AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0769910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0769910 MtrunA17_Chr5g0422641 94.611 334 18 0 1 334 1 334 0.0 648
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0769910 AT1G29700.2 64.242 330 112 3 6 331 16 343 4.77e-152 431
Msa0769910 AT1G29700.1 64.242 330 112 3 6 331 16 343 4.77e-152 431

Find 92 sgRNAs with CRISPR-Local

Find 527 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGGCAACGTCCTGAAAA+TGG 0.170652 5_2:-39731716 Msa0769910:CDS
TATATTGGTTGATCCAATTT+TGG 0.174681 5_2:-39734258 Msa0769910:CDS
GAAATATTTAAAGAACTTTC+AGG 0.185096 5_2:-39734189 Msa0769910:intron
GTTGCTATAACTCTAATATT+TGG 0.185604 5_2:+39733149 None:intergenic
CCCAAGTTTACATTGGTTTC+AGG 0.186906 5_2:-39731432 Msa0769910:CDS
CTTCTCTTTCTCTAATATTA+TGG 0.192125 5_2:-39726505 Msa0769910:three_prime_UTR
ACTGATCTTTGGTTCAATTT+AGG 0.198021 5_2:-39726846 Msa0769910:exon
TCCAAGTTACCCACCAAAAT+TGG 0.233715 5_2:+39734245 None:intergenic
TCCTAATGCCAAGAGCTTAT+TGG 0.234051 5_2:-39733126 Msa0769910:CDS
GAAACAGTTTCTTCTTCTTA+TGG 0.241215 5_2:+39734651 None:intergenic
CTTCAAACTCACATATTTAG+AGG 0.268843 5_2:-39734413 Msa0769910:intron
TTTCTGAGAAAAGGGGTTTA+GGG 0.278605 5_2:+39733175 None:intergenic
ATTTCTGAGAAAAGGGGTTT+AGG 0.280321 5_2:+39733174 None:intergenic
ATGAGTAAGCAATCAATTTC+AGG 0.284844 5_2:+39733233 None:intergenic
AATACTTGGAGATGAGAAAA+TGG 0.296385 5_2:+39734624 None:intergenic
TTGGTGGGTAACTTGGATTT+TGG 0.315233 5_2:-39734239 Msa0769910:CDS
AATTTCAGCAAACTGATCTT+TGG 0.316782 5_2:-39726857 Msa0769910:exon
TGGTTCTAAGGTCGGGATTA+AGG 0.323414 5_2:-39731765 Msa0769910:CDS
TTTGGAAATTTCTGAGAAAA+GGG 0.340438 5_2:+39733167 None:intergenic
ATTTGGAAATTTCTGAGAAA+AGG 0.375893 5_2:+39733166 None:intergenic
TGAAACAAAGTATGGTTCTA+AGG 0.388130 5_2:-39731777 Msa0769910:CDS
TCCTGAAACCAATGTAAACT+TGG 0.393744 5_2:+39731431 None:intergenic
TCTGAAATTGAAACAAAGTA+TGG 0.394662 5_2:-39731785 Msa0769910:CDS
TCCAATAAGCTCTTGGCATT+AGG 0.399654 5_2:+39733125 None:intergenic
GCTACAGCAGGACCAGTTCT+TGG 0.401867 5_2:-39731743 Msa0769910:CDS
TCAGGTTACATATATAGAAC+CGG 0.415718 5_2:-39731816 Msa0769910:intron
GGCTCTACAACCTTCGCATC+TGG 0.417892 5_2:+39726901 None:intergenic
TGTGGATGGAGTAAATATAT+TGG 0.442782 5_2:-39734273 Msa0769910:CDS
TGAACTGAACAAGATCAGTT+TGG 0.449461 5_2:+39726797 None:intergenic
TTGACAGTTTGTACACCGTT+TGG 0.459660 5_2:+39726707 None:intergenic
TGCCAAGGTGGTCCAAGAAC+TGG 0.462182 5_2:+39731731 None:intergenic
TTTGGATATAGGGAAATAGT+TGG 0.464321 5_2:-39734304 Msa0769910:intron
CTCTAAATATGTGAGTTTGA+AGG 0.465267 5_2:+39734414 None:intergenic
ATACTTGGAGATGAGAAAAT+GGG 0.466628 5_2:+39734625 None:intergenic
GAAATTTCAACTGCTACTCC+TGG 0.475084 5_2:+39726874 None:intergenic
TCAATTTCAGAGCTTTGTCC+CGG 0.476552 5_2:+39731797 None:intergenic
CTTGGCAACGTCCTGAAAAT+GGG 0.478519 5_2:-39731715 Msa0769910:intron
TAATCAAAGCTTCATTGAAA+AGG 0.478940 5_2:-39731499 Msa0769910:CDS
CAAAGTATGGTTCTAAGGTC+GGG 0.481065 5_2:-39731772 Msa0769910:CDS
ATGGAGATCTAGATAGCAAA+GGG 0.486190 5_2:-39730802 Msa0769910:CDS
TGCAAGCATAATTGCGTCAG+AGG 0.490375 5_2:-39730774 Msa0769910:CDS
TGTAATGTAGCCATGGTTGA+TGG 0.493497 5_2:+39734715 None:intergenic
GTTTCTTCTTCTTATGGAGT+GGG 0.497926 5_2:+39734657 None:intergenic
GTTCATAGTAGAGAGACAAT+TGG 0.505320 5_2:+39731535 None:intergenic
GTTTAATACAGTTGAAGTTG+TGG 0.506989 5_2:+39734588 None:intergenic
ACTGATCTTGTTCAGTTCAC+CGG 0.507929 5_2:-39726793 Msa0769910:three_prime_UTR
AAGAGGGTCCAATAAGCTCT+TGG 0.508291 5_2:+39733118 None:intergenic
ACAAAGTATGGTTCTAAGGT+CGG 0.511035 5_2:-39731773 Msa0769910:CDS
AAAGCTTCATTGAAAAGGAA+AGG 0.512699 5_2:-39731494 Msa0769910:CDS
CTTTGTTGACAGGTTTGTTG+TGG 0.514877 5_2:-39730834 Msa0769910:intron
TCCATCATAGAAATAGAAAA+CGG 0.520247 5_2:+39726435 None:intergenic
TATAGGGAAATAGTTGGCTA+TGG 0.520516 5_2:-39734298 Msa0769910:intron
GAAATTGAAGTGCCAATACT+TGG 0.525456 5_2:+39734610 None:intergenic
TTACAATATTGCAGTTCTCT+CGG 0.525800 5_2:-39734697 Msa0769910:CDS
AGGGGTTTAGGGTCTTCAAA+TGG 0.527721 5_2:+39733186 None:intergenic
CTTTAACTATAGACATGGCT+CGG 0.530631 5_2:+39726760 None:intergenic
GGGAACAATAGAATCATTCA+AGG 0.534072 5_2:-39730753 Msa0769910:intron
CAGGTTACATATATAGAACC+GGG 0.541280 5_2:-39731815 Msa0769910:CDS
TCTTCTTCTTATGGAGTGGG+AGG 0.541840 5_2:+39734660 None:intergenic
ATATGCTGAACTAAACCAAA+CGG 0.542485 5_2:-39726722 Msa0769910:three_prime_UTR
AAGCTTCATTGAAAAGGAAA+GGG 0.544883 5_2:-39731493 Msa0769910:CDS
ATCTTTGGTTCAATTTAGGA+AGG 0.544892 5_2:-39726842 Msa0769910:three_prime_UTR
AGTTTCTTCTTCTTATGGAG+TGG 0.545900 5_2:+39734656 None:intergenic
GTTATTGCCCAAGTTTACAT+TGG 0.547513 5_2:-39731439 Msa0769910:CDS
TCAACTGCTACTCCTGGGAT+AGG 0.549422 5_2:+39726880 None:intergenic
TGATGGAGGATATTCATTAG+TGG 0.550210 5_2:-39726419 Msa0769910:three_prime_UTR
GTCGGGATTAAGGCTACAGC+AGG 0.552354 5_2:-39731755 Msa0769910:CDS
ATGGCTCGGAAACATAAAAC+CGG 0.559700 5_2:+39726774 None:intergenic
CAGTTCTTTAACTATAGACA+TGG 0.561239 5_2:+39726755 None:intergenic
TTGGAAATTTCTGAGAAAAG+GGG 0.563832 5_2:+39733168 None:intergenic
TCAAATGGCAATGATCATCA+AGG 0.573455 5_2:+39733201 None:intergenic
AAATTTCAACTGCTACTCCT+GGG 0.574268 5_2:+39726875 None:intergenic
AAGGTTGTAGAGCCTATCCC+AGG 0.579841 5_2:-39726892 Msa0769910:CDS
AAATAGTTGGCTATGGAATG+TGG 0.580878 5_2:-39734291 Msa0769910:CDS
AAAAGAATTACCAGATGCGA+AGG 0.586937 5_2:-39726911 Msa0769910:CDS
GACCAGTTCTTGGACCACCT+TGG 0.590705 5_2:-39731733 Msa0769910:CDS
CCTGAAACCAATGTAAACTT+GGG 0.591271 5_2:+39731432 None:intergenic
AGTTGGCTATGGAATGTGGA+TGG 0.592713 5_2:-39734287 Msa0769910:CDS
TAGAAGCATCATATAACCAA+GGG 0.597074 5_2:+39734213 None:intergenic
AATGGAGATCTAGATAGCAA+AGG 0.598922 5_2:-39730803 Msa0769910:CDS
CATAATATTAGAGAAAGAGA+AGG 0.603567 5_2:+39726506 None:intergenic
TTAGAAGCATCATATAACCA+AGG 0.613794 5_2:+39734212 None:intergenic
ATGTAGCCATGGTTGATGGA+TGG 0.618553 5_2:+39734719 None:intergenic
TTTGAAGGAATCAGTTACAG+TGG 0.619601 5_2:+39734429 None:intergenic
GCAATATTGTAATGTAGCCA+TGG 0.624553 5_2:+39734708 None:intergenic
GACGCAATTATGCTTGCAAG+AGG 0.627426 5_2:+39730779 None:intergenic
AGCCATGGTTGATGGATGGA+TGG 0.628746 5_2:+39734723 None:intergenic
GCAAGCATAATTGCGTCAGA+GGG 0.632506 5_2:-39730773 Msa0769910:CDS
GTACAAACTGTCAAACTGAA+CGG 0.655131 5_2:-39726698 Msa0769910:three_prime_UTR
GTCCATCCATCCATCAACCA+TGG 0.667256 5_2:-39734725 Msa0769910:exon
TACTTGGAGATGAGAAAATG+GGG 0.673434 5_2:+39734626 None:intergenic
CTTTGATTATAGACACAGTG+AGG 0.677549 5_2:+39731513 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAATGATTTTTTGAT+GGG + chr5_2:39726374-39726393 None:intergenic 10.0%
!!! TATGAGTATTATATTTTTAT+TGG - chr5_2:39728858-39728877 Msa0769910:intron 10.0%
!!! ATGAGTATTATATTTTTATT+GGG - chr5_2:39728859-39728878 Msa0769910:intron 10.0%
!!! AAAATGAATTCTTTTTAAAA+AGG + chr5_2:39730210-39730229 None:intergenic 10.0%
!!! TTTTAAAAAGAATTCATTTT+TGG - chr5_2:39730210-39730229 Msa0769910:intron 10.0%
!! TCAAAGTTTAAAAAAAAAAT+CGG + chr5_2:39730863-39730882 None:intergenic 10.0%
!! TTATAAAAATAGGTAAAAAT+GGG - chr5_2:39733971-39733990 Msa0769910:intron 10.0%
!!! CAAAAAAAATGATTTTTTGA+TGG + chr5_2:39726375-39726394 None:intergenic 15.0%
!! TCTATTAAAATTCTAACATT+TGG + chr5_2:39727661-39727680 None:intergenic 15.0%
!!! TTTTTAATGATATAATGATC+TGG - chr5_2:39728330-39728349 Msa0769910:intron 15.0%
!! TATTTGCATATATAAATCTT+GGG - chr5_2:39729956-39729975 Msa0769910:intron 15.0%
!!! TTTCTATGAAATATTACTTT+TGG + chr5_2:39729986-39730005 None:intergenic 15.0%
!! TCATTAATTGTTTCAATTAA+TGG - chr5_2:39730038-39730057 Msa0769910:intron 15.0%
!!! AAAATGAATTCTTTGAAAAA+AGG + chr5_2:39730140-39730159 None:intergenic 15.0%
!!! TTTTTCAAAGAATTCATTTT+TGG - chr5_2:39730140-39730159 Msa0769910:intron 15.0%
!!! AGCATAAAAATTTAATTTCT+TGG - chr5_2:39732851-39732870 Msa0769910:intron 15.0%
!! ATTATTATATTTGTGTGAAA+TGG - chr5_2:39733856-39733875 Msa0769910:intron 15.0%
!! CTTATAAAAATAGGTAAAAA+TGG - chr5_2:39733970-39733989 Msa0769910:intron 15.0%
!!! TTGAATTTTTTTACATATGA+AGG + chr5_2:39734586-39734605 None:intergenic 15.0%
!!! ATTTTGCTTCTAATTATTTG+TGG + chr5_2:39726421-39726440 None:intergenic 20.0%
!!! TTACATTTGTTTTGTTGTTT+TGG - chr5_2:39726893-39726912 Msa0769910:CDS 20.0%
!! GAAATATTTAAAGAACTTTC+AGG - chr5_2:39727026-39727045 Msa0769910:intron 20.0%
!! TTCAATGTAATTATATGTGT+CGG - chr5_2:39727388-39727407 Msa0769910:intron 20.0%
!!! GGATTTTCATTTATAGAATT+TGG - chr5_2:39727634-39727653 Msa0769910:intron 20.0%
!!! TTAAAAATATTTTATGCCTC+AGG - chr5_2:39727718-39727737 Msa0769910:intron 20.0%
!! TACTTACATTAGTAAAAAGA+GGG + chr5_2:39728116-39728135 None:intergenic 20.0%
!! ATACTTACATTAGTAAAAAG+AGG + chr5_2:39728117-39728136 None:intergenic 20.0%
!! ATGTACATTCTTTCTATATT+TGG - chr5_2:39728135-39728154 Msa0769910:intron 20.0%
!! AAGATGACAGAATATATAAT+GGG - chr5_2:39728430-39728449 Msa0769910:intron 20.0%
!!! TTGTTGAATATCTATTTTGA+TGG + chr5_2:39728578-39728597 None:intergenic 20.0%
!!! ATATTTGTTTTGATAGAGAT+AGG + chr5_2:39728669-39728688 None:intergenic 20.0%
!! AAACAAATATTCAATTTCCT+TGG - chr5_2:39728679-39728698 Msa0769910:intron 20.0%
!!! TGATATTTAAAATTGACAAG+TGG + chr5_2:39728902-39728921 None:intergenic 20.0%
!! TAAGCACAACTAAATAATAA+GGG + chr5_2:39729201-39729220 None:intergenic 20.0%
!! ATAAGCACAACTAAATAATA+AGG + chr5_2:39729202-39729221 None:intergenic 20.0%
!!! ACCAAATTTCATATATTTTC+AGG - chr5_2:39729381-39729400 Msa0769910:intron 20.0%
!! ACCTGAAAATATATGAAATT+TGG + chr5_2:39729385-39729404 None:intergenic 20.0%
!!! AGTATTTTGCAATGATTTTT+TGG + chr5_2:39729920-39729939 None:intergenic 20.0%
!! GTATTTGCATATATAAATCT+TGG - chr5_2:39729955-39729974 Msa0769910:intron 20.0%
!!! TTTTGATCCTTTTCTTATAA+AGG - chr5_2:39730296-39730315 Msa0769910:intron 20.0%
!! AAGTTTAAAAAAAAAATCGG+TGG + chr5_2:39730860-39730879 None:intergenic 20.0%
!!! TAAGAAGAAATAATTTGCTT+GGG + chr5_2:39730985-39731004 None:intergenic 20.0%
!!! TTAAGAAGAAATAATTTGCT+TGG + chr5_2:39730986-39731005 None:intergenic 20.0%
!! AAAAGTAAATTATTACCACA+TGG - chr5_2:39732601-39732620 Msa0769910:intron 20.0%
!! AAATGTATCAAAAGTAGAAT+GGG + chr5_2:39732946-39732965 None:intergenic 20.0%
!! AAAATGTATCAAAAGTAGAA+TGG + chr5_2:39732947-39732966 None:intergenic 20.0%
!! AAAAAAAAAAAGTCAAGAGT+TGG - chr5_2:39733052-39733071 Msa0769910:intron 20.0%
!! AAAAAAAAAAGTCAAGAGTT+GGG - chr5_2:39733053-39733072 Msa0769910:intron 20.0%
!!! ATGAAAATCTTGTAATTTTG+AGG + chr5_2:39733266-39733285 None:intergenic 20.0%
!! CAAATCACAAGTAATAAAAT+AGG - chr5_2:39733353-39733372 Msa0769910:intron 20.0%
!! ACAAGTAATAAAATAGGTTT+AGG - chr5_2:39733359-39733378 Msa0769910:intron 20.0%
!! ATCAGGACTTATTTAATTAT+TGG - chr5_2:39734126-39734145 Msa0769910:intron 20.0%
!! ATACAAAAAAGAAAGTTCTA+AGG - chr5_2:39734658-39734677 Msa0769910:CDS 20.0%
!!! TGTTCTTAAACTACTTTTTA+TGG - chr5_2:39734739-39734758 Msa0769910:five_prime_UTR 20.0%
!!! GTTCTTAAACTACTTTTTAT+GGG - chr5_2:39734740-39734759 Msa0769910:five_prime_UTR 20.0%
!!! TGATTGTATTATCCTTTTTA+TGG - chr5_2:39734846-39734865 Msa0769910:five_prime_UTR 20.0%
!!! GATTGTATTATCCTTTTTAT+GGG - chr5_2:39734847-39734866 Msa0769910:five_prime_UTR 20.0%
!!! TGTTTTGTTGTTTTGGATAT+AGG - chr5_2:39726900-39726919 Msa0769910:CDS 25.0%
!!! GTTTTGTTGTTTTGGATATA+GGG - chr5_2:39726901-39726920 Msa0769910:CDS 25.0%
!!! TATATTGGTTGATCCAATTT+TGG - chr5_2:39726957-39726976 Msa0769910:intron 25.0%
! AATCCAAAATCTTAAGACAT+TGG - chr5_2:39727224-39727243 Msa0769910:intron 25.0%
! ATCCAAAATCTTAAGACATT+GGG - chr5_2:39727225-39727244 Msa0769910:intron 25.0%
!!! TTAATGGATTTTGATTGTGT+GGG - chr5_2:39727820-39727839 Msa0769910:intron 25.0%
! ACAAAGAGTTAATCACTATA+CGG + chr5_2:39727889-39727908 None:intergenic 25.0%
! AACTCTTTGTTAAAACTACA+AGG - chr5_2:39727899-39727918 Msa0769910:intron 25.0%
!! TTTGGAAATTTCTGAGAAAA+GGG + chr5_2:39728051-39728070 None:intergenic 25.0%
!! ATTTGGAAATTTCTGAGAAA+AGG + chr5_2:39728052-39728071 None:intergenic 25.0%
! GTTGCTATAACTCTAATATT+TGG + chr5_2:39728069-39728088 None:intergenic 25.0%
! TCTGTAGTATGTATTTGAAT+TGG - chr5_2:39728186-39728205 Msa0769910:intron 25.0%
! GAAGATGACAGAATATATAA+TGG - chr5_2:39728429-39728448 Msa0769910:intron 25.0%
! ACAGAAAATATGAGCTATAT+TGG - chr5_2:39728750-39728769 Msa0769910:intron 25.0%
! CAGAAAATATGAGCTATATT+GGG - chr5_2:39728751-39728770 Msa0769910:intron 25.0%
! AGAAAATATGAGCTATATTG+GGG - chr5_2:39728752-39728771 Msa0769910:intron 25.0%
!! AGATTTTATCAAATGTGCAA+AGG - chr5_2:39728831-39728850 Msa0769910:intron 25.0%
! CACAAAAAACACTATTATTG+TGG + chr5_2:39729048-39729067 None:intergenic 25.0%
!!! AATAGTGTTTTTTGTGCATT+CGG - chr5_2:39729052-39729071 Msa0769910:intron 25.0%
! AACAAAACCAATATGAAGAT+GGG + chr5_2:39729231-39729250 None:intergenic 25.0%
!! TCTGAAATTGAAACAAAGTA+TGG - chr5_2:39729430-39729449 Msa0769910:intron 25.0%
! ATTTGAACGAATAGCAAATA+AGG + chr5_2:39729592-39729611 None:intergenic 25.0%
! TAATCAAAGCTTCATTGAAA+AGG - chr5_2:39729716-39729735 Msa0769910:intron 25.0%
! CAGGTAAACAAAAATTTACT+TGG + chr5_2:39729847-39729866 None:intergenic 25.0%
!! ATTTAAGATCGATTAACCAA+TGG - chr5_2:39730013-39730032 Msa0769910:intron 25.0%
!!! TCATTTTTGGTAATAGTTTG+TGG - chr5_2:39730153-39730172 Msa0769910:intron 25.0%
!! GGTAATTTTCCTAATATTCT+TGG - chr5_2:39730231-39730250 Msa0769910:intron 25.0%
! TCCTAATATTCTTGGTTATT+TGG - chr5_2:39730239-39730258 Msa0769910:intron 25.0%
! TCCAAATAACCAAGAATATT+AGG + chr5_2:39730243-39730262 None:intergenic 25.0%
!! ATTTCAACTAAAGCTCATTT+TGG - chr5_2:39730270-39730289 Msa0769910:intron 25.0%
! CAGAAAACCTTTATAAGAAA+AGG + chr5_2:39730306-39730325 None:intergenic 25.0%
! AGATATACATAAAAGAACTG+TGG + chr5_2:39730348-39730367 None:intergenic 25.0%
!! TGTGTTATGTCTGTTATTTA+TGG - chr5_2:39730521-39730540 Msa0769910:intron 25.0%
!!! TAGTTGGTTTAATTGCTTTT+GGG + chr5_2:39730893-39730912 None:intergenic 25.0%
!!! AAGAAGAAATAATTTGCTTG+GGG + chr5_2:39730984-39731003 None:intergenic 25.0%
! TCTTAAAATTCATGCTCTAT+CGG - chr5_2:39731000-39731019 Msa0769910:intron 25.0%
! TGTTCTTGTTCAAAAAAAGA+TGG - chr5_2:39731029-39731048 Msa0769910:intron 25.0%
! ATGGAATACTTAAATAGCTT+GGG + chr5_2:39732263-39732282 None:intergenic 25.0%
! AATGGAATACTTAAATAGCT+TGG + chr5_2:39732264-39732283 None:intergenic 25.0%
! TTATAGTATAGAATGCTCAA+TGG + chr5_2:39732282-39732301 None:intergenic 25.0%
! AATGCTTCATTTAGTATTTC+CGG - chr5_2:39732384-39732403 Msa0769910:intron 25.0%
!! TTAACTACATAGAAAGCATA+GGG + chr5_2:39732583-39732602 None:intergenic 25.0%
!! TTTAACTACATAGAAAGCAT+AGG + chr5_2:39732584-39732603 None:intergenic 25.0%
! TATTACAGTAAATTACCATG+TGG + chr5_2:39732619-39732638 None:intergenic 25.0%
! TGTAATAGAAACATAGTCTA+GGG - chr5_2:39732632-39732651 Msa0769910:intron 25.0%
! TAATCTTAATCTGTTCAGAA+TGG - chr5_2:39732819-39732838 Msa0769910:intron 25.0%
!! AATTTAATTTCTTGGTGAGT+TGG - chr5_2:39732859-39732878 Msa0769910:intron 25.0%
! AAAAAAAAAGTCAAGAGTTG+GGG - chr5_2:39733054-39733073 Msa0769910:intron 25.0%
!!! TAGTTTTAACACTCTAAAAG+TGG + chr5_2:39733110-39733129 None:intergenic 25.0%
! TATAAAAAGAGCAATGGATA+GGG - chr5_2:39733159-39733178 Msa0769910:CDS 25.0%
! GTTTCAAACTTAGATAACAT+TGG - chr5_2:39733401-39733420 Msa0769910:intron 25.0%
!!! GTAGGAAGTATTCAAATAAA+AGG + chr5_2:39733446-39733465 None:intergenic 25.0%
!! ATAAGGAAAGTATAATTGGT+AGG + chr5_2:39733464-39733483 None:intergenic 25.0%
!! AGGAATAAGGAAAGTATAAT+TGG + chr5_2:39733468-39733487 None:intergenic 25.0%
! TGCCTAAATTAAACTTTGTA+AGG - chr5_2:39733590-39733609 Msa0769910:intron 25.0%
!! AGCCTTACAAAGTTTAATTT+AGG + chr5_2:39733595-39733614 None:intergenic 25.0%
! GATTGAAGCCAAATAATAAA+GGG + chr5_2:39733649-39733668 None:intergenic 25.0%
! TGATTGAAGCCAAATAATAA+AGG + chr5_2:39733650-39733669 None:intergenic 25.0%
! ACATAAATGCTTATGTAATC+AGG - chr5_2:39734109-39734128 Msa0769910:intron 25.0%
! TCTCTTAATTATGATTTGAG+TGG - chr5_2:39734186-39734205 Msa0769910:intron 25.0%
! TAAGTGATTCTATCTTCAAA+TGG - chr5_2:39734258-39734277 Msa0769910:CDS 25.0%
!! TTTTACATATGAAGGTTTGA+TGG + chr5_2:39734578-39734597 None:intergenic 25.0%
! CATAATATTAGAGAAAGAGA+AGG + chr5_2:39734712-39734731 None:intergenic 25.0%
! CTTCTCTTTCTCTAATATTA+TGG - chr5_2:39734710-39734729 Msa0769910:exon 25.0%
! TCCATCATAGAAATAGAAAA+CGG + chr5_2:39734783-39734802 None:intergenic 25.0%
!! TCATTAGTGGAATGATTTTA+AGG - chr5_2:39734809-39734828 Msa0769910:five_prime_UTR 25.0%
TTACAATATTGCAGTTCTCT+CGG - chr5_2:39726518-39726537 Msa0769910:three_prime_UTR 30.0%
GAAACAGTTTCTTCTTCTTA+TGG + chr5_2:39726567-39726586 None:intergenic 30.0%
ATACTTGGAGATGAGAAAAT+GGG + chr5_2:39726593-39726612 None:intergenic 30.0%
AATACTTGGAGATGAGAAAA+TGG + chr5_2:39726594-39726613 None:intergenic 30.0%
! ATTTTCTCATCTCCAAGTAT+TGG - chr5_2:39726593-39726612 Msa0769910:three_prime_UTR 30.0%
GTTTAATACAGTTGAAGTTG+TGG + chr5_2:39726630-39726649 None:intergenic 30.0%
!! CTGTGTTTTATTCTCAGATT+AGG - chr5_2:39726725-39726744 Msa0769910:three_prime_UTR 30.0%
CTCTAAATATGTGAGTTTGA+AGG + chr5_2:39726804-39726823 None:intergenic 30.0%
CTTCAAACTCACATATTTAG+AGG - chr5_2:39726802-39726821 Msa0769910:three_prime_UTR 30.0%
AAACTCACATATTTAGAGGT+TGG - chr5_2:39726806-39726825 Msa0769910:three_prime_UTR 30.0%
! ACATATTTAGAGGTTGGTTA+TGG - chr5_2:39726812-39726831 Msa0769910:three_prime_UTR 30.0%
TTTGGATATAGGGAAATAGT+TGG - chr5_2:39726911-39726930 Msa0769910:CDS 30.0%
TGTGGATGGAGTAAATATAT+TGG - chr5_2:39726942-39726961 Msa0769910:intron 30.0%
!! TAGAAGCATCATATAACCAA+GGG + chr5_2:39727005-39727024 None:intergenic 30.0%
!! TTAGAAGCATCATATAACCA+AGG + chr5_2:39727006-39727025 None:intergenic 30.0%
!!! AGGTATGTTTTGACTTTTGA+TGG - chr5_2:39727046-39727065 Msa0769910:intron 30.0%
TGGATACTATTAGTTCCTTA+TGG - chr5_2:39727066-39727085 Msa0769910:intron 30.0%
! AACCCAATGTCTTAAGATTT+TGG + chr5_2:39727230-39727249 None:intergenic 30.0%
TCTCAAATTATTAGCAGTGT+CGG + chr5_2:39727356-39727375 None:intergenic 30.0%
ACGCTGAATCAAAAATTGAA+AGG - chr5_2:39727549-39727568 Msa0769910:intron 30.0%
! TACAATTTAGTTCATGTGCT+AGG - chr5_2:39727613-39727632 Msa0769910:intron 30.0%
CGGGTTTGAAAGAAAATATA+TGG - chr5_2:39727778-39727797 Msa0769910:intron 30.0%
CAATCAAAATCCATTAACCT+GGG + chr5_2:39727817-39727836 None:intergenic 30.0%
ACAATCAAAATCCATTAACC+TGG + chr5_2:39727818-39727837 None:intergenic 30.0%
!!! GTTAATGGATTTTGATTGTG+TGG - chr5_2:39727819-39727838 Msa0769910:intron 30.0%
CAAAGAGTTAATCACTATAC+GGG + chr5_2:39727888-39727907 None:intergenic 30.0%
ATGAGTAAGCAATCAATTTC+AGG + chr5_2:39727985-39728004 None:intergenic 30.0%
! TTGGAAATTTCTGAGAAAAG+GGG + chr5_2:39728050-39728069 None:intergenic 30.0%
ATTGGAATGATGCAATGATT+TGG - chr5_2:39728204-39728223 Msa0769910:intron 30.0%
!! CAATGATTTGGTTGTGTATT+TGG - chr5_2:39728216-39728235 Msa0769910:intron 30.0%
!! AAGATTGACTGATTTTGAGA+GGG - chr5_2:39728467-39728486 Msa0769910:intron 30.0%
ATATATGACAACTGTGTTGT+TGG + chr5_2:39728646-39728665 None:intergenic 30.0%
TAAAATTCCATGTAGTCTGT+AGG - chr5_2:39728794-39728813 Msa0769910:intron 30.0%
AAATGACAAATATCTGGTCA+TGG + chr5_2:39728930-39728949 None:intergenic 30.0%
CAGTCAAAATGACAAATATC+TGG + chr5_2:39728936-39728955 None:intergenic 30.0%
GAGTTTCACAAAGATAAAAG+TGG - chr5_2:39729000-39729019 Msa0769910:intron 30.0%
AGCATATCAAACATCATTGT+TGG + chr5_2:39729111-39729130 None:intergenic 30.0%
ACAAAACCAATATGAAGATG+GGG + chr5_2:39729230-39729249 None:intergenic 30.0%
CAACAAAACCAATATGAAGA+TGG + chr5_2:39729232-39729251 None:intergenic 30.0%
ATTGCATGCTAAATATTGAC+AGG + chr5_2:39729286-39729305 None:intergenic 30.0%
TCAGGTTACATATATAGAAC+CGG - chr5_2:39729399-39729418 Msa0769910:intron 30.0%
! TGAAACAAAGTATGGTTCTA+AGG - chr5_2:39729438-39729457 Msa0769910:intron 30.0%
AAAGCTTCATTGAAAAGGAA+AGG - chr5_2:39729721-39729740 Msa0769910:intron 30.0%
AAGCTTCATTGAAAAGGAAA+GGG - chr5_2:39729722-39729741 Msa0769910:intron 30.0%
!!! GTGTTTTTGTGTGTTTTTTC+AGG + chr5_2:39729866-39729885 None:intergenic 30.0%
AAAACACTACTCAATGCAAA+TGG - chr5_2:39729879-39729898 Msa0769910:intron 30.0%
TTGCATATATAAATCTTGGG+AGG - chr5_2:39729959-39729978 Msa0769910:intron 30.0%
TGCATATATAAATCTTGGGA+GGG - chr5_2:39729960-39729979 Msa0769910:intron 30.0%
GAAACAATTAATGACTCCAT+TGG + chr5_2:39730032-39730051 None:intergenic 30.0%
! GAATATCATCAACTAGTTTG+TGG - chr5_2:39730083-39730102 Msa0769910:intron 30.0%
! TTTGTTGTGGCAATGAAAAA+TGG - chr5_2:39730394-39730413 Msa0769910:intron 30.0%
AAGCAACTTATCTGCATAAT+TGG + chr5_2:39730499-39730518 None:intergenic 30.0%
AAAGAAAGTGACGTTTCTTA+TGG + chr5_2:39730547-39730566 None:intergenic 30.0%
CAAAAGGTTACGATTACTTA+TGG + chr5_2:39730572-39730591 None:intergenic 30.0%
! CATAAGTAATCGTAACCTTT+TGG - chr5_2:39730570-39730589 Msa0769910:intron 30.0%
TTGATGGAAGAAAGAAAGAA+AGG + chr5_2:39730805-39730824 None:intergenic 30.0%
AAAAAAATCGGTGGAATCAA+AGG + chr5_2:39730851-39730870 None:intergenic 30.0%
!! GTAGTTGGTTTAATTGCTTT+TGG + chr5_2:39730894-39730913 None:intergenic 30.0%
!! AGAAGAAATAATTTGCTTGG+GGG + chr5_2:39730983-39731002 None:intergenic 30.0%
TGAGCATTCTATACTATAAG+TGG - chr5_2:39732283-39732302 Msa0769910:intron 30.0%
GAGCATTCTATACTATAAGT+GGG - chr5_2:39732284-39732303 Msa0769910:intron 30.0%
AAAAAGTGATACCTACGAAA+GGG + chr5_2:39732414-39732433 None:intergenic 30.0%
AATGTTCGTAGACTACTTAA+GGG + chr5_2:39732481-39732500 None:intergenic 30.0%
CTGTAATAGAAACATAGTCT+AGG - chr5_2:39732631-39732650 Msa0769910:intron 30.0%
GTAATAGAAACATAGTCTAG+GGG - chr5_2:39732633-39732652 Msa0769910:intron 30.0%
TAAGACTAGTGAATCTACTT+GGG + chr5_2:39732732-39732751 None:intergenic 30.0%
ATAAGACTAGTGAATCTACT+TGG + chr5_2:39732733-39732752 None:intergenic 30.0%
AACACTGAACTTTGTATTGT+CGG + chr5_2:39732800-39732819 None:intergenic 30.0%
GAAGTGTATAAAAAGAGCAA+TGG - chr5_2:39733153-39733172 Msa0769910:CDS 30.0%
GTATAAAAAGAGCAATGGAT+AGG - chr5_2:39733158-39733177 Msa0769910:CDS 30.0%
! GTGTAAAATGAGATACGTTT+TGG + chr5_2:39733297-39733316 None:intergenic 30.0%
! AAATAGGTTTAGGACATAAG+AGG - chr5_2:39733369-39733388 Msa0769910:intron 30.0%
! AATAGGTTTAGGACATAAGA+GGG - chr5_2:39733370-39733389 Msa0769910:intron 30.0%
ATATGCAAAATGACAGTTGA+AGG + chr5_2:39733687-39733706 None:intergenic 30.0%
!!! TTCAACTGTCATTTTGCATA+TGG - chr5_2:39733686-39733705 Msa0769910:intron 30.0%
! ATTTTTATAAGCTCTCCCAA+AGG + chr5_2:39733961-39733980 None:intergenic 30.0%
TTGGGAGAGCTTATAAAAAT+AGG - chr5_2:39733961-39733980 Msa0769910:intron 30.0%
AATTTCAGCAAACTGATCTT+TGG - chr5_2:39734358-39734377 Msa0769910:intron 30.0%
! ACTGATCTTTGGTTCAATTT+AGG - chr5_2:39734369-39734388 Msa0769910:intron 30.0%
! ATCTTTGGTTCAATTTAGGA+AGG - chr5_2:39734373-39734392 Msa0769910:intron 30.0%
CAGTTCTTTAACTATAGACA+TGG + chr5_2:39734463-39734482 None:intergenic 30.0%
ATATGCTGAACTAAACCAAA+CGG - chr5_2:39734493-39734512 Msa0769910:intron 30.0%
!!! GTTTTCTATTTCTATGATGG+AGG - chr5_2:39734782-39734801 Msa0769910:five_prime_UTR 30.0%
GCAATATTGTAATGTAGCCA+TGG + chr5_2:39726510-39726529 None:intergenic 35.0%
GTTTCTTCTTCTTATGGAGT+GGG + chr5_2:39726561-39726580 None:intergenic 35.0%
AGTTTCTTCTTCTTATGGAG+TGG + chr5_2:39726562-39726581 None:intergenic 35.0%
TACTTGGAGATGAGAAAATG+GGG + chr5_2:39726592-39726611 None:intergenic 35.0%
! GAAATTGAAGTGCCAATACT+TGG + chr5_2:39726608-39726627 None:intergenic 35.0%
TTTGAAGGAATCAGTTACAG+TGG + chr5_2:39726789-39726808 None:intergenic 35.0%
TATAGGGAAATAGTTGGCTA+TGG - chr5_2:39726917-39726936 Msa0769910:CDS 35.0%
AAATAGTTGGCTATGGAATG+TGG - chr5_2:39726924-39726943 Msa0769910:CDS 35.0%
! ATTGGTTGATCCAATTTTGG+TGG - chr5_2:39726960-39726979 Msa0769910:intron 35.0%
!! TTGGTTGATCCAATTTTGGT+GGG - chr5_2:39726961-39726980 Msa0769910:intron 35.0%
! TCCTTATGGATTGTGTCTTT+AGG - chr5_2:39727080-39727099 Msa0769910:intron 35.0%
! CCTTATGGATTGTGTCTTTA+GGG - chr5_2:39727081-39727100 Msa0769910:intron 35.0%
TAATTGCTCTTGGCCTAATT+AGG + chr5_2:39727178-39727197 None:intergenic 35.0%
TAATTAGGCCAAGAGCAATT+AGG - chr5_2:39727177-39727196 Msa0769910:intron 35.0%
ATCTTAAGACATTGGGTTCA+TGG - chr5_2:39727232-39727251 Msa0769910:intron 35.0%
TCTTAAGACATTGGGTTCAT+GGG - chr5_2:39727233-39727252 Msa0769910:intron 35.0%
GACTCTATGAAGCATGTTTA+CGG - chr5_2:39727295-39727314 Msa0769910:intron 35.0%
TATGAAGCAAAAACACTCCT+CGG + chr5_2:39727443-39727462 None:intergenic 35.0%
AAAATCCATTAACCTGGGTT+GGG + chr5_2:39727812-39727831 None:intergenic 35.0%
TCAAATGGCAATGATCATCA+AGG + chr5_2:39728017-39728036 None:intergenic 35.0%
! TTTCTGAGAAAAGGGGTTTA+GGG + chr5_2:39728043-39728062 None:intergenic 35.0%
! ATTTCTGAGAAAAGGGGTTT+AGG + chr5_2:39728044-39728063 None:intergenic 35.0%
ATACAGCTTTCACAACCAAA+CGG + chr5_2:39728165-39728184 None:intergenic 35.0%
!! TCAAAACGAGTTTTTCGACT+TGG + chr5_2:39728262-39728281 None:intergenic 35.0%
ATCCAATCTACCAAGTTTGA+TGG - chr5_2:39728285-39728304 Msa0769910:intron 35.0%
TACCATCAAACTTGGTAGAT+TGG + chr5_2:39728290-39728309 None:intergenic 35.0%
CATGATTTGATTAGTGAGTG+TGG - chr5_2:39728364-39728383 Msa0769910:intron 35.0%
!! GAAGATTGACTGATTTTGAG+AGG - chr5_2:39728466-39728485 Msa0769910:intron 35.0%
! TTGTAACCTTCTCTTTTGGT+AGG - chr5_2:39728542-39728561 Msa0769910:intron 35.0%
AAAGGACAGAGAAAAAACCA+AGG + chr5_2:39728699-39728718 None:intergenic 35.0%
!!! TGGTTTTTTCTCTGTCCTTT+TGG - chr5_2:39728699-39728718 Msa0769910:intron 35.0%
ATATGAGCTATATTGGGGTT+TGG - chr5_2:39728757-39728776 Msa0769910:intron 35.0%
TATGAGCTATATTGGGGTTT+GGG - chr5_2:39728758-39728777 Msa0769910:intron 35.0%
TTTCAAACCTACAGACTACA+TGG + chr5_2:39728804-39728823 None:intergenic 35.0%
TGGAGAAATGTGTGTTCAAA+GGG + chr5_2:39729091-39729110 None:intergenic 35.0%
TTGGAGAAATGTGTGTTCAA+AGG + chr5_2:39729092-39729111 None:intergenic 35.0%
GTGCACTGTTAATGAATCAA+TGG + chr5_2:39729148-39729167 None:intergenic 35.0%
AAAACCAATATGAAGATGGG+GGG + chr5_2:39729228-39729247 None:intergenic 35.0%
CAAAACCAATATGAAGATGG+GGG + chr5_2:39729229-39729248 None:intergenic 35.0%
ATTCAGTATACATGAAGCAC+TGG - chr5_2:39729312-39729331 Msa0769910:intron 35.0%
! TTCAGTATACATGAAGCACT+GGG - chr5_2:39729313-39729332 Msa0769910:intron 35.0%
CAGGTTACATATATAGAACC+GGG - chr5_2:39729400-39729419 Msa0769910:intron 35.0%
!! ACAAAGTATGGTTCTAAGGT+CGG - chr5_2:39729442-39729461 Msa0769910:intron 35.0%
! AACAGAGTTTACCCATTTTC+AGG + chr5_2:39729514-39729533 None:intergenic 35.0%
TGAACGAATAGCAAATAAGG+TGG + chr5_2:39729589-39729608 None:intergenic 35.0%
GTTCATAGTAGAGAGACAAT+TGG + chr5_2:39729683-39729702 None:intergenic 35.0%
CTTTGATTATAGACACAGTG+AGG + chr5_2:39729705-39729724 None:intergenic 35.0%
GTTATTGCCCAAGTTTACAT+TGG - chr5_2:39729776-39729795 Msa0769910:intron 35.0%
CCTGAAACCAATGTAAACTT+GGG + chr5_2:39729786-39729805 None:intergenic 35.0%
TCCTGAAACCAATGTAAACT+TGG + chr5_2:39729787-39729806 None:intergenic 35.0%
ATGCAAATGGTTCATTCCAA+AGG - chr5_2:39729892-39729911 Msa0769910:intron 35.0%
TGCAAATGGTTCATTCCAAA+GGG - chr5_2:39729893-39729912 Msa0769910:intron 35.0%
!!! CAATGATTTTTTGGACCCTT+TGG + chr5_2:39729911-39729930 None:intergenic 35.0%
!! AGTTGATGATATTCGAAGAC+TGG + chr5_2:39730077-39730096 None:intergenic 35.0%
! GGTTCAACTTAAGCTCATTT+TGG - chr5_2:39730104-39730123 Msa0769910:intron 35.0%
! GGTTCAACTTAAGCTCATTT+TGG - chr5_2:39730104-39730123 Msa0769910:intron 35.0%
AATGGAGATCTAGATAGCAA+AGG - chr5_2:39730412-39730431 Msa0769910:intron 35.0%
ATGGAGATCTAGATAGCAAA+GGG - chr5_2:39730413-39730432 Msa0769910:intron 35.0%
GGGAACAATAGAATCATTCA+AGG - chr5_2:39730462-39730481 Msa0769910:intron 35.0%
!! AATCGTAACCTTTTGGCTAT+TGG - chr5_2:39730577-39730596 Msa0769910:intron 35.0%
!! ATCGTAACCTTTTGGCTATT+GGG - chr5_2:39730578-39730597 Msa0769910:intron 35.0%
AGAGCAAAATTCTTCCTATC+AGG + chr5_2:39730619-39730638 None:intergenic 35.0%
AGAAAGAAAGAGTAGAAGGA+CGG + chr5_2:39730828-39730847 None:intergenic 35.0%
AAGGAGAAAGAAAGAGTAGA+AGG + chr5_2:39730832-39730851 None:intergenic 35.0%
AGATGTGATTGCTTTGTAGT+TGG + chr5_2:39730909-39730928 None:intergenic 35.0%
AACGCATATGCATTAACCAA+CGG + chr5_2:39731089-39731108 None:intergenic 35.0%
TGAAGATAGAATGGAAGAGA+TGG + chr5_2:39732181-39732200 None:intergenic 35.0%
CAAGCTAGTTGAAGATAGAA+TGG + chr5_2:39732190-39732209 None:intergenic 35.0%
TAGCTTGATCATAGACACTT+GGG - chr5_2:39732203-39732222 Msa0769910:intron 35.0%
GGTTTGTAAGATTCCTCTAT+AGG - chr5_2:39732224-39732243 Msa0769910:intron 35.0%
TTCTTATCAGGTTCCTATAG+AGG + chr5_2:39732240-39732259 None:intergenic 35.0%
AAATAGCTTGGGTTCTTATC+AGG + chr5_2:39732252-39732271 None:intergenic 35.0%
!! CTAAATGAAGCATTGTAGAG+TGG + chr5_2:39732378-39732397 None:intergenic 35.0%
CAAAAAGTGATACCTACGAA+AGG + chr5_2:39732415-39732434 None:intergenic 35.0%
GAATGTTCGTAGACTACTTA+AGG + chr5_2:39732482-39732501 None:intergenic 35.0%
!! TTAACTTCATGGGAGTACTA+CGG + chr5_2:39732504-39732523 None:intergenic 35.0%
TGAAACGAAGTAGACATTGA+TGG - chr5_2:39732532-39732551 Msa0769910:intron 35.0%
TACCATGTCAATGGTGTAAA+TGG - chr5_2:39732697-39732716 Msa0769910:intron 35.0%
CTTAATCTGTTCAGAATGGT+CGG - chr5_2:39732823-39732842 Msa0769910:intron 35.0%
TGGGAACATATGAGATACAT+GGG + chr5_2:39732927-39732946 None:intergenic 35.0%
ATGGGAACATATGAGATACA+TGG + chr5_2:39732928-39732947 None:intergenic 35.0%
TGTCTGCATTCTATCATCAT+AGG + chr5_2:39733335-39733354 None:intergenic 35.0%
! ATAGGTTTAGGACATAAGAG+GGG - chr5_2:39733371-39733390 Msa0769910:intron 35.0%
AGACATAAAACAGTCACTTG+GGG + chr5_2:39733512-39733531 None:intergenic 35.0%
GAGACATAAAACAGTCACTT+GGG + chr5_2:39733513-39733532 None:intergenic 35.0%
TGTTGTGAGTGAATACTCAT+GGG + chr5_2:39733542-39733561 None:intergenic 35.0%
ATGTTGTGAGTGAATACTCA+TGG + chr5_2:39733543-39733562 None:intergenic 35.0%
! TTGTAAGGCTTTTCTTGCTT+CGG - chr5_2:39733605-39733624 Msa0769910:intron 35.0%
GTCAGTCTCCCTTTATTATT+TGG - chr5_2:39733638-39733657 Msa0769910:intron 35.0%
!!! TGTCATTTTGCATATGGCTA+AGG - chr5_2:39733692-39733711 Msa0769910:intron 35.0%
ACAGATGTAAACAACCTACA+AGG + chr5_2:39733723-39733742 None:intergenic 35.0%
TTGTTTACATCTGTCCTTCA+TGG - chr5_2:39733729-39733748 Msa0769910:intron 35.0%
TGTTTACATCTGTCCTTCAT+GGG - chr5_2:39733730-39733749 Msa0769910:intron 35.0%
TTCATAGCTAAGAATGCATG+AGG + chr5_2:39734079-39734098 None:intergenic 35.0%
! TTTCATTAAGAGAGCGTGTT+TGG + chr5_2:39734161-39734180 None:intergenic 35.0%
AGATAGAATAGAGAGTCAGA+GGG + chr5_2:39734224-39734243 None:intergenic 35.0%
TAGATAGAATAGAGAGTCAG+AGG + chr5_2:39734225-39734244 None:intergenic 35.0%
CTTCAAATGGTTATCAATGC+AGG - chr5_2:39734271-39734290 Msa0769910:CDS 35.0%
AAAAGAATTACCAGATGCGA+AGG - chr5_2:39734304-39734323 Msa0769910:intron 35.0%
AAATTTCAACTGCTACTCCT+GGG + chr5_2:39734343-39734362 None:intergenic 35.0%
TGAACTGAACAAGATCAGTT+TGG + chr5_2:39734421-39734440 None:intergenic 35.0%
CTTTAACTATAGACATGGCT+CGG + chr5_2:39734458-39734477 None:intergenic 35.0%
GTACAAACTGTCAAACTGAA+CGG - chr5_2:39734517-39734536 Msa0769910:intron 35.0%
!!! GCCGTTTTCTATTTCTATGA+TGG - chr5_2:39734779-39734798 Msa0769910:five_prime_UTR 35.0%
TGATGGAGGATATTCATTAG+TGG - chr5_2:39734796-39734815 Msa0769910:five_prime_UTR 35.0%
!! TGGAATGATTTTAAGGAGTG+AGG - chr5_2:39734816-39734835 Msa0769910:five_prime_UTR 35.0%
TGTAATGTAGCCATGGTTGA+TGG + chr5_2:39726503-39726522 None:intergenic 40.0%
! GTGAGAGAAACTTACTGACT+TGG + chr5_2:39726663-39726682 None:intergenic 40.0%
!! TCCAATTTTGGTGGGTAACT+TGG - chr5_2:39726969-39726988 Msa0769910:intron 40.0%
TCCAAGTTACCCACCAAAAT+TGG + chr5_2:39726973-39726992 None:intergenic 40.0%
!! TTGGTGGGTAACTTGGATTT+TGG - chr5_2:39726976-39726995 Msa0769910:intron 40.0%
!!! ACTTGGATTTTGGAATCCCT+TGG - chr5_2:39726986-39727005 Msa0769910:intron 40.0%
CCCTAAAGACACAATCCATA+AGG + chr5_2:39727084-39727103 None:intergenic 40.0%
!! TGTGTCTTTAGGGTTGTTCA+TGG - chr5_2:39727091-39727110 Msa0769910:intron 40.0%
!! GTGTCTTTAGGGTTGTTCAT+GGG - chr5_2:39727092-39727111 Msa0769910:intron 40.0%
TGTTAATCTCATGACCCAAC+CGG - chr5_2:39727119-39727138 Msa0769910:intron 40.0%
CATGGGCTCTATACTAATCA+AGG - chr5_2:39727250-39727269 Msa0769910:intron 40.0%
TGCTTCATAGAGTCTCACAT+TGG + chr5_2:39727289-39727308 None:intergenic 40.0%
ATGAAGCATGTTTACGGACA+CGG - chr5_2:39727301-39727320 Msa0769910:intron 40.0%
!!! GAGGAGTGTTTTTGCTTCAT+AGG - chr5_2:39727442-39727461 Msa0769910:intron 40.0%
TGTTCGAATCAAACCACTTC+CGG + chr5_2:39727512-39727531 None:intergenic 40.0%
CAAAATCCATTAACCTGGGT+TGG + chr5_2:39727813-39727832 None:intergenic 40.0%
AATCACTATACGGGTCTACA+CGG + chr5_2:39727879-39727898 None:intergenic 40.0%
TCCTAATGCCAAGAGCTTAT+TGG - chr5_2:39728089-39728108 Msa0769910:intron 40.0%
TCCAATAAGCTCTTGGCATT+AGG + chr5_2:39728093-39728112 None:intergenic 40.0%
TCTATATTTGGTCCTCCGTT+TGG - chr5_2:39728147-39728166 Msa0769910:intron 40.0%
GCTACATGTACCATCAAACT+TGG + chr5_2:39728298-39728317 None:intergenic 40.0%
! GTTTGATGGTACATGTAGCA+TGG - chr5_2:39728299-39728318 Msa0769910:intron 40.0%
GTGGTGTAACTGAACTATCT+CGG - chr5_2:39728383-39728402 Msa0769910:intron 40.0%
TGGTGTAACTGAACTATCTC+GGG - chr5_2:39728384-39728403 Msa0769910:intron 40.0%
! GTCGTTGTAACCTTCTCTTT+TGG - chr5_2:39728538-39728557 Msa0769910:intron 40.0%
GACTGTAGAACTTGACCAAA+AGG + chr5_2:39728717-39728736 None:intergenic 40.0%
ATGTGTGTTCAAAGGGTGAA+AGG + chr5_2:39729084-39729103 None:intergenic 40.0%
! TTTTCCCCCCATCTTCATAT+TGG - chr5_2:39729221-39729240 Msa0769910:intron 40.0%
! TCAATTTCAGAGCTTTGTCC+CGG + chr5_2:39729421-39729440 None:intergenic 40.0%
!! CAAAGTATGGTTCTAAGGTC+GGG - chr5_2:39729443-39729462 Msa0769910:intron 40.0%
! GGCAATAACTGTTTTACGAC+TGG + chr5_2:39729765-39729784 None:intergenic 40.0%
!! CCCAAGTTTACATTGGTTTC+AGG - chr5_2:39729783-39729802 Msa0769910:intron 40.0%
ATCGTGATTCCTTTGTTGAC+AGG - chr5_2:39730371-39730390 Msa0769910:intron 40.0%
CACAACAAACCTGTCAACAA+AGG + chr5_2:39730383-39730402 None:intergenic 40.0%
!! CTTTGTTGACAGGTTTGTTG+TGG - chr5_2:39730381-39730400 Msa0769910:intron 40.0%
CTATCAGGTGCTCGTATATA+GGG + chr5_2:39730604-39730623 None:intergenic 40.0%
AGAAAGAAAGGCTGAAAAGC+TGG + chr5_2:39730793-39730812 None:intergenic 40.0%
ACGCATATGCATTAACCAAC+GGG + chr5_2:39731088-39731107 None:intergenic 40.0%
TATGCGTTAGTTAACTCACG+CGG - chr5_2:39731101-39731120 Msa0769910:intron 40.0%
GTCTTGGAAGTCATTCACAA+AGG + chr5_2:39731216-39731235 None:intergenic 40.0%
!! AACAGCTTGTTGTTATGGGA+GGG + chr5_2:39731244-39731263 None:intergenic 40.0%
!! CACCAACAGCTTGTTGTTAT+GGG + chr5_2:39731248-39731267 None:intergenic 40.0%
!! TCACCAACAGCTTGTTGTTA+TGG + chr5_2:39731249-39731268 None:intergenic 40.0%
!!! CAAGCTGTTGGTGATTTTAG+TGG - chr5_2:39731255-39731274 Msa0769910:intron 40.0%
AAGAGATGGAAAGCTAAGTG+CGG + chr5_2:39732167-39732186 None:intergenic 40.0%
CTAGCTTGATCATAGACACT+TGG - chr5_2:39732202-39732221 Msa0769910:intron 40.0%
!! AATGAAGCATTGTAGAGTGG+AGG + chr5_2:39732375-39732394 None:intergenic 40.0%
!!! CTTTTTGAGATACCGACAAC+CGG - chr5_2:39732428-39732447 Msa0769910:intron 40.0%
TCGTAGACTACTTAAGGGAA+TGG + chr5_2:39732476-39732495 None:intergenic 40.0%
!! CACTGTGGCTTTAACTTCAT+GGG + chr5_2:39732514-39732533 None:intergenic 40.0%
!! TCACTGTGGCTTTAACTTCA+TGG + chr5_2:39732515-39732534 None:intergenic 40.0%
ATGTCTACTTCGTTTCACTG+TGG + chr5_2:39732529-39732548 None:intergenic 40.0%
!! GTTTTGTTGAACCTCAGACA+TGG - chr5_2:39732672-39732691 Msa0769910:intron 40.0%
TGAATCTACTTGGGAGAACA+TGG + chr5_2:39732723-39732742 None:intergenic 40.0%
TATTCATGACACTCCTTGTG+CGG - chr5_2:39732979-39732998 Msa0769910:intron 40.0%
! CATTTTTGCCAACAAGGTCA+GGG + chr5_2:39733080-39733099 None:intergenic 40.0%
! ACATTTTTGCCAACAAGGTC+AGG + chr5_2:39733081-39733100 None:intergenic 40.0%
ACCTTGTTGGCAAAAATGTG+AGG - chr5_2:39733082-39733101 Msa0769910:intron 40.0%
! TCCTCACATTTTTGCCAACA+AGG + chr5_2:39733086-39733105 None:intergenic 40.0%
! TAGAGTGTTAAAACTAGCCG+TGG - chr5_2:39733114-39733133 Msa0769910:CDS 40.0%
! AGAGTGTTAAAACTAGCCGT+GGG - chr5_2:39733115-39733134 Msa0769910:CDS 40.0%
GAGCAAAATCTACACGACAT+TGG + chr5_2:39733203-39733222 None:intergenic 40.0%
GGGATGTATGTGAAGGAATA+AGG + chr5_2:39733481-39733500 None:intergenic 40.0%
ACAATCAGGGATGTATGTGA+AGG + chr5_2:39733488-39733507 None:intergenic 40.0%
CGAGACATAAAACAGTCACT+TGG + chr5_2:39733514-39733533 None:intergenic 40.0%
GAGTATTCACTCACAACATC+TGG - chr5_2:39733544-39733563 Msa0769910:intron 40.0%
CGTAAGTATATCTCCCATGA+AGG + chr5_2:39733746-39733765 None:intergenic 40.0%
TCTTCTGTCAACAAGTTCTG+TGG - chr5_2:39733771-39733790 Msa0769910:intron 40.0%
CATTGTACATGAGAGACACT+AGG + chr5_2:39733887-39733906 None:intergenic 40.0%
GAAATTTCAACTGCTACTCC+TGG + chr5_2:39734344-39734363 None:intergenic 40.0%
ACTGATCTTGTTCAGTTCAC+CGG - chr5_2:39734422-39734441 Msa0769910:CDS 40.0%
! ATGGCTCGGAAACATAAAAC+CGG + chr5_2:39734444-39734463 None:intergenic 40.0%
TTGACAGTTTGTACACCGTT+TGG + chr5_2:39734511-39734530 None:intergenic 40.0%
!! ATGTAGCCATGGTTGATGGA+TGG + chr5_2:39726499-39726518 None:intergenic 45.0%
TCTTCTTCTTATGGAGTGGG+AGG + chr5_2:39726558-39726577 None:intergenic 45.0%
AGTTGGCTATGGAATGTGGA+TGG - chr5_2:39726928-39726947 Msa0769910:intron 45.0%
GTTAATCTCATGACCCAACC+GGG - chr5_2:39727120-39727139 Msa0769910:intron 45.0%
CTCACTTGCCTAATTGCTCT+TGG + chr5_2:39727188-39727207 None:intergenic 45.0%
GTCAGTATCTATGTCGTGTC+TGG + chr5_2:39727330-39727349 None:intergenic 45.0%
!! TATATGTGTCGGTGTCGTGT+TGG - chr5_2:39727399-39727418 Msa0769910:intron 45.0%
GCAAAAACACTCCTCGGATA+AGG + chr5_2:39727437-39727456 None:intergenic 45.0%
! TCGATGTTGCAGAAGTGTGA+GGG + chr5_2:39727483-39727502 None:intergenic 45.0%
TCTGCAACATCGAGTCAAAC+CGG - chr5_2:39727490-39727509 Msa0769910:intron 45.0%
! ATGGATTTTTCACCCAACCC+AGG - chr5_2:39727797-39727816 Msa0769910:intron 45.0%
TTTCACCCAACCCAGGTTAA+TGG - chr5_2:39727804-39727823 Msa0769910:intron 45.0%
! AGGGGTTTAGGGTCTTCAAA+TGG + chr5_2:39728032-39728051 None:intergenic 45.0%
AAGAGGGTCCAATAAGCTCT+TGG + chr5_2:39728100-39728119 None:intergenic 45.0%
ACTATCTCGGGTGCTTAGTA+AGG - chr5_2:39728396-39728415 Msa0769910:intron 45.0%
AGAGGGCGATCAGTAAAAAC+AGG - chr5_2:39728484-39728503 Msa0769910:intron 45.0%
GAGGGCGATCAGTAAAAACA+GGG - chr5_2:39728485-39728504 Msa0769910:intron 45.0%
CACTGTCCTACCAAAAGAGA+AGG + chr5_2:39728551-39728570 None:intergenic 45.0%
!! TGAGCCTTATTCCACGAAGT+AGG - chr5_2:39728605-39728624 Msa0769910:intron 45.0%
!! GAGCCTTATTCCACGAAGTA+GGG - chr5_2:39728606-39728625 Msa0769910:intron 45.0%
TGACCCTACTTCGTGGAATA+AGG + chr5_2:39728612-39728631 None:intergenic 45.0%
!! TGGTTCTAAGGTCGGGATTA+AGG - chr5_2:39729450-39729469 Msa0769910:intron 45.0%
CTTGGCAACGTCCTGAAAAT+GGG - chr5_2:39729500-39729519 Msa0769910:intron 45.0%
GACGCAATTATGCTTGCAAG+AGG + chr5_2:39730439-39730458 None:intergenic 45.0%
TGCAAGCATAATTGCGTCAG+AGG - chr5_2:39730441-39730460 Msa0769910:intron 45.0%
GCAAGCATAATTGCGTCAGA+GGG - chr5_2:39730442-39730461 Msa0769910:intron 45.0%
TATAGGGCCCAATAGCCAAA+AGG + chr5_2:39730588-39730607 None:intergenic 45.0%
CCTATCAGGTGCTCGTATAT+AGG + chr5_2:39730605-39730624 None:intergenic 45.0%
CCTATATACGAGCACCTGAT+AGG - chr5_2:39730602-39730621 Msa0769910:intron 45.0%
! AACATGCGCAAGGGCAATTT+TGG + chr5_2:39730678-39730697 None:intergenic 45.0%
TATGCGTGACTTAAGTAGCG+CGG - chr5_2:39730737-39730756 Msa0769910:intron 45.0%
AAGAGTAGAAGGACGGTTGA+TGG + chr5_2:39730821-39730840 None:intergenic 45.0%
!! CAACAGCTTGTTGTTATGGG+AGG + chr5_2:39731245-39731264 None:intergenic 45.0%
CTCCCATAACAACAAGCTGT+TGG - chr5_2:39731243-39731262 Msa0769910:intron 45.0%
! TTAGCACCTCATAGTACCGA+AGG - chr5_2:39732309-39732328 Msa0769910:intron 45.0%
TCAGGGACAGTGTCAATGTA+GGG + chr5_2:39732335-39732354 None:intergenic 45.0%
! TTTCATGAAGTCGGCTCTCA+GGG + chr5_2:39732352-39732371 None:intergenic 45.0%
GAGTGGAGGTTTCATGAAGT+CGG + chr5_2:39732361-39732380 None:intergenic 45.0%
CTGATCAAATGGTTCAGAGC+CGG + chr5_2:39732450-39732469 None:intergenic 45.0%
GGGAATGGATGCTGATCAAA+TGG + chr5_2:39732461-39732480 None:intergenic 45.0%
CTGAGGTTCAACAAAACCTC+AGG + chr5_2:39732669-39732688 None:intergenic 45.0%
! GACATGGAGTACCATGTCAA+TGG - chr5_2:39732688-39732707 Msa0769910:intron 45.0%
GGCCATTTACACCATTGACA+TGG + chr5_2:39732702-39732721 None:intergenic 45.0%
! CAGAGTTTGGCTTACGAGTA+AGG + chr5_2:39732894-39732913 None:intergenic 45.0%
CTTACTCGTAAGCCAAACTC+TGG - chr5_2:39732892-39732911 Msa0769910:intron 45.0%
CTCTCTCTTTCTTTGACCCA+CGG + chr5_2:39733134-39733153 None:intergenic 45.0%
AGTCACTTGGGGAACAATCA+GGG + chr5_2:39733501-39733520 None:intergenic 45.0%
GCAAAATGACAGTTGAAGGC+TGG + chr5_2:39733683-39733702 None:intergenic 45.0%
TGGCTAAGGACATTCCTTGT+AGG - chr5_2:39733706-39733725 Msa0769910:intron 45.0%
TTAGCAACTTTGCACGCCTT+TGG - chr5_2:39733942-39733961 Msa0769910:intron 45.0%
TAGCAACTTTGCACGCCTTT+GGG - chr5_2:39733943-39733962 Msa0769910:intron 45.0%
!! AAATTGAAAAATAAAAAAAA+TGG + chr5_2:39727692-39727711 None:intergenic 5.0%
!! TATATATATATATATATCTT+AGG - chr5_2:39732119-39732138 Msa0769910:intron 5.0%
!! TATATAATTTATATATTCAT+TGG - chr5_2:39733018-39733037 Msa0769910:intron 5.0%
GTCCATCCATCCATCAACCA+TGG - chr5_2:39726490-39726509 Msa0769910:three_prime_UTR 50.0%
!! AGCCATGGTTGATGGATGGA+TGG + chr5_2:39726495-39726514 None:intergenic 50.0%
CCTAATTAGGATGATCCCCC+AGG + chr5_2:39727165-39727184 None:intergenic 50.0%
CCTGGGGGATCATCCTAATT+AGG - chr5_2:39727162-39727181 Msa0769910:intron 50.0%
! CGATGTTGCAGAAGTGTGAG+GGG + chr5_2:39727482-39727501 None:intergenic 50.0%
! CTCGATGTTGCAGAAGTGTG+AGG + chr5_2:39727484-39727503 None:intergenic 50.0%
ACATCGAGTCAAACCGGAAG+TGG - chr5_2:39727496-39727515 Msa0769910:intron 50.0%
!! ATCGCCAGGTTGGGTTGATT+CGG - chr5_2:39727758-39727777 Msa0769910:intron 50.0%
AAACCCGAATCAACCCAACC+TGG + chr5_2:39727765-39727784 None:intergenic 50.0%
TATACGGGTCTACACGGAAC+GGG + chr5_2:39727873-39727892 None:intergenic 50.0%
CTATACGGGTCTACACGGAA+CGG + chr5_2:39727874-39727893 None:intergenic 50.0%
CAGCTTTCACAACCAAACGG+AGG + chr5_2:39728162-39728181 None:intergenic 50.0%
ATGTAGCTGACCCTACTTCG+TGG + chr5_2:39728619-39728638 None:intergenic 50.0%
ACGAAGTAGGGTCAGCTACA+TGG - chr5_2:39728618-39728637 Msa0769910:intron 50.0%
!! TTTTCAGGACGTTGCCAAGG+TGG + chr5_2:39729499-39729518 None:intergenic 50.0%
!! CCATTTTCAGGACGTTGCCA+AGG + chr5_2:39729502-39729521 None:intergenic 50.0%
CCTTGGCAACGTCCTGAAAA+TGG - chr5_2:39729499-39729518 Msa0769910:intron 50.0%
! TTTTGCGCTGCATGTGTTGC+AGG - chr5_2:39729634-39729653 Msa0769910:intron 50.0%
!! GCAATTTTGGCATGGCTGCA+GGG + chr5_2:39730665-39730684 None:intergenic 50.0%
GCGTGACTTAACATGCGCAA+GGG + chr5_2:39730687-39730706 None:intergenic 50.0%
TGCGTGACTTAACATGCGCA+AGG + chr5_2:39730688-39730707 None:intergenic 50.0%
TTGCTTGGGGGAGAACGAAA+GGG + chr5_2:39730971-39730990 None:intergenic 50.0%
TTTGCTTGGGGGAGAACGAA+AGG + chr5_2:39730972-39730991 None:intergenic 50.0%
! GTATTTTCGTCGTGGCTGCA+GGG - chr5_2:39731145-39731164 Msa0769910:intron 50.0%
GGGCAGAGCAGAAATCTGAT+AGG - chr5_2:39731187-39731206 Msa0769910:intron 50.0%
TTATGGGAGGGCAAGTGTCT+TGG + chr5_2:39731232-39731251 None:intergenic 50.0%
CAGTGTCAATGTAGGGCCTT+CGG + chr5_2:39732328-39732347 None:intergenic 50.0%
CTCAGGGACAGTGTCAATGT+AGG + chr5_2:39732336-39732355 None:intergenic 50.0%
! GTTTCATGAAGTCGGCTCTC+AGG + chr5_2:39732353-39732372 None:intergenic 50.0%
ATACCTACGAAAGGGCTGAC+CGG + chr5_2:39732406-39732425 None:intergenic 50.0%
AATGGTTCAGAGCCGGTTGT+CGG + chr5_2:39732443-39732462 None:intergenic 50.0%
TAGGGGAAATGACACTCCTG+AGG - chr5_2:39732650-39732669 Msa0769910:intron 50.0%
GACATGGTACTCCATGTCTG+AGG + chr5_2:39732686-39732705 None:intergenic 50.0%
GGGATTCTGACACCAGAGTT+TGG + chr5_2:39732907-39732926 None:intergenic 50.0%
AAAAGACTGCTCACCGCACA+AGG + chr5_2:39732995-39733014 None:intergenic 50.0%
CAGTCACTTGGGGAACAATC+AGG + chr5_2:39733502-39733521 None:intergenic 50.0%
AAGGTTGTAGAGCCTATCCC+AGG - chr5_2:39734323-39734342 Msa0769910:intron 50.0%
TCAACTGCTACTCCTGGGAT+AGG + chr5_2:39734338-39734357 None:intergenic 50.0%
TCATGACCCAACCGGGTGTT+GGG - chr5_2:39727127-39727146 Msa0769910:intron 55.0%
TCATGACCCAACACCCGGTT+GGG + chr5_2:39727136-39727155 None:intergenic 55.0%
!! AACCGGGTGTTGGGTCATGA+GGG - chr5_2:39727136-39727155 Msa0769910:intron 55.0%
ATGGCACAAGTCGAGTCCTG+AGG + chr5_2:39727737-39727756 None:intergenic 55.0%
TTGTGCCATCATCGCCAGGT+TGG - chr5_2:39727748-39727767 Msa0769910:intron 55.0%
TGTGCCATCATCGCCAGGTT+GGG - chr5_2:39727749-39727768 Msa0769910:intron 55.0%
TCAACCCAACCTGGCGATGA+TGG + chr5_2:39727756-39727775 None:intergenic 55.0%
!! TCGCCAGGTTGGGTTGATTC+GGG - chr5_2:39727759-39727778 Msa0769910:intron 55.0%
GCGTCTGGCCAAAATTGACC+CGG - chr5_2:39727847-39727866 Msa0769910:intron 55.0%
GTCGGGATTAAGGCTACAGC+AGG - chr5_2:39729460-39729479 Msa0769910:intron 55.0%
GCTACAGCAGGACCAGTTCT+TGG - chr5_2:39729472-39729491 Msa0769910:intron 55.0%
GACCAGTTCTTGGACCACCT+TGG - chr5_2:39729482-39729501 Msa0769910:intron 55.0%
TGCCAAGGTGGTCCAAGAAC+TGG + chr5_2:39729487-39729506 None:intergenic 55.0%
!! GGCAATTTTGGCATGGCTGC+AGG + chr5_2:39730666-39730685 None:intergenic 55.0%
!! GCGCAAGGGCAATTTTGGCA+TGG + chr5_2:39730673-39730692 None:intergenic 55.0%
TGCTTGGGGGAGAACGAAAG+GGG + chr5_2:39730970-39730989 None:intergenic 55.0%
GAGCGTGACTTAAGTCCCGT+TGG - chr5_2:39731070-39731089 Msa0769910:intron 55.0%
GGCGTGAGTTAACTCACGCA+GGG - chr5_2:39730758-39730777 Msa0769910:CDS 55.0%
GCGTGAGTTAACTCACGCAG+GGG - chr5_2:39731123-39731142 Msa0769910:intron 55.0%
!!! ACGCAGGGGTATTTTCGTCG+TGG - chr5_2:39731137-39731156 Msa0769910:intron 55.0%
! GGTATTTTCGTCGTGGCTGC+AGG - chr5_2:39731144-39731163 Msa0769910:intron 55.0%
GTAGGGCCTTCGGTACTATG+AGG + chr5_2:39732318-39732337 None:intergenic 55.0%
TTTCCGGTCAGCCCTTTCGT+AGG - chr5_2:39732400-39732419 Msa0769910:intron 55.0%
GGCTCTACAACCTTCGCATC+TGG + chr5_2:39734317-39734336 None:intergenic 55.0%
CTCATGACCCAACCGGGTGT+TGG - chr5_2:39727126-39727145 Msa0769910:intron 60.0%
CTCATGACCCAACACCCGGT+TGG + chr5_2:39727137-39727156 None:intergenic 60.0%
!! CAACCGGGTGTTGGGTCATG+AGG - chr5_2:39727135-39727154 Msa0769910:intron 60.0%
!! ACCGGGTGTTGGGTCATGAG+GGG - chr5_2:39727137-39727156 Msa0769910:intron 60.0%
TCCCCTCATGACCCAACACC+CGG + chr5_2:39727141-39727160 None:intergenic 60.0%
TTGGGTCATGAGGGGAGCCT+GGG - chr5_2:39727145-39727164 Msa0769910:intron 60.0%
TCCTCGGATAAGGCGTGTCC+AGG + chr5_2:39727427-39727446 None:intergenic 60.0%
CGACTTGTGCCATCATCGCC+AGG - chr5_2:39727744-39727763 Msa0769910:intron 60.0%
GATTGTGTGGGCAACGCGTC+TGG - chr5_2:39727832-39727851 Msa0769910:intron 60.0%
! GGAACGGGCCGGGTCAATTT+TGG + chr5_2:39727858-39727877 None:intergenic 60.0%
CGCGAGCAAAATGTGCTGGG+TGG + chr5_2:39730642-39730661 None:intergenic 60.0%
GGGCGCGAGCAAAATGTGCT+GGG + chr5_2:39730645-39730664 None:intergenic 60.0%
AGGGCGCGAGCAAAATGTGC+TGG + chr5_2:39730646-39730665 None:intergenic 60.0%
CGGCGTGAGTTAACTCACGC+AGG - chr5_2:39730757-39730776 Msa0769910:CDS 60.0%
! AGGGCGCGAGCAAAAAGTGC+AGG - chr5_2:39731164-39731183 Msa0769910:intron 60.0%
! GGGCGCGAGCAAAAAGTGCA+GGG - chr5_2:39731165-39731184 Msa0769910:intron 60.0%
! GGCGCGAGCAAAAAGTGCAG+GGG - chr5_2:39731166-39731185 Msa0769910:intron 60.0%
! GCGCGAGCAAAAAGTGCAGG+GGG - chr5_2:39731167-39731186 Msa0769910:intron 60.0%
AGTTGGGGCCCTGACCTTGT+TGG - chr5_2:39733069-39733088 Msa0769910:intron 60.0%
GTTGGGTCATGAGGGGAGCC+TGG - chr5_2:39727144-39727163 Msa0769910:intron 65.0%
TGGGTCATGAGGGGAGCCTG+GGG - chr5_2:39727146-39727165 Msa0769910:intron 65.0%
!! GTCGGTGTCGTGTTGGTGCC+TGG - chr5_2:39727406-39727425 Msa0769910:intron 65.0%
GCCTGGACACGCCTTATCCG+AGG - chr5_2:39727423-39727442 Msa0769910:intron 65.0%
GGGTCATGAGGGGAGCCTGG+GGG - chr5_2:39727147-39727166 Msa0769910:intron 70.0%
GGGTCTACACGGAACGGGCC+GGG + chr5_2:39727868-39727887 None:intergenic 70.0%
CGGGTCTACACGGAACGGGC+CGG + chr5_2:39727869-39727888 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 39726358 39734879 39726358 ID=Msa0769910;Name=Msa0769910
chr5_2 mRNA 39726358 39734879 39726358 ID=Msa0769910-mRNA-1;Parent=Msa0769910;Name=Msa0769910-mRNA-1;_AED=0.08;_eAED=0.08;_QI=151|1|1|1|1|1|8|506|334
chr5_2 exon 39726358 39726944 39726358 ID=Msa0769910-mRNA-1:exon:12695;Parent=Msa0769910-mRNA-1
chr5_2 exon 39730754 39730844 39730754 ID=Msa0769910-mRNA-1:exon:12694;Parent=Msa0769910-mRNA-1
chr5_2 exon 39731390 39731581 39731390 ID=Msa0769910-mRNA-1:exon:12693;Parent=Msa0769910-mRNA-1
chr5_2 exon 39731716 39731834 39731716 ID=Msa0769910-mRNA-1:exon:12692;Parent=Msa0769910-mRNA-1
chr5_2 exon 39733109 39733267 39733109 ID=Msa0769910-mRNA-1:exon:12691;Parent=Msa0769910-mRNA-1
chr5_2 exon 39734190 39734315 39734190 ID=Msa0769910-mRNA-1:exon:12690;Parent=Msa0769910-mRNA-1
chr5_2 exon 39734414 39734495 39734414 ID=Msa0769910-mRNA-1:exon:12689;Parent=Msa0769910-mRNA-1
chr5_2 exon 39734574 39734879 39734574 ID=Msa0769910-mRNA-1:exon:12688;Parent=Msa0769910-mRNA-1
chr5_2 five_prime_UTR 39734729 39734879 39734729 ID=Msa0769910-mRNA-1:five_prime_utr;Parent=Msa0769910-mRNA-1
chr5_2 CDS 39734574 39734728 39734574 ID=Msa0769910-mRNA-1:cds;Parent=Msa0769910-mRNA-1
chr5_2 CDS 39734414 39734495 39734414 ID=Msa0769910-mRNA-1:cds;Parent=Msa0769910-mRNA-1
chr5_2 CDS 39734190 39734315 39734190 ID=Msa0769910-mRNA-1:cds;Parent=Msa0769910-mRNA-1
chr5_2 CDS 39733109 39733267 39733109 ID=Msa0769910-mRNA-1:cds;Parent=Msa0769910-mRNA-1
chr5_2 CDS 39731716 39731834 39731716 ID=Msa0769910-mRNA-1:cds;Parent=Msa0769910-mRNA-1
chr5_2 CDS 39731390 39731581 39731390 ID=Msa0769910-mRNA-1:cds;Parent=Msa0769910-mRNA-1
chr5_2 CDS 39730754 39730844 39730754 ID=Msa0769910-mRNA-1:cds;Parent=Msa0769910-mRNA-1
chr5_2 CDS 39726864 39726944 39726864 ID=Msa0769910-mRNA-1:cds;Parent=Msa0769910-mRNA-1
chr5_2 three_prime_UTR 39726358 39726863 39726358 ID=Msa0769910-mRNA-1:three_prime_utr;Parent=Msa0769910-mRNA-1
Gene Sequence

>Msa0769910

ATGGCTACATTACAATATTGCAGTTCTCTCGGTTTTCTCAACAAAACCTCCCACTCCATAAGAAGAAGAAACTGTTTCAACCCCATTTTCTCATCTCCAAGTATTGGCACTTCAATTTCCACAACTTCAACTGTATTAAACACTAAAATTTCCAAATTAGGTTGTACTGTTTCTGCTGACAACGCTGTTGTGTCGAATTCCACTGTAACTGATTCCTTCAAACTCACATATTTAGAGGGAAATAGTTGGCTATGGAATGTGGATGGAGTAAATATATTGGTTGATCCAATTTTGGTGGGTAACTTGGATTTTGGAATCCCTTGGTTATATGATGCTTCTAAGAAATATTTAAAGAACTTTCAGCTCAGTGATCTTCCTGAAATTGATTGCTTACTCATTACTCAAAGCCTTGATGATCATTGCCATTTGAAGACCCTAAACCCCTTTTCTCAGAAATTTCCAAATATTAGAGTTATAGCAACTCCTAATGCCAAGAGCTTATTGGACCCTCTTTTTACTAATGTTACATATATAGAACCGGGACAAAGCTCTGAAATTGAAACAAAGTATGGTTCTAAGGTCGGGATTAAGGCTACAGCAGGACCAGTTCTTGGACCACCTTGGCAACGTCCTGAAAATGGGTATCTTGTTACGTCTTCGCAAGTCCAATTGTCTCTCTACTATGAACCTCACTGTGTCTATAATCAAAGCTTCATTGAAAAGGAAAGGGCAGATATTGTGATCACACCAGTCGTAAAACAGTTATTGCCCAAGTTTACATTGGTTTCAGGACAAGAAGATGCAGTAAAACTTGCAAAGCTGCTGCAAGCCAAGTTTGTTGTGGCAATGAAAAATGGAGATCTAGATAGCAAAGGGCCTCTTGCAAGCATAATTGCGTCAGAGGGAACAATAGAATCATTCAAGGAGCTTTTATCAAAAGAATTACCAGATGCGAAGGTTGTAGAGCCTATCCCAGGAGTAGCAGTTGAAATTTCAGCAAACTGA

Protein sequence

>Msa0769910

MATLQYCSSLGFLNKTSHSIRRRNCFNPIFSSPSIGTSISTTSTVLNTKISKLGCTVSADNAVVSNSTVTDSFKLTYLEGNSWLWNVDGVNILVDPILVGNLDFGIPWLYDASKKYLKNFQLSDLPEIDCLLITQSLDDHCHLKTLNPFSQKFPNIRVIATPNAKSLLDPLFTNVTYIEPGQSSEIETKYGSKVGIKATAGPVLGPPWQRPENGYLVTSSQVQLSLYYEPHCVYNQSFIEKERADIVITPVVKQLLPKFTLVSGQEDAVKLAKLLQAKFVVAMKNGDLDSKGPLASIIASEGTIESFKELLSKELPDAKVVEPIPGVAVEISAN*