AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0657110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0657110 MtrunA17_Chr8g0379001 98.172 383 6 1 1 382 69 451 0.0 779
Msa0657110 MtrunA17_Chr2g0283771 78.272 382 78 3 1 381 62 439 0.0 598
Msa0657110 MtrunA17_Chr3g0140681 43.258 356 187 5 17 370 56 398 1.34e-94 288
Msa0657110 MtrunA17_Chr4g0072801 44.290 359 170 6 20 369 72 409 5.92e-94 287
Msa0657110 MtrunA17_Chr0c06g0493481 42.257 381 174 8 6 369 65 416 2.01e-92 283
Msa0657110 MtrunA17_Chr1g0170451 42.939 347 172 4 21 367 30 350 1.28e-90 276
Msa0657110 MtrunA17_Chr7g0214251 51.765 85 40 1 89 172 42 126 5.12e-20 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0657110 AT1G29120.8 72.656 384 96 3 1 382 80 456 0.0 545
Msa0657110 AT1G29120.1 72.656 384 96 3 1 382 79 455 0.0 544
Msa0657110 AT1G29120.2 72.656 384 96 3 1 382 79 455 0.0 544
Msa0657110 AT1G29120.5 72.208 385 97 4 1 382 79 456 0.0 536
Msa0657110 AT1G29120.7 72.829 357 88 3 1 355 79 428 2.17e-178 503
Msa0657110 AT1G29120.4 72.871 317 77 3 1 315 79 388 1.31e-152 436
Msa0657110 AT1G29120.3 72.871 317 77 3 1 315 79 388 2.63e-152 436
Msa0657110 AT1G29120.6 70.325 246 64 3 1 244 79 317 1.82e-114 337
Msa0657110 AT4G25770.1 47.875 353 158 6 16 367 87 414 4.59e-102 308
Msa0657110 AT4G25770.2 48.060 335 146 5 16 348 87 395 2.47e-95 291
Msa0657110 AT5G51180.2 43.137 357 176 6 11 367 24 353 1.09e-90 277
Msa0657110 AT5G51180.1 43.137 357 176 6 11 367 24 353 1.09e-90 277
Msa0657110 AT1G10040.1 42.340 359 177 7 17 369 76 410 1.33e-89 276
Msa0657110 AT1G10040.2 42.604 338 164 7 17 348 76 389 2.10e-83 260

Find 162 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAGAACTTCCTAATTTA+TGG 0.106858 4_3:+66576616 Msa0657110:CDS
CGTTAATTCGTTATCATAAT+TGG 0.135145 4_3:-66575558 None:intergenic
TCCTTTGCTTTCACTGCTTC+TGG 0.142901 4_3:-66579959 None:intergenic
TCAGCTTTCACTCATCATTT+TGG 0.208591 4_3:+66580183 Msa0657110:CDS
CATCTCCTTGTTCTTGTTCA+TGG 0.217800 4_3:+66575761 Msa0657110:CDS
TCTGAAAAGAATCTCCTTTC+TGG 0.236492 4_3:+66577320 Msa0657110:CDS
GCAAAATTCAGGGACGAATT+TGG 0.254234 4_3:-66580828 None:intergenic
GCTTATACTAAGACGTTTAC+TGG 0.260732 4_3:+66577112 Msa0657110:CDS
TTCACATGATACCTATAATA+AGG 0.278470 4_3:+66577392 Msa0657110:CDS
GATGGACGTCTGCAAAATTC+AGG 0.281437 4_3:-66580839 None:intergenic
ATAACATTTGGCTTTCATTA+AGG 0.285674 4_3:+66575610 Msa0657110:five_prime_UTR
TCCTTTCTGGCCCACTCTTT+AGG 0.289850 4_3:+66577333 Msa0657110:CDS
ACTGGGTTGCCCTCCATATA+TGG 0.291897 4_3:-66575064 None:intergenic
TCCAATCATACCTAGAGATA+TGG 0.304912 4_3:-66574816 None:intergenic
TTTCTAGCATGGGAAATTCT+AGG 0.305809 4_3:+66575726 Msa0657110:CDS
AAATGTACTAACCATAAATT+AGG 0.309982 4_3:-66576627 None:intergenic
AATTTAAACAAATAATGTTT+TGG 0.312487 4_3:+66574977 Msa0657110:five_prime_UTR
ACCAGGTTGGTCCTTATTAT+AGG 0.313116 4_3:-66577403 None:intergenic
TTTCGAAAAGCTTGTACTTT+GGG 0.316035 4_3:-66577454 None:intergenic
CCTATGGCTCCTTTATTTGT+TGG 0.329773 4_3:+66578126 Msa0657110:CDS
CTATTAAACTAGTTGTTACT+AGG 0.335716 4_3:-66575534 None:intergenic
TGTTCTTGTTCATGGCATCT+TGG 0.337945 4_3:+66575769 Msa0657110:CDS
GAGGATGGAGGAAGCAAGTC+AGG 0.341385 4_3:-66575470 None:intergenic
ACAAGAAACATCGTCAATAT+TGG 0.350651 4_3:+66580381 Msa0657110:CDS
GCAGTGGGTTAGTGTATGTT+AGG 0.351660 4_3:-66574950 None:intergenic
TTTCCAGCTTCCATTTCTGC+TGG 0.353623 4_3:+66578074 Msa0657110:intron
CTTTCGAAAAGCTTGTACTT+TGG 0.355164 4_3:-66577455 None:intergenic
GGTATGATTGGATTTCTGTT+AGG 0.370258 4_3:+66574827 Msa0657110:five_prime_UTR
TCGAAAGGAGGGATGATTGC+TGG 0.377207 4_3:+66577471 Msa0657110:CDS
GGACGGAGGGACTGATTTGA+TGG 0.379044 4_3:-66580857 None:intergenic
TATAGGTATCATGTGAATAA+AGG 0.383951 4_3:-66577386 None:intergenic
CCCATATCTCTAGGTATGAT+TGG 0.385262 4_3:+66574815 Msa0657110:five_prime_UTR
GGGCCATCGGAAGGGACTGC+AGG 0.390467 4_3:-66579926 None:intergenic
GCTATGAGTTCTACCACTAA+TGG 0.391565 4_3:+66575695 Msa0657110:exon
ATCCAAGTATGAATAACATT+TGG 0.393588 4_3:+66575598 Msa0657110:five_prime_UTR
AGCCAAATGTTATTCATACT+TGG 0.396330 4_3:-66575600 None:intergenic
ACGAAGTGTTGTAAATATAT+CGG 0.397994 4_3:-66580504 None:intergenic
ACATTATTTGTTTAAATTGA+AGG 0.402567 4_3:-66574972 None:intergenic
AGAAATAGAGTTTCCATTAG+TGG 0.402967 4_3:-66575708 None:intergenic
ATTGGGACGCCCAGCAGAAA+TGG 0.405320 4_3:-66578084 None:intergenic
AAGACGTTTACTGGGATTGA+TGG 0.406587 4_3:+66577121 Msa0657110:CDS
AACTCATAGCTTGAGCTCTA+AGG 0.407078 4_3:-66575682 None:intergenic
CCTTTATTTGTTGGTCGGAC+TGG 0.408385 4_3:+66578135 Msa0657110:CDS
CTTGGATTATTAAGCCAGTA+TGG 0.410596 4_3:-66575582 None:intergenic
GTAAAGTTAAGTGCCATATA+TGG 0.412113 4_3:+66575051 Msa0657110:five_prime_UTR
CCTCCTCGCCAATCTTTAGA+TGG 0.414176 4_3:+66579872 Msa0657110:CDS
TAACTTTACAATCATTTCTA+CGG 0.414250 4_3:-66575037 None:intergenic
CCAGTCCGACCAACAAATAA+AGG 0.424489 4_3:-66578135 None:intergenic
AACAGAAGAGGTGGTCTGTT+GGG 0.428007 4_3:-66578186 None:intergenic
AACTTGATATAGATATGGTT+GGG 0.431541 4_3:+66578472 Msa0657110:intron
GTATATAATTTCACTGTGCC+TGG 0.431711 4_3:+66580423 Msa0657110:three_prime_UTR
TCTCCACATCTTGGTGTAAG+AGG 0.433082 4_3:+66577525 Msa0657110:CDS
ACTTTAGCATCTCCACATCT+TGG 0.442362 4_3:+66577516 Msa0657110:CDS
ATCTTGGTGTAAGAGGAAAA+AGG 0.442918 4_3:+66577532 Msa0657110:CDS
TTAACAGAGGAGATGATTCA+AGG 0.446850 4_3:+66580128 Msa0657110:intron
AGGAGGGATGATTGCTGGGT+TGG 0.447520 4_3:+66577476 Msa0657110:CDS
TTTCTTGGACCCCACTATGA+TGG 0.447635 4_3:-66575099 None:intergenic
TAGTGGCAACATTGTGCATT+GGG 0.448573 4_3:+66575421 Msa0657110:five_prime_UTR
CCAATCATACCTAGAGATAT+GGG 0.450111 4_3:-66574815 None:intergenic
ACAAGAACAAGGAGATGGTC+TGG 0.452536 4_3:-66575755 None:intergenic
TTGTTCATGGCATCTTGGCT+AGG 0.453514 4_3:+66575774 Msa0657110:CDS
AGAAAAGCTTGCTGCACCTA+TGG 0.460424 4_3:+66578110 Msa0657110:CDS
AACTTTACAATCATTTCTAC+GGG 0.463010 4_3:-66575036 None:intergenic
TGGCTCCTTTATTTGTTGGT+CGG 0.464101 4_3:+66578130 Msa0657110:CDS
TTCCAGCTTCCATTTCTGCT+GGG 0.464120 4_3:+66578075 Msa0657110:intron
CGAAAGGAGGGATGATTGCT+GGG 0.465668 4_3:+66577472 Msa0657110:CDS
ATAATTCAAGGACGAATTTG+AGG 0.472360 4_3:-66580795 None:intergenic
GCTAAAGTAATAAAATTGAT+TGG 0.472395 4_3:-66577501 None:intergenic
TTCTTGGACCCCACTATGAT+GGG 0.472495 4_3:-66575098 None:intergenic
ATCCTCGATAAGGAGGGAAA+TGG 0.473394 4_3:+66578503 Msa0657110:CDS
ACCACCTCTTCTGTTGAGAA+TGG 0.476842 4_3:+66578194 Msa0657110:CDS
TAACTTGATATAGATATGGT+TGG 0.477256 4_3:+66578471 Msa0657110:intron
TTTGTTTAAATTGAAGGCAG+TGG 0.480331 4_3:-66574966 None:intergenic
TCCTAAAGAGTGGGCCAGAA+AGG 0.480524 4_3:-66577334 None:intergenic
TAACGAATTAACGACCATAC+TGG 0.484120 4_3:+66575568 Msa0657110:five_prime_UTR
ATGGCTTCTGATTGTGAAGA+TGG 0.489648 4_3:+66578213 Msa0657110:CDS
TAAGGCTGGCAGTTGAACTT+TGG 0.494916 4_3:+66575628 Msa0657110:five_prime_UTR
TGATGGGAGCTCTACAGCAC+TGG 0.498510 4_3:-66575082 None:intergenic
CATTTGGCTTTCATTAAGGC+TGG 0.498985 4_3:+66575614 Msa0657110:five_prime_UTR
ATTCAAGGATTACAACAGTT+GGG 0.500650 4_3:+66580143 Msa0657110:CDS
GCTGGTATCCATCTAAAGAT+TGG 0.501403 4_3:-66579880 None:intergenic
CACAATGTTGCCACTACTCT+AGG 0.502095 4_3:-66575414 None:intergenic
GCTGGCAGTTGAACTTTGGC+AGG 0.505752 4_3:+66575632 Msa0657110:five_prime_UTR
TTGTTTAAATTGAAGGCAGT+GGG 0.508708 4_3:-66574965 None:intergenic
TGGAAACTCTATTTCTAGCA+TGG 0.508951 4_3:+66575715 Msa0657110:CDS
GGCCATCGGAAGGGACTGCA+GGG 0.513927 4_3:-66579925 None:intergenic
ACTGATACAGCACAGCGGAC+TGG 0.514147 4_3:+66576560 Msa0657110:intron
GGAAACTCTATTTCTAGCAT+GGG 0.517128 4_3:+66575716 Msa0657110:CDS
AAAATGATCGTCAAAGAAAG+AGG 0.518577 4_3:-66575489 None:intergenic
ATGGACGTCTGCAAAATTCA+GGG 0.518906 4_3:-66580838 None:intergenic
GGAAACTGAGGGCCATCGGA+AGG 0.521343 4_3:-66579935 None:intergenic
TTTGCTTTCACTGCTTCTGG+AGG 0.522349 4_3:-66579956 None:intergenic
GATTCAAGGATTACAACAGT+TGG 0.525073 4_3:+66580142 Msa0657110:CDS
CAACAGAAGAGGTGGTCTGT+TGG 0.525855 4_3:-66578187 None:intergenic
ATTGGAAATCCCATATCTCT+AGG 0.530931 4_3:+66574806 Msa0657110:five_prime_UTR
GTGCAGTTTAGTCATTTCCC+AGG 0.536047 4_3:-66580441 None:intergenic
AAGGATTACAACAGTTGGGA+TGG 0.542099 4_3:+66580147 Msa0657110:CDS
CTTATACTAAGACGTTTACT+GGG 0.544140 4_3:+66577113 Msa0657110:CDS
AACAGAACAATCATACAGTC+AGG 0.545022 4_3:-66580707 None:intergenic
GAGGGAAATGGAGCTCAGTA+AGG 0.546083 4_3:+66578515 Msa0657110:CDS
CAAGAACAAGGAGATGGTCT+GGG 0.548685 4_3:-66575754 None:intergenic
TGGAGGAAACTGAGGGCCAT+CGG 0.548884 4_3:-66579939 None:intergenic
TAGCTTGAGCTCTAAGGCCC+TGG 0.549577 4_3:-66575676 None:intergenic
GGTGGCGCACATCCTCGATA+AGG 0.551809 4_3:+66578493 Msa0657110:CDS
TGATCGTCAAAGAAAGAGGA+TGG 0.554441 4_3:-66575485 None:intergenic
TTTCTGGCCCACTCTTTAGG+AGG 0.557270 4_3:+66577336 Msa0657110:CDS
TGGTCTGTTGGGTTTACCAT+CGG 0.559958 4_3:-66578175 None:intergenic
TGTTGGGTTTACCATCGGTA+AGG 0.561909 4_3:-66578170 None:intergenic
CTCCATTTCCCTCCTTATCG+AGG 0.562222 4_3:-66578505 None:intergenic
AAATTAGGAAGTTCTTTCCA+AGG 0.565004 4_3:-66576612 None:intergenic
TGCCCTGCAGTCCCTTCCGA+TGG 0.565321 4_3:+66579923 Msa0657110:CDS
CCAACAAATAAAGGAGCCAT+AGG 0.566742 4_3:-66578126 None:intergenic
TCAAGACATTTAGAAGAAGT+AGG 0.571095 4_3:+66580655 Msa0657110:three_prime_UTR
GATCTTGCACACAGAACGGC+AGG 0.571400 4_3:+66577426 Msa0657110:CDS
GAAACTGAGGGCCATCGGAA+GGG 0.573496 4_3:-66579934 None:intergenic
ATTCAACATCAACCACGTGC+TGG 0.573595 4_3:-66579898 None:intergenic
AAGTTAAGTGCCATATATGG+AGG 0.575042 4_3:+66575054 Msa0657110:five_prime_UTR
AATGAATGGTTTCACAATGC+TGG 0.576009 4_3:+66580319 Msa0657110:CDS
TTTACTGGGATTGATGGAGC+AGG 0.577171 4_3:+66577127 Msa0657110:CDS
GGCGCACATCCTCGATAAGG+AGG 0.577833 4_3:+66578496 Msa0657110:CDS
GTAGTGGCAACATTGTGCAT+TGG 0.578419 4_3:+66575420 Msa0657110:five_prime_UTR
ACTGCTTCTGGAGGAAACTG+AGG 0.578708 4_3:-66579947 None:intergenic
TATATAATTTCACTGTGCCT+GGG 0.580640 4_3:+66580424 Msa0657110:three_prime_UTR
CAAATAAGCCTCCTAAAGAG+TGG 0.584169 4_3:-66577344 None:intergenic
AGTCAGTTGTTCCTTACCGA+TGG 0.586972 4_3:+66578159 Msa0657110:CDS
CTCCACTGATCCTAGAGTAG+TGG 0.588673 4_3:+66575404 Msa0657110:five_prime_UTR
GCCTATCCAATCAGAAGTGT+AGG 0.589044 4_3:+66575364 Msa0657110:intron
GACTTGATAAATGCAACAGA+AGG 0.589520 4_3:+66574690 Msa0657110:five_prime_UTR
GCCATTCTCAACAGAAGAGG+TGG 0.592717 4_3:-66578195 None:intergenic
TTTCCTCTTACACCAAGATG+TGG 0.596892 4_3:-66577528 None:intergenic
AAATAAGCCTCCTAAAGAGT+GGG 0.606229 4_3:-66577343 None:intergenic
TCCAGAAGCAGTGAAAGCAA+AGG 0.606566 4_3:+66579958 Msa0657110:CDS
CCATCTAAAGATTGGCGAGG+AGG 0.609081 4_3:-66579872 None:intergenic
TGTGTGCAAGATCACCAGGT+TGG 0.609908 4_3:-66577416 None:intergenic
TGCCACTACTCTAGGATCAG+TGG 0.611256 4_3:-66575406 None:intergenic
GTTCTGTGTGCAAGATCACC+AGG 0.612896 4_3:-66577420 None:intergenic
TGGTGATCTTGCACACAGAA+CGG 0.618484 4_3:+66577422 Msa0657110:CDS
TGTAGGAGTAATTGCTCATG+TGG 0.621038 4_3:+66580342 Msa0657110:CDS
GATGGGAGCTCTACAGCACT+GGG 0.625289 4_3:-66575081 None:intergenic
TGGTTTCACAATGCTGGTGT+AGG 0.625663 4_3:+66580325 Msa0657110:CDS
ATGTTGTTATGAGCAAAGAA+AGG 0.626830 4_3:-66580206 None:intergenic
AAACAGTGGACAGAGACACC+AGG 0.629287 4_3:+66575658 Msa0657110:five_prime_UTR
CTGCTTCTGGAGGAAACTGA+GGG 0.630303 4_3:-66579946 None:intergenic
GAAGCCATTCTCAACAGAAG+AGG 0.632448 4_3:-66578198 None:intergenic
CATGAACAAGAACAAGGAGA+TGG 0.634338 4_3:-66575760 None:intergenic
AGGATGGAGGAAGCAAGTCA+GGG 0.636804 4_3:-66575469 None:intergenic
AGTTAAGTGCCATATATGGA+GGG 0.638283 4_3:+66575055 Msa0657110:five_prime_UTR
AACAGTGGACAGAGACACCA+GGG 0.646612 4_3:+66575659 Msa0657110:five_prime_UTR
TGTTACTGTAGATCTGCACT+TGG 0.649162 4_3:+66578311 Msa0657110:intron
TTGATATAGATATGGTTGGG+TGG 0.653394 4_3:+66578475 Msa0657110:intron
GAATATCATGAAATTGTCGA+AGG 0.657213 4_3:+66580019 Msa0657110:CDS
ACCTATAATAAGGACCAACC+TGG 0.658865 4_3:+66577402 Msa0657110:CDS
ACTTTGGCAGGTACAAACAG+TGG 0.662745 4_3:+66575644 Msa0657110:five_prime_UTR
GCGCACATCCTCGATAAGGA+GGG 0.667292 4_3:+66578497 Msa0657110:CDS
AAGTCTAAAGCACCATCGTG+TGG 0.670150 4_3:-66574672 None:intergenic
AGATGCCATGAACAAGAACA+AGG 0.674157 4_3:-66575766 None:intergenic
TATCCATCTAAAGATTGGCG+AGG 0.684476 4_3:-66579875 None:intergenic
ATGGAGGAAGCAAGTCAGGG+AGG 0.684939 4_3:-66575466 None:intergenic
TCGTCAAAGAAAGAGGATGG+AGG 0.695565 4_3:-66575482 None:intergenic
TAGTCAAATCAACCACACGA+TGG 0.724255 4_3:+66574660 None:intergenic
GCCTGATACCCAGAAAACTG+TGG 0.752710 4_3:+66579997 Msa0657110:CDS
TTTAGATGGATACCAGCACG+TGG 0.761315 4_3:+66579886 Msa0657110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAAACAAATAATGTTT+TGG + chr4_3:66574977-66574996 Msa0657110:five_prime_UTR 10.0%
!!! TCATTTTATAAAAGTAATAT+AGG + chr4_3:66576013-66576032 Msa0657110:intron 10.0%
!!! AGTGATTTTTTTTTTTTTTT+TGG + chr4_3:66576694-66576713 Msa0657110:intron 10.0%
!! TTACAACTAAAATTTATATA+TGG - chr4_3:66577603-66577622 None:intergenic 10.0%
!!! GTATAATTTAAATTTTGTTA+GGG - chr4_3:66577920-66577939 None:intergenic 10.0%
!!! AGTATAATTTAAATTTTGTT+AGG - chr4_3:66577921-66577940 None:intergenic 10.0%
!! TAACAAAATTTAAATTATAC+TGG + chr4_3:66577920-66577939 Msa0657110:intron 10.0%
!! AATTTATACTAAAAATTTAC+TGG + chr4_3:66578019-66578038 Msa0657110:intron 10.0%
!!! GTTTATTTAACTAATTTTAA+AGG - chr4_3:66579576-66579595 None:intergenic 10.0%
!! ACATTATTTGTTTAAATTGA+AGG - chr4_3:66574975-66574994 None:intergenic 15.0%
!! TGAAATTAAAGACAAAAAAA+TGG - chr4_3:66576808-66576827 None:intergenic 15.0%
!!! ATTGTTATTTTAAATAGCTT+AGG - chr4_3:66576980-66576999 None:intergenic 15.0%
!! ATTGAAATTTCTCTAATTAT+TGG - chr4_3:66577871-66577890 None:intergenic 15.0%
!! TGAATTTCAATATGTAATTA+CGG - chr4_3:66579399-66579418 None:intergenic 15.0%
!! TTAGTTAAATAAACAAATGA+TGG + chr4_3:66579582-66579601 Msa0657110:intron 15.0%
!!! AAAATTCAGTCTTTTATTTT+AGG + chr4_3:66580476-66580495 Msa0657110:three_prime_UTR 15.0%
!!! TTGATATATCTCTTGATTTT+TGG + chr4_3:66574757-66574776 Msa0657110:five_prime_UTR 20.0%
!!! TGATATATCTCTTGATTTTT+GGG + chr4_3:66574758-66574777 Msa0657110:five_prime_UTR 20.0%
!!! AGTATCTATAGTTCTTTTTT+GGG - chr4_3:66574888-66574907 None:intergenic 20.0%
!!! AAGTATCTATAGTTCTTTTT+TGG - chr4_3:66574889-66574908 None:intergenic 20.0%
!!! TTAAACAAATAATGTTTTGG+TGG + chr4_3:66574980-66574999 Msa0657110:five_prime_UTR 20.0%
!! TAACTTTACAATCATTTCTA+CGG - chr4_3:66575040-66575059 None:intergenic 20.0%
!! TTTCTTTATAGATATGCAAA+GGG - chr4_3:66575133-66575152 None:intergenic 20.0%
!!! TTTTCTTTATAGATATGCAA+AGG - chr4_3:66575134-66575153 None:intergenic 20.0%
!!! AATAGATAGAAATTTTACAC+TGG - chr4_3:66575253-66575272 None:intergenic 20.0%
!! TTTATGATTGACAAATAAAC+TGG - chr4_3:66575987-66576006 None:intergenic 20.0%
!! ATTATTGAATTATGAGATAG+TGG - chr4_3:66576443-66576462 None:intergenic 20.0%
!! TAACAAACAGAAAAAGAAAT+AGG - chr4_3:66576475-66576494 None:intergenic 20.0%
!! AAATGTACTAACCATAAATT+AGG - chr4_3:66576630-66576649 None:intergenic 20.0%
!!! TTTTTTTTTTTGGTAAAGCA+TGG + chr4_3:66576704-66576723 Msa0657110:intron 20.0%
!!! AATGTTTTGGAATTTTTCTT+TGG + chr4_3:66577009-66577028 Msa0657110:intron 20.0%
!!! TTATTTCCTTTTATCAAAAC+AGG + chr4_3:66577269-66577288 Msa0657110:intron 20.0%
!! GCTAAAGTAATAAAATTGAT+TGG - chr4_3:66577504-66577523 None:intergenic 20.0%
!! TAATTAGAGAAATTTCAATC+AGG + chr4_3:66577872-66577891 Msa0657110:intron 20.0%
!! TAAAGGATTAATTGAAAAAG+AGG - chr4_3:66578277-66578296 None:intergenic 20.0%
!! TAAAGAAATTACCAAAATTG+AGG - chr4_3:66578453-66578472 None:intergenic 20.0%
!!! TCTTTAACTTGATATAGATA+TGG + chr4_3:66578467-66578486 Msa0657110:intron 20.0%
!! ATCTTACATATGTTAAATAC+TGG - chr4_3:66578592-66578611 None:intergenic 20.0%
!! ATCATAGAGAAATTATATAG+TGG - chr4_3:66578937-66578956 None:intergenic 20.0%
!!! AACTAATTTTAAAGGTTTTC+TGG - chr4_3:66579568-66579587 None:intergenic 20.0%
!! CGAAACTATTAATATAGAAA+TGG + chr4_3:66579776-66579795 Msa0657110:intron 20.0%
!!! TGATTGTTCTGTTTTTTTTA+AGG + chr4_3:66580717-66580736 Msa0657110:three_prime_UTR 20.0%
!!! GTATCTATAGTTCTTTTTTG+GGG - chr4_3:66574887-66574906 None:intergenic 25.0%
! AACTTTACAATCATTTCTAC+GGG - chr4_3:66575039-66575058 None:intergenic 25.0%
! CTATTAGTAGATATATGTCT+TGG + chr4_3:66575268-66575287 Msa0657110:intron 25.0%
! CTATTAAACTAGTTGTTACT+AGG - chr4_3:66575537-66575556 None:intergenic 25.0%
! CGTTAATTCGTTATCATAAT+TGG - chr4_3:66575561-66575580 None:intergenic 25.0%
! ATCCAAGTATGAATAACATT+TGG + chr4_3:66575598-66575617 Msa0657110:five_prime_UTR 25.0%
!!! ATAACATTTGGCTTTCATTA+AGG + chr4_3:66575610-66575629 Msa0657110:five_prime_UTR 25.0%
!! GTATGCATAAAAACTTTTAC+TGG + chr4_3:66575880-66575899 Msa0657110:intron 25.0%
! AGTTTAACTGAAAAGAGTAA+TGG + chr4_3:66575927-66575946 Msa0657110:intron 25.0%
! TGATACTGTTTATGAATAGT+TGG + chr4_3:66575953-66575972 Msa0657110:intron 25.0%
! ATTGACAAATAAACTGGAAA+GGG - chr4_3:66575981-66576000 None:intergenic 25.0%
! GAAATAAATGTATGTACGTA+TGG - chr4_3:66576096-66576115 None:intergenic 25.0%
!!! GTACATACATTTATTTCTGT+TGG + chr4_3:66576099-66576118 Msa0657110:intron 25.0%
!!! ATTTATTTCTGTTGGTCATT+TGG + chr4_3:66576107-66576126 Msa0657110:intron 25.0%
! TGTACATCTGTAACATTTAA+TGG + chr4_3:66576764-66576783 Msa0657110:intron 25.0%
!!! TTTTTCTGGTAGTTATGATT+TGG + chr4_3:66576842-66576861 Msa0657110:intron 25.0%
!! CAATAGTTGTCTTAATGTTT+TGG + chr4_3:66576996-66577015 Msa0657110:intron 25.0%
!! TAATTTTACGTTCATTGAAG+AGG - chr4_3:66577048-66577067 None:intergenic 25.0%
! TGAACGTAAAATTAATTGTC+TGG + chr4_3:66577054-66577073 Msa0657110:intron 25.0%
! AGATTTGTGTGTTAAATGTT+TGG + chr4_3:66577187-66577206 Msa0657110:intron 25.0%
! AAAGAATCAGAACTGAAATT+GGG - chr4_3:66577216-66577235 None:intergenic 25.0%
! AAAAGAATCAGAACTGAAAT+TGG - chr4_3:66577217-66577236 None:intergenic 25.0%
! TATAGGTATCATGTGAATAA+AGG - chr4_3:66577389-66577408 None:intergenic 25.0%
! TTCACATGATACCTATAATA+AGG + chr4_3:66577392-66577411 Msa0657110:CDS 25.0%
! ATATATGGCAAAAAAACCAT+AGG - chr4_3:66577588-66577607 None:intergenic 25.0%
!!! TTGTAAATGAGTGTTGTTTA+TGG + chr4_3:66577617-66577636 Msa0657110:intron 25.0%
! TGATAATATTCAAACTGTCT+TGG + chr4_3:66577659-66577678 Msa0657110:intron 25.0%
! TAACTTGATATAGATATGGT+TGG + chr4_3:66578471-66578490 Msa0657110:intron 25.0%
! AACTTGATATAGATATGGTT+GGG + chr4_3:66578472-66578491 Msa0657110:intron 25.0%
! AATGATTGACATCTATTCAA+TGG - chr4_3:66578815-66578834 None:intergenic 25.0%
! GATCCTCGTAATTTATAATT+AGG + chr4_3:66579055-66579074 Msa0657110:intron 25.0%
! TGACCTAATTATAAATTACG+AGG - chr4_3:66579061-66579080 None:intergenic 25.0%
! AAAAGAAAAATGTAGTTGCA+AGG - chr4_3:66579164-66579183 None:intergenic 25.0%
! AAATGTAAAGTGAGGAAATA+TGG - chr4_3:66579193-66579212 None:intergenic 25.0%
! TATCAAGAAGGGTTAATAAT+TGG + chr4_3:66579327-66579346 Msa0657110:intron 25.0%
! TTTCAATATGTAATTACGGA+GGG - chr4_3:66579395-66579414 None:intergenic 25.0%
! ATTTCAATATGTAATTACGG+AGG - chr4_3:66579396-66579415 None:intergenic 25.0%
! TGGATCAAATCAATTAATAC+TGG + chr4_3:66579602-66579621 Msa0657110:intron 25.0%
!!! ATGAAGATTTGTTAAGTGTT+GGG + chr4_3:66579697-66579716 Msa0657110:intron 25.0%
! AGAATGCTTATATGTTACTA+GGG + chr4_3:66579822-66579841 Msa0657110:intron 25.0%
!! AATTTCAGGTGAAAAATGAA+TGG + chr4_3:66580305-66580324 Msa0657110:intron 25.0%
!!! ACGAAGTGTTGTAAATATAT+CGG - chr4_3:66580507-66580526 None:intergenic 25.0%
!! CATGTTAAGTGACTTTTAAA+TGG + chr4_3:66580765-66580784 Msa0657110:three_prime_UTR 25.0%
! GTCCTTGAATTATCAAAAAT+CGG + chr4_3:66580805-66580824 Msa0657110:three_prime_UTR 25.0%
!!! GTGTCATTTTATCATGCAAT+TGG + chr4_3:66574788-66574807 Msa0657110:five_prime_UTR 30.0%
TTGTTTAAATTGAAGGCAGT+GGG - chr4_3:66574968-66574987 None:intergenic 30.0%
TTTGTTTAAATTGAAGGCAG+TGG - chr4_3:66574969-66574988 None:intergenic 30.0%
GTAAAGTTAAGTGCCATATA+TGG + chr4_3:66575051-66575070 Msa0657110:five_prime_UTR 30.0%
GAAAAGACAAAATCTACTGT+AGG + chr4_3:66575149-66575168 Msa0657110:intron 30.0%
TTAGTAGATATATGTCTTGG+TGG + chr4_3:66575271-66575290 Msa0657110:intron 30.0%
!!! GAAACGCTTTTTTACAGTTA+TGG + chr4_3:66575443-66575462 Msa0657110:five_prime_UTR 30.0%
AAAATGATCGTCAAAGAAAG+AGG - chr4_3:66575492-66575511 None:intergenic 30.0%
AGCCAAATGTTATTCATACT+TGG - chr4_3:66575603-66575622 None:intergenic 30.0%
AGAAATAGAGTTTCCATTAG+TGG - chr4_3:66575711-66575730 None:intergenic 30.0%
AAATTGTTGTGCTGAATTGT+GGG + chr4_3:66575835-66575854 Msa0657110:intron 30.0%
GATTGACAAATAAACTGGAA+AGG - chr4_3:66575982-66576001 None:intergenic 30.0%
AAGTGTGAAAAGTCAAACTT+TGG + chr4_3:66576055-66576074 Msa0657110:intron 30.0%
AGTGTGAAAAGTCAAACTTT+GGG + chr4_3:66576056-66576075 Msa0657110:intron 30.0%
TTGTTCTGTAGTTTAGTGAT+AGG + chr4_3:66576133-66576152 Msa0657110:intron 30.0%
AAATTAGGAAGTTCTTTCCA+AGG - chr4_3:66576615-66576634 None:intergenic 30.0%
GGAAAGAACTTCCTAATTTA+TGG + chr4_3:66576616-66576635 Msa0657110:CDS 30.0%
TTTGGTAAAGCATGGATATA+AGG + chr4_3:66576712-66576731 Msa0657110:intron 30.0%
ACATCTGTAACATTTAATGG+AGG + chr4_3:66576767-66576786 Msa0657110:intron 30.0%
!! GTCAGTAATTCAACTTTTTC+TGG + chr4_3:66576828-66576847 Msa0657110:intron 30.0%
GGAAAAGAAGTTAAAGACAA+AGG - chr4_3:66576908-66576927 None:intergenic 30.0%
! AAAGGTCTATTTGTGTTGTT+TGG + chr4_3:66576943-66576962 Msa0657110:intron 30.0%
CTTATACTAAGACGTTTACT+GGG + chr4_3:66577113-66577132 Msa0657110:CDS 30.0%
!!! GCAATACCTGTTTTGATAAA+AGG - chr4_3:66577278-66577297 None:intergenic 30.0%
TTTCGAAAAGCTTGTACTTT+GGG - chr4_3:66577457-66577476 None:intergenic 30.0%
ACCATATAAATATGTGCCTA+TGG + chr4_3:66577569-66577588 Msa0657110:intron 30.0%
ACCATAGGCACATATTTATA+TGG - chr4_3:66577573-66577592 None:intergenic 30.0%
!! TAAATGAGTGTTGTTTATGG+TGG + chr4_3:66577620-66577639 Msa0657110:intron 30.0%
CTTACATAATACTGCCAATA+TGG + chr4_3:66577712-66577731 Msa0657110:intron 30.0%
!! ATTTTGTTAGGGTTTGTTTG+TGG - chr4_3:66577909-66577928 None:intergenic 30.0%
!! ATCAACATCATTTTCAAGAC+TGG - chr4_3:66577958-66577977 None:intergenic 30.0%
AATATGAAGAGTTTCAACGA+AGG - chr4_3:66577995-66578014 None:intergenic 30.0%
TGGAAAATTTCTGTAAGCAA+AGG + chr4_3:66578233-66578252 Msa0657110:intron 30.0%
ACACTAGATCTTGTAAGTAA+AGG - chr4_3:66578294-66578313 None:intergenic 30.0%
AACAAAGAAAACATACTGAG+AGG - chr4_3:66578385-66578404 None:intergenic 30.0%
! GGTGTATCAATGATAACTTT+TGG + chr4_3:66578418-66578437 Msa0657110:intron 30.0%
AATATGATGATTTCTCCCTT+TGG + chr4_3:66578540-66578559 Msa0657110:intron 30.0%
ATATGATGATTTCTCCCTTT+GGG + chr4_3:66578541-66578560 Msa0657110:intron 30.0%
! TATGTAACTAGCACTAGTTT+AGG - chr4_3:66578774-66578793 None:intergenic 30.0%
!! TTGGTTCTATAATGTTGTAC+TGG + chr4_3:66578982-66579001 Msa0657110:intron 30.0%
! TGGTTCTATAATGTTGTACT+GGG + chr4_3:66578983-66579002 Msa0657110:intron 30.0%
!! AAAGGCATAATTTTGAGCTA+TGG - chr4_3:66579133-66579152 None:intergenic 30.0%
AAGAGAATGAAAGTTATCCA+TGG - chr4_3:66579265-66579284 None:intergenic 30.0%
TATTAACCCTTCTTGATAGA+AGG - chr4_3:66579325-66579344 None:intergenic 30.0%
AATTGCAATACTAGTGTTCT+CGG + chr4_3:66579536-66579555 Msa0657110:intron 30.0%
TGGAACAAAAATATTGTCAG+TGG + chr4_3:66579622-66579641 Msa0657110:intron 30.0%
!! GATGAAGATTTGTTAAGTGT+TGG + chr4_3:66579696-66579715 Msa0657110:intron 30.0%
GAAGATTCCATACGAAAATT+TGG + chr4_3:66579750-66579769 Msa0657110:intron 30.0%
GAAATGGAAGATGTTTGAAA+TGG + chr4_3:66579792-66579811 Msa0657110:intron 30.0%
GAGAATGCTTATATGTTACT+AGG + chr4_3:66579821-66579840 Msa0657110:intron 30.0%
! ATGATATTCCACAGTTTTCT+GGG - chr4_3:66580008-66580027 None:intergenic 30.0%
GAATATCATGAAATTGTCGA+AGG + chr4_3:66580019-66580038 Msa0657110:CDS 30.0%
TCTGTTAAGAAGATACATAG+TGG - chr4_3:66580116-66580135 None:intergenic 30.0%
ACTATGTATCTTCTTAACAG+AGG + chr4_3:66580115-66580134 Msa0657110:intron 30.0%
ATTCAAGGATTACAACAGTT+GGG + chr4_3:66580143-66580162 Msa0657110:CDS 30.0%
ATGTTGTTATGAGCAAAGAA+AGG - chr4_3:66580209-66580228 None:intergenic 30.0%
ACAAGAAACATCGTCAATAT+TGG + chr4_3:66580381-66580400 Msa0657110:CDS 30.0%
TATATAATTTCACTGTGCCT+GGG + chr4_3:66580424-66580443 Msa0657110:three_prime_UTR 30.0%
TCAAGACATTTAGAAGAAGT+AGG + chr4_3:66580655-66580674 Msa0657110:three_prime_UTR 30.0%
ATAATTCAAGGACGAATTTG+AGG - chr4_3:66580798-66580817 None:intergenic 30.0%
GACTTGATAAATGCAACAGA+AGG + chr4_3:66574690-66574709 Msa0657110:five_prime_UTR 35.0%
ATTGGAAATCCCATATCTCT+AGG + chr4_3:66574806-66574825 Msa0657110:five_prime_UTR 35.0%
CCAATCATACCTAGAGATAT+GGG - chr4_3:66574818-66574837 None:intergenic 35.0%
TCCAATCATACCTAGAGATA+TGG - chr4_3:66574819-66574838 None:intergenic 35.0%
GGTATGATTGGATTTCTGTT+AGG + chr4_3:66574827-66574846 Msa0657110:five_prime_UTR 35.0%
AAGTTAAGTGCCATATATGG+AGG + chr4_3:66575054-66575073 Msa0657110:five_prime_UTR 35.0%
AGTTAAGTGCCATATATGGA+GGG + chr4_3:66575055-66575074 Msa0657110:five_prime_UTR 35.0%
CAAAATCCTACACTTCTGAT+TGG - chr4_3:66575373-66575392 None:intergenic 35.0%
TAACGAATTAACGACCATAC+TGG + chr4_3:66575568-66575587 Msa0657110:five_prime_UTR 35.0%
CTTGGATTATTAAGCCAGTA+TGG - chr4_3:66575585-66575604 None:intergenic 35.0%
!! TGGAAACTCTATTTCTAGCA+TGG + chr4_3:66575715-66575734 Msa0657110:CDS 35.0%
!! GGAAACTCTATTTCTAGCAT+GGG + chr4_3:66575716-66575735 Msa0657110:CDS 35.0%
! TTTCTAGCATGGGAAATTCT+AGG + chr4_3:66575726-66575745 Msa0657110:CDS 35.0%
CAAATTGTTGTGCTGAATTG+TGG + chr4_3:66575834-66575853 Msa0657110:intron 35.0%
GTGTGAAAAGTCAAACTTTG+GGG + chr4_3:66576057-66576076 Msa0657110:intron 35.0%
TTAGTGATAGGAGTCTGTAT+AGG + chr4_3:66576145-66576164 Msa0657110:intron 35.0%
AGGAAAAAGAAGTAAGCAAG+TGG + chr4_3:66576237-66576256 Msa0657110:intron 35.0%
GGAAAAAGAAGTAAGCAAGT+GGG + chr4_3:66576238-66576257 Msa0657110:intron 35.0%
GAAAAAGAAGTAAGCAAGTG+GGG + chr4_3:66576239-66576258 Msa0657110:intron 35.0%
TGAGTTCGTTAGAACCTTTA+CGG + chr4_3:66576346-66576365 Msa0657110:intron 35.0%
! GAAACCTTTTCTTCTTACTG+AGG + chr4_3:66576382-66576401 Msa0657110:intron 35.0%
! TTTTTACTGATACAGCACAG+CGG + chr4_3:66576555-66576574 Msa0657110:intron 35.0%
AACATAACATAGAGAACCAC+AGG - chr4_3:66576657-66576676 None:intergenic 35.0%
TGTGGTTCTCTATGTTATGT+TGG + chr4_3:66576656-66576675 Msa0657110:intron 35.0%
AGCATGGATATAAGGTAACA+CGG + chr4_3:66576720-66576739 Msa0657110:intron 35.0%
!! GTCTTTAACTTCTTTTCCTG+AGG + chr4_3:66576910-66576929 Msa0657110:intron 35.0%
TCCTGAGGTAATGCATTAAA+AGG + chr4_3:66576925-66576944 Msa0657110:intron 35.0%
! ACCTTTTAATGCATTACCTC+AGG - chr4_3:66576929-66576948 None:intergenic 35.0%
GCTTATACTAAGACGTTTAC+TGG + chr4_3:66577112-66577131 Msa0657110:CDS 35.0%
TCTGAAAAGAATCTCCTTTC+TGG + chr4_3:66577320-66577339 Msa0657110:CDS 35.0%
AAATAAGCCTCCTAAAGAGT+GGG - chr4_3:66577346-66577365 None:intergenic 35.0%
CTTTCGAAAAGCTTGTACTT+TGG - chr4_3:66577458-66577477 None:intergenic 35.0%
! CAAAGTACAAGCTTTTCGAA+AGG + chr4_3:66577456-66577475 Msa0657110:CDS 35.0%
! ATCTTGGTGTAAGAGGAAAA+AGG + chr4_3:66577532-66577551 Msa0657110:CDS 35.0%
!! TTCTCTGTGTTGATGATTCA+CGG + chr4_3:66577682-66577701 Msa0657110:intron 35.0%
ACCAATTGCGGATCTATTAT+AGG + chr4_3:66577735-66577754 Msa0657110:intron 35.0%
CTAATGAACTTCTTGTCACA+TGG + chr4_3:66577800-66577819 Msa0657110:intron 35.0%
!! CAGCAAGCTTTTCTAGTATT+GGG - chr4_3:66578104-66578123 None:intergenic 35.0%
TTATCATTGATACACCTAGC+AGG - chr4_3:66578414-66578433 None:intergenic 35.0%
TTGATATAGATATGGTTGGG+TGG + chr4_3:66578475-66578494 Msa0657110:intron 35.0%
ATTTCTCTATGATGAAGTGC+TGG + chr4_3:66578944-66578963 Msa0657110:intron 35.0%
TTATCACAGAATAGCGTCAT+CGG + chr4_3:66579033-66579052 Msa0657110:intron 35.0%
TGTAAAGTGAGGAAATATGG+TGG - chr4_3:66579190-66579209 None:intergenic 35.0%
! AGGGTACTAAATGTAAAGTG+AGG - chr4_3:66579201-66579220 None:intergenic 35.0%
ACTTTACATTTAGTACCCTG+AGG + chr4_3:66579202-66579221 Msa0657110:intron 35.0%
AGAATGAAAGTTATCCATGG+AGG - chr4_3:66579262-66579281 None:intergenic 35.0%
ACTATGTTAACCCAGTTCAT+TGG + chr4_3:66579351-66579370 Msa0657110:intron 35.0%
! TGCTTTCATTTTATGCCAAC+AGG - chr4_3:66579454-66579473 None:intergenic 35.0%
!! GTGCTATTTATGCATCTTGT+TGG + chr4_3:66579644-66579663 Msa0657110:intron 35.0%
TGTTGGGAAAGAGATAATGA+TGG + chr4_3:66579713-66579732 Msa0657110:intron 35.0%
TATGGAATCTTCCTTGAACA+CGG - chr4_3:66579742-66579761 None:intergenic 35.0%
GATTCCATACGAAAATTTGG+AGG + chr4_3:66579753-66579772 Msa0657110:intron 35.0%
! CATGATATTCCACAGTTTTC+TGG - chr4_3:66580009-66580028 None:intergenic 35.0%
!! AAGATACATAGTGGCTTTAG+TGG - chr4_3:66580107-66580126 None:intergenic 35.0%
TTAACAGAGGAGATGATTCA+AGG + chr4_3:66580128-66580147 Msa0657110:intron 35.0%
GATTCAAGGATTACAACAGT+TGG + chr4_3:66580142-66580161 Msa0657110:CDS 35.0%
! TCAGCTTTCACTCATCATTT+TGG + chr4_3:66580183-66580202 Msa0657110:CDS 35.0%
CATCATCTGAGAGATCAATA+AGG - chr4_3:66580247-66580266 None:intergenic 35.0%
CACAAGAACTTCTCAATTTC+AGG + chr4_3:66580291-66580310 Msa0657110:intron 35.0%
AATGAATGGTTTCACAATGC+TGG + chr4_3:66580319-66580338 Msa0657110:CDS 35.0%
GTATATAATTTCACTGTGCC+TGG + chr4_3:66580423-66580442 Msa0657110:three_prime_UTR 35.0%
AACAGAACAATCATACAGTC+AGG - chr4_3:66580710-66580729 None:intergenic 35.0%
!! GGCCGATTTTTGATAATTCA+AGG - chr4_3:66580810-66580829 None:intergenic 35.0%
CCCATATCTCTAGGTATGAT+TGG + chr4_3:66574815-66574834 Msa0657110:five_prime_UTR 40.0%
ATCAAACTCCTGCAAATGCA+AGG - chr4_3:66575185-66575204 None:intergenic 40.0%
GTAATAGTTTCCGTGCGATT+GGG - chr4_3:66575229-66575248 None:intergenic 40.0%
TCCTACACTTCTGATTGGAT+AGG - chr4_3:66575368-66575387 None:intergenic 40.0%
TAGTGGCAACATTGTGCATT+GGG + chr4_3:66575421-66575440 Msa0657110:five_prime_UTR 40.0%
TGATCGTCAAAGAAAGAGGA+TGG - chr4_3:66575488-66575507 None:intergenic 40.0%
!! CATTTGGCTTTCATTAAGGC+TGG + chr4_3:66575614-66575633 Msa0657110:five_prime_UTR 40.0%
AACTCATAGCTTGAGCTCTA+AGG - chr4_3:66575685-66575704 None:intergenic 40.0%
GCTATGAGTTCTACCACTAA+TGG + chr4_3:66575695-66575714 Msa0657110:exon 40.0%
CATGAACAAGAACAAGGAGA+TGG - chr4_3:66575763-66575782 None:intergenic 40.0%
CATCTCCTTGTTCTTGTTCA+TGG + chr4_3:66575761-66575780 Msa0657110:CDS 40.0%
AGATGCCATGAACAAGAACA+AGG - chr4_3:66575769-66575788 None:intergenic 40.0%
TGTTCTTGTTCATGGCATCT+TGG + chr4_3:66575769-66575788 Msa0657110:CDS 40.0%
!! AAAGTCAAACTTTGGGGCAA+TGG + chr4_3:66576063-66576082 Msa0657110:intron 40.0%
CTATCAACCCTCCAAACTTT+GGG - chr4_3:66576216-66576235 None:intergenic 40.0%
TCTATCAACCCTCCAAACTT+TGG - chr4_3:66576217-66576236 None:intergenic 40.0%
!! AAGTTTGGAGGGTTGATAGA+AGG + chr4_3:66576217-66576236 Msa0657110:intron 40.0%
CACACACACTCTCTTATTGA+GGG - chr4_3:66576304-66576323 None:intergenic 40.0%
TCACACACACTCTCTTATTG+AGG - chr4_3:66576305-66576324 None:intergenic 40.0%
! TCAATAAGAGAGTGTGTGTG+AGG + chr4_3:66576304-66576323 Msa0657110:intron 40.0%
! CAATAAGAGAGTGTGTGTGA+GGG + chr4_3:66576305-66576324 Msa0657110:intron 40.0%
! AATAAGAGAGTGTGTGTGAG+GGG + chr4_3:66576306-66576325 Msa0657110:intron 40.0%
TCGTTAGAACCTTTACGGTT+AGG + chr4_3:66576351-66576370 Msa0657110:intron 40.0%
AGCTCCTCAGTAAGAAGAAA+AGG - chr4_3:66576389-66576408 None:intergenic 40.0%
GTTAGTACATTTCTCACCTG+TGG + chr4_3:66576638-66576657 Msa0657110:intron 40.0%
AAGACGTTTACTGGGATTGA+TGG + chr4_3:66577121-66577140 Msa0657110:CDS 40.0%
CAAATAAGCCTCCTAAAGAG+TGG - chr4_3:66577347-66577366 None:intergenic 40.0%
ACCTATAATAAGGACCAACC+TGG + chr4_3:66577402-66577421 Msa0657110:CDS 40.0%
!! ACCAGGTTGGTCCTTATTAT+AGG - chr4_3:66577406-66577425 None:intergenic 40.0%
! AGTACAAGCTTTTCGAAAGG+AGG + chr4_3:66577459-66577478 Msa0657110:CDS 40.0%
! GTACAAGCTTTTCGAAAGGA+GGG + chr4_3:66577460-66577479 Msa0657110:CDS 40.0%
ACTTTAGCATCTCCACATCT+TGG + chr4_3:66577516-66577535 Msa0657110:CDS 40.0%
TTTCCTCTTACACCAAGATG+TGG - chr4_3:66577531-66577550 None:intergenic 40.0%
!! TGTGTTGATGATTCACGGTT+TGG + chr4_3:66577687-66577706 Msa0657110:intron 40.0%
GCCTATAATAGATCCGCAAT+TGG - chr4_3:66577739-66577758 None:intergenic 40.0%
GCATATGCTTTGCAAATGCA+AGG - chr4_3:66577769-66577788 None:intergenic 40.0%
TGCATTTGCAAAGCATATGC+TGG + chr4_3:66577769-66577788 Msa0657110:intron 40.0%
AACTTCAACCGTTGTGCTTA+GGG + chr4_3:66577827-66577846 Msa0657110:intron 40.0%
!! GCAGCAAGCTTTTCTAGTAT+TGG - chr4_3:66578105-66578124 None:intergenic 40.0%
CCAACAAATAAAGGAGCCAT+AGG - chr4_3:66578129-66578148 None:intergenic 40.0%
! CCTATGGCTCCTTTATTTGT+TGG + chr4_3:66578126-66578145 Msa0657110:CDS 40.0%
! TGGCTCCTTTATTTGTTGGT+CGG + chr4_3:66578130-66578149 Msa0657110:CDS 40.0%
ATGGCTTCTGATTGTGAAGA+TGG + chr4_3:66578213-66578232 Msa0657110:CDS 40.0%
TGTTACTGTAGATCTGCACT+TGG + chr4_3:66578311-66578330 Msa0657110:intron 40.0%
TCTTTGTTCTACAACCTGCT+AGG + chr4_3:66578397-66578416 Msa0657110:intron 40.0%
AAGTCACAAGACAACCCAAA+GGG - chr4_3:66578558-66578577 None:intergenic 40.0%
CAGCTTTGCACATAAGATCT+TGG + chr4_3:66578837-66578856 Msa0657110:intron 40.0%
AAGATCTTGGATCTGCTTTG+TGG + chr4_3:66578850-66578869 Msa0657110:intron 40.0%
TCTGTCAATTGAAGTCCACA+AGG + chr4_3:66578890-66578909 Msa0657110:intron 40.0%
CTGTCAATTGAAGTCCACAA+GGG + chr4_3:66578891-66578910 Msa0657110:intron 40.0%
GGGAGGTAGGTTATAGTATA+AGG + chr4_3:66578911-66578930 Msa0657110:intron 40.0%
!! AAGTGCTGGTCTATCTCTAT+GGG + chr4_3:66578958-66578977 Msa0657110:intron 40.0%
!! TAATGCGGTTTGTTGACAGA+GGG - chr4_3:66579232-66579251 None:intergenic 40.0%
AGGTAGTCCTTCTATCAAGA+AGG + chr4_3:66579315-66579334 Msa0657110:intron 40.0%
GGTAGTCCTTCTATCAAGAA+GGG + chr4_3:66579316-66579335 Msa0657110:intron 40.0%
GATTAGGCAACCAATGAACT+GGG - chr4_3:66579364-66579383 None:intergenic 40.0%
AGATTAGGCAACCAATGAAC+TGG - chr4_3:66579365-66579384 None:intergenic 40.0%
AATGCTACCACATGCATTCT+TGG - chr4_3:66579482-66579501 None:intergenic 40.0%
CGGGTTATGTGTTGTAAACT+TGG + chr4_3:66579674-66579693 Msa0657110:intron 40.0%
! TTCGCCTCCAAATTTTCGTA+TGG - chr4_3:66579760-66579779 None:intergenic 40.0%
TATCCATCTAAAGATTGGCG+AGG - chr4_3:66579878-66579897 None:intergenic 40.0%
GCTGGTATCCATCTAAAGAT+TGG - chr4_3:66579883-66579902 None:intergenic 40.0%
AAGGATTACAACAGTTGGGA+TGG + chr4_3:66580147-66580166 Msa0657110:CDS 40.0%
CATCTGAGAGATCAATAAGG+AGG - chr4_3:66580244-66580263 None:intergenic 40.0%
TGTAGGAGTAATTGCTCATG+TGG + chr4_3:66580342-66580361 Msa0657110:CDS 40.0%
GCGCACGCAAAAAAAATCAT+TGG - chr4_3:66580632-66580651 None:intergenic 40.0%
GCAAAATTCAGGGACGAATT+TGG - chr4_3:66580831-66580850 None:intergenic 40.0%
ATGGACGTCTGCAAAATTCA+GGG - chr4_3:66580841-66580860 None:intergenic 40.0%
!! GCAGTGGGTTAGTGTATGTT+AGG - chr4_3:66574953-66574972 None:intergenic 45.0%
TGTAGAGCTCCCATCATAGT+GGG + chr4_3:66575089-66575108 Msa0657110:intron 45.0%
TTCTTGGACCCCACTATGAT+GGG - chr4_3:66575101-66575120 None:intergenic 45.0%
TTTCTTGGACCCCACTATGA+TGG - chr4_3:66575102-66575121 None:intergenic 45.0%
! TCATAGTGGGGTCCAAGAAA+TGG + chr4_3:66575102-66575121 Msa0657110:intron 45.0%
CAAAGGGCTTCACCATTTCT+TGG - chr4_3:66575117-66575136 None:intergenic 45.0%
CAGTCTTACCTTGCATTTGC+AGG + chr4_3:66575174-66575193 Msa0657110:intron 45.0%
CGTAATAGTTTCCGTGCGAT+TGG - chr4_3:66575230-66575249 None:intergenic 45.0%
TACTATAGCCCCAACGACTA+TGG - chr4_3:66575301-66575320 None:intergenic 45.0%
ATAGTCGTTGGGGCTATAGT+AGG + chr4_3:66575300-66575319 Msa0657110:intron 45.0%
! GCCTATCCAATCAGAAGTGT+AGG + chr4_3:66575364-66575383 Msa0657110:intron 45.0%
CACAATGTTGCCACTACTCT+AGG - chr4_3:66575417-66575436 None:intergenic 45.0%
GTAGTGGCAACATTGTGCAT+TGG + chr4_3:66575420-66575439 Msa0657110:five_prime_UTR 45.0%
TCGTCAAAGAAAGAGGATGG+AGG - chr4_3:66575485-66575504 None:intergenic 45.0%
TAAGGCTGGCAGTTGAACTT+TGG + chr4_3:66575628-66575647 Msa0657110:five_prime_UTR 45.0%
ACTTTGGCAGGTACAAACAG+TGG + chr4_3:66575644-66575663 Msa0657110:five_prime_UTR 45.0%
CAAGAACAAGGAGATGGTCT+GGG - chr4_3:66575757-66575776 None:intergenic 45.0%
ACAAGAACAAGGAGATGGTC+TGG - chr4_3:66575758-66575777 None:intergenic 45.0%
TTGTTCATGGCATCTTGGCT+AGG + chr4_3:66575774-66575793 Msa0657110:CDS 45.0%
TATAGGCCTGAACCAGTAGA+AGG + chr4_3:66576162-66576181 Msa0657110:intron 45.0%
!! ACATCACCTTCTACTGGTTC+AGG - chr4_3:66576171-66576190 None:intergenic 45.0%
ACCAGTAGAAGGTGATGTGT+TGG + chr4_3:66576173-66576192 Msa0657110:intron 45.0%
ACCAACACATCACCTTCTAC+TGG - chr4_3:66576177-66576196 None:intergenic 45.0%
AGTAGAAGGTGATGTGTTGG+TGG + chr4_3:66576176-66576195 Msa0657110:intron 45.0%
! GTAGAAGGTGATGTGTTGGT+GGG + chr4_3:66576177-66576196 Msa0657110:intron 45.0%
GTAAGGAGAAGCCCAAAGTT+TGG + chr4_3:66576202-66576221 Msa0657110:intron 45.0%
AAGTAAGCAAGTGGGGACAA+AGG + chr4_3:66576246-66576265 Msa0657110:intron 45.0%
AGTAAGCAAGTGGGGACAAA+GGG + chr4_3:66576247-66576266 Msa0657110:intron 45.0%
TTACTGAGGAGCTTATGCTC+TGG + chr4_3:66576396-66576415 Msa0657110:intron 45.0%
TACTGAGGAGCTTATGCTCT+GGG + chr4_3:66576397-66576416 Msa0657110:intron 45.0%
! GAGCAAGAGTTTGATTTCGC+AGG - chr4_3:66576868-66576887 None:intergenic 45.0%
TTTACTGGGATTGATGGAGC+AGG + chr4_3:66577127-66577146 Msa0657110:CDS 45.0%
TGGTGATCTTGCACACAGAA+CGG + chr4_3:66577422-66577441 Msa0657110:CDS 45.0%
! TCTCCACATCTTGGTGTAAG+AGG + chr4_3:66577525-66577544 Msa0657110:CDS 45.0%
TGGTGTAAGAGGAAAAAGGC+AGG + chr4_3:66577536-66577555 Msa0657110:CDS 45.0%
CTGCCAATATGGACCAATTG+CGG + chr4_3:66577723-66577742 Msa0657110:intron 45.0%
GATCCGCAATTGGTCCATAT+TGG - chr4_3:66577729-66577748 None:intergenic 45.0%
CAACTTCAACCGTTGTGCTT+AGG + chr4_3:66577826-66577845 Msa0657110:intron 45.0%
TTATTGGAGCTGCTAGCGAA+GGG - chr4_3:66577855-66577874 None:intergenic 45.0%
ATTATTGGAGCTGCTAGCGA+AGG - chr4_3:66577856-66577875 None:intergenic 45.0%
TTTCCAGCTTCCATTTCTGC+TGG + chr4_3:66578074-66578093 Msa0657110:intron 45.0%
TTCCAGCTTCCATTTCTGCT+GGG + chr4_3:66578075-66578094 Msa0657110:intron 45.0%
!! AGAAAAGCTTGCTGCACCTA+TGG + chr4_3:66578110-66578129 Msa0657110:CDS 45.0%
CCAGTCCGACCAACAAATAA+AGG - chr4_3:66578138-66578157 None:intergenic 45.0%
! CCTTTATTTGTTGGTCGGAC+TGG + chr4_3:66578135-66578154 Msa0657110:CDS 45.0%
AGTCAGTTGTTCCTTACCGA+TGG + chr4_3:66578159-66578178 Msa0657110:CDS 45.0%
TGTTGGGTTTACCATCGGTA+AGG - chr4_3:66578173-66578192 None:intergenic 45.0%
TGGTCTGTTGGGTTTACCAT+CGG - chr4_3:66578178-66578197 None:intergenic 45.0%
AACAGAAGAGGTGGTCTGTT+GGG - chr4_3:66578189-66578208 None:intergenic 45.0%
ACCACCTCTTCTGTTGAGAA+TGG + chr4_3:66578194-66578213 Msa0657110:CDS 45.0%
GAAGCCATTCTCAACAGAAG+AGG - chr4_3:66578201-66578220 None:intergenic 45.0%
! GGCACTCTCTTCCTCAATTT+TGG + chr4_3:66578439-66578458 Msa0657110:intron 45.0%
ATCCTCGATAAGGAGGGAAA+TGG + chr4_3:66578503-66578522 Msa0657110:CDS 45.0%
CAAGTCACAAGACAACCCAA+AGG - chr4_3:66578559-66578578 None:intergenic 45.0%
ATCTTGGATCTGCTTTGTGG+TGG + chr4_3:66578853-66578872 Msa0657110:intron 45.0%
CTTCAATTGACAGACACCAG+TGG - chr4_3:66578884-66578903 None:intergenic 45.0%
TCAATTGAAGTCCACAAGGG+AGG + chr4_3:66578894-66578913 Msa0657110:intron 45.0%
ACTATAACCTACCTCCCTTG+TGG - chr4_3:66578908-66578927 None:intergenic 45.0%
!! GAAGTGCTGGTCTATCTCTA+TGG + chr4_3:66578957-66578976 Msa0657110:intron 45.0%
!! CTAATGCGGTTTGTTGACAG+AGG - chr4_3:66579233-66579252 None:intergenic 45.0%
! CATGGAGGTGTATGCTAATG+CGG - chr4_3:66579247-66579266 None:intergenic 45.0%
AACAATCATCTGTGTACCCG+AGG + chr4_3:66579291-66579310 Msa0657110:intron 45.0%
ATAGAAGGACTACCTACCTC+GGG - chr4_3:66579310-66579329 None:intergenic 45.0%
GATAGAAGGACTACCTACCT+CGG - chr4_3:66579311-66579330 None:intergenic 45.0%
ATGTAATTACGGAGGGACAC+TGG - chr4_3:66579388-66579407 None:intergenic 45.0%
CATGTGTCCAAGAATGCATG+TGG + chr4_3:66579472-66579491 Msa0657110:intron 45.0%
TACAACACATAACCCGACAC+TGG - chr4_3:66579670-66579689 None:intergenic 45.0%
AATGATGGCATCCGTGTTCA+AGG + chr4_3:66579728-66579747 Msa0657110:intron 45.0%
TTTAGATGGATACCAGCACG+TGG + chr4_3:66579886-66579905 Msa0657110:CDS 45.0%
ATTCAACATCAACCACGTGC+TGG - chr4_3:66579901-66579920 None:intergenic 45.0%
TTTGCTTTCACTGCTTCTGG+AGG - chr4_3:66579959-66579978 None:intergenic 45.0%
TCCAGAAGCAGTGAAAGCAA+AGG + chr4_3:66579958-66579977 Msa0657110:CDS 45.0%
TCCTTTGCTTTCACTGCTTC+TGG - chr4_3:66579962-66579981 None:intergenic 45.0%
! TCCACAGTTTTCTGGGTATC+AGG - chr4_3:66580001-66580020 None:intergenic 45.0%
TGGTTTCACAATGCTGGTGT+AGG + chr4_3:66580325-66580344 Msa0657110:CDS 45.0%
GTGCAGTTTAGTCATTTCCC+AGG - chr4_3:66580444-66580463 None:intergenic 45.0%
GATGGACGTCTGCAAAATTC+AGG - chr4_3:66580842-66580861 None:intergenic 45.0%
ACTGGGTTGCCCTCCATATA+TGG - chr4_3:66575067-66575086 None:intergenic 50.0%
CTGTAGAGCTCCCATCATAG+TGG + chr4_3:66575088-66575107 Msa0657110:intron 50.0%
GTAGAGCTCCCATCATAGTG+GGG + chr4_3:66575090-66575109 Msa0657110:intron 50.0%
TTTCCGTGCGATTGGGATCA+CGG - chr4_3:66575222-66575241 None:intergenic 50.0%
! TGGTGGTGATCCATAGTCGT+TGG + chr4_3:66575288-66575307 Msa0657110:intron 50.0%
GGTGGTGATCCATAGTCGTT+GGG + chr4_3:66575289-66575308 Msa0657110:intron 50.0%
GTGGTGATCCATAGTCGTTG+GGG + chr4_3:66575290-66575309 Msa0657110:intron 50.0%
CGTTGGGGCTATAGTAGGAT+TGG + chr4_3:66575305-66575324 Msa0657110:intron 50.0%
TCGCTACACGTTCTAGTCGT+GGG + chr4_3:66575337-66575356 Msa0657110:intron 50.0%
CTCCACTGATCCTAGAGTAG+TGG + chr4_3:66575404-66575423 Msa0657110:five_prime_UTR 50.0%
!! TGCCACTACTCTAGGATCAG+TGG - chr4_3:66575409-66575428 None:intergenic 50.0%
AGGATGGAGGAAGCAAGTCA+GGG - chr4_3:66575472-66575491 None:intergenic 50.0%
AAACAGTGGACAGAGACACC+AGG + chr4_3:66575658-66575677 Msa0657110:five_prime_UTR 50.0%
AACAGTGGACAGAGACACCA+GGG + chr4_3:66575659-66575678 Msa0657110:five_prime_UTR 50.0%
! TGATGTGTTGGTGGGCAGTA+AGG + chr4_3:66576185-66576204 Msa0657110:intron 50.0%
AGGAGAAGCCCAAAGTTTGG+AGG + chr4_3:66576205-66576224 Msa0657110:intron 50.0%
GGAGAAGCCCAAAGTTTGGA+GGG + chr4_3:66576206-66576225 Msa0657110:intron 50.0%
CTCTCACTGCCTAACCGTAA+AGG - chr4_3:66576363-66576382 None:intergenic 50.0%
!! GCAGAGTTGAAAAAGCGCCT+TGG + chr4_3:66576595-66576614 Msa0657110:CDS 50.0%
!! CGTTCATTGAAGAGGCACTC+AGG - chr4_3:66577040-66577059 None:intergenic 50.0%
! TCCTTTCTGGCCCACTCTTT+AGG + chr4_3:66577333-66577352 Msa0657110:CDS 50.0%
TCCTAAAGAGTGGGCCAGAA+AGG - chr4_3:66577337-66577356 None:intergenic 50.0%
! TTTCTGGCCCACTCTTTAGG+AGG + chr4_3:66577336-66577355 Msa0657110:CDS 50.0%
TGTGTGCAAGATCACCAGGT+TGG - chr4_3:66577419-66577438 None:intergenic 50.0%
GTTCTGTGTGCAAGATCACC+AGG - chr4_3:66577423-66577442 None:intergenic 50.0%
TCGAAAGGAGGGATGATTGC+TGG + chr4_3:66577471-66577490 Msa0657110:CDS 50.0%
CGAAAGGAGGGATGATTGCT+GGG + chr4_3:66577472-66577491 Msa0657110:CDS 50.0%
GGAAAAAGGCAGGTCTGTTC+TGG + chr4_3:66577546-66577565 Msa0657110:intron 50.0%
GAAGGGAACCCTAAGCACAA+CGG - chr4_3:66577838-66577857 None:intergenic 50.0%
CAACAGAAGAGGTGGTCTGT+TGG - chr4_3:66578190-66578209 None:intergenic 50.0%
GCCATTCTCAACAGAAGAGG+TGG - chr4_3:66578198-66578217 None:intergenic 50.0%
CTCCATTTCCCTCCTTATCG+AGG - chr4_3:66578508-66578527 None:intergenic 50.0%
GAGGGAAATGGAGCTCAGTA+AGG + chr4_3:66578515-66578534 Msa0657110:CDS 50.0%
CTTTGTGGTGGTAAGTCCAC+TGG + chr4_3:66578865-66578884 Msa0657110:intron 50.0%
TTGAAGTCCACAAGGGAGGT+AGG + chr4_3:66578898-66578917 Msa0657110:intron 50.0%
CTGGTCTATCTCTATGGGCT+TGG + chr4_3:66578963-66578982 Msa0657110:intron 50.0%
GCTATGGCTCAGTGTCTATG+AGG - chr4_3:66579117-66579136 None:intergenic 50.0%
AGTTGCAAGGTCGAGTGCAA+AGG - chr4_3:66579151-66579170 None:intergenic 50.0%
TTGACAGAGGGTCTACCTCA+GGG - chr4_3:66579220-66579239 None:intergenic 50.0%
CGCATTAGCATACACCTCCA+TGG + chr4_3:66579245-66579264 Msa0657110:intron 50.0%
ATCATCTGTGTACCCGAGGT+AGG + chr4_3:66579295-66579314 Msa0657110:intron 50.0%
TGCATCTTGTTGGCCAGTGT+CGG + chr4_3:66579654-66579673 Msa0657110:intron 50.0%
CCATCTAAAGATTGGCGAGG+AGG - chr4_3:66579875-66579894 None:intergenic 50.0%
CCTCCTCGCCAATCTTTAGA+TGG + chr4_3:66579872-66579891 Msa0657110:CDS 50.0%
! CTGCTTCTGGAGGAAACTGA+GGG - chr4_3:66579949-66579968 None:intergenic 50.0%
! ACTGCTTCTGGAGGAAACTG+AGG - chr4_3:66579950-66579969 None:intergenic 50.0%
GCCTGATACCCAGAAAACTG+TGG + chr4_3:66579997-66580016 Msa0657110:CDS 50.0%
GATGGGAGCTCTACAGCACT+GGG - chr4_3:66575084-66575103 None:intergenic 55.0%
TGATGGGAGCTCTACAGCAC+TGG - chr4_3:66575085-66575104 None:intergenic 55.0%
TACCCGTGATCCCAATCGCA+CGG + chr4_3:66575216-66575235 Msa0657110:intron 55.0%
TTCCGTGCGATTGGGATCAC+GGG - chr4_3:66575221-66575240 None:intergenic 55.0%
GTCGCTACACGTTCTAGTCG+TGG + chr4_3:66575336-66575355 Msa0657110:intron 55.0%
ATGGAGGAAGCAAGTCAGGG+AGG - chr4_3:66575469-66575488 None:intergenic 55.0%
GAGGATGGAGGAAGCAAGTC+AGG - chr4_3:66575473-66575492 None:intergenic 55.0%
GCTGGCAGTTGAACTTTGGC+AGG + chr4_3:66575632-66575651 Msa0657110:five_prime_UTR 55.0%
!! TAGCTTGAGCTCTAAGGCCC+TGG - chr4_3:66575679-66575698 None:intergenic 55.0%
AAGCAAGTGGGGACAAAGGG+AGG + chr4_3:66576250-66576269 Msa0657110:intron 55.0%
AGCAAGTGGGGACAAAGGGA+GGG + chr4_3:66576251-66576270 Msa0657110:intron 55.0%
! AGTGTGTGTGAGGGGTGTAG+AGG + chr4_3:66576314-66576333 Msa0657110:intron 55.0%
! GTGTGTGTGAGGGGTGTAGA+GGG + chr4_3:66576315-66576334 Msa0657110:intron 55.0%
! TGAGGAGCTTATGCTCTGGG+CGG + chr4_3:66576400-66576419 Msa0657110:intron 55.0%
ACTGATACAGCACAGCGGAC+TGG + chr4_3:66576560-66576579 Msa0657110:intron 55.0%
GATCTTGCACACAGAACGGC+AGG + chr4_3:66577426-66577445 Msa0657110:CDS 55.0%
AGGAGGGATGATTGCTGGGT+TGG + chr4_3:66577476-66577495 Msa0657110:CDS 55.0%
ATTGGGACGCCCAGCAGAAA+TGG - chr4_3:66578087-66578106 None:intergenic 55.0%
GCGCACATCCTCGATAAGGA+GGG + chr4_3:66578497-66578516 Msa0657110:CDS 55.0%
GTTGACAGAGGGTCTACCTC+AGG - chr4_3:66579221-66579240 None:intergenic 55.0%
ACGGAGGGACACTGGAGATT+AGG - chr4_3:66579380-66579399 None:intergenic 55.0%
GGCAGTGACTCTGCAGTGAT+AGG - chr4_3:66579433-66579452 None:intergenic 55.0%
ACTGCAGAGTCACTGCCTGT+TGG + chr4_3:66579436-66579455 Msa0657110:intron 55.0%
GCATCTTGTTGGCCAGTGTC+GGG + chr4_3:66579655-66579674 Msa0657110:intron 55.0%
GAAACTGAGGGCCATCGGAA+GGG - chr4_3:66579937-66579956 None:intergenic 55.0%
TGGAGGAAACTGAGGGCCAT+CGG - chr4_3:66579942-66579961 None:intergenic 55.0%
AAGTGGGGACAAAGGGAGGG+TGG + chr4_3:66576254-66576273 Msa0657110:intron 60.0%
ACAAAGGGAGGGTGGTGAGC+TGG + chr4_3:66576262-66576281 Msa0657110:intron 60.0%
CGCCCAGCAGAAATGGAAGC+TGG - chr4_3:66578080-66578099 None:intergenic 60.0%
GGTGGCGCACATCCTCGATA+AGG + chr4_3:66578493-66578512 Msa0657110:CDS 60.0%
GGCGCACATCCTCGATAAGG+AGG + chr4_3:66578496-66578515 Msa0657110:CDS 60.0%
GGAAACTGAGGGCCATCGGA+AGG - chr4_3:66579938-66579957 None:intergenic 60.0%
TGCCCTGCAGTCCCTTCCGA+TGG + chr4_3:66579923-66579942 Msa0657110:CDS 65.0%
GGCCATCGGAAGGGACTGCA+GGG - chr4_3:66579928-66579947 None:intergenic 65.0%
GGGCCATCGGAAGGGACTGC+AGG - chr4_3:66579929-66579948 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 66574673 66580868 66574673 ID=Msa0657110;Name=Msa0657110
chr4_3 mRNA 66574673 66580868 66574673 ID=Msa0657110-mRNA-1;Parent=Msa0657110;Name=Msa0657110-mRNA-1;_AED=0.20;_eAED=0.20;_QI=754|1|1|1|0.6|0.63|11|451|382
chr4_3 exon 66574673 66575106 66574673 ID=Msa0657110-mRNA-1:exon:19141;Parent=Msa0657110-mRNA-1
chr4_3 exon 66575378 66575795 66575378 ID=Msa0657110-mRNA-1:exon:19142;Parent=Msa0657110-mRNA-1
chr4_3 exon 66576570 66576637 66576570 ID=Msa0657110-mRNA-1:exon:19143;Parent=Msa0657110-mRNA-1
chr4_3 exon 66577098 66577168 66577098 ID=Msa0657110-mRNA-1:exon:19144;Parent=Msa0657110-mRNA-1
chr4_3 exon 66577291 66577557 66577291 ID=Msa0657110-mRNA-1:exon:19145;Parent=Msa0657110-mRNA-1
chr4_3 exon 66578081 66578244 66578081 ID=Msa0657110-mRNA-1:exon:19146;Parent=Msa0657110-mRNA-1
chr4_3 exon 66578322 66578377 66578322 ID=Msa0657110-mRNA-1:exon:19147;Parent=Msa0657110-mRNA-1
chr4_3 exon 66578484 66578536 66578484 ID=Msa0657110-mRNA-1:exon:19148;Parent=Msa0657110-mRNA-1
chr4_3 exon 66579872 66580040 66579872 ID=Msa0657110-mRNA-1:exon:19149;Parent=Msa0657110-mRNA-1
chr4_3 exon 66580135 66580232 66580135 ID=Msa0657110-mRNA-1:exon:19150;Parent=Msa0657110-mRNA-1
chr4_3 exon 66580313 66580868 66580313 ID=Msa0657110-mRNA-1:exon:19151;Parent=Msa0657110-mRNA-1
chr4_3 five_prime_UTR 66574673 66575106 66574673 ID=Msa0657110-mRNA-1:five_prime_utr;Parent=Msa0657110-mRNA-1
chr4_3 five_prime_UTR 66575378 66575697 66575378 ID=Msa0657110-mRNA-1:five_prime_utr;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66575698 66575795 66575698 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66576570 66576637 66576570 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66577098 66577168 66577098 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66577291 66577557 66577291 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66578081 66578244 66578081 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66578322 66578377 66578322 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66578484 66578536 66578484 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66579872 66580040 66579872 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66580135 66580232 66580135 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 CDS 66580313 66580417 66580313 ID=Msa0657110-mRNA-1:cds;Parent=Msa0657110-mRNA-1
chr4_3 three_prime_UTR 66580418 66580868 66580418 ID=Msa0657110-mRNA-1:three_prime_utr;Parent=Msa0657110-mRNA-1
Gene Sequence

>Msa0657110

ATGAGTTCTACCACTAATGGAAACTCTATTTCTAGCATGGGAAATTCTAGGAGTGACCCAGACCATCTCCTTGTTCTTGTTCATGGCATCTTGGCTAGCACAGCGGACTGGACTTATGCAGAAGCAGAGTTGAAAAAGCGCCTTGGAAAGAACTTCCTAATTTATGTAAGTTCATCAAATGCTTATACTAAGACGTTTACTGGGATTGATGGAGCAGGAAAGCGATTAGCTGATGAAGTATTGCAAGTTGTCAAAAAGACAGAGAGTCTGAAAAGAATCTCCTTTCTGGCCCACTCTTTAGGAGGCTTATTTGCTAGATATGCAATAGCTGTCCTTTATTCACATGATACCTATAATAAGGACCAACCTGGTGATCTTGCACACAGAACGGCAGGCAATTCCCAAAGTACAAGCTTTTCGAAAGGAGGGATGATTGCTGGGTTGGAGCCAATCAATTTTATTACTTTAGCATCTCCACATCTTGGTGTAAGAGGAAAAAGGCAGCTTCCATTTCTGCTGGGCGTCCCAATACTAGAAAAGCTTGCTGCACCTATGGCTCCTTTATTTGTTGGTCGGACTGGTAGTCAGTTGTTCCTTACCGATGGTAAACCCAACAGACCACCTCTTCTGTTGAGAATGGCTTCTGATTGTGAAGATGGAAAATTTCTATCTGCACTTGGAGCATTTAAATGTCGCATTGTTTATGCTAATGTTTCGTACGATCATATGGTTGGGTGGCGCACATCCTCGATAAGGAGGGAAATGGAGCTCAGTAAGCCTCCTCGCCAATCTTTAGATGGATACCAGCACGTGGTTGATGTTGAATATTGCCCTGCAGTCCCTTCCGATGGCCCTCAGTTTCCTCCAGAAGCAGTGAAAGCAAAGGAAGCAGCTCAAAATGCGCCTGATACCCAGAAAACTGTGGAATATCATGAAATTGTCGAAGAGGAGATGATTCAAGGATTACAACAGTTGGGATGGAGAAAAGTTGATGTCAGCTTTCACTCATCATTTTGGCCTTTCTTTGCTCATAACAACATTCATGTGAAAAATGAATGGTTTCACAATGCTGGTGTAGGAGTAATTGCTCATGTGGCTGACAGCTTAAGACAACAAGAAACATCGTCAATATTGGTTGCTAGCTTGTAA
Protein sequence

>Msa0657110

MSSTTNGNSISSMGNSRSDPDHLLVLVHGILASTADWTYAEAELKKRLGKNFLIYVSSSNAYTKTFTGIDGAGKRLADEVLQVVKKTESLKRISFLAHSLGGLFARYAIAVLYSHDTYNKDQPGDLAHRTAGNSQSTSFSKGGMIAGLEPINFITLASPHLGVRGKRQLPFLLGVPILEKLAAPMAPLFVGRTGSQLFLTDGKPNRPPLLLRMASDCEDGKFLSALGAFKCRIVYANVSYDHMVGWRTSSIRREMELSKPPRQSLDGYQHVVDVEYCPAVPSDGPQFPPEAVKAKEAAQNAPDTQKTVEYHEIVEEEMIQGLQQLGWRKVDVSFHSSFWPFFAHNNIHVKNEWFHNAGVGVIAHVADSLRQQETSSILVASL*