GGTCATCTCTTTGCTTCTTT+TGG | - | chr5_2:59099392-59099411 | Msa0778570:three_prime_UTR | 40.0% |
| !!! | GAGGACTTTTTTTACTGCCA+AGG | + | chr5_2:59099780-59099799 | None:intergenic | 40.0% |
| ! | GGCATGAAGCACAACATTTT+TGG | + | chr5_2:59100300-59100319 | None:intergenic | 40.0% |
| ! | CATGGTGAGTGTCATTGAAA+AGG | + | chr5_2:59100530-59100549 | None:intergenic | 40.0% |
| GTACTCTTGCAGTACTACAA+AGG | + | chr5_2:59100728-59100747 | None:intergenic | 40.0% | |
| !! | AGTGGAACTTTGCTTTTGAG+AGG | + | chr5_2:59099331-59099350 | None:intergenic | 40.0% |
| ! | GGTCATCTCTTTGCTTCTTT+TGG | - | chr5_2:59099392-59099411 | Msa0778570:three_prime_UTR | 40.0% |
| !!! | GAGGACTTTTTTTACTGCCA+AGG | + | chr5_2:59099780-59099799 | None:intergenic | 40.0% |
| ! | GGCATGAAGCACAACATTTT+TGG | + | chr5_2:59100300-59100319 | None:intergenic | 40.0% |
| ! | CATGGTGAGTGTCATTGAAA+AGG | + | chr5_2:59100530-59100549 | None:intergenic | 40.0% |
| GTACTCTTGCAGTACTACAA+AGG | + | chr5_2:59100728-59100747 | None:intergenic | 40.0% | |
| TGCTGCCATTGTTGTGAAAG+TGG | + | chr5_2:59099349-59099368 | None:intergenic | 45.0% | |
| CAAAGAGATGACCACCAAGA+TGG | + | chr5_2:59099385-59099404 | None:intergenic | 45.0% | |
| GTGATCCTTGAACAGGCTTA+TGG | - | chr5_2:59099583-59099602 | Msa0778570:three_prime_UTR | 45.0% | |
| TCTCACTATGTCACGCATCA+TGG | + | chr5_2:59099931-59099950 | None:intergenic | 45.0% | |
| ! | TTTGGGATTTGGACTACACG+TGG | - | chr5_2:59099989-59100008 | Msa0778570:intron | 45.0% |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_2:59100040-59100059 | Msa0778570:intron | 45.0% | |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_2:59100040-59100059 | Msa0778570:intron | 45.0% | |
| GAGCAACGATATGTACACCT+TGG | + | chr5_2:59100241-59100260 | None:intergenic | 45.0% | |
| ATACACCAGGAGGAACACAA+AGG | + | chr5_2:59100321-59100340 | None:intergenic | 45.0% | |
| TGTGTTCCTCCTGGTGTATA+TGG | - | chr5_2:59100322-59100341 | Msa0778570:intron | 45.0% | |
| TTGTTGCCATATACACCAGG+AGG | + | chr5_2:59100331-59100350 | None:intergenic | 45.0% | |
| ! | TGCTTGTTGCCATATACACC+AGG | + | chr5_2:59100334-59100353 | None:intergenic | 45.0% |
| TTTGTCCTTGCTACAACAGC+TGG | - | chr5_2:59100356-59100375 | Msa0778570:intron | 45.0% | |
| TGCTGCCATTGTTGTGAAAG+TGG | + | chr5_2:59099349-59099368 | None:intergenic | 45.0% | |
| CAAAGAGATGACCACCAAGA+TGG | + | chr5_2:59099385-59099404 | None:intergenic | 45.0% | |
| GTGATCCTTGAACAGGCTTA+TGG | - | chr5_2:59099583-59099602 | Msa0778570:three_prime_UTR | 45.0% | |
| TCTCACTATGTCACGCATCA+TGG | + | chr5_2:59099931-59099950 | None:intergenic | 45.0% | |
| ! | TTTGGGATTTGGACTACACG+TGG | - | chr5_2:59099989-59100008 | Msa0778570:intron | 45.0% |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_2:59100040-59100059 | Msa0778570:intron | 45.0% | |
| GTCGTCCGATCTTGAATAAG+TGG | - | chr5_2:59100040-59100059 | Msa0778570:intron | 45.0% | |
| GAGCAACGATATGTACACCT+TGG | + | chr5_2:59100241-59100260 | None:intergenic | 45.0% | |
| ATACACCAGGAGGAACACAA+AGG | + | chr5_2:59100321-59100340 | None:intergenic | 45.0% | |
| TGTGTTCCTCCTGGTGTATA+TGG | - | chr5_2:59100322-59100341 | Msa0778570:intron | 45.0% | |
| TTGTTGCCATATACACCAGG+AGG | + | chr5_2:59100331-59100350 | None:intergenic | 45.0% | |
| ! | TGCTTGTTGCCATATACACC+AGG | + | chr5_2:59100334-59100353 | None:intergenic | 45.0% |
| TTTGTCCTTGCTACAACAGC+TGG | - | chr5_2:59100356-59100375 | Msa0778570:intron | 45.0% | |
| ACAATGGCAGCACGTTGCAA+TGG | - | chr5_2:59099357-59099376 | Msa0778570:three_prime_UTR | 50.0% | |
| ACGTTGCAATGGCTCCATCT+TGG | - | chr5_2:59099368-59099387 | Msa0778570:three_prime_UTR | 50.0% | |
| TTGCAATGGCTCCATCTTGG+TGG | - | chr5_2:59099371-59099390 | Msa0778570:three_prime_UTR | 50.0% | |
| CACGTCCATAAGCCTGTTCA+AGG | + | chr5_2:59099591-59099610 | None:intergenic | 50.0% | |
| CGTGCAAAACTTCGTCCTCA+AGG | - | chr5_2:59099607-59099626 | Msa0778570:three_prime_UTR | 50.0% | |
| TCATGCCTTTGTGTTCCTCC+TGG | - | chr5_2:59100313-59100332 | Msa0778570:intron | 50.0% | |
| GTCTTCCAGCTGTTGTAGCA+AGG | + | chr5_2:59100364-59100383 | None:intergenic | 50.0% | |
| CTACAACAGCTGGAAGACAC+AGG | - | chr5_2:59100366-59100385 | Msa0778570:intron | 50.0% | |
| AACAGCTGGAAGACACAGGA+AGG | - | chr5_2:59100370-59100389 | Msa0778570:intron | 50.0% | |
| ACAATGGCAGCACGTTGCAA+TGG | - | chr5_2:59099357-59099376 | Msa0778570:three_prime_UTR | 50.0% | |
| ACGTTGCAATGGCTCCATCT+TGG | - | chr5_2:59099368-59099387 | Msa0778570:three_prime_UTR | 50.0% | |
| TTGCAATGGCTCCATCTTGG+TGG | - | chr5_2:59099371-59099390 | Msa0778570:three_prime_UTR | 50.0% | |
| CACGTCCATAAGCCTGTTCA+AGG | + | chr5_2:59099591-59099610 | None:intergenic | 50.0% | |
| CGTGCAAAACTTCGTCCTCA+AGG | - | chr5_2:59099607-59099626 | Msa0778570:three_prime_UTR | 50.0% | |
| TCATGCCTTTGTGTTCCTCC+TGG | - | chr5_2:59100313-59100332 | Msa0778570:intron | 50.0% | |
| GTCTTCCAGCTGTTGTAGCA+AGG | + | chr5_2:59100364-59100383 | None:intergenic | 50.0% | |
| CTACAACAGCTGGAAGACAC+AGG | - | chr5_2:59100366-59100385 | Msa0778570:intron | 50.0% | |
| AACAGCTGGAAGACACAGGA+AGG | - | chr5_2:59100370-59100389 | Msa0778570:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 59099274 | 59100833 | 59099274 | ID=Msa0778570;Name=Msa0778570 |
| chr5_2 | mRNA | 59099274 | 59100833 | 59099274 | ID=Msa0778570-mRNA-1;Parent=Msa0778570;Name=Msa0778570-mRNA-1;_AED=0.04;_eAED=0.04;_QI=86|1|1|1|0.5|0.66|3|422|96 |
| chr5_2 | exon | 59099274 | 59099877 | 59099274 | ID=Msa0778570-mRNA-1:exon:17450;Parent=Msa0778570-mRNA-1 |
| chr5_2 | exon | 59100479 | 59100509 | 59100479 | ID=Msa0778570-mRNA-1:exon:17449;Parent=Msa0778570-mRNA-1 |
| chr5_2 | exon | 59100670 | 59100833 | 59100670 | ID=Msa0778570-mRNA-1:exon:17448;Parent=Msa0778570-mRNA-1 |
| chr5_2 | five_prime_UTR | 59100748 | 59100833 | 59100748 | ID=Msa0778570-mRNA-1:five_prime_utr;Parent=Msa0778570-mRNA-1 |
| chr5_2 | CDS | 59100670 | 59100747 | 59100670 | ID=Msa0778570-mRNA-1:cds;Parent=Msa0778570-mRNA-1 |
| chr5_2 | CDS | 59100479 | 59100509 | 59100479 | ID=Msa0778570-mRNA-1:cds;Parent=Msa0778570-mRNA-1 |
| chr5_2 | CDS | 59099696 | 59099877 | 59099696 | ID=Msa0778570-mRNA-1:cds;Parent=Msa0778570-mRNA-1 |
| chr5_2 | three_prime_UTR | 59099274 | 59099695 | 59099274 | ID=Msa0778570-mRNA-1:three_prime_utr;Parent=Msa0778570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
