AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0753270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0753270 MtrunA17_Chr5g0397621 98.216 897 16 0 88 984 14 910 0.0 1796
Msa0753270 MtrunA17_Chr8g0339181 55.851 940 390 7 47 965 22 957 0.0 1014
Msa0753270 MtrunA17_Chr8g0374321 66.862 682 197 8 12 670 14 689 0.0 921
Msa0753270 MtrunA17_Chr2g0297051 49.252 936 439 9 56 960 84 1014 0.0 843
Msa0753270 MtrunA17_Chr2g0297051 31.757 148 95 1 108 249 74 221 1.85e-15 81.6
Msa0753270 MtrunA17_Chr4g0052521 48.370 951 446 10 56 967 45 989 0.0 833
Msa0753270 MtrunA17_Chr4g0052521 30.719 153 90 4 104 241 32 183 8.00e-11 66.2
Msa0753270 MtrunA17_Chr4g0050431 39.470 641 349 8 335 955 287 908 8.81e-130 416
Msa0753270 MtrunA17_Chr8g0374331 79.839 248 50 0 726 973 1 248 7.30e-129 389
Msa0753270 MtrunA17_Chr8g0374391 79.668 241 49 0 733 973 1 241 1.45e-124 378
Msa0753270 MtrunA17_Chr3g0136331 35.659 645 375 11 345 959 251 885 6.38e-111 364
Msa0753270 MtrunA17_Chr8g0374371 81.818 187 33 1 419 604 1 187 2.52e-105 327
Msa0753270 MtrunA17_Chr2g0297871 30.574 592 350 15 405 980 22 568 7.91e-71 249
Msa0753270 MtrunA17_Chr4g0071991 32.008 528 327 11 385 908 160 659 1.33e-70 254
Msa0753270 MtrunA17_Chr4g0053441 28.892 623 379 20 350 934 173 769 1.93e-46 179
Msa0753270 MtrunA17_Chr5g0397631 86.905 84 7 1 1 84 1 80 3.07e-39 152
Msa0753270 MtrunA17_Chr8g0335291 22.540 559 341 16 442 934 152 684 2.13e-21 100
Msa0753270 MtrunA17_Chr1g0148031 23.679 549 324 15 442 923 144 664 2.89e-21 100
Msa0753270 MtrunA17_Chr5g0401211 34.659 176 86 4 769 915 650 825 7.01e-21 99.0
Msa0753270 MtrunA17_Chr6g0452721 23.656 558 337 18 442 934 146 679 7.76e-21 99.0
Msa0753270 MtrunA17_Chr4g0072131 22.878 542 337 13 442 923 147 667 2.58e-20 97.1
Msa0753270 MtrunA17_Chr3g0138931 22.587 549 330 15 442 923 144 664 6.67e-20 95.9
Msa0753270 MtrunA17_Chr3g0134771 33.152 184 94 4 761 915 644 827 7.43e-20 95.9
Msa0753270 MtrunA17_Chr4g0054021 34.091 176 87 4 769 915 573 748 2.06e-19 94.4
Msa0753270 MtrunA17_Chr2g0333721 22.569 545 330 16 442 915 142 665 2.53e-19 94.0
Msa0753270 MtrunA17_Chr8g0382071 33.333 177 89 4 770 917 651 827 3.44e-17 87.0
Msa0753270 MtrunA17_Chr7g0263361 32.911 158 74 3 769 894 628 785 5.28e-17 86.7
Msa0753270 MtrunA17_Chr8g0340261 31.953 169 82 4 759 894 184 352 9.61e-17 84.7
Msa0753270 MtrunA17_Chr2g0298871 29.282 181 95 2 770 917 699 879 4.25e-16 83.6
Msa0753270 MtrunA17_Chr4g0020551 32.184 174 90 3 770 915 587 760 5.27e-16 83.2
Msa0753270 MtrunA17_Chr6g0456201 31.646 158 76 3 769 894 643 800 5.53e-16 83.2
Msa0753270 MtrunA17_Chr7g0260401 31.250 160 76 2 769 894 674 833 8.94e-16 82.4
Msa0753270 MtrunA17_Chr8g0346461 31.875 160 75 2 769 894 621 780 1.05e-15 82.4
Msa0753270 MtrunA17_Chr4g0002331 30.387 181 93 3 770 917 712 892 1.60e-15 81.6
Msa0753270 MtrunA17_Chr4g0059961 28.283 198 107 4 769 934 487 681 7.71e-15 79.3
Msa0753270 MtrunA17_Chr2g0298031 28.723 188 101 3 766 923 486 670 1.04e-14 79.0
Msa0753270 MtrunA17_Chr1g0173111 31.429 175 91 4 770 915 648 822 1.34e-14 78.6
Msa0753270 MtrunA17_Chr7g0276551 28.788 198 105 4 769 934 249 442 1.62e-14 78.2
Msa0753270 MtrunA17_Chr8g0381711 23.454 388 217 9 589 897 286 672 2.25e-14 77.8
Msa0753270 MtrunA17_Chr3g0134951 30.573 157 78 1 769 894 585 741 3.39e-14 77.4
Msa0753270 MtrunA17_Chr1g0147981 28.205 195 100 4 766 930 497 681 4.30e-14 77.0
Msa0753270 MtrunA17_Chr4g0065481 28.205 195 100 4 766 930 481 665 5.05e-14 76.6
Msa0753270 MtrunA17_Chr8g0365021 28.205 195 100 4 766 930 550 734 5.06e-14 77.0
Msa0753270 MtrunA17_Chr2g0304941 28.824 170 91 2 769 908 484 653 2.71e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0753270 AT1G63440.1 73.193 996 236 7 3 973 4 993 0.0 1462
Msa0753270 AT5G44790.1 49.894 944 434 10 56 967 62 998 0.0 867
Msa0753270 AT5G44790.1 33.333 144 92 2 104 246 51 191 3.59e-14 77.8
Msa0753270 AT4G33520.2 35.226 863 439 24 116 955 152 917 8.31e-116 379
Msa0753270 AT5G21930.2 34.647 736 421 17 271 965 167 883 3.77e-115 375
Msa0753270 AT5G21930.1 34.647 736 421 17 271 965 167 883 3.77e-115 375
Msa0753270 AT4G33520.3 35.110 863 440 24 116 955 152 917 8.64e-115 376
Msa0753270 AT5G21930.3 33.152 736 409 18 271 965 167 860 1.68e-102 341
Msa0753270 AT5G21930.4 33.841 656 376 17 271 886 167 804 1.08e-91 310
Msa0753270 AT4G30110.1 32.707 532 323 12 383 908 153 655 7.70e-76 269
Msa0753270 AT4G30110.2 32.707 532 323 12 383 908 153 655 7.70e-76 269
Msa0753270 AT2G19110.2 31.492 543 330 14 385 922 166 671 4.63e-69 251
Msa0753270 AT2G19110.3 31.492 543 330 14 385 922 166 671 4.63e-69 251
Msa0753270 AT2G19110.1 31.492 543 330 14 385 922 166 671 4.63e-69 251
Msa0753270 AT4G30120.2 30.836 347 212 6 387 730 4 325 4.50e-45 167
Msa0753270 AT4G37270.1 28.523 596 370 18 350 908 169 745 1.21e-43 171
Msa0753270 AT4G30120.1 30.836 347 212 6 387 730 163 484 1.54e-43 167
Msa0753270 AT2G41560.2 24.912 570 321 14 452 917 153 719 8.94e-28 121
Msa0753270 AT2G41560.3 24.912 570 321 14 452 917 153 719 8.94e-28 121
Msa0753270 AT2G41560.4 24.912 570 321 14 452 917 153 719 8.94e-28 121
Msa0753270 AT2G41560.1 24.912 570 321 14 452 917 255 821 1.09e-27 121
Msa0753270 AT1G17260.1 23.327 553 317 15 441 915 149 672 4.35e-23 106
Msa0753270 AT5G62670.1 23.784 555 340 17 442 934 146 679 3.29e-22 103
Msa0753270 AT3G60330.4 22.887 568 341 18 432 934 140 675 2.76e-21 100
Msa0753270 AT3G60330.3 22.887 568 341 18 432 934 140 675 2.76e-21 100
Msa0753270 AT3G60330.2 22.711 568 342 18 432 934 140 675 6.06e-21 99.8
Msa0753270 AT3G60330.1 22.711 568 342 18 432 934 140 675 6.06e-21 99.8
Msa0753270 AT3G47950.1 23.243 555 343 17 442 934 150 683 1.03e-20 99.0
Msa0753270 AT3G47950.2 23.243 555 343 17 442 934 150 683 1.03e-20 99.0
Msa0753270 AT3G22910.1 23.105 554 313 16 452 894 245 796 1.27e-20 98.6
Msa0753270 AT2G24520.2 23.949 547 325 16 442 923 187 707 8.95e-20 95.9
Msa0753270 AT2G24520.3 23.949 547 325 16 442 923 124 644 1.06e-19 95.5
Msa0753270 AT2G24520.1 23.949 547 325 16 442 923 124 644 1.06e-19 95.5
Msa0753270 AT1G27770.4 34.659 176 86 5 769 915 653 828 1.87e-19 95.1
Msa0753270 AT1G27770.1 34.659 176 86 5 769 915 653 828 1.87e-19 95.1
Msa0753270 AT1G27770.3 34.659 176 86 5 769 915 590 765 2.01e-19 94.7
Msa0753270 AT2G18960.1 22.482 556 329 16 442 930 142 662 2.16e-19 94.7
Msa0753270 AT2G18960.3 22.482 556 329 16 442 930 78 598 2.29e-19 94.4
Msa0753270 AT2G18960.2 22.482 556 329 16 442 930 78 598 2.29e-19 94.4
Msa0753270 AT4G37640.1 33.523 176 88 4 769 915 650 825 3.27e-19 94.0
Msa0753270 AT2G07560.1 22.180 532 320 16 439 904 144 647 3.28e-19 94.0
Msa0753270 AT2G22950.1 33.523 176 88 4 769 915 651 826 7.94e-19 92.8
Msa0753270 AT3G57330.2 32.402 179 93 2 767 917 585 763 1.46e-18 92.0
Msa0753270 AT3G57330.1 32.402 179 93 2 767 917 640 818 1.62e-18 92.0
Msa0753270 AT1G07670.2 31.646 158 76 3 769 894 623 780 6.87e-17 86.7
Msa0753270 AT1G07670.1 31.646 158 76 3 769 894 623 780 6.87e-17 86.7
Msa0753270 AT1G07810.1 31.646 158 76 3 769 894 623 780 9.66e-17 86.3
Msa0753270 AT3G63380.1 32.704 159 74 2 769 894 642 800 1.98e-16 85.1
Msa0753270 AT5G57110.1 29.282 181 95 2 770 917 677 857 3.23e-16 84.3
Msa0753270 AT5G57110.3 29.282 181 95 2 770 917 677 857 3.23e-16 84.3
Msa0753270 AT5G57110.2 29.282 181 95 2 770 917 677 857 3.23e-16 84.3
Msa0753270 AT3G21180.1 30.939 181 92 3 770 917 694 874 3.36e-16 84.3
Msa0753270 AT4G29900.1 30.387 181 93 3 770 917 681 861 6.11e-16 83.6
Msa0753270 AT4G29900.2 30.387 181 93 3 770 917 681 861 6.11e-16 83.6
Msa0753270 AT2G24520.4 24.500 400 226 11 590 923 12 401 1.08e-15 82.4
Msa0753270 AT1G10130.1 30.573 157 78 1 769 894 584 740 8.49e-15 79.7
Msa0753270 AT5G57350.3 29.231 195 98 4 766 930 217 401 9.51e-15 79.3
Msa0753270 AT5G57350.4 29.231 195 98 4 766 930 479 663 1.38e-14 79.0
Msa0753270 AT5G57350.2 29.231 195 98 4 766 930 479 663 1.38e-14 79.0
Msa0753270 AT5G57350.1 29.231 195 98 4 766 930 479 663 1.38e-14 79.0
Msa0753270 AT4G00900.2 30.625 160 77 2 769 894 617 776 2.82e-14 78.2
Msa0753270 AT4G00900.1 30.625 160 77 2 769 894 617 776 2.82e-14 78.2
Msa0753270 AT4G30190.1 28.205 195 100 4 766 930 478 662 7.72e-14 76.6
Msa0753270 AT3G42640.1 30.769 169 86 3 766 904 481 648 1.38e-13 75.9
Msa0753270 AT1G80660.2 27.568 185 96 3 769 915 357 541 6.64e-13 73.6
Msa0753270 AT1G80660.1 29.518 166 86 3 769 904 486 650 7.34e-13 73.6
Msa0753270 AT1G80660.4 28.994 169 89 3 766 904 483 650 7.82e-13 73.2
Msa0753270 AT1G80660.3 28.994 169 89 3 766 904 483 650 8.02e-13 73.2

Find 225 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCCATGTAGCCGTTTAA+TGG 0.160058 5_2:+6956801 None:intergenic
CTCAATTATGTTTGGGCTTT+GGG 0.163205 5_2:-6951763 Msa0753270:CDS
TTCTGATGGGCTTGTTGTTT+GGG 0.168913 5_2:-6954511 Msa0753270:CDS
TACCAAAGGCACAAAGTATT+TGG 0.170253 5_2:+6954269 None:intergenic
GCAAATAATGGTCGGTAATA+AGG 0.177452 5_2:-6952968 Msa0753270:CDS
GTCAAGGCTGTTCAGCTTCT+TGG 0.179922 5_2:+6951591 None:intergenic
CTTCTGATGGGCTTGTTGTT+TGG 0.184672 5_2:-6954512 Msa0753270:CDS
ACTTGTCCCTGCCTCGTCTT+TGG 0.226913 5_2:+6956921 None:intergenic
ATTGCCTGCCCTTGTGCTTT+GGG 0.277345 5_2:-6953975 Msa0753270:CDS
CATCTACAGCTTCCAAGATT+TGG 0.282832 5_2:+6955408 None:intergenic
CCTCAATTATGTTTGGGCTT+TGG 0.283004 5_2:-6951764 Msa0753270:CDS
CTTCTGTTGCTAAAGCTACT+TGG 0.285373 5_2:+6955471 None:intergenic
GAAACAAAATCTCGGGCTTC+TGG 0.288098 5_2:+6953030 None:intergenic
TTTGAGGGCTGCTACTTCTA+AGG 0.296547 5_2:-6954784 Msa0753270:CDS
TACTGCTATATTGTTGAGTT+TGG 0.296733 5_2:-6954628 Msa0753270:CDS
TTCCAAATACTTTGTGCCTT+TGG 0.299972 5_2:-6954271 Msa0753270:intron
TATTGCCTGCCCTTGTGCTT+TGG 0.308202 5_2:-6953976 Msa0753270:CDS
CTTATTTCGTTTATTCTGTT+AGG 0.315628 5_2:-6954723 Msa0753270:CDS
AGCCACACCTACTGCTGTTA+TGG 0.315710 5_2:-6953949 Msa0753270:CDS
TTCTAAAGTCTATGAAAATT+AGG 0.317325 5_2:-6952777 Msa0753270:CDS
AAGATGAAGAGAACCCTTCT+TGG 0.320952 5_2:-6953053 Msa0753270:CDS
CACTGGAGTTGGTGCATCTC+AGG 0.324242 5_2:-6953922 Msa0753270:CDS
TCTTATAAAGCAGACATAAC+AGG 0.327815 5_2:-6955209 Msa0753270:CDS
CGGTTGCCGCCTTGGATCGC+TGG 0.329851 5_2:-6951682 Msa0753270:CDS
GAAGACGGTATCCAGGATTT+CGG 0.331287 5_2:+6954047 None:intergenic
TGATGTGATTAAGATTATTC+CGG 0.335725 5_2:-6954547 Msa0753270:CDS
AAATGCGATCAGCAAACTTC+TGG 0.335934 5_2:+6954292 None:intergenic
CAGGCTTTCGGTTGCCGCCT+TGG 0.339159 5_2:-6951690 Msa0753270:CDS
CTTGTCCCTGCCTCGTCTTT+GGG 0.342550 5_2:+6956922 None:intergenic
TCAAGGCTGTTCAGCTTCTT+GGG 0.342772 5_2:+6951592 None:intergenic
GTATACGCCTCAATTATGTT+TGG 0.343337 5_2:-6951771 Msa0753270:CDS
GTATGCCGTATACAAATAAA+AGG 0.345506 5_2:-6955563 Msa0753270:CDS
ATGGCGAAGGGAATGTTGTT+GGG 0.353350 5_2:-6954605 Msa0753270:CDS
CTCAACAATATAGCAGTATC+AGG 0.355057 5_2:+6954633 None:intergenic
ATCTCTTCTTCCACCTTCAC+TGG 0.360798 5_2:+6955121 None:intergenic
TATACGCCTCAATTATGTTT+GGG 0.364978 5_2:-6951770 Msa0753270:CDS
ATCTGCTTTCTGATCCGGTT+TGG 0.369734 5_2:+6952672 None:intergenic
ACTTTATCTGCTTTCTGATC+CGG 0.372861 5_2:+6952667 None:intergenic
AAGACGGTATCCAGGATTTC+GGG 0.380000 5_2:+6954048 None:intergenic
GCGTCGTGGTTCTGCTAATA+TGG 0.383420 5_2:-6954862 Msa0753270:CDS
TTTGAGCTTGCTCTGCAGTT+TGG 0.384745 5_2:-6954014 Msa0753270:CDS
AAGACCGGTACTCTTACTAT+TGG 0.390330 5_2:-6953419 Msa0753270:CDS
GGCAACCGAAAGCCTGTAGA+AGG 0.392593 5_2:+6951697 None:intergenic
CAAATAATGGTCGGTAATAA+GGG 0.394214 5_2:-6952967 Msa0753270:CDS
GATGGCGAAGGGAATGTTGT+TGG 0.397682 5_2:-6954606 Msa0753270:CDS
AACAGATGAAATATGAGAAC+TGG 0.400196 5_2:+6951363 None:intergenic
TGGCTATGAGTAATGATGTT+TGG 0.400777 5_2:+6955428 None:intergenic
TCTATAAATGGGGAAGTAGC+TGG 0.405499 5_2:-6952853 Msa0753270:CDS
TCAGCTCTAAAAGCCCTTCC+TGG 0.406405 5_2:-6955506 Msa0753270:CDS
CAACAAGTTCATAGAATTCC+CGG 0.406563 5_2:+6953351 None:intergenic
CTAGCTGCACACAGTAGAAA+TGG 0.409795 5_2:+6951489 None:intergenic
TCATGGTGACTGGAGACAAC+TGG 0.411106 5_2:-6952750 Msa0753270:CDS
TGGCTTGCCTGGTTCTTAGC+TGG 0.413456 5_2:-6954086 Msa0753270:CDS
CTCCATGGCAGAGGCGGGGC+CGG 0.414800 5_2:+6956897 None:intergenic
GATGTGATTAAGATTATTCC+GGG 0.416786 5_2:-6954546 Msa0753270:CDS
AAAGCCCTTCCTGGAGTTGT+TGG 0.420383 5_2:-6955497 Msa0753270:CDS
ACTTGTTGAGTCTGCTCAAA+TGG 0.423294 5_2:-6954328 Msa0753270:CDS
ATGACTTGCTCCGCTTGTGC+TGG 0.423966 5_2:-6956838 Msa0753270:CDS
AAAAGAACTCCAGCTGCTAT+TGG 0.426533 5_2:+6951721 None:intergenic
CGTTCGTAACAAGCAAATAA+TGG 0.436023 5_2:-6952980 Msa0753270:CDS
CATTACTCATAGCCAAATCT+TGG 0.439206 5_2:-6955420 Msa0753270:CDS
CTTGGCATTCCAATAGCAGC+TGG 0.440345 5_2:-6951730 Msa0753270:CDS
TATTGGAGAGGTTATTCGTT+GGG 0.440502 5_2:-6954949 Msa0753270:CDS
ATCATGCTTACCCGAAATCC+TGG 0.442883 5_2:-6954058 Msa0753270:CDS
AATTCCATTGCAAGGGAAGT+TGG 0.443142 5_2:-6952718 Msa0753270:CDS
GAAACCTCCATGGCAGAGGC+GGG 0.444461 5_2:+6956892 None:intergenic
TTCTGGGTACACGGTGGCTA+TGG 0.446961 5_2:-6951959 Msa0753270:CDS
GGTGCAAAAGTTGCTTCTGA+TGG 0.448482 5_2:-6954525 Msa0753270:CDS
GGTCGGTAATAAGGGCTTGA+TGG 0.449447 5_2:-6952959 Msa0753270:CDS
GCTTTGGGTTATAATTTGCT+TGG 0.454401 5_2:-6951748 Msa0753270:CDS
AGCTTTGGAAAGTGCACATA+AGG 0.456783 5_2:-6953877 Msa0753270:intron
TTCTGTTGCTAAAGCTACTT+GGG 0.456910 5_2:+6955472 None:intergenic
GACGAGGCAGGGACAAGTAC+CGG 0.458961 5_2:-6956916 Msa0753270:CDS
GCCGAAAACATGGCTCAAAC+AGG 0.459491 5_2:-6952886 Msa0753270:CDS
CATGTTAAGGCAACGAAGGT+TGG 0.462412 5_2:-6954381 Msa0753270:CDS
GATCAAAGGAGGGCAAGCTT+TGG 0.463274 5_2:-6953892 Msa0753270:CDS
TTGGATCGCTGGAGCTGCTA+TGG 0.464018 5_2:-6951671 Msa0753270:CDS
ATCGTGAAGATGCTTACTAT+TGG 0.467103 5_2:-6954966 Msa0753270:CDS
AGCTGAACAGCCTTGACATA+GGG 0.471195 5_2:-6951585 Msa0753270:CDS
GCAGATGTGGGAATGGCAAT+AGG 0.471457 5_2:-6951898 Msa0753270:CDS
TCTCGGGCTTCTGGCCAAGA+AGG 0.471879 5_2:+6953039 None:intergenic
GGAAGAAATTGATAGTAGGT+TGG 0.473391 5_2:-6954580 Msa0753270:CDS
CATTTCTACTGTGTGCAGCT+AGG 0.475073 5_2:-6951488 Msa0753270:three_prime_UTR
AGAGAAAAGTCCGGTGACCT+TGG 0.479257 5_2:+6956870 None:intergenic
GGGAGGAAGAAATTGATAGT+AGG 0.480054 5_2:-6954584 Msa0753270:CDS
AGGAAAGGTGATACTGTTAT+CGG 0.485797 5_2:-6954432 Msa0753270:CDS
TCTTGAGCACCTGGTTTCAG+TGG 0.486773 5_2:+6952811 None:intergenic
TTGGGATAAGAAGGCATTGA+AGG 0.486869 5_2:+6956940 None:intergenic
TACCGGCCCCGCCTCTGCCA+TGG 0.486897 5_2:-6956899 Msa0753270:CDS
CTATAAATGGGGAAGTAGCT+GGG 0.488705 5_2:-6952852 Msa0753270:CDS
AGACCGGTACTCTTACTATT+GGG 0.489290 5_2:-6953418 Msa0753270:CDS
CCGTGGAGAAATCCATTAAA+CGG 0.490047 5_2:-6956813 Msa0753270:CDS
ATCTTCGACGAGTTTGATCA+TGG 0.490734 5_2:+6955298 None:intergenic
GTGTGTAATTCTAAAACTCC+AGG 0.492652 5_2:+6955260 None:intergenic
TGTTATTGCTGAAGCCAAAC+CGG 0.492883 5_2:-6952686 Msa0753270:CDS
GTGCAAAAGTTGCTTCTGAT+GGG 0.493563 5_2:-6954524 Msa0753270:CDS
AACTAGTAATGGAAATTTGA+AGG 0.493572 5_2:-6955156 Msa0753270:CDS
GTCCATGGAAGACGGTATCC+AGG 0.495093 5_2:+6954040 None:intergenic
CAGTAATGGAAACAAAATCT+CGG 0.495105 5_2:+6953022 None:intergenic
TTGGAAGCTGTAGATGAAGC+TGG 0.500496 5_2:-6955401 Msa0753270:CDS
GGAAACCTCCATGGCAGAGG+CGG 0.503060 5_2:+6956891 None:intergenic
TCTTATCCCAAAGACGAGGC+AGG 0.508521 5_2:-6956928 Msa0753270:CDS
GCAGTTTGGAATTTCTGTCA+TGG 0.508557 5_2:-6954000 Msa0753270:CDS
AAATCCATTAAACGGCTACA+TGG 0.508653 5_2:-6956805 Msa0753270:CDS
GTTATGGTTGGCACTGGAGT+TGG 0.509447 5_2:-6953933 Msa0753270:CDS
GTGAATGAGAGTATGATAAC+TGG 0.512746 5_2:-6954477 Msa0753270:CDS
GAAATCACTTCTTGAGCACC+TGG 0.516021 5_2:+6952802 None:intergenic
AAGCTGAACAGCCTTGACAT+AGG 0.516431 5_2:-6951586 Msa0753270:CDS
CTCTGCCATGGAGGTTTCCA+AGG 0.516531 5_2:-6956887 Msa0753270:CDS
TTCGTTTCGAAAACAAGCTA+AGG 0.518784 5_2:+6956996 None:intergenic
CGATCAGCAAACTTCTGGAC+AGG 0.520178 5_2:+6954297 None:intergenic
TATGGATGTGCTGATAGCAC+TGG 0.521417 5_2:-6954844 Msa0753270:CDS
GCCTCGTCTTTGGGATAAGA+AGG 0.521922 5_2:+6956931 None:intergenic
TTTGTTTCCATTACTGGACA+TGG 0.523642 5_2:-6953015 Msa0753270:CDS
CTTTACTCCATGTCCAGTAA+TGG 0.526279 5_2:+6953008 None:intergenic
CTCCGCTTGTGCTGGATCCG+TGG 0.526875 5_2:-6956830 Msa0753270:CDS
CATGGTGACTGGAGACAACT+GGG 0.527270 5_2:-6952749 Msa0753270:CDS
ATTAGGAGCATCATGGTGAC+TGG 0.527343 5_2:-6952760 Msa0753270:CDS
GAATGGTGTCTTGCATGTTA+AGG 0.527353 5_2:-6954394 Msa0753270:CDS
AATTCCAACTTCCCTTGCAA+TGG 0.532336 5_2:+6952714 None:intergenic
ATCACATTAATGAAATCCCT+TGG 0.532861 5_2:+6955185 None:intergenic
CTATTGGAGAGGTTATTCGT+TGG 0.536377 5_2:-6954950 Msa0753270:CDS
TAAACCCAAAGCACAAGGGC+AGG 0.536972 5_2:+6953971 None:intergenic
TGTTGAGTTTGGATGGCGAA+GGG 0.537106 5_2:-6954617 Msa0753270:CDS
GCTATATTGTTGAGTTTGGA+TGG 0.539889 5_2:-6954624 Msa0753270:CDS
AGTAATGGAAACAAAATCTC+GGG 0.540576 5_2:+6953023 None:intergenic
TGCACTTGTAGCAGCAGATG+TGG 0.540700 5_2:-6951911 Msa0753270:CDS
GATTCTCTTCGATCACTCCC+TGG 0.541274 5_2:-6955278 Msa0753270:CDS
TGGCACAGACATTGCTATTG+AGG 0.544713 5_2:-6951872 Msa0753270:CDS
AGCAAGCTCAAAGCTGTCCA+TGG 0.545005 5_2:+6954025 None:intergenic
TGTACTAATGAAGAGCAACT+TGG 0.545258 5_2:-6951839 Msa0753270:CDS
ATAGCAGCTCCAGCGATCCA+AGG 0.546487 5_2:+6951673 None:intergenic
CATTACTGGACATGGAGTAA+AGG 0.547296 5_2:-6953007 Msa0753270:CDS
CACCCGAAAATGAACTGCAC+TGG 0.547314 5_2:+6954915 None:intergenic
ACATCTGCTGCTACAAGTGC+AGG 0.550045 5_2:+6951913 None:intergenic
GGCTCCAACAACTCCAGGAA+GGG 0.555414 5_2:+6955493 None:intergenic
CAATCGTCATGTATGATCAA+AGG 0.557472 5_2:+6951535 None:intergenic
CTTGGAAACCTCCATGGCAG+AGG 0.558734 5_2:+6956888 None:intergenic
GCAAACAACACTGACAGAAG+AGG 0.559172 5_2:+6951645 None:intergenic
TCTCTTCTTCCACCTTCACT+GGG 0.559842 5_2:+6955122 None:intergenic
TCTGATGGGCTTGTTGTTTG+GGG 0.559897 5_2:-6954510 Msa0753270:CDS
AAAATATTTCCCAGTGAAGG+TGG 0.561487 5_2:-6955131 Msa0753270:CDS
AGTAGATCTTCAGCAACAGC+AGG 0.561622 5_2:+6952916 None:intergenic
AGGCACGTCCTGTGTCTAAG+AGG 0.562376 5_2:-6954452 Msa0753270:CDS
TCACCTTTCCTCTTAGACAC+AGG 0.563727 5_2:+6954444 None:intergenic
CTTATAAAGCAGACATAACA+GGG 0.566000 5_2:-6955208 Msa0753270:CDS
CATTATTTGCTTGTTACGAA+CGG 0.566291 5_2:+6952981 None:intergenic
TCAACAACGGCCTTAGCTAG+TGG 0.566415 5_2:+6953093 None:intergenic
ACTGCTGTTATGGTTGGCAC+TGG 0.566537 5_2:-6953939 Msa0753270:CDS
ATGGTGTTTATGTATATACC+TGG 0.568017 5_2:-6955014 Msa0753270:CDS
AAGCGGAGCAAGTCATTCCA+TGG 0.568135 5_2:+6956845 None:intergenic
CTCGGGCTTCTGGCCAAGAA+GGG 0.570108 5_2:+6953040 None:intergenic
CCGTTTAATGGATTTCTCCA+CGG 0.571861 5_2:+6956813 None:intergenic
ACTAATGAAGAGCAACTTGG+AGG 0.572225 5_2:-6951836 Msa0753270:CDS
ACTGGAGTTGGTGCATCTCA+GGG 0.572906 5_2:-6953921 Msa0753270:CDS
AAACCTCCATGGCAGAGGCG+GGG 0.573815 5_2:+6956893 None:intergenic
CAGGGTGTATTGATCAAAGG+AGG 0.574494 5_2:-6953903 Msa0753270:CDS
CAGTGAACATCCACTAGCTA+AGG 0.574741 5_2:-6953103 Msa0753270:CDS
ACACCTACTGCTGTTATGGT+TGG 0.577479 5_2:-6953945 Msa0753270:CDS
TGTAGCAGCAGATGTGGGAA+TGG 0.580641 5_2:-6951905 Msa0753270:CDS
AGTAGCTTTAGCAACAGAAG+AGG 0.581864 5_2:-6955468 Msa0753270:CDS
GGGCTCCAACAACTCCAGGA+AGG 0.582459 5_2:+6955492 None:intergenic
AAGCAGACATAACAGGGCCA+AGG 0.582491 5_2:-6955202 Msa0753270:CDS
CTATGATAAGAAGTTAATGA+AGG 0.583011 5_2:-6951411 Msa0753270:three_prime_UTR
ATGGAGGTTTCCAAGGTCAC+CGG 0.583920 5_2:-6956880 Msa0753270:CDS
CGAAGGGAATGTTGTTGGGG+AGG 0.585027 5_2:-6954601 Msa0753270:CDS
TGGCGAAGGGAATGTTGTTG+GGG 0.586516 5_2:-6954604 Msa0753270:CDS
ACTTGGGCTCCAACAACTCC+AGG 0.586558 5_2:+6955488 None:intergenic
AACTGCTAATTCCATTGCAA+GGG 0.588246 5_2:-6952725 Msa0753270:CDS
CCAAAGCCCAAACATAATTG+AGG 0.588978 5_2:+6951764 None:intergenic
GTGGCTAAACCCAAAGCACA+AGG 0.589800 5_2:+6953966 None:intergenic
ACTTGCTGAAGCCGAAAACA+TGG 0.591432 5_2:-6952896 Msa0753270:CDS
GGTGGAACTTTGAATGAGAA+TGG 0.592551 5_2:-6954411 Msa0753270:CDS
CTCCACGGATCCAGCACAAG+CGG 0.593009 5_2:+6956828 None:intergenic
GTGATTGTAGAAACTAGTAA+TGG 0.593567 5_2:-6955167 Msa0753270:CDS
TTGTTGAGTTTGGATGGCGA+AGG 0.594736 5_2:-6954618 Msa0753270:CDS
GGGTACACGGTGGCTATGGT+CGG 0.595035 5_2:-6951955 Msa0753270:CDS
AACCATAACAGCAGTAGGTG+TGG 0.596571 5_2:+6953947 None:intergenic
TATGAAAATTAGGAGCATCA+TGG 0.598156 5_2:-6952767 Msa0753270:CDS
TGGGATAAGAAGGCATTGAA+GGG 0.598664 5_2:+6956941 None:intergenic
GTGGGAATGGCAATAGGTGC+TGG 0.599052 5_2:-6951892 Msa0753270:CDS
AGCAGACATAACAGGGCCAA+GGG 0.601857 5_2:-6955201 Msa0753270:CDS
AAAATCGATCTCCACGTGGA+AGG 0.602309 5_2:-6955338 Msa0753270:CDS
ATATCTGATCCACTGAAACC+AGG 0.604258 5_2:-6952820 Msa0753270:CDS
GGTGACCTTGGAAACCTCCA+TGG 0.608241 5_2:+6956882 None:intergenic
CGTCCTGTGTCTAAGAGGAA+AGG 0.608923 5_2:-6954447 Msa0753270:CDS
TCTCAGGGTGTATTGATCAA+AGG 0.609729 5_2:-6953906 Msa0753270:CDS
GCGAAAATATTTCCCAGTGA+AGG 0.609868 5_2:-6955134 Msa0753270:CDS
CTTATCCCAAAGACGAGGCA+GGG 0.611705 5_2:-6956927 Msa0753270:CDS
GAACTGCTAATTCCATTGCA+AGG 0.612986 5_2:-6952726 Msa0753270:CDS
TCAAAGCTGTCCATGGAAGA+CGG 0.613051 5_2:+6954032 None:intergenic
GAAGATGCTTACTATTGGAG+AGG 0.619198 5_2:-6954961 Msa0753270:CDS
ATAGGAGGAGGCTATTTGTG+AGG 0.619468 5_2:-6955651 Msa0753270:intron
GTGCCAACCATAACAGCAGT+AGG 0.620470 5_2:+6953942 None:intergenic
CGTAACAAGCAAATAATGGT+CGG 0.624159 5_2:-6952976 Msa0753270:CDS
TATTTGCTTGTTACGAACGG+TGG 0.624706 5_2:+6952984 None:intergenic
CTTCCCAATAGTAAGAGTAC+CGG 0.625745 5_2:+6953415 None:intergenic
TGTGAGGCAATTGAAGACGC+TGG 0.626299 5_2:-6955635 Msa0753270:CDS
TAGAGCTGATTCAACCGCGG+TGG 0.632104 5_2:+6955520 None:intergenic
TATAAATGGGGAAGTAGCTG+GGG 0.633789 5_2:-6952851 Msa0753270:CDS
GATGTAAGCAGAAAACAACT+TGG 0.633965 5_2:-6951389 Msa0753270:three_prime_UTR
TGAACTTGTTGCTGCAGCTG+AGG 0.636560 5_2:-6953339 Msa0753270:intron
GCACTTGTAGCAGCAGATGT+GGG 0.637701 5_2:-6951910 Msa0753270:CDS
CTTGCATGTTAAGGCAACGA+AGG 0.645262 5_2:-6954385 Msa0753270:CDS
GCAGCTCCAGCGATCCAAGG+CGG 0.645327 5_2:+6951676 None:intergenic
GCTGAACAGCCTTGACATAG+GGG 0.650613 5_2:-6951584 Msa0753270:CDS
TCCATGGACAGAGAAAAGTC+CGG 0.650615 5_2:+6956861 None:intergenic
TGTGTAATTCTAAAACTCCA+GGG 0.652850 5_2:+6955261 None:intergenic
AAAGGTGATACTGTTATCGG+TGG 0.655577 5_2:-6954429 Msa0753270:CDS
CTGAACAGCCTTGACATAGG+GGG 0.658953 5_2:-6951583 Msa0753270:CDS
GCAACCGAAAGCCTGTAGAA+GGG 0.668289 5_2:+6951698 None:intergenic
TCTGTTAGGAAAGTATCTTG+AGG 0.673983 5_2:-6954709 Msa0753270:CDS
AGGGTGTATTGATCAAAGGA+GGG 0.674325 5_2:-6953902 Msa0753270:CDS
GCTTATAAATCATTGCGTCG+TGG 0.674394 5_2:-6954876 Msa0753270:CDS
TGTTGAGATCACCTTCCACG+TGG 0.681227 5_2:+6955327 None:intergenic
ACGGTGGCTATGGTCGGCGA+CGG 0.683789 5_2:-6951949 Msa0753270:CDS
TGAAGACGCTGGATTTGACG+CGG 0.689222 5_2:-6955624 Msa0753270:CDS
ATGGATGTGCTGATAGCACT+GGG 0.694300 5_2:-6954843 Msa0753270:CDS
GCCTTCTTATCCCAAAGACG+AGG 0.700297 5_2:-6956932 Msa0753270:CDS
AGGTATATACATAAACACCA+TGG 0.708250 5_2:+6955016 None:intergenic
TGGCTAAACCCAAAGCACAA+GGG 0.722049 5_2:+6953967 None:intergenic
TGAGAGTATGATAACTGGTG+AGG 0.727598 5_2:-6954472 Msa0753270:CDS
AAGCAAAATCGATCTCCACG+TGG 0.768960 5_2:-6955342 Msa0753270:CDS
ATGCACGTCGTGTTCCACCG+CGG 0.778510 5_2:-6955534 Msa0753270:CDS
ATGGTGACTGGAGACAACTG+GGG 0.796917 5_2:-6952748 Msa0753270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAGACTAAATTATATTA+GGG + chr5_2:6952243-6952262 None:intergenic 10.0%
!! TTTGAATATAATGTTAAAAA+TGG - chr5_2:6954773-6954792 Msa0753270:CDS 10.0%
!!! ATATGTTCTTTAAGTTATTT+TGG + chr5_2:6952193-6952212 None:intergenic 15.0%
!! AATAGACTAAATTATATTAG+GGG + chr5_2:6952242-6952261 None:intergenic 15.0%
!! CTAATAGACTAAATTATATT+AGG + chr5_2:6952244-6952263 None:intergenic 15.0%
!!! TTTAATTTTATTTTCATAGG+AGG - chr5_2:6952717-6952736 Msa0753270:CDS 15.0%
!! CATATCATATCATTATAATA+TGG + chr5_2:6954151-6954170 None:intergenic 15.0%
!!! GAATTTTAGTATCTATAAAT+GGG - chr5_2:6955519-6955538 Msa0753270:CDS 15.0%
!!! AATTTTAGTATCTATAAATG+GGG - chr5_2:6955520-6955539 Msa0753270:CDS 15.0%
!! TCAATTATCTATAATTCTAT+AGG - chr5_2:6955950-6955969 Msa0753270:intron 15.0%
!!! GTTTTTGATATAAACTATAA+AGG + chr5_2:6956139-6956158 None:intergenic 15.0%
!!! GTGATATTTTATTTTAAGTT+AGG - chr5_2:6956937-6956956 Msa0753270:CDS 15.0%
!!! AAGGAATATTTTGTGTATAA+TGG - chr5_2:6951957-6951976 Msa0753270:CDS 20.0%
!! TGTTACAAAAAATAATGATG+TGG + chr5_2:6952111-6952130 None:intergenic 20.0%
!! ACACACAAAAAAATATGTAT+CGG + chr5_2:6952303-6952322 None:intergenic 20.0%
!! GTTCAAAATGCAAATTATAA+GGG - chr5_2:6952421-6952440 Msa0753270:intron 20.0%
!! CAACTCATATATAAATACTA+CGG + chr5_2:6952516-6952535 None:intergenic 20.0%
!!! TCATTCCTTTTATTTGTATA+CGG + chr5_2:6952828-6952847 None:intergenic 20.0%
!!! GCTATTACAAATCTTTTTTA+TGG - chr5_2:6953310-6953329 Msa0753270:intron 20.0%
!! ACCTGGAATAAAAAATTTAT+TGG - chr5_2:6953386-6953405 Msa0753270:CDS 20.0%
!!! TCCAATAAATTTTTTATTCC+AGG + chr5_2:6953390-6953409 None:intergenic 20.0%
!! TGGTATAATATAATTACCAA+AGG + chr5_2:6954131-6954150 None:intergenic 20.0%
!! TCAAGAAAATTGAATAGAAA+AGG + chr5_2:6954184-6954203 None:intergenic 20.0%
!! AATCTATTATTAACAAACAC+CGG + chr5_2:6954704-6954723 None:intergenic 20.0%
!!! ACTATCTATAAAAGTATTCA+TGG - chr5_2:6954859-6954878 Msa0753270:CDS 20.0%
!! TACAAAACTATTGACAAAAA+TGG - chr5_2:6955005-6955024 Msa0753270:CDS 20.0%
!!! CTCTTCATCTTTAAATTTTT+TGG + chr5_2:6955321-6955340 None:intergenic 20.0%
!!! GGAATTTTAGTATCTATAAA+TGG - chr5_2:6955518-6955537 Msa0753270:CDS 20.0%
!!! AATTTTCATAGACTTTAGAA+TGG + chr5_2:6955606-6955625 None:intergenic 20.0%
!!! TTCTAAAGTCTATGAAAATT+AGG - chr5_2:6955606-6955625 Msa0753270:CDS 20.0%
!!! TGCTATTATTTTCTATTTCA+AGG + chr5_2:6956031-6956050 None:intergenic 20.0%
! TTAGTTACGTTAACAAAAGA+GGG + chr5_2:6951659-6951678 None:intergenic 25.0%
! TGCACAAAATGAATAAAAGA+GGG + chr5_2:6951692-6951711 None:intergenic 25.0%
!!! ATGTTCTAAGATATCTGATA+AGG - chr5_2:6952058-6952077 Msa0753270:intron 25.0%
! GGTTCAAAATGCAAATTATA+AGG - chr5_2:6952420-6952439 Msa0753270:intron 25.0%
!!! TGCATTTCTTTTTAAGTTCT+AGG - chr5_2:6952450-6952469 Msa0753270:intron 25.0%
!!! AATTTTATTTTCATAGGAGG+AGG - chr5_2:6952720-6952739 Msa0753270:CDS 25.0%
!! AATTTTGTTGAATTCGAGAT+TGG + chr5_2:6953148-6953167 None:intergenic 25.0%
!! AACTAGTAATGGAAATTTGA+AGG - chr5_2:6953227-6953246 Msa0753270:intron 25.0%
! AAGAGATACTCATAGAAAAA+AGG - chr5_2:6953278-6953297 Msa0753270:intron 25.0%
!!! CAAATCTTTTTTATGGAGTT+TGG - chr5_2:6953317-6953336 Msa0753270:intron 25.0%
!! ATTCTGTTTATTCTGTTTTG+AGG - chr5_2:6953583-6953602 Msa0753270:intron 25.0%
!!! TTCTGTTTATTCTGTTTTGA+GGG - chr5_2:6953584-6953603 Msa0753270:intron 25.0%
! CTTATTTCGTTTATTCTGTT+AGG - chr5_2:6953660-6953679 Msa0753270:intron 25.0%
! TGATGTGATTAAGATTATTC+CGG - chr5_2:6953836-6953855 Msa0753270:intron 25.0%
!!! TATATGACAAATGGACTAAT+TGG + chr5_2:6954623-6954642 None:intergenic 25.0%
! TCCATTTGTCATATATGTTT+AGG - chr5_2:6954628-6954647 Msa0753270:CDS 25.0%
! TCCTAAACATATATGACAAA+TGG + chr5_2:6954632-6954651 None:intergenic 25.0%
! TTCTTCATATCAAATGAACA+TGG + chr5_2:6954681-6954700 None:intergenic 25.0%
!!! TCATGGTTTTACTTTTTATG+TGG - chr5_2:6954876-6954895 Msa0753270:CDS 25.0%
!!! AGTTTTGTATTTACTATCAC+TGG + chr5_2:6954994-6955013 None:intergenic 25.0%
!! ATTTTCTATAACTGTTACTG+AGG + chr5_2:6955107-6955126 None:intergenic 25.0%
! TACTAATGATCACATCATTT+AGG - chr5_2:6955973-6955992 Msa0753270:intron 25.0%
! AAGGATTAAAATCTATGTCA+TGG + chr5_2:6956012-6956031 None:intergenic 25.0%
! AAAAGAGAAAAATAACTGTG+CGG + chr5_2:6956074-6956093 None:intergenic 25.0%
! TGATATAAACTATAAAGGCT+AGG + chr5_2:6956134-6956153 None:intergenic 25.0%
!! TTATTAATGTGTTGATGTGT+CGG - chr5_2:6956304-6956323 Msa0753270:intron 25.0%
!! CATACATTTTCTTCTTTTTC+AGG - chr5_2:6956400-6956419 Msa0753270:intron 25.0%
!! AGTTTTTCTTGAAAGATCAA+TGG + chr5_2:6956585-6956604 None:intergenic 25.0%
! CTATGATAAGAAGTTAATGA+AGG - chr5_2:6956972-6956991 Msa0753270:CDS 25.0%
TAGTTACGTTAACAAAAGAG+GGG + chr5_2:6951658-6951677 None:intergenic 30.0%
GTTAGTTACGTTAACAAAAG+AGG + chr5_2:6951660-6951679 None:intergenic 30.0%
GCACAAAATGAATAAAAGAG+GGG + chr5_2:6951691-6951710 None:intergenic 30.0%
CTGCACAAAATGAATAAAAG+AGG + chr5_2:6951693-6951712 None:intergenic 30.0%
!! ATCATCGTTTTTGTTACGTT+TGG + chr5_2:6951855-6951874 None:intergenic 30.0%
GTTTGTAAACGATAGACATT+AGG - chr5_2:6951906-6951925 Msa0753270:CDS 30.0%
AGGATGTAAATTCTCATCAA+AGG - chr5_2:6951926-6951945 Msa0753270:CDS 30.0%
TCATAAAGAATGACAATGAG+AGG - chr5_2:6951994-6952013 Msa0753270:intron 30.0%
CATAAAGAATGACAATGAGA+GGG - chr5_2:6951995-6952014 Msa0753270:intron 30.0%
!!! TTAAGTTATTTTGGTTGCAC+AGG + chr5_2:6952184-6952203 None:intergenic 30.0%
CATATTACAAGAATCAGAAG+CGG + chr5_2:6952491-6952510 None:intergenic 30.0%
ATTACAAACTGCTCTATAGT+TGG - chr5_2:6952574-6952593 Msa0753270:intron 30.0%
GTATGCCGTATACAAATAAA+AGG - chr5_2:6952820-6952839 Msa0753270:CDS 30.0%
!! TGTGTAATTCTAAAACTCCA+GGG + chr5_2:6953125-6953144 None:intergenic 30.0%
TCTTATAAAGCAGACATAAC+AGG - chr5_2:6953174-6953193 Msa0753270:intron 30.0%
CTTATAAAGCAGACATAACA+GGG - chr5_2:6953175-6953194 Msa0753270:intron 30.0%
ATCACATTAATGAAATCCCT+TGG + chr5_2:6953201-6953220 None:intergenic 30.0%
GTGATTGTAGAAACTAGTAA+TGG - chr5_2:6953216-6953235 Msa0753270:intron 30.0%
AGGTATATACATAAACACCA+TGG + chr5_2:6953370-6953389 None:intergenic 30.0%
ATGGTGTTTATGTATATACC+TGG - chr5_2:6953369-6953388 Msa0753270:CDS 30.0%
!!! TATCTTGAGGTTTTAGCTAA+GGG - chr5_2:6953687-6953706 Msa0753270:intron 30.0%
TACTGCTATATTGTTGAGTT+TGG - chr5_2:6953755-6953774 Msa0753270:intron 30.0%
GATGTGATTAAGATTATTCC+GGG - chr5_2:6953837-6953856 Msa0753270:intron 30.0%
AATGTCATTGACATGTAAGT+AGG + chr5_2:6954233-6954252 None:intergenic 30.0%
TTAATCTTCTATCGCTTTGT+AGG - chr5_2:6954251-6954270 Msa0753270:intron 30.0%
! TCTTGATCTCATTTTCAACT+TGG - chr5_2:6954277-6954296 Msa0753270:CDS 30.0%
AAGGAGCTAATCTAATTCTA+AGG + chr5_2:6954543-6954562 None:intergenic 30.0%
GGCTAAAAATTGAACAATGA+TGG - chr5_2:6954592-6954611 Msa0753270:CDS 30.0%
GTTCATTTGATATGAAGAAC+CGG - chr5_2:6954682-6954701 Msa0753270:CDS 30.0%
CAGTCACAAACATATTCAAA+TGG + chr5_2:6954912-6954931 None:intergenic 30.0%
TATTGACAAAAATGGTACTC+CGG - chr5_2:6955013-6955032 Msa0753270:CDS 30.0%
!!! TTTTTTGGCATACTCAACAA+CGG + chr5_2:6955306-6955325 None:intergenic 30.0%
! AGTAATGGAAACAAAATCTC+GGG + chr5_2:6955363-6955382 None:intergenic 30.0%
! CAGTAATGGAAACAAAATCT+CGG + chr5_2:6955364-6955383 None:intergenic 30.0%
! CATTATTTGCTTGTTACGAA+CGG + chr5_2:6955405-6955424 None:intergenic 30.0%
CAAATAATGGTCGGTAATAA+GGG - chr5_2:6955416-6955435 Msa0753270:CDS 30.0%
!! TATGAAAATTAGGAGCATCA+TGG - chr5_2:6955616-6955635 Msa0753270:CDS 30.0%
AGATAAAGTGAAAAACTTGC+AGG - chr5_2:6955730-6955749 Msa0753270:intron 30.0%
AAGAAGTCATACTTGATTTC+AGG + chr5_2:6955862-6955881 None:intergenic 30.0%
TTCATTAATTGTATTCCGCT+AGG + chr5_2:6955909-6955928 None:intergenic 30.0%
ACGCTTTCAATATGAATTGT+CGG + chr5_2:6956254-6956273 None:intergenic 30.0%
! ATTCATATTGAAAGCGTGTT+AGG - chr5_2:6956257-6956276 Msa0753270:intron 30.0%
TATACGCCTCAATTATGTTT+GGG - chr5_2:6956613-6956632 Msa0753270:intron 30.0%
TTCGTTTCGAAAACAAGCTA+AGG + chr5_2:6951390-6951409 None:intergenic 35.0%
!!! TTAGCTTGTTTTCGAAACGA+AGG - chr5_2:6951389-6951408 Msa0753270:three_prime_UTR 35.0%
AAATCCATTAAACGGCTACA+TGG - chr5_2:6951578-6951597 Msa0753270:CDS 35.0%
AATTCCATGTAGCCGTTTAA+TGG + chr5_2:6951585-6951604 None:intergenic 35.0%
! TGTATAATGGCTTCGATTTG+AGG - chr5_2:6951970-6951989 Msa0753270:intron 35.0%
! TTAGGGGTTCTTTAAGTTTG+AGG + chr5_2:6952226-6952245 None:intergenic 35.0%
CAAAGCCAGAAATCTAATCT+TGG - chr5_2:6952342-6952361 Msa0753270:intron 35.0%
GAACACCAAGATTAGATTTC+TGG + chr5_2:6952350-6952369 None:intergenic 35.0%
AGCGGTGCAAAAACAAATTA+GGG - chr5_2:6952398-6952417 Msa0753270:intron 35.0%
CGCTTCTGATTCTTGTAATA+TGG - chr5_2:6952489-6952508 Msa0753270:intron 35.0%
TTCTGTTGCTAAAGCTACTT+GGG + chr5_2:6952914-6952933 None:intergenic 35.0%
TGGCTATGAGTAATGATGTT+TGG + chr5_2:6952958-6952977 None:intergenic 35.0%
CATTACTCATAGCCAAATCT+TGG - chr5_2:6952963-6952982 Msa0753270:CDS 35.0%
!! GTGTGTAATTCTAAAACTCC+AGG + chr5_2:6953126-6953145 None:intergenic 35.0%
AAAATATTTCCCAGTGAAGG+TGG - chr5_2:6953252-6953271 Msa0753270:intron 35.0%
! TCCAGTTTTTCTAACTTCCA+TGG - chr5_2:6953350-6953369 Msa0753270:CDS 35.0%
ACCATGGAAGTTAGAAAAAC+TGG + chr5_2:6953354-6953373 None:intergenic 35.0%
ATCGTGAAGATGCTTACTAT+TGG - chr5_2:6953417-6953436 Msa0753270:CDS 35.0%
TATTGGAGAGGTTATTCGTT+GGG - chr5_2:6953434-6953453 Msa0753270:CDS 35.0%
!!! GCTACTTCTAAGGTTTTTGA+AGG - chr5_2:6953609-6953628 Msa0753270:intron 35.0%
!! TCTGTTAGGAAAGTATCTTG+AGG - chr5_2:6953674-6953693 Msa0753270:intron 35.0%
!!! GTATCTTGAGGTTTTAGCTA+AGG - chr5_2:6953686-6953705 Msa0753270:intron 35.0%
!!! ATCTTGAGGTTTTAGCTAAG+GGG - chr5_2:6953688-6953707 Msa0753270:intron 35.0%
CTCAACAATATAGCAGTATC+AGG + chr5_2:6953753-6953772 None:intergenic 35.0%
GCTATATTGTTGAGTTTGGA+TGG - chr5_2:6953759-6953778 Msa0753270:intron 35.0%
! GGAAGAAATTGATAGTAGGT+TGG - chr5_2:6953803-6953822 Msa0753270:intron 35.0%
! GTGAATGAGAGTATGATAAC+TGG - chr5_2:6953906-6953925 Msa0753270:CDS 35.0%
AGGAAAGGTGATACTGTTAT+CGG - chr5_2:6953951-6953970 Msa0753270:CDS 35.0%
TTCCAAATACTTTGTGCCTT+TGG - chr5_2:6954112-6954131 Msa0753270:CDS 35.0%
! TACCAAAGGCACAAAGTATT+TGG + chr5_2:6954117-6954136 None:intergenic 35.0%
! ATATTTTCCAGCTAAGAACC+AGG + chr5_2:6954307-6954326 None:intergenic 35.0%
! TAGATTAGCTCCTTGAATCA+TGG - chr5_2:6954549-6954568 Msa0753270:CDS 35.0%
CACAGAAAATCCATGATTCA+AGG + chr5_2:6954562-6954581 None:intergenic 35.0%
! CATGGATTTTCTGTGAATGT+TGG - chr5_2:6954567-6954586 Msa0753270:CDS 35.0%
! GATTTTCTGTGAATGTTGGT+TGG - chr5_2:6954571-6954590 Msa0753270:CDS 35.0%
!! AAAATGGAGAAAGTGTTCCT+TGG - chr5_2:6954789-6954808 Msa0753270:CDS 35.0%
!!! TGCATTGTTTTTGACAAGAC+CGG - chr5_2:6954949-6954968 Msa0753270:CDS 35.0%
ATTGACAAAAATGGTACTCC+GGG - chr5_2:6955014-6955033 Msa0753270:CDS 35.0%
CAACAAGTTCATAGAATTCC+CGG + chr5_2:6955035-6955054 None:intergenic 35.0%
!! TGTGTTACTTGTACTGTTCA+TGG - chr5_2:6955183-6955202 Msa0753270:CDS 35.0%
! TTGTACTGTTCATGGACTAT+AGG - chr5_2:6955191-6955210 Msa0753270:CDS 35.0%
!! CGAGATTTTGTTTCCATTAC+TGG - chr5_2:6955362-6955381 Msa0753270:CDS 35.0%
TTTGTTTCCATTACTGGACA+TGG - chr5_2:6955368-6955387 Msa0753270:CDS 35.0%
CGTTCGTAACAAGCAAATAA+TGG - chr5_2:6955403-6955422 Msa0753270:CDS 35.0%
CGTAACAAGCAAATAATGGT+CGG - chr5_2:6955407-6955426 Msa0753270:CDS 35.0%
GCAAATAATGGTCGGTAATA+AGG - chr5_2:6955415-6955434 Msa0753270:CDS 35.0%
AACTGCTAATTCCATTGCAA+GGG - chr5_2:6955658-6955677 Msa0753270:intron 35.0%
ACTTTATCTGCTTTCTGATC+CGG + chr5_2:6955719-6955738 None:intergenic 35.0%
TAATTGTATTCCGCTAGGAT+AGG + chr5_2:6955904-6955923 None:intergenic 35.0%
!! AGAAGGATAATGGGATTTCT+TGG + chr5_2:6956108-6956127 None:intergenic 35.0%
!!! TTTCTTCTTTTTCAGGCTTC+TGG - chr5_2:6956407-6956426 Msa0753270:intron 35.0%
!!! TTCTTCTTTTTCAGGCTTCT+GGG - chr5_2:6956408-6956427 Msa0753270:intron 35.0%
TGTACTAATGAAGAGCAACT+TGG - chr5_2:6956544-6956563 Msa0753270:intron 35.0%
GTATACGCCTCAATTATGTT+TGG - chr5_2:6956612-6956631 Msa0753270:intron 35.0%
CTCAATTATGTTTGGGCTTT+GGG - chr5_2:6956620-6956639 Msa0753270:intron 35.0%
!! GCTTTGGGTTATAATTTGCT+TGG - chr5_2:6956635-6956654 Msa0753270:intron 35.0%
CAATCGTCATGTATGATCAA+AGG + chr5_2:6956851-6956870 None:intergenic 35.0%
GATGTAAGCAGAAAACAACT+TGG - chr5_2:6956994-6957013 Msa0753270:CDS 35.0%
!! CTTGTTTTCGAAACGAAGGA+TGG - chr5_2:6951393-6951412 Msa0753270:three_prime_UTR 40.0%
!! TGGGATAAGAAGGCATTGAA+GGG + chr5_2:6951445-6951464 None:intergenic 40.0%
!! TTGGGATAAGAAGGCATTGA+AGG + chr5_2:6951446-6951465 None:intergenic 40.0%
!! CCGTTTAATGGATTTCTCCA+CGG + chr5_2:6951573-6951592 None:intergenic 40.0%
CCGTGGAGAAATCCATTAAA+CGG - chr5_2:6951570-6951589 Msa0753270:CDS 40.0%
TGACAGTTAAGTCTGTGATG+TGG - chr5_2:6951876-6951895 Msa0753270:CDS 40.0%
CTCATCAAAGGAAGAGTTCA+AGG - chr5_2:6951938-6951957 Msa0753270:CDS 40.0%
GTGTTGAGTATTCGTGTTAG+TGG - chr5_2:6952319-6952338 Msa0753270:intron 40.0%
!!! CTAATTTGTTTTTGCACCGC+TGG + chr5_2:6952399-6952418 None:intergenic 40.0%
CAGCGGTGCAAAAACAAATT+AGG - chr5_2:6952397-6952416 Msa0753270:intron 40.0%
GCGGTGCAAAAACAAATTAG+GGG - chr5_2:6952399-6952418 Msa0753270:intron 40.0%
CAAGCAAAACGCAACAATGT+TGG + chr5_2:6952631-6952650 None:intergenic 40.0%
!!! TTTTAGAGCTGATTCAACCG+CGG + chr5_2:6952869-6952888 None:intergenic 40.0%
CTTCTGTTGCTAAAGCTACT+TGG + chr5_2:6952915-6952934 None:intergenic 40.0%
!! AGTAGCTTTAGCAACAGAAG+AGG - chr5_2:6952915-6952934 Msa0753270:CDS 40.0%
CATCTACAGCTTCCAAGATT+TGG + chr5_2:6952978-6952997 None:intergenic 40.0%
ATCTTCGACGAGTTTGATCA+TGG + chr5_2:6953088-6953107 None:intergenic 40.0%
GCGAAAATATTTCCCAGTGA+AGG - chr5_2:6953249-6953268 Msa0753270:intron 40.0%
GAAGATGCTTACTATTGGAG+AGG - chr5_2:6953422-6953441 Msa0753270:CDS 40.0%
CTATTGGAGAGGTTATTCGT+TGG - chr5_2:6953433-6953452 Msa0753270:CDS 40.0%
! ACACCAGTGCAGTTCATTTT+CGG - chr5_2:6953465-6953484 Msa0753270:intron 40.0%
! TTCGGGTGGCGATTTTATAT+TGG - chr5_2:6953483-6953502 Msa0753270:intron 40.0%
GCTTATAAATCATTGCGTCG+TGG - chr5_2:6953507-6953526 Msa0753270:intron 40.0%
! GGGAGGAAGAAATTGATAGT+AGG - chr5_2:6953799-6953818 Msa0753270:intron 40.0%
GTGCAAAAGTTGCTTCTGAT+GGG - chr5_2:6953859-6953878 Msa0753270:intron 40.0%
!! TTCTGATGGGCTTGTTGTTT+GGG - chr5_2:6953872-6953891 Msa0753270:intron 40.0%
! TGAGAGTATGATAACTGGTG+AGG - chr5_2:6953911-6953930 Msa0753270:CDS 40.0%
AAAGGTGATACTGTTATCGG+TGG - chr5_2:6953954-6953973 Msa0753270:CDS 40.0%
GGTGGAACTTTGAATGAGAA+TGG - chr5_2:6953972-6953991 Msa0753270:CDS 40.0%
GAATGGTGTCTTGCATGTTA+AGG - chr5_2:6953989-6954008 Msa0753270:CDS 40.0%
! ACTTGTTGAGTCTGCTCAAA+TGG - chr5_2:6954055-6954074 Msa0753270:CDS 40.0%
AAATGCGATCAGCAAACTTC+TGG + chr5_2:6954094-6954113 None:intergenic 40.0%
! GCAGTTTGGAATTTCTGTCA+TGG - chr5_2:6954383-6954402 Msa0753270:CDS 40.0%
! TCTCAGGGTGTATTGATCAA+AGG - chr5_2:6954477-6954496 Msa0753270:CDS 40.0%
! AGGGTGTATTGATCAAAGGA+GGG - chr5_2:6954481-6954500 Msa0753270:CDS 40.0%
!! AGCTTTGGAAAGTGCACATA+AGG - chr5_2:6954506-6954525 Msa0753270:CDS 40.0%
!! GACAAATGGACTAATTGGCA+TGG + chr5_2:6954618-6954637 None:intergenic 40.0%
TATGCTGCAACAAGTATCCA+AGG + chr5_2:6954834-6954853 None:intergenic 40.0%
! GTTTGTGACTGTCTTGTTGT+AGG - chr5_2:6954921-6954940 Msa0753270:CDS 40.0%
AAGACCGGTACTCTTACTAT+TGG - chr5_2:6954964-6954983 Msa0753270:CDS 40.0%
AGACCGGTACTCTTACTATT+GGG - chr5_2:6954965-6954984 Msa0753270:CDS 40.0%
! CTTCCCAATAGTAAGAGTAC+CGG + chr5_2:6954971-6954990 None:intergenic 40.0%
!! TCAGCCTTTTAGAAGGAGAT+GGG + chr5_2:6955083-6955102 None:intergenic 40.0%
! AACTGTTGTTTGTCCATCTC+AGG - chr5_2:6955253-6955272 Msa0753270:CDS 40.0%
AAGATGAAGAGAACCCTTCT+TGG - chr5_2:6955330-6955349 Msa0753270:CDS 40.0%
CTTTACTCCATGTCCAGTAA+TGG + chr5_2:6955378-6955397 None:intergenic 40.0%
CATTACTGGACATGGAGTAA+AGG - chr5_2:6955376-6955395 Msa0753270:CDS 40.0%
! TATTTGCTTGTTACGAACGG+TGG + chr5_2:6955402-6955421 None:intergenic 40.0%
! TCCTGTTTGAGCCATGTTTT+CGG + chr5_2:6955501-6955520 None:intergenic 40.0%
TCTATAAATGGGGAAGTAGC+TGG - chr5_2:6955530-6955549 Msa0753270:CDS 40.0%
CTATAAATGGGGAAGTAGCT+GGG - chr5_2:6955531-6955550 Msa0753270:CDS 40.0%
TATAAATGGGGAAGTAGCTG+GGG - chr5_2:6955532-6955551 Msa0753270:CDS 40.0%
ATATCTGATCCACTGAAACC+AGG - chr5_2:6955563-6955582 Msa0753270:CDS 40.0%
GAACTGCTAATTCCATTGCA+AGG - chr5_2:6955657-6955676 Msa0753270:intron 40.0%
AATTCCATTGCAAGGGAAGT+TGG - chr5_2:6955665-6955684 Msa0753270:intron 40.0%
AATTCCAACTTCCCTTGCAA+TGG + chr5_2:6955672-6955691 None:intergenic 40.0%
TGTTATTGCTGAAGCCAAAC+CGG - chr5_2:6955697-6955716 Msa0753270:intron 40.0%
TTCAGGAGATGATAGTTGTC+AGG + chr5_2:6955845-6955864 None:intergenic 40.0%
CAGTAACAATCCTATCCTAG+CGG - chr5_2:6955891-6955910 Msa0753270:intron 40.0%
GAGAAAAATAACTGTGCGGT+TGG + chr5_2:6956070-6956089 None:intergenic 40.0%
GCTAGGAACAGAAGGATAAT+GGG + chr5_2:6956117-6956136 None:intergenic 40.0%
CTATAAAGGCTAGGAACAGA+AGG + chr5_2:6956125-6956144 None:intergenic 40.0%
ACAAACACCAGAGATGATAG+TGG + chr5_2:6956332-6956351 None:intergenic 40.0%
ACTAATGAAGAGCAACTTGG+AGG - chr5_2:6956547-6956566 Msa0753270:intron 40.0%
CCAAAGCCCAAACATAATTG+AGG + chr5_2:6956622-6956641 None:intergenic 40.0%
CCTCAATTATGTTTGGGCTT+TGG - chr5_2:6956619-6956638 Msa0753270:intron 40.0%
AAAAGAACTCCAGCTGCTAT+TGG + chr5_2:6956665-6956684 None:intergenic 40.0%
! TTTTCCCTTCTACAGGCTTT+CGG - chr5_2:6956681-6956700 Msa0753270:intron 40.0%
TCCATGGACAGAGAAAAGTC+CGG + chr5_2:6951525-6951544 None:intergenic 45.0%
! GTTCTTGACCTTTTGTCCAG+CGG - chr5_2:6952380-6952399 Msa0753270:intron 45.0%
! TTTTTGCACCGCTGGACAAA+AGG + chr5_2:6952391-6952410 None:intergenic 45.0%
TGCTCTATAGTTGGAGACGT+TGG - chr5_2:6952583-6952602 Msa0753270:intron 45.0%
ATAGGAGGAGGCTATTTGTG+AGG - chr5_2:6952732-6952751 Msa0753270:CDS 45.0%
TTGGAAGCTGTAGATGAAGC+TGG - chr5_2:6952982-6953001 Msa0753270:CDS 45.0%
AAGCAAAATCGATCTCCACG+TGG - chr5_2:6953041-6953060 Msa0753270:CDS 45.0%
AAAATCGATCTCCACGTGGA+AGG - chr5_2:6953045-6953064 Msa0753270:CDS 45.0%
TCTCTTCTTCCACCTTCACT+GGG + chr5_2:6953264-6953283 None:intergenic 45.0%
ATCTCTTCTTCCACCTTCAC+TGG + chr5_2:6953265-6953284 None:intergenic 45.0%
! CACCAGTGCAGTTCATTTTC+GGG - chr5_2:6953466-6953485 Msa0753270:intron 45.0%
! TATGGATGTGCTGATAGCAC+TGG - chr5_2:6953539-6953558 Msa0753270:intron 45.0%
! ATGGATGTGCTGATAGCACT+GGG - chr5_2:6953540-6953559 Msa0753270:intron 45.0%
! TTTGAGGGCTGCTACTTCTA+AGG - chr5_2:6953599-6953618 Msa0753270:intron 45.0%
TTGTTGAGTTTGGATGGCGA+AGG - chr5_2:6953765-6953784 Msa0753270:intron 45.0%
TGTTGAGTTTGGATGGCGAA+GGG - chr5_2:6953766-6953785 Msa0753270:intron 45.0%
ATGGCGAAGGGAATGTTGTT+GGG - chr5_2:6953778-6953797 Msa0753270:intron 45.0%
! TCAGAAGCAACTTTTGCACC+CGG + chr5_2:6953858-6953877 None:intergenic 45.0%
GGTGCAAAAGTTGCTTCTGA+TGG - chr5_2:6953858-6953877 Msa0753270:intron 45.0%
!! CTTCTGATGGGCTTGTTGTT+TGG - chr5_2:6953871-6953890 Msa0753270:intron 45.0%
!! TCTGATGGGCTTGTTGTTTG+GGG - chr5_2:6953873-6953892 Msa0753270:intron 45.0%
TCACCTTTCCTCTTAGACAC+AGG + chr5_2:6953942-6953961 None:intergenic 45.0%
CTTGCATGTTAAGGCAACGA+AGG - chr5_2:6953998-6954017 Msa0753270:CDS 45.0%
CATGTTAAGGCAACGAAGGT+TGG - chr5_2:6954002-6954021 Msa0753270:CDS 45.0%
!!! CATTTTCAACTTGGCTTGCC+TGG - chr5_2:6954286-6954305 Msa0753270:CDS 45.0%
ATCATGCTTACCCGAAATCC+TGG - chr5_2:6954325-6954344 Msa0753270:CDS 45.0%
AAGACGGTATCCAGGATTTC+GGG + chr5_2:6954338-6954357 None:intergenic 45.0%
GAAGACGGTATCCAGGATTT+CGG + chr5_2:6954339-6954358 None:intergenic 45.0%
TCAAAGCTGTCCATGGAAGA+CGG + chr5_2:6954354-6954373 None:intergenic 45.0%
! TTTGAGCTTGCTCTGCAGTT+TGG - chr5_2:6954369-6954388 Msa0753270:CDS 45.0%
TGGCTAAACCCAAAGCACAA+GGG + chr5_2:6954419-6954438 None:intergenic 45.0%
AACCATAACAGCAGTAGGTG+TGG + chr5_2:6954439-6954458 None:intergenic 45.0%
ACACCTACTGCTGTTATGGT+TGG - chr5_2:6954438-6954457 Msa0753270:CDS 45.0%
! CAGGGTGTATTGATCAAAGG+AGG - chr5_2:6954480-6954499 Msa0753270:CDS 45.0%
!! AGCCTTTTAGAAGGAGATGG+GGG + chr5_2:6955081-6955100 None:intergenic 45.0%
!! CAGCCTTTTAGAAGGAGATG+GGG + chr5_2:6955082-6955101 None:intergenic 45.0%
!! CTCAGCCTTTTAGAAGGAGA+TGG + chr5_2:6955084-6955103 None:intergenic 45.0%
TGTTCACTGTTCACCTGAGA+TGG + chr5_2:6955269-6955288 None:intergenic 45.0%
CAGTGAACATCCACTAGCTA+AGG - chr5_2:6955280-6955299 Msa0753270:CDS 45.0%
GAAACAAAATCTCGGGCTTC+TGG + chr5_2:6955356-6955375 None:intergenic 45.0%
AGTAGATCTTCAGCAACAGC+AGG + chr5_2:6955470-6955489 None:intergenic 45.0%
! ACTTGCTGAAGCCGAAAACA+TGG - chr5_2:6955487-6955506 Msa0753270:CDS 45.0%
GAAATCACTTCTTGAGCACC+TGG + chr5_2:6955584-6955603 None:intergenic 45.0%
!! ATTAGGAGCATCATGGTGAC+TGG - chr5_2:6955623-6955642 Msa0753270:CDS 45.0%
ATCTGCTTTCTGATCCGGTT+TGG + chr5_2:6955714-6955733 None:intergenic 45.0%
GGCTAGGAACAGAAGGATAA+TGG + chr5_2:6956118-6956137 None:intergenic 45.0%
!! TTTTCAGGCTTCTGGGTACA+CGG - chr5_2:6956415-6956434 Msa0753270:intron 45.0%
! TGGCACAGACATTGCTATTG+AGG - chr5_2:6956511-6956530 Msa0753270:intron 45.0%
! GGAGTTCTTTTCCCTTCTAC+AGG - chr5_2:6956674-6956693 Msa0753270:intron 45.0%
GCAAACAACACTGACAGAAG+AGG + chr5_2:6956741-6956760 None:intergenic 45.0%
TCAAGGCTGTTCAGCTTCTT+GGG + chr5_2:6956794-6956813 None:intergenic 45.0%
AAGCTGAACAGCCTTGACAT+AGG - chr5_2:6956797-6956816 Msa0753270:CDS 45.0%
AGCTGAACAGCCTTGACATA+GGG - chr5_2:6956798-6956817 Msa0753270:CDS 45.0%
TCAATATGCCCCCTATGTCA+AGG + chr5_2:6956811-6956830 None:intergenic 45.0%
CTAGCTGCACACAGTAGAAA+TGG + chr5_2:6956897-6956916 None:intergenic 45.0%
CATTTCTACTGTGTGCAGCT+AGG - chr5_2:6956895-6956914 Msa0753270:CDS 45.0%
!!! TTATTTAATTTTATTTTCAT+AGG - chr5_2:6952714-6952733 Msa0753270:CDS 5.0%
GCCTTCTTATCCCAAAGACG+AGG - chr5_2:6951451-6951470 Msa0753270:three_prime_UTR 50.0%
!! GCCTCGTCTTTGGGATAAGA+AGG + chr5_2:6951455-6951474 None:intergenic 50.0%
TCTTATCCCAAAGACGAGGC+AGG - chr5_2:6951455-6951474 Msa0753270:three_prime_UTR 50.0%
CTTATCCCAAAGACGAGGCA+GGG - chr5_2:6951456-6951475 Msa0753270:three_prime_UTR 50.0%
ATGGAGGTTTCCAAGGTCAC+CGG - chr5_2:6951503-6951522 Msa0753270:three_prime_UTR 50.0%
AGAGAAAAGTCCGGTGACCT+TGG + chr5_2:6951516-6951535 None:intergenic 50.0%
! ACCGGACTTTTCTCTGTCCA+TGG - chr5_2:6951521-6951540 Msa0753270:exon 50.0%
AAGCGGAGCAAGTCATTCCA+TGG + chr5_2:6951541-6951560 None:intergenic 50.0%
AAGAGGGGTGAAAGATGACG+CGG + chr5_2:6951643-6951662 None:intergenic 50.0%
GACAATGAGAGGGTCAGAGT+TGG - chr5_2:6952005-6952024 Msa0753270:intron 50.0%
CAAGAATCAGAAGCGGAGCT+AGG + chr5_2:6952484-6952503 None:intergenic 50.0%
GTTGGAGACGTTGGCATACT+AGG - chr5_2:6952592-6952611 Msa0753270:intron 50.0%
TGTGAGGCAATTGAAGACGC+TGG - chr5_2:6952748-6952767 Msa0753270:CDS 50.0%
TGAAGACGCTGGATTTGACG+CGG - chr5_2:6952759-6952778 Msa0753270:CDS 50.0%
!! TCAGCTCTAAAAGCCCTTCC+TGG - chr5_2:6952877-6952896 Msa0753270:CDS 50.0%
AAAGCCCTTCCTGGAGTTGT+TGG - chr5_2:6952886-6952905 Msa0753270:CDS 50.0%
TGTTGAGATCACCTTCCACG+TGG + chr5_2:6953059-6953078 None:intergenic 50.0%
GATTCTCTTCGATCACTCCC+TGG - chr5_2:6953105-6953124 Msa0753270:CDS 50.0%
AAGCAGACATAACAGGGCCA+AGG - chr5_2:6953181-6953200 Msa0753270:intron 50.0%
AGCAGACATAACAGGGCCAA+GGG - chr5_2:6953182-6953201 Msa0753270:intron 50.0%
CACCCGAAAATGAACTGCAC+TGG + chr5_2:6953471-6953490 None:intergenic 50.0%
!! CAGTGCAGTTCATTTTCGGG+TGG - chr5_2:6953469-6953488 Msa0753270:intron 50.0%
! GCGTCGTGGTTCTGCTAATA+TGG - chr5_2:6953521-6953540 Msa0753270:intron 50.0%
GATGGCGAAGGGAATGTTGT+TGG - chr5_2:6953777-6953796 Msa0753270:intron 50.0%
TGGCGAAGGGAATGTTGTTG+GGG - chr5_2:6953779-6953798 Msa0753270:intron 50.0%
CGTCCTGTGTCTAAGAGGAA+AGG - chr5_2:6953936-6953955 Msa0753270:CDS 50.0%
CGATCAGCAAACTTCTGGAC+AGG + chr5_2:6954089-6954108 None:intergenic 50.0%
ATCCTGGATACCGTCTTCCA+TGG - chr5_2:6954341-6954360 Msa0753270:CDS 50.0%
AGCAAGCTCAAAGCTGTCCA+TGG + chr5_2:6954361-6954380 None:intergenic 50.0%
TATTGCCTGCCCTTGTGCTT+TGG - chr5_2:6954407-6954426 Msa0753270:CDS 50.0%
ATTGCCTGCCCTTGTGCTTT+GGG - chr5_2:6954408-6954427 Msa0753270:CDS 50.0%
TAAACCCAAAGCACAAGGGC+AGG + chr5_2:6954415-6954434 None:intergenic 50.0%
GTGGCTAAACCCAAAGCACA+AGG + chr5_2:6954420-6954439 None:intergenic 50.0%
AGCCACACCTACTGCTGTTA+TGG - chr5_2:6954434-6954453 Msa0753270:CDS 50.0%
GTGCCAACCATAACAGCAGT+AGG + chr5_2:6954444-6954463 None:intergenic 50.0%
ACTGCTGTTATGGTTGGCAC+TGG - chr5_2:6954444-6954463 Msa0753270:CDS 50.0%
! GTTATGGTTGGCACTGGAGT+TGG - chr5_2:6954450-6954469 Msa0753270:CDS 50.0%
!! ACTGGAGTTGGTGCATCTCA+GGG - chr5_2:6954462-6954481 Msa0753270:CDS 50.0%
GATCAAAGGAGGGCAAGCTT+TGG - chr5_2:6954491-6954510 Msa0753270:CDS 50.0%
CACGCTGCAACAAGTATCCA+AGG + chr5_2:6954809-6954828 None:intergenic 50.0%
! ACTTGTTGCAGCGTGTTCCT+TGG - chr5_2:6954814-6954833 Msa0753270:CDS 50.0%
!! TGAACTTGTTGCTGCAGCTG+AGG - chr5_2:6955044-6955063 Msa0753270:CDS 50.0%
!! GCCTTTTAGAAGGAGATGGG+GGG + chr5_2:6955080-6955099 None:intergenic 50.0%
! CTGAGGCTCAGCCTTTTAGA+AGG + chr5_2:6955090-6955109 None:intergenic 50.0%
TCAACAACGGCCTTAGCTAG+TGG + chr5_2:6955293-6955312 None:intergenic 50.0%
GGTCGGTAATAAGGGCTTGA+TGG - chr5_2:6955424-6955443 Msa0753270:CDS 50.0%
GCCGAAAACATGGCTCAAAC+AGG - chr5_2:6955497-6955516 Msa0753270:CDS 50.0%
TCTTGAGCACCTGGTTTCAG+TGG + chr5_2:6955575-6955594 None:intergenic 50.0%
TCATGGTGACTGGAGACAAC+TGG - chr5_2:6955633-6955652 Msa0753270:CDS 50.0%
CATGGTGACTGGAGACAACT+GGG - chr5_2:6955634-6955653 Msa0753270:CDS 50.0%
ATGGTGACTGGAGACAACTG+GGG - chr5_2:6955635-6955654 Msa0753270:CDS 50.0%
ACATCTGCTGCTACAAGTGC+AGG + chr5_2:6956473-6956492 None:intergenic 50.0%
TGCACTTGTAGCAGCAGATG+TGG - chr5_2:6956472-6956491 Msa0753270:intron 50.0%
GCACTTGTAGCAGCAGATGT+GGG - chr5_2:6956473-6956492 Msa0753270:intron 50.0%
TGTAGCAGCAGATGTGGGAA+TGG - chr5_2:6956478-6956497 Msa0753270:intron 50.0%
GCAGATGTGGGAATGGCAAT+AGG - chr5_2:6956485-6956504 Msa0753270:intron 50.0%
CTTGGCATTCCAATAGCAGC+TGG - chr5_2:6956653-6956672 Msa0753270:intron 50.0%
GCAACCGAAAGCCTGTAGAA+GGG + chr5_2:6956688-6956707 None:intergenic 50.0%
GTCAAGGCTGTTCAGCTTCT+TGG + chr5_2:6956795-6956814 None:intergenic 50.0%
GCTGAACAGCCTTGACATAG+GGG - chr5_2:6956799-6956818 Msa0753270:CDS 50.0%
CTGAACAGCCTTGACATAGG+GGG - chr5_2:6956800-6956819 Msa0753270:CDS 50.0%
CTTGTCCCTGCCTCGTCTTT+GGG + chr5_2:6951464-6951483 None:intergenic 55.0%
ACTTGTCCCTGCCTCGTCTT+TGG + chr5_2:6951465-6951484 None:intergenic 55.0%
CTTGGAAACCTCCATGGCAG+AGG + chr5_2:6951498-6951517 None:intergenic 55.0%
CTCTGCCATGGAGGTTTCCA+AGG - chr5_2:6951496-6951515 Msa0753270:three_prime_UTR 55.0%
GGTGACCTTGGAAACCTCCA+TGG + chr5_2:6951504-6951523 None:intergenic 55.0%
!! ATGACTTGCTCCGCTTGTGC+TGG - chr5_2:6951545-6951564 Msa0753270:CDS 55.0%
AGAGGGGTGAAAGATGACGC+GGG + chr5_2:6951642-6951661 None:intergenic 55.0%
! GAGGGTCAGAGTTGGTTGCA+AGG - chr5_2:6952013-6952032 Msa0753270:intron 55.0%
! TAGAGCTGATTCAACCGCGG+TGG + chr5_2:6952866-6952885 None:intergenic 55.0%
GGCTCCAACAACTCCAGGAA+GGG + chr5_2:6952893-6952912 None:intergenic 55.0%
ACTTGGGCTCCAACAACTCC+AGG + chr5_2:6952898-6952917 None:intergenic 55.0%
CGAAGGGAATGTTGTTGGGG+AGG - chr5_2:6953782-6953801 Msa0753270:intron 55.0%
AGGCACGTCCTGTGTCTAAG+AGG - chr5_2:6953931-6953950 Msa0753270:CDS 55.0%
! TGGCTTGCCTGGTTCTTAGC+TGG - chr5_2:6954297-6954316 Msa0753270:CDS 55.0%
GTCCATGGAAGACGGTATCC+AGG + chr5_2:6954346-6954365 None:intergenic 55.0%
!! CACTGGAGTTGGTGCATCTC+AGG - chr5_2:6954461-6954480 Msa0753270:CDS 55.0%
GCCCCCCATCTCCTTCTAAA+AGG - chr5_2:6955076-6955095 Msa0753270:CDS 55.0%
!! GTCGGTGCCACTATCATCTC+TGG - chr5_2:6956322-6956341 Msa0753270:intron 55.0%
TTCTGGGTACACGGTGGCTA+TGG - chr5_2:6956424-6956443 Msa0753270:intron 55.0%
GTGGGAATGGCAATAGGTGC+TGG - chr5_2:6956491-6956510 Msa0753270:intron 55.0%
GGCAACCGAAAGCCTGTAGA+AGG + chr5_2:6956689-6956708 None:intergenic 55.0%
ATAGCAGCTCCAGCGATCCA+AGG + chr5_2:6956713-6956732 None:intergenic 55.0%
TTGGATCGCTGGAGCTGCTA+TGG - chr5_2:6956712-6956731 Msa0753270:intron 55.0%
GACGAGGCAGGGACAAGTAC+CGG - chr5_2:6951467-6951486 Msa0753270:three_prime_UTR 60.0%
AAACCTCCATGGCAGAGGCG+GGG + chr5_2:6951493-6951512 None:intergenic 60.0%
GAAACCTCCATGGCAGAGGC+GGG + chr5_2:6951494-6951513 None:intergenic 60.0%
GGAAACCTCCATGGCAGAGG+CGG + chr5_2:6951495-6951514 None:intergenic 60.0%
CTCCACGGATCCAGCACAAG+CGG + chr5_2:6951558-6951577 None:intergenic 60.0%
GGTGAAAGATGACGCGGGCA+CGG + chr5_2:6951637-6951656 None:intergenic 60.0%
ATGCACGTCGTGTTCCACCG+CGG - chr5_2:6952849-6952868 Msa0753270:CDS 60.0%
GGGCTCCAACAACTCCAGGA+AGG + chr5_2:6952894-6952913 None:intergenic 60.0%
CTCGGGCTTCTGGCCAAGAA+GGG + chr5_2:6955346-6955365 None:intergenic 60.0%
TCTCGGGCTTCTGGCCAAGA+AGG + chr5_2:6955347-6955366 None:intergenic 60.0%
TCAGGCTTCTGGGTACACGG+TGG - chr5_2:6956418-6956437 Msa0753270:intron 60.0%
GGGTACACGGTGGCTATGGT+CGG - chr5_2:6956428-6956447 Msa0753270:intron 60.0%
CTCCGCTTGTGCTGGATCCG+TGG - chr5_2:6951553-6951572 Msa0753270:CDS 65.0%
ACGGTGGCTATGGTCGGCGA+CGG - chr5_2:6956434-6956453 Msa0753270:intron 65.0%
CAGGCTTTCGGTTGCCGCCT+TGG - chr5_2:6956693-6956712 Msa0753270:intron 65.0%
GCAGCTCCAGCGATCCAAGG+CGG + chr5_2:6956710-6956729 None:intergenic 65.0%
CGGTTGCCGCCTTGGATCGC+TGG - chr5_2:6956701-6956720 Msa0753270:intron 70.0%
TACCGGCCCCGCCTCTGCCA+TGG - chr5_2:6951484-6951503 Msa0753270:three_prime_UTR 75.0%
CTCCATGGCAGAGGCGGGGC+CGG + chr5_2:6951489-6951508 None:intergenic 75.0%
! CGGCCCCGCCTCTGCCATGG+AGG - chr5_2:6951487-6951506 Msa0753270:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 6951371 6957034 6951371 ID=Msa0753270;Name=Msa0753270
chr5_2 mRNA 6951371 6957034 6951371 ID=Msa0753270-mRNA-1;Parent=Msa0753270;Name=Msa0753270-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.8|0.83|1|1|1|6|163|984
chr5_2 exon 6951371 6951983 6951371 ID=Msa0753270-mRNA-1:exon:3068;Parent=Msa0753270-mRNA-1
chr5_2 exon 6952654 6953130 6952654 ID=Msa0753270-mRNA-1:exon:3067;Parent=Msa0753270-mRNA-1
chr5_2 exon 6953340 6953462 6953340 ID=Msa0753270-mRNA-1:exon:3066;Parent=Msa0753270-mRNA-1
chr5_2 exon 6953878 6954132 6953878 ID=Msa0753270-mRNA-1:exon:3065;Parent=Msa0753270-mRNA-1
chr5_2 exon 6954272 6955669 6954272 ID=Msa0753270-mRNA-1:exon:3064;Parent=Msa0753270-mRNA-1
chr5_2 exon 6956783 6957034 6956783 ID=Msa0753270-mRNA-1:exon:3063;Parent=Msa0753270-mRNA-1
chr5_2 CDS 6956783 6957034 6956783 ID=Msa0753270-mRNA-1:cds;Parent=Msa0753270-mRNA-1
chr5_2 CDS 6954272 6955669 6954272 ID=Msa0753270-mRNA-1:cds;Parent=Msa0753270-mRNA-1
chr5_2 CDS 6953878 6954132 6953878 ID=Msa0753270-mRNA-1:cds;Parent=Msa0753270-mRNA-1
chr5_2 CDS 6953340 6953462 6953340 ID=Msa0753270-mRNA-1:cds;Parent=Msa0753270-mRNA-1
chr5_2 CDS 6952654 6953130 6952654 ID=Msa0753270-mRNA-1:cds;Parent=Msa0753270-mRNA-1
chr5_2 CDS 6951534 6951983 6951534 ID=Msa0753270-mRNA-1:cds;Parent=Msa0753270-mRNA-1
chr5_2 three_prime_UTR 6951371 6951533 6951371 ID=Msa0753270-mRNA-1:three_prime_utr;Parent=Msa0753270-mRNA-1
Gene Sequence

>Msa0753270

ATGGCGAAGCTATTATCCTTAGCTTGTTTTCGAAACGAAGGATGGCACAATCTTTCAGCTCGATCTCACTACCCTTCAATGCCTTCTTATCCCAAAGACGAGGCAGGGACAAGTACCGGCCCCGCCTCTGCCATGGAGGTTTCCAAGGTCACCGGACTTTTCTCTGTCCATGGAATGACTTGCTCCGCTTGTGCTGGATCCGTGGAGAAATCCATTAAACGGCTACATGGAATTCATGAAGCTGTTGTTGATGAGGAGGCTATTTGTGAGGCAATTGAAGACGCTGGATTTGACGCGGCATTATTAACAGATGTAACGAATGAGAACACTATTCAAGTATGCCGTATACAAATAAAAGGAATGACATGCACGTCGTGTTCCACCGCGGTTGAATCAGCTCTAAAAGCCCTTCCTGGAGTTGTTGGAGCCCAAGTAGCTTTAGCAACAGAAGAGGCTCAAGTTCATTACAATCCAAACATCATTACTCATAGCCAAATCTTGGAAGCTGTAGATGAAGCTGGATTTGAAGCAACACTCATTAGTTCAAGTGAAGACTTAAGCAAAATCGATCTCCACGTGGAAGGTGATCTCAACAATAATGCCATGATCAAACTCGTCGAAGATTCTCTTCGATCACTCCCTGGAGTTTTAGAATTACACACCAATCTCGAATTCAACAAAATTTCGCTTTCTTATAAAGCAGACATAACAGGGCCAAGGGATTTCATTAATGTGATTGTAGAAACTAGTAATGGAAATTTGAAGGCGAAAATATTTCCCAGTGAAGGTGGAAGAAGAGATACTCATAGAAAAAAGGAAATTAAAAGCTATTACAAATCTTTTTTATGGAGTTTGGTGTTTACTATTCCAGTTTTTCTAACTTCCATGGTGTTTATGTATATACCTGGAATAAAAAATTTATTGGATTCGAAAATCGTGAAGATGCTTACTATTGGAGAGGTTATTCGTTGGGTGCTTGCGACACCAGTGCAGTTCATTTTCGGGTGGCGATTTTATATTGGTGCTTATAAATCATTGCGTCGTGGTTCTGCTAATATGGATGTGCTGATAGCACTGGGAACAAATGCAGCTTATTTCTATTCTGTTTATTCTGTTTTGAGGGCTGCTACTTCTAAGGTTTTTGAAGGTACTGATTTCTTTGAGACTAGTGCGATGCTTATTTCGTTTATTCTGTTAGGAAAGTATCTTGAGGTTTTAGCTAAGGGGAAAACATCGAATGCGATTGCGAAGCTAATGAATTTGACACCTGATACTGCTATATTGTTGAGTTTGGATGGCGAAGGGAATGTTGTTGGGGAGGAAGAAATTGATAGTAGGTTGGTTCAGAAGAATGATGTGATTAAGATTATTCCGGGTGCAAAAGTTGCTTCTGATGGGCTTGTTGTTTGGGGACAGAGTCATGTGAATGAGAGTATGATAACTGGTGAGGCACGTCCTGTGTCTAAGAGGAAAGGTGATACTGTTATCGGTGGAACTTTGAATGAGAATGGTGTCTTGCATGTTAAGGCAACGAAGGTTGGATCAGAAAGTGCTCTTTCACAGATTGTTAGACTTGTTGAGTCTGCTCAAATGGCTAAAGCTCCTGTCCAGAAGTTTGCTGATCGCATTTCCAAATACTTTGTGCCTTTGGTGATCTTGATCTCATTTTCAACTTGGCTTGCCTGGTTCTTAGCTGGAAAATATCATGCTTACCCGAAATCCTGGATACCGTCTTCCATGGACAGCTTTGAGCTTGCTCTGCAGTTTGGAATTTCTGTCATGGTTATTGCCTGCCCTTGTGCTTTGGGTTTAGCCACACCTACTGCTGTTATGGTTGGCACTGGAGTTGGTGCATCTCAGGGTGTATTGATCAAAGGAGGGCAAGCTTTGGAAAGTGCACATAAGGTAAACTGCATTGTTTTTGACAAGACCGGTACTCTTACTATTGGGAAGCCAGTGATAGTAAATACAAAACTATTGACAAAAATGGTACTCCGGGAATTCTATGAACTTGTTGCTGCAGCTGAGGTGAACAGTGAACATCCACTAGCTAAGGCCGTTGTTGAGTATGCCAAAAAATTTAAAGATGAAGAGAACCCTTCTTGGCCAGAAGCCCGAGATTTTGTTTCCATTACTGGACATGGAGTAAAGGCCACCGTTCGTAACAAGCAAATAATGGTCGGTAATAAGGGCTTGATGGTTGAACATAATATTTCAATTCCTGCTGTTGCTGAAGATCTACTTGCTGAAGCCGAAAACATGGCTCAAACAGGAATTTTAGTATCTATAAATGGGGAAGTAGCTGGGGTTTTAGCAATATCTGATCCACTGAAACCAGGTGCTCAAGAAGTGATTTCCATTCTAAAGTCTATGAAAATTAGGAGCATCATGGTGACTGGAGACAACTGGGGAACTGCTAATTCCATTGCAAGGGAAGTTGGAATTGACGATGTTATTGCTGAAGCCAAACCGGATCAGAAAGCAGATAAAGTGAAAAACTTGCAGGCTTCTGGGTACACGGTGGCTATGGTCGGCGACGGTATCAATGATTCACCTGCACTTGTAGCAGCAGATGTGGGAATGGCAATAGGTGCTGGCACAGACATTGCTATTGAGGCAGCTGATATTGTACTAATGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGATCTTTCAAGAAAAACTTTATTTCGTATACGCCTCAATTATGTTTGGGCTTTGGGTTATAATTTGCTTGGCATTCCAATAGCAGCTGGAGTTCTTTTCCCTTCTACAGGCTTTCGGTTGCCGCCTTGGATCGCTGGAGCTGCTATGGCTGCCTCTTCTGTCAGTGTTGTTTGCTGTTCTCTGTTGTTGAAATATTACAAGAGACCCAAGAAGCTGAACAGCCTTGACATAGGGGGCATATTGATCGAGACATCGAGTGATCCTTTGATCATACATGACGATTGA
Protein sequence

>Msa0753270

MAKLLSLACFRNEGWHNLSARSHYPSMPSYPKDEAGTSTGPASAMEVSKVTGLFSVHGMTCSACAGSVEKSIKRLHGIHEAVVDEEAICEAIEDAGFDAALLTDVTNENTIQVCRIQIKGMTCTSCSTAVESALKALPGVVGAQVALATEEAQVHYNPNIITHSQILEAVDEAGFEATLISSSEDLSKIDLHVEGDLNNNAMIKLVEDSLRSLPGVLELHTNLEFNKISLSYKADITGPRDFINVIVETSNGNLKAKIFPSEGGRRDTHRKKEIKSYYKSFLWSLVFTIPVFLTSMVFMYIPGIKNLLDSKIVKMLTIGEVIRWVLATPVQFIFGWRFYIGAYKSLRRGSANMDVLIALGTNAAYFYSVYSVLRAATSKVFEGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPDTAILLSLDGEGNVVGEEEIDSRLVQKNDVIKIIPGAKVASDGLVVWGQSHVNESMITGEARPVSKRKGDTVIGGTLNENGVLHVKATKVGSESALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVILISFSTWLAWFLAGKYHAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVIVNTKLLTKMVLREFYELVAAAEVNSEHPLAKAVVEYAKKFKDEENPSWPEARDFVSITGHGVKATVRNKQIMVGNKGLMVEHNISIPAVAEDLLAEAENMAQTGILVSINGEVAGVLAISDPLKPGAQEVISILKSMKIRSIMVTGDNWGTANSIAREVGIDDVIAEAKPDQKADKVKNLQASGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTLFRIRLNYVWALGYNLLGIPIAAGVLFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYKRPKKLNSLDIGGILIETSSDPLIIHDD*