AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0701090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0701090 MtrunA17_Chr8g0379001 98.172 383 6 1 1 382 69 451 0.0 779
Msa0701090 MtrunA17_Chr2g0283771 78.272 382 78 3 1 381 62 439 0.0 598
Msa0701090 MtrunA17_Chr3g0140681 43.258 356 187 5 17 370 56 398 1.34e-94 288
Msa0701090 MtrunA17_Chr4g0072801 44.290 359 170 6 20 369 72 409 5.92e-94 287
Msa0701090 MtrunA17_Chr0c06g0493481 42.257 381 174 8 6 369 65 416 2.01e-92 283
Msa0701090 MtrunA17_Chr1g0170451 42.939 347 172 4 21 367 30 350 1.28e-90 276
Msa0701090 MtrunA17_Chr7g0214251 51.765 85 40 1 89 172 42 126 5.12e-20 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0701090 AT1G29120.8 72.656 384 96 3 1 382 80 456 0.0 545
Msa0701090 AT1G29120.1 72.656 384 96 3 1 382 79 455 0.0 544
Msa0701090 AT1G29120.2 72.656 384 96 3 1 382 79 455 0.0 544
Msa0701090 AT1G29120.5 72.208 385 97 4 1 382 79 456 0.0 536
Msa0701090 AT1G29120.7 72.829 357 88 3 1 355 79 428 2.17e-178 503
Msa0701090 AT1G29120.4 72.871 317 77 3 1 315 79 388 1.31e-152 436
Msa0701090 AT1G29120.3 72.871 317 77 3 1 315 79 388 2.63e-152 436
Msa0701090 AT1G29120.6 70.325 246 64 3 1 244 79 317 1.82e-114 337
Msa0701090 AT4G25770.1 47.875 353 158 6 16 367 87 414 4.59e-102 308
Msa0701090 AT4G25770.2 48.060 335 146 5 16 348 87 395 2.47e-95 291
Msa0701090 AT5G51180.2 43.137 357 176 6 11 367 24 353 1.09e-90 277
Msa0701090 AT5G51180.1 43.137 357 176 6 11 367 24 353 1.09e-90 277
Msa0701090 AT1G10040.1 42.340 359 177 7 17 369 76 410 1.33e-89 276
Msa0701090 AT1G10040.2 42.604 338 164 7 17 348 76 389 2.10e-83 260

Find 161 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAGAACTTCCTAATTTA+TGG 0.106858 4_4:+72389230 Msa0701090:CDS
CGTTAATTCGTTATCATAAT+TGG 0.135145 4_4:-72388172 None:intergenic
TCCTTTGCTTTCACTGCTTC+TGG 0.142901 4_4:-72392572 None:intergenic
TCAGCTTTCACTCATCATTT+TGG 0.208591 4_4:+72392796 Msa0701090:CDS
CATCTCCTTGTTCTTGTTCA+TGG 0.217800 4_4:+72388375 Msa0701090:CDS
TCTGAAAAGAATCTCCTTTC+TGG 0.236492 4_4:+72389934 Msa0701090:CDS
GCAAAATTCAGGGACGAATT+TGG 0.254234 4_4:-72393441 None:intergenic
GCTTATACTAAGACGTTTAC+TGG 0.260732 4_4:+72389726 Msa0701090:CDS
TTCACATGATACCTATAATA+AGG 0.278470 4_4:+72390006 Msa0701090:CDS
GATGGACGTCTGCAAAATTC+AGG 0.281437 4_4:-72393452 None:intergenic
ATAACATTTGGCTTTCATTA+AGG 0.285674 4_4:+72388224 Msa0701090:five_prime_UTR
TCCTTTCTGGCCCACTCTTT+AGG 0.289850 4_4:+72389947 Msa0701090:CDS
ACTGGGTTGCCCTCCATATA+TGG 0.291897 4_4:-72387689 None:intergenic
TCCAATCATACCTAGAGATA+TGG 0.304912 4_4:-72387441 None:intergenic
TTTCTAGCATGGGAAATTCT+AGG 0.305809 4_4:+72388340 Msa0701090:CDS
AAATGTACTAACCATAAATT+AGG 0.309982 4_4:-72389241 None:intergenic
AATTTAAACAAATAATGTTT+TGG 0.312487 4_4:+72387602 Msa0701090:five_prime_UTR
ACCAGGTTGGTCCTTATTAT+AGG 0.313116 4_4:-72390017 None:intergenic
TTTCGAAAAGCTTGTACTTT+GGG 0.316035 4_4:-72390068 None:intergenic
CCTATGGCTCCTTTATTTGT+TGG 0.329773 4_4:+72390740 Msa0701090:CDS
CTATTAAACTAGTTGTTACT+AGG 0.335716 4_4:-72388148 None:intergenic
TGTTCTTGTTCATGGCATCT+TGG 0.337945 4_4:+72388383 Msa0701090:CDS
GAGGATGGAGGAAGCAAGTC+AGG 0.341385 4_4:-72388084 None:intergenic
ACAAGAAACATCGTCAATAT+TGG 0.350651 4_4:+72392994 Msa0701090:CDS
GCAGTGGGTTAGTGTATGTT+AGG 0.351660 4_4:-72387575 None:intergenic
CTTTCGAAAAGCTTGTACTT+TGG 0.355164 4_4:-72390069 None:intergenic
GGTATGATTGGATTTCTGTT+AGG 0.370258 4_4:+72387452 Msa0701090:five_prime_UTR
TCGAAAGGAGGGATGATTGC+TGG 0.377207 4_4:+72390085 Msa0701090:CDS
GGACGGAGGGACTGATTTGA+TGG 0.379044 4_4:-72393470 None:intergenic
TATAGGTATCATGTGAATAA+AGG 0.383951 4_4:-72390000 None:intergenic
CCCATATCTCTAGGTATGAT+TGG 0.385262 4_4:+72387440 Msa0701090:five_prime_UTR
GGGCCATCGGAAGGGACTGC+AGG 0.390467 4_4:-72392539 None:intergenic
GCTATGAGTTCTACCACTAA+TGG 0.391565 4_4:+72388309 Msa0701090:exon
ATCCAAGTATGAATAACATT+TGG 0.393588 4_4:+72388212 Msa0701090:five_prime_UTR
AGCCAAATGTTATTCATACT+TGG 0.396330 4_4:-72388214 None:intergenic
ACGAAGTGTTGTAAATATAT+CGG 0.397994 4_4:-72393117 None:intergenic
ACATTATTTGTTTAAATTGA+AGG 0.402567 4_4:-72387597 None:intergenic
AGAAATAGAGTTTCCATTAG+TGG 0.402967 4_4:-72388322 None:intergenic
AAGACGTTTACTGGGATTGA+TGG 0.406587 4_4:+72389735 Msa0701090:CDS
AACTCATAGCTTGAGCTCTA+AGG 0.407078 4_4:-72388296 None:intergenic
CCTTTATTTGTTGGTCGGAC+TGG 0.408385 4_4:+72390749 Msa0701090:CDS
CTTGGATTATTAAGCCAGTA+TGG 0.410596 4_4:-72388196 None:intergenic
GTAAAGTTAAGTGCCATATA+TGG 0.412113 4_4:+72387676 Msa0701090:five_prime_UTR
CCTCCTCGCCAATCTTTAGA+TGG 0.414176 4_4:+72392485 Msa0701090:CDS
TAACTTTACAATCATTTCTA+CGG 0.414250 4_4:-72387662 None:intergenic
ATTGGGACGCCCAACAGAAA+TGG 0.424257 4_4:-72390698 None:intergenic
CCAGTCCGACCAACAAATAA+AGG 0.424489 4_4:-72390749 None:intergenic
AACAGAAGAGGTGGTCTGTT+GGG 0.428007 4_4:-72390800 None:intergenic
AACTTGATATAGATATGGTT+GGG 0.431541 4_4:+72391086 Msa0701090:intron
GTATATAATTTCACTGTGCC+TGG 0.431711 4_4:+72393036 Msa0701090:three_prime_UTR
TTCCAGCTTCCATTTCTGTT+GGG 0.433079 4_4:+72390689 Msa0701090:intron
TCTCCACATCTTGGTGTAAG+AGG 0.433082 4_4:+72390139 Msa0701090:CDS
ACTTTAGCATCTCCACATCT+TGG 0.442362 4_4:+72390130 Msa0701090:CDS
ATCTTGGTGTAAGAGGAAAA+AGG 0.442918 4_4:+72390146 Msa0701090:CDS
TTAACAGAGGAGATGATTCA+AGG 0.446850 4_4:+72392741 Msa0701090:intron
AGGAGGGATGATTGCTGGGT+TGG 0.447520 4_4:+72390090 Msa0701090:CDS
TTTCTTGGACCCCACTATGA+TGG 0.447635 4_4:-72387724 None:intergenic
TTTCCAGCTTCCATTTCTGT+TGG 0.449529 4_4:+72390688 Msa0701090:intron
CCAATCATACCTAGAGATAT+GGG 0.450111 4_4:-72387440 None:intergenic
ACAAGAACAAGGAGATGGTC+TGG 0.452536 4_4:-72388369 None:intergenic
TTGTTCATGGCATCTTGGCT+AGG 0.453514 4_4:+72388388 Msa0701090:CDS
AGAAAAGCTTGCTGCACCTA+TGG 0.460424 4_4:+72390724 Msa0701090:CDS
AACTTTACAATCATTTCTAC+GGG 0.463010 4_4:-72387661 None:intergenic
TGGCTCCTTTATTTGTTGGT+CGG 0.464101 4_4:+72390744 Msa0701090:CDS
CGAAAGGAGGGATGATTGCT+GGG 0.465668 4_4:+72390086 Msa0701090:CDS
ATAATTCAAGGACGAATTTG+AGG 0.472360 4_4:-72393408 None:intergenic
GCTAAAGTAATAAAATTGAT+TGG 0.472395 4_4:-72390115 None:intergenic
TTCTTGGACCCCACTATGAT+GGG 0.472495 4_4:-72387723 None:intergenic
ATCCTCGATAAGGAGGGAAA+TGG 0.473394 4_4:+72391117 Msa0701090:CDS
ACCACCTCTTCTGTTGAGAA+TGG 0.476842 4_4:+72390808 Msa0701090:CDS
TAACTTGATATAGATATGGT+TGG 0.477256 4_4:+72391085 Msa0701090:intron
TTTGTTTAAATTGAAGGCAG+TGG 0.480331 4_4:-72387591 None:intergenic
TCCTAAAGAGTGGGCCAGAA+AGG 0.480524 4_4:-72389948 None:intergenic
TAACGAATTAACGACCATAC+TGG 0.484120 4_4:+72388182 Msa0701090:five_prime_UTR
ATGGCTTCTGATTGTGAAGA+TGG 0.489648 4_4:+72390827 Msa0701090:CDS
TAAGGCTGGCAGTTGAACTT+TGG 0.494916 4_4:+72388242 Msa0701090:five_prime_UTR
TGATGGGAGCTCTACAGCAC+TGG 0.498510 4_4:-72387707 None:intergenic
CATTTGGCTTTCATTAAGGC+TGG 0.498985 4_4:+72388228 Msa0701090:five_prime_UTR
ATTCAAGGATTACAACAGTT+GGG 0.500650 4_4:+72392756 Msa0701090:CDS
GCTGGTATCCATCTAAAGAT+TGG 0.501403 4_4:-72392493 None:intergenic
TGATCCTAGAGTAGTGCATT+GGG 0.501596 4_4:+72388035 Msa0701090:five_prime_UTR
GCTGGCAGTTGAACTTTGGC+AGG 0.505752 4_4:+72388246 Msa0701090:five_prime_UTR
TTGTTTAAATTGAAGGCAGT+GGG 0.508708 4_4:-72387590 None:intergenic
TGGAAACTCTATTTCTAGCA+TGG 0.508951 4_4:+72388329 Msa0701090:CDS
GGCCATCGGAAGGGACTGCA+GGG 0.513927 4_4:-72392538 None:intergenic
ACTGATACAGCACAGCGGAC+TGG 0.514147 4_4:+72389174 Msa0701090:intron
CTGATCCTAGAGTAGTGCAT+TGG 0.515726 4_4:+72388034 Msa0701090:five_prime_UTR
GGAAACTCTATTTCTAGCAT+GGG 0.517128 4_4:+72388330 Msa0701090:CDS
AAAATGATCGTCAAAGAAAG+AGG 0.518577 4_4:-72388103 None:intergenic
ATGGACGTCTGCAAAATTCA+GGG 0.518906 4_4:-72393451 None:intergenic
GGAAACTGAGGGCCATCGGA+AGG 0.521343 4_4:-72392548 None:intergenic
TTTGCTTTCACTGCTTCTGG+AGG 0.522349 4_4:-72392569 None:intergenic
GATTCAAGGATTACAACAGT+TGG 0.525073 4_4:+72392755 Msa0701090:CDS
CAACAGAAGAGGTGGTCTGT+TGG 0.525855 4_4:-72390801 None:intergenic
ATTGGAAATCCCATATCTCT+AGG 0.530931 4_4:+72387431 Msa0701090:five_prime_UTR
GTGCAGTTTAGTCATTTCCC+AGG 0.536047 4_4:-72393054 None:intergenic
AAGGATTACAACAGTTGGGA+TGG 0.542099 4_4:+72392760 Msa0701090:CDS
CTTATACTAAGACGTTTACT+GGG 0.544140 4_4:+72389727 Msa0701090:CDS
AACAGAACAATCATACAGTC+AGG 0.545022 4_4:-72393320 None:intergenic
GAGGGAAATGGAGCTCAGTA+AGG 0.546083 4_4:+72391129 Msa0701090:CDS
CAAGAACAAGGAGATGGTCT+GGG 0.548685 4_4:-72388368 None:intergenic
TGGAGGAAACTGAGGGCCAT+CGG 0.548884 4_4:-72392552 None:intergenic
TAGCTTGAGCTCTAAGGCCC+TGG 0.549577 4_4:-72388290 None:intergenic
GGTGGCGCACATCCTCGATA+AGG 0.551809 4_4:+72391107 Msa0701090:CDS
TGATCGTCAAAGAAAGAGGA+TGG 0.554441 4_4:-72388099 None:intergenic
TTTCTGGCCCACTCTTTAGG+AGG 0.557270 4_4:+72389950 Msa0701090:CDS
TGGTCTGTTGGGTTTACCAT+CGG 0.559958 4_4:-72390789 None:intergenic
TGTTGGGTTTACCATCGGTA+AGG 0.561909 4_4:-72390784 None:intergenic
CTCCATTTCCCTCCTTATCG+AGG 0.562222 4_4:-72391119 None:intergenic
AAATTAGGAAGTTCTTTCCA+AGG 0.565004 4_4:-72389226 None:intergenic
TGCCCTGCAGTCCCTTCCGA+TGG 0.565321 4_4:+72392536 Msa0701090:CDS
CCAACAAATAAAGGAGCCAT+AGG 0.566742 4_4:-72390740 None:intergenic
TCAAGACATTTAGAAGAAGT+AGG 0.571095 4_4:+72393268 Msa0701090:three_prime_UTR
GATCTTGCACACAGAACGGC+AGG 0.571400 4_4:+72390040 Msa0701090:CDS
GTTTCCCAATGCACTACTCT+AGG 0.571812 4_4:-72388039 None:intergenic
GAAACTGAGGGCCATCGGAA+GGG 0.573496 4_4:-72392547 None:intergenic
ATTCAACATCAACCACGTGC+TGG 0.573595 4_4:-72392511 None:intergenic
AAGTTAAGTGCCATATATGG+AGG 0.575042 4_4:+72387679 Msa0701090:five_prime_UTR
AATGAATGGTTTCACAATGC+TGG 0.576009 4_4:+72392932 Msa0701090:CDS
TTTACTGGGATTGATGGAGC+AGG 0.577171 4_4:+72389741 Msa0701090:CDS
GGCGCACATCCTCGATAAGG+AGG 0.577833 4_4:+72391110 Msa0701090:CDS
ACTGCTTCTGGAGGAAACTG+AGG 0.578708 4_4:-72392560 None:intergenic
TATATAATTTCACTGTGCCT+GGG 0.580640 4_4:+72393037 Msa0701090:three_prime_UTR
CAAATAAGCCTCCTAAAGAG+TGG 0.584169 4_4:-72389958 None:intergenic
AGTCAGTTGTTCCTTACCGA+TGG 0.586972 4_4:+72390773 Msa0701090:CDS
GCCTATCCAATCAGAAGTGT+AGG 0.589044 4_4:+72387989 Msa0701090:intron
GACTTGATAAATGCAACAGA+AGG 0.589520 4_4:+72387315 Msa0701090:five_prime_UTR
GCCATTCTCAACAGAAGAGG+TGG 0.592717 4_4:-72390809 None:intergenic
TTTCCTCTTACACCAAGATG+TGG 0.596892 4_4:-72390142 None:intergenic
AAATAAGCCTCCTAAAGAGT+GGG 0.606229 4_4:-72389957 None:intergenic
ATGCACTACTCTAGGATCAG+TGG 0.606406 4_4:-72388031 None:intergenic
TCCAGAAGCAGTGAAAGCAA+AGG 0.606566 4_4:+72392571 Msa0701090:CDS
CCATCTAAAGATTGGCGAGG+AGG 0.609081 4_4:-72392485 None:intergenic
TGTGTGCAAGATCACCAGGT+TGG 0.609908 4_4:-72390030 None:intergenic
GTTCTGTGTGCAAGATCACC+AGG 0.612896 4_4:-72390034 None:intergenic
TGGTGATCTTGCACACAGAA+CGG 0.618484 4_4:+72390036 Msa0701090:CDS
TGTAGGAGTAATTGCTCATG+TGG 0.621038 4_4:+72392955 Msa0701090:CDS
GATGGGAGCTCTACAGCACT+GGG 0.625289 4_4:-72387706 None:intergenic
TGGTTTCACAATGCTGGTGT+AGG 0.625663 4_4:+72392938 Msa0701090:CDS
ATGTTGTTATGAGCAAAGAA+AGG 0.626830 4_4:-72392819 None:intergenic
AAACAGTGGACAGAGACACC+AGG 0.629287 4_4:+72388272 Msa0701090:five_prime_UTR
CTGCTTCTGGAGGAAACTGA+GGG 0.630303 4_4:-72392559 None:intergenic
GAAGCCATTCTCAACAGAAG+AGG 0.632448 4_4:-72390812 None:intergenic
CATGAACAAGAACAAGGAGA+TGG 0.634338 4_4:-72388374 None:intergenic
AGGATGGAGGAAGCAAGTCA+GGG 0.636804 4_4:-72388083 None:intergenic
AGTTAAGTGCCATATATGGA+GGG 0.638283 4_4:+72387680 Msa0701090:five_prime_UTR
AACAGTGGACAGAGACACCA+GGG 0.646612 4_4:+72388273 Msa0701090:five_prime_UTR
TGTTACTGTAGATCTGCACT+TGG 0.649162 4_4:+72390925 Msa0701090:intron
TTGATATAGATATGGTTGGG+TGG 0.653394 4_4:+72391089 Msa0701090:intron
GAATATCATGAAATTGTCGA+AGG 0.657213 4_4:+72392632 Msa0701090:CDS
ACCTATAATAAGGACCAACC+TGG 0.658865 4_4:+72390016 Msa0701090:CDS
ACTTTGGCAGGTACAAACAG+TGG 0.662745 4_4:+72388258 Msa0701090:five_prime_UTR
GCGCACATCCTCGATAAGGA+GGG 0.667292 4_4:+72391111 Msa0701090:CDS
AAGTCTAAAGCACCATCGTG+TGG 0.670150 4_4:-72387297 None:intergenic
AGATGCCATGAACAAGAACA+AGG 0.674157 4_4:-72388380 None:intergenic
TATCCATCTAAAGATTGGCG+AGG 0.684476 4_4:-72392488 None:intergenic
ATGGAGGAAGCAAGTCAGGG+AGG 0.684939 4_4:-72388080 None:intergenic
TCGTCAAAGAAAGAGGATGG+AGG 0.695565 4_4:-72388096 None:intergenic
TAGTCAAATCAACCACACGA+TGG 0.724255 4_4:+72387285 None:intergenic
GCCTGATACCCAGAAAACTG+TGG 0.752710 4_4:+72392610 Msa0701090:CDS
TTTAGATGGATACCAGCACG+TGG 0.761315 4_4:+72392499 Msa0701090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAAACAAATAATGTTT+TGG + chr4_4:72387602-72387621 Msa0701090:five_prime_UTR 10.0%
!!! TCATTTTATAAAAGTAATAT+AGG + chr4_4:72388627-72388646 Msa0701090:intron 10.0%
!!! AGTGATTTTTTTTTTTTTTT+TGG + chr4_4:72389308-72389327 Msa0701090:intron 10.0%
!! TTACAACTAAAATTTATATA+TGG - chr4_4:72390217-72390236 None:intergenic 10.0%
!!! GTATAATTTAAATTTTGTTA+GGG - chr4_4:72390534-72390553 None:intergenic 10.0%
!!! AGTATAATTTAAATTTTGTT+AGG - chr4_4:72390535-72390554 None:intergenic 10.0%
!! TAACAAAATTTAAATTATAC+TGG + chr4_4:72390534-72390553 Msa0701090:intron 10.0%
!! AATTTATACTAAAAATTTAC+TGG + chr4_4:72390633-72390652 Msa0701090:intron 10.0%
!!! GTTTATTTAACTAATTTTAA+AGG - chr4_4:72392189-72392208 None:intergenic 10.0%
!! ACATTATTTGTTTAAATTGA+AGG - chr4_4:72387600-72387619 None:intergenic 15.0%
!! TGAAATTAAAGACAAAAAAA+TGG - chr4_4:72389422-72389441 None:intergenic 15.0%
!!! ATTGTTATTTTAAATAGCTT+AGG - chr4_4:72389594-72389613 None:intergenic 15.0%
!! ATTGAAATTTCTCTAATTAT+TGG - chr4_4:72390485-72390504 None:intergenic 15.0%
!! TAAAAAAAAATGATACTGTT+AGG + chr4_4:72391274-72391293 Msa0701090:intron 15.0%
!! TGAATTTCAATATGTAATTA+CGG - chr4_4:72392012-72392031 None:intergenic 15.0%
!! TTAGTTAAATAAACAAATGA+TGG + chr4_4:72392195-72392214 Msa0701090:intron 15.0%
!!! AAAATTCAGTCTTTTATTTT+AGG + chr4_4:72393089-72393108 Msa0701090:three_prime_UTR 15.0%
!!! TTGATATATCTCTTGATTTT+TGG + chr4_4:72387382-72387401 Msa0701090:five_prime_UTR 20.0%
!!! TGATATATCTCTTGATTTTT+GGG + chr4_4:72387383-72387402 Msa0701090:five_prime_UTR 20.0%
!!! AGTATCTATAGTTCTTTTTT+GGG - chr4_4:72387513-72387532 None:intergenic 20.0%
!!! AAGTATCTATAGTTCTTTTT+TGG - chr4_4:72387514-72387533 None:intergenic 20.0%
!!! TTAAACAAATAATGTTTTGG+TGG + chr4_4:72387605-72387624 Msa0701090:five_prime_UTR 20.0%
!! TAACTTTACAATCATTTCTA+CGG - chr4_4:72387665-72387684 None:intergenic 20.0%
!! TTTCTTTATAGATATGCAAA+GGG - chr4_4:72387758-72387777 None:intergenic 20.0%
!!! TTTTCTTTATAGATATGCAA+AGG - chr4_4:72387759-72387778 None:intergenic 20.0%
!!! AATAGATAGAAATTTTACAC+TGG - chr4_4:72387878-72387897 None:intergenic 20.0%
!! TTTATGATTGACAAATAAAC+TGG - chr4_4:72388601-72388620 None:intergenic 20.0%
!! ATTATTGAATTATGAGATAG+TGG - chr4_4:72389057-72389076 None:intergenic 20.0%
!! TAACAAACAGAAAAAGAAAT+AGG - chr4_4:72389089-72389108 None:intergenic 20.0%
!! AAATGTACTAACCATAAATT+AGG - chr4_4:72389244-72389263 None:intergenic 20.0%
!!! TTTTTTTTTTTGGTAAAGCA+TGG + chr4_4:72389318-72389337 Msa0701090:intron 20.0%
!!! AATGTTTTGGAATTTTTCTT+TGG + chr4_4:72389623-72389642 Msa0701090:intron 20.0%
!!! TTATTTCCTTTTATCAAAAC+AGG + chr4_4:72389883-72389902 Msa0701090:intron 20.0%
!! GCTAAAGTAATAAAATTGAT+TGG - chr4_4:72390118-72390137 None:intergenic 20.0%
!! TAATTAGAGAAATTTCAATC+AGG + chr4_4:72390486-72390505 Msa0701090:intron 20.0%
!! TAAAGGATTAATTGAAAAAG+AGG - chr4_4:72390891-72390910 None:intergenic 20.0%
!! TAAAGAAATTACCAAAATTG+AGG - chr4_4:72391067-72391086 None:intergenic 20.0%
!!! TCTTTAACTTGATATAGATA+TGG + chr4_4:72391081-72391100 Msa0701090:intron 20.0%
!! ATCTTACATATGTTAAATAC+TGG - chr4_4:72391206-72391225 None:intergenic 20.0%
!! ATCATAGAGAAATTATATAG+TGG - chr4_4:72391550-72391569 None:intergenic 20.0%
!!! AACTAATTTTAAAGGTTTTC+TGG - chr4_4:72392181-72392200 None:intergenic 20.0%
!! CGAAACTATTAATATAGAAA+TGG + chr4_4:72392389-72392408 Msa0701090:intron 20.0%
!!! TGATTGTTCTGTTTTTTTTA+AGG + chr4_4:72393330-72393349 Msa0701090:three_prime_UTR 20.0%
!!! GTATCTATAGTTCTTTTTTG+GGG - chr4_4:72387512-72387531 None:intergenic 25.0%
! AACTTTACAATCATTTCTAC+GGG - chr4_4:72387664-72387683 None:intergenic 25.0%
! CTATTAGTAGATATATGTCT+TGG + chr4_4:72387893-72387912 Msa0701090:intron 25.0%
! CTATTAAACTAGTTGTTACT+AGG - chr4_4:72388151-72388170 None:intergenic 25.0%
! CGTTAATTCGTTATCATAAT+TGG - chr4_4:72388175-72388194 None:intergenic 25.0%
! ATCCAAGTATGAATAACATT+TGG + chr4_4:72388212-72388231 Msa0701090:five_prime_UTR 25.0%
!!! ATAACATTTGGCTTTCATTA+AGG + chr4_4:72388224-72388243 Msa0701090:five_prime_UTR 25.0%
!! GTATGCATAAAAACTTTTAC+TGG + chr4_4:72388494-72388513 Msa0701090:intron 25.0%
! AGTTTAACTGAAAAGAGTAA+TGG + chr4_4:72388541-72388560 Msa0701090:intron 25.0%
! TGATACTGTTTATGAATAGT+TGG + chr4_4:72388567-72388586 Msa0701090:intron 25.0%
! ATTGACAAATAAACTGGAAA+GGG - chr4_4:72388595-72388614 None:intergenic 25.0%
! GAAATAAATGTATGTACGTA+TGG - chr4_4:72388710-72388729 None:intergenic 25.0%
!!! GTACATACATTTATTTCTGT+TGG + chr4_4:72388713-72388732 Msa0701090:intron 25.0%
!!! ATTTATTTCTGTTGGTCATT+TGG + chr4_4:72388721-72388740 Msa0701090:intron 25.0%
! TGTACATCTGTAACATTTAA+TGG + chr4_4:72389378-72389397 Msa0701090:intron 25.0%
!!! TTTTTCTGGTAGTTATGATT+TGG + chr4_4:72389456-72389475 Msa0701090:intron 25.0%
!! CAATAGTTGTCTTAATGTTT+TGG + chr4_4:72389610-72389629 Msa0701090:intron 25.0%
!! TAATTTTACGTTCATTGAAG+AGG - chr4_4:72389662-72389681 None:intergenic 25.0%
! TGAACGTAAAATTAATTGTC+TGG + chr4_4:72389668-72389687 Msa0701090:intron 25.0%
! AGATTTGTGTGTTAAATGTT+TGG + chr4_4:72389801-72389820 Msa0701090:intron 25.0%
! AAAGAATCAGAACTGAAATT+GGG - chr4_4:72389830-72389849 None:intergenic 25.0%
! AAAAGAATCAGAACTGAAAT+TGG - chr4_4:72389831-72389850 None:intergenic 25.0%
! TATAGGTATCATGTGAATAA+AGG - chr4_4:72390003-72390022 None:intergenic 25.0%
! TTCACATGATACCTATAATA+AGG + chr4_4:72390006-72390025 Msa0701090:CDS 25.0%
! ATATATGGCAAAAAAACCAT+AGG - chr4_4:72390202-72390221 None:intergenic 25.0%
!!! TTGTAAATGAGTGTTGTTTA+TGG + chr4_4:72390231-72390250 Msa0701090:intron 25.0%
! TGATAATATTCAAACTGTCT+TGG + chr4_4:72390273-72390292 Msa0701090:intron 25.0%
! TAACTTGATATAGATATGGT+TGG + chr4_4:72391085-72391104 Msa0701090:intron 25.0%
! AACTTGATATAGATATGGTT+GGG + chr4_4:72391086-72391105 Msa0701090:intron 25.0%
! AATGATTGACATCTATTCAA+TGG - chr4_4:72391428-72391447 None:intergenic 25.0%
! GATCCTCGTAATTTATAATT+AGG + chr4_4:72391668-72391687 Msa0701090:intron 25.0%
! TGACCTAATTATAAATTACG+AGG - chr4_4:72391674-72391693 None:intergenic 25.0%
! AAAAGAAAAATGTAGTTGCA+AGG - chr4_4:72391777-72391796 None:intergenic 25.0%
! AAATGTAAAGTGAGGAAATA+TGG - chr4_4:72391806-72391825 None:intergenic 25.0%
! TATCAAGAAGGGTTAATAAT+TGG + chr4_4:72391940-72391959 Msa0701090:intron 25.0%
! TTTCAATATGTAATTACGGA+GGG - chr4_4:72392008-72392027 None:intergenic 25.0%
! ATTTCAATATGTAATTACGG+AGG - chr4_4:72392009-72392028 None:intergenic 25.0%
! TGGATCAAATCAATTAATAC+TGG + chr4_4:72392215-72392234 Msa0701090:intron 25.0%
!!! ATGAAGATTTGTTAAGTGTT+GGG + chr4_4:72392310-72392329 Msa0701090:intron 25.0%
! AGAATGCTTATATGTTACTA+GGG + chr4_4:72392435-72392454 Msa0701090:intron 25.0%
!! AATTTCAGGTGAAAAATGAA+TGG + chr4_4:72392918-72392937 Msa0701090:intron 25.0%
!!! ACGAAGTGTTGTAAATATAT+CGG - chr4_4:72393120-72393139 None:intergenic 25.0%
!! CATGTTAAGTGACTTTTAAA+TGG + chr4_4:72393378-72393397 Msa0701090:three_prime_UTR 25.0%
! GTCCTTGAATTATCAAAAAT+CGG + chr4_4:72393418-72393437 Msa0701090:three_prime_UTR 25.0%
!!! GTGTCATTTTATCATGCAAT+TGG + chr4_4:72387413-72387432 Msa0701090:five_prime_UTR 30.0%
TTGTTTAAATTGAAGGCAGT+GGG - chr4_4:72387593-72387612 None:intergenic 30.0%
TTTGTTTAAATTGAAGGCAG+TGG - chr4_4:72387594-72387613 None:intergenic 30.0%
GTAAAGTTAAGTGCCATATA+TGG + chr4_4:72387676-72387695 Msa0701090:five_prime_UTR 30.0%
GAAAAGACAAAATCTACTGT+AGG + chr4_4:72387774-72387793 Msa0701090:intron 30.0%
TTAGTAGATATATGTCTTGG+TGG + chr4_4:72387896-72387915 Msa0701090:intron 30.0%
!!! GAAACGCTTTTTTACAGTTA+TGG + chr4_4:72388057-72388076 Msa0701090:five_prime_UTR 30.0%
AAAATGATCGTCAAAGAAAG+AGG - chr4_4:72388106-72388125 None:intergenic 30.0%
AGCCAAATGTTATTCATACT+TGG - chr4_4:72388217-72388236 None:intergenic 30.0%
AGAAATAGAGTTTCCATTAG+TGG - chr4_4:72388325-72388344 None:intergenic 30.0%
AAATTGTTGTGCTGAATTGT+GGG + chr4_4:72388449-72388468 Msa0701090:intron 30.0%
GATTGACAAATAAACTGGAA+AGG - chr4_4:72388596-72388615 None:intergenic 30.0%
AAGTGTGAAAAGTCAAACTT+TGG + chr4_4:72388669-72388688 Msa0701090:intron 30.0%
AGTGTGAAAAGTCAAACTTT+GGG + chr4_4:72388670-72388689 Msa0701090:intron 30.0%
TTGTTCTGTAGTTTAGTGAT+AGG + chr4_4:72388747-72388766 Msa0701090:intron 30.0%
AAATTAGGAAGTTCTTTCCA+AGG - chr4_4:72389229-72389248 None:intergenic 30.0%
GGAAAGAACTTCCTAATTTA+TGG + chr4_4:72389230-72389249 Msa0701090:CDS 30.0%
TTTGGTAAAGCATGGATATA+AGG + chr4_4:72389326-72389345 Msa0701090:intron 30.0%
ACATCTGTAACATTTAATGG+AGG + chr4_4:72389381-72389400 Msa0701090:intron 30.0%
!! GTCAGTAATTCAACTTTTTC+TGG + chr4_4:72389442-72389461 Msa0701090:intron 30.0%
GGAAAAGAAGTTAAAGACAA+AGG - chr4_4:72389522-72389541 None:intergenic 30.0%
! AAAGGTCTATTTGTGTTGTT+TGG + chr4_4:72389557-72389576 Msa0701090:intron 30.0%
CTTATACTAAGACGTTTACT+GGG + chr4_4:72389727-72389746 Msa0701090:CDS 30.0%
!!! GCAATACCTGTTTTGATAAA+AGG - chr4_4:72389892-72389911 None:intergenic 30.0%
TTTCGAAAAGCTTGTACTTT+GGG - chr4_4:72390071-72390090 None:intergenic 30.0%
ACCATATAAATATGTGCCTA+TGG + chr4_4:72390183-72390202 Msa0701090:intron 30.0%
ACCATAGGCACATATTTATA+TGG - chr4_4:72390187-72390206 None:intergenic 30.0%
!! TAAATGAGTGTTGTTTATGG+TGG + chr4_4:72390234-72390253 Msa0701090:intron 30.0%
CTTACATAATACTGCCAATA+TGG + chr4_4:72390326-72390345 Msa0701090:intron 30.0%
!! ATTTTGTTAGGGTTTGTTTG+TGG - chr4_4:72390523-72390542 None:intergenic 30.0%
!! ATCAACATCATTTTCAAGAC+TGG - chr4_4:72390572-72390591 None:intergenic 30.0%
AATATGAAGAGTTTCAACGA+AGG - chr4_4:72390609-72390628 None:intergenic 30.0%
TGGAAAATTTCTGTAAGCAA+AGG + chr4_4:72390847-72390866 Msa0701090:intron 30.0%
ACACTAGATCTTGTAAGTAA+AGG - chr4_4:72390908-72390927 None:intergenic 30.0%
AACAAAGAAAACATACTGAG+AGG - chr4_4:72390999-72391018 None:intergenic 30.0%
! GGTGTATCAATGATAACTTT+TGG + chr4_4:72391032-72391051 Msa0701090:intron 30.0%
AATATGATGATTTCTCCCTT+TGG + chr4_4:72391154-72391173 Msa0701090:intron 30.0%
ATATGATGATTTCTCCCTTT+GGG + chr4_4:72391155-72391174 Msa0701090:intron 30.0%
! TATGTAACTAGCACTAGTTT+AGG - chr4_4:72391387-72391406 None:intergenic 30.0%
!! TTGGTTCTATAATGTTGTAC+TGG + chr4_4:72391595-72391614 Msa0701090:intron 30.0%
! TGGTTCTATAATGTTGTACT+GGG + chr4_4:72391596-72391615 Msa0701090:intron 30.0%
!! AAAGGCATAATTTTGAGCTA+TGG - chr4_4:72391746-72391765 None:intergenic 30.0%
AAGAGAATGAAAGTTATCCA+TGG - chr4_4:72391878-72391897 None:intergenic 30.0%
TATTAACCCTTCTTGATAGA+AGG - chr4_4:72391938-72391957 None:intergenic 30.0%
AATTGCAATACTAGTGTTCT+CGG + chr4_4:72392149-72392168 Msa0701090:intron 30.0%
TGGAACAAAAATATTGTCAG+TGG + chr4_4:72392235-72392254 Msa0701090:intron 30.0%
!! GATGAAGATTTGTTAAGTGT+TGG + chr4_4:72392309-72392328 Msa0701090:intron 30.0%
GAAGATTCCATACGAAAATT+TGG + chr4_4:72392363-72392382 Msa0701090:intron 30.0%
GAAATGGAAGATGTTTGAAA+TGG + chr4_4:72392405-72392424 Msa0701090:intron 30.0%
GAGAATGCTTATATGTTACT+AGG + chr4_4:72392434-72392453 Msa0701090:intron 30.0%
! ATGATATTCCACAGTTTTCT+GGG - chr4_4:72392621-72392640 None:intergenic 30.0%
GAATATCATGAAATTGTCGA+AGG + chr4_4:72392632-72392651 Msa0701090:CDS 30.0%
TCTGTTAAGAAGATACATAG+TGG - chr4_4:72392729-72392748 None:intergenic 30.0%
ACTATGTATCTTCTTAACAG+AGG + chr4_4:72392728-72392747 Msa0701090:intron 30.0%
ATTCAAGGATTACAACAGTT+GGG + chr4_4:72392756-72392775 Msa0701090:CDS 30.0%
ATGTTGTTATGAGCAAAGAA+AGG - chr4_4:72392822-72392841 None:intergenic 30.0%
ACAAGAAACATCGTCAATAT+TGG + chr4_4:72392994-72393013 Msa0701090:CDS 30.0%
TATATAATTTCACTGTGCCT+GGG + chr4_4:72393037-72393056 Msa0701090:three_prime_UTR 30.0%
TCAAGACATTTAGAAGAAGT+AGG + chr4_4:72393268-72393287 Msa0701090:three_prime_UTR 30.0%
ATAATTCAAGGACGAATTTG+AGG - chr4_4:72393411-72393430 None:intergenic 30.0%
GACTTGATAAATGCAACAGA+AGG + chr4_4:72387315-72387334 Msa0701090:five_prime_UTR 35.0%
ATTGGAAATCCCATATCTCT+AGG + chr4_4:72387431-72387450 Msa0701090:five_prime_UTR 35.0%
CCAATCATACCTAGAGATAT+GGG - chr4_4:72387443-72387462 None:intergenic 35.0%
TCCAATCATACCTAGAGATA+TGG - chr4_4:72387444-72387463 None:intergenic 35.0%
GGTATGATTGGATTTCTGTT+AGG + chr4_4:72387452-72387471 Msa0701090:five_prime_UTR 35.0%
AAGTTAAGTGCCATATATGG+AGG + chr4_4:72387679-72387698 Msa0701090:five_prime_UTR 35.0%
AGTTAAGTGCCATATATGGA+GGG + chr4_4:72387680-72387699 Msa0701090:five_prime_UTR 35.0%
CAAAATCCTACACTTCTGAT+TGG - chr4_4:72387998-72388017 None:intergenic 35.0%
TAACGAATTAACGACCATAC+TGG + chr4_4:72388182-72388201 Msa0701090:five_prime_UTR 35.0%
CTTGGATTATTAAGCCAGTA+TGG - chr4_4:72388199-72388218 None:intergenic 35.0%
!! TGGAAACTCTATTTCTAGCA+TGG + chr4_4:72388329-72388348 Msa0701090:CDS 35.0%
!! GGAAACTCTATTTCTAGCAT+GGG + chr4_4:72388330-72388349 Msa0701090:CDS 35.0%
! TTTCTAGCATGGGAAATTCT+AGG + chr4_4:72388340-72388359 Msa0701090:CDS 35.0%
CAAATTGTTGTGCTGAATTG+TGG + chr4_4:72388448-72388467 Msa0701090:intron 35.0%
GTGTGAAAAGTCAAACTTTG+GGG + chr4_4:72388671-72388690 Msa0701090:intron 35.0%
TTAGTGATAGGAGTCTGTAT+AGG + chr4_4:72388759-72388778 Msa0701090:intron 35.0%
AGGAAAAAGAAGTAAGCAAG+TGG + chr4_4:72388851-72388870 Msa0701090:intron 35.0%
GGAAAAAGAAGTAAGCAAGT+GGG + chr4_4:72388852-72388871 Msa0701090:intron 35.0%
GAAAAAGAAGTAAGCAAGTG+GGG + chr4_4:72388853-72388872 Msa0701090:intron 35.0%
TGAGTTCGTTAGAACCTTTA+CGG + chr4_4:72388960-72388979 Msa0701090:intron 35.0%
! GAAACCTTTTCTTCTTACTG+AGG + chr4_4:72388996-72389015 Msa0701090:intron 35.0%
! TTTTTACTGATACAGCACAG+CGG + chr4_4:72389169-72389188 Msa0701090:intron 35.0%
AACATAACATAGAGAACCAC+AGG - chr4_4:72389271-72389290 None:intergenic 35.0%
TGTGGTTCTCTATGTTATGT+TGG + chr4_4:72389270-72389289 Msa0701090:intron 35.0%
AGCATGGATATAAGGTAACA+CGG + chr4_4:72389334-72389353 Msa0701090:intron 35.0%
!! GTCTTTAACTTCTTTTCCTG+AGG + chr4_4:72389524-72389543 Msa0701090:intron 35.0%
TCCTGAGGTAATGCATTAAA+AGG + chr4_4:72389539-72389558 Msa0701090:intron 35.0%
! ACCTTTTAATGCATTACCTC+AGG - chr4_4:72389543-72389562 None:intergenic 35.0%
GCTTATACTAAGACGTTTAC+TGG + chr4_4:72389726-72389745 Msa0701090:CDS 35.0%
TCTGAAAAGAATCTCCTTTC+TGG + chr4_4:72389934-72389953 Msa0701090:CDS 35.0%
AAATAAGCCTCCTAAAGAGT+GGG - chr4_4:72389960-72389979 None:intergenic 35.0%
CTTTCGAAAAGCTTGTACTT+TGG - chr4_4:72390072-72390091 None:intergenic 35.0%
! CAAAGTACAAGCTTTTCGAA+AGG + chr4_4:72390070-72390089 Msa0701090:CDS 35.0%
! ATCTTGGTGTAAGAGGAAAA+AGG + chr4_4:72390146-72390165 Msa0701090:CDS 35.0%
!! TTCTCTGTGTTGATGATTCA+CGG + chr4_4:72390296-72390315 Msa0701090:intron 35.0%
ACCAATTGCGGATCTATTAT+AGG + chr4_4:72390349-72390368 Msa0701090:intron 35.0%
CTAATGAACTTCTTGTCACA+TGG + chr4_4:72390414-72390433 Msa0701090:intron 35.0%
!! CAGCAAGCTTTTCTAGTATT+GGG - chr4_4:72390718-72390737 None:intergenic 35.0%
TTATCATTGATACACCTAGC+AGG - chr4_4:72391028-72391047 None:intergenic 35.0%
TTGATATAGATATGGTTGGG+TGG + chr4_4:72391089-72391108 Msa0701090:intron 35.0%
ATTTCTCTATGATGAAGTGC+TGG + chr4_4:72391557-72391576 Msa0701090:intron 35.0%
TTATCACAGAATAGCGTCAT+CGG + chr4_4:72391646-72391665 Msa0701090:intron 35.0%
TGTAAAGTGAGGAAATATGG+TGG - chr4_4:72391803-72391822 None:intergenic 35.0%
! AGGGTACTAAATGTAAAGTG+AGG - chr4_4:72391814-72391833 None:intergenic 35.0%
ACTTTACATTTAGTACCCTG+AGG + chr4_4:72391815-72391834 Msa0701090:intron 35.0%
AGAATGAAAGTTATCCATGG+AGG - chr4_4:72391875-72391894 None:intergenic 35.0%
ACTATGTTAACCCAGTTCAT+TGG + chr4_4:72391964-72391983 Msa0701090:intron 35.0%
! TGCTTTCATTTTATGCCAAC+AGG - chr4_4:72392067-72392086 None:intergenic 35.0%
!! GTGCTATTTATGCATCTTGT+TGG + chr4_4:72392257-72392276 Msa0701090:intron 35.0%
!! TTTGTTAAGTGTTGGGAAAG+AGG + chr4_4:72392317-72392336 Msa0701090:intron 35.0%
TATGGAATCTTCCTTGAACA+CGG - chr4_4:72392355-72392374 None:intergenic 35.0%
GATTCCATACGAAAATTTGG+AGG + chr4_4:72392366-72392385 Msa0701090:intron 35.0%
! CATGATATTCCACAGTTTTC+TGG - chr4_4:72392622-72392641 None:intergenic 35.0%
!! AAGATACATAGTGGCTTTAG+TGG - chr4_4:72392720-72392739 None:intergenic 35.0%
TTAACAGAGGAGATGATTCA+AGG + chr4_4:72392741-72392760 Msa0701090:intron 35.0%
GATTCAAGGATTACAACAGT+TGG + chr4_4:72392755-72392774 Msa0701090:CDS 35.0%
! TCAGCTTTCACTCATCATTT+TGG + chr4_4:72392796-72392815 Msa0701090:CDS 35.0%
CATCATCTGAGAGATCAATA+AGG - chr4_4:72392860-72392879 None:intergenic 35.0%
CACAAGAACTTCTCAATTTC+AGG + chr4_4:72392904-72392923 Msa0701090:intron 35.0%
AATGAATGGTTTCACAATGC+TGG + chr4_4:72392932-72392951 Msa0701090:CDS 35.0%
GTATATAATTTCACTGTGCC+TGG + chr4_4:72393036-72393055 Msa0701090:three_prime_UTR 35.0%
AACAGAACAATCATACAGTC+AGG - chr4_4:72393323-72393342 None:intergenic 35.0%
!! GGCCGATTTTTGATAATTCA+AGG - chr4_4:72393423-72393442 None:intergenic 35.0%
CCCATATCTCTAGGTATGAT+TGG + chr4_4:72387440-72387459 Msa0701090:five_prime_UTR 40.0%
ATCAAACTCCTGCAAATGCA+AGG - chr4_4:72387810-72387829 None:intergenic 40.0%
GTAATAGTTTCCGTGCGATT+GGG - chr4_4:72387854-72387873 None:intergenic 40.0%
TCCTACACTTCTGATTGGAT+AGG - chr4_4:72387993-72388012 None:intergenic 40.0%
TGATCCTAGAGTAGTGCATT+GGG + chr4_4:72388035-72388054 Msa0701090:five_prime_UTR 40.0%
TGATCGTCAAAGAAAGAGGA+TGG - chr4_4:72388102-72388121 None:intergenic 40.0%
!! CATTTGGCTTTCATTAAGGC+TGG + chr4_4:72388228-72388247 Msa0701090:five_prime_UTR 40.0%
AACTCATAGCTTGAGCTCTA+AGG - chr4_4:72388299-72388318 None:intergenic 40.0%
GCTATGAGTTCTACCACTAA+TGG + chr4_4:72388309-72388328 Msa0701090:exon 40.0%
CATGAACAAGAACAAGGAGA+TGG - chr4_4:72388377-72388396 None:intergenic 40.0%
CATCTCCTTGTTCTTGTTCA+TGG + chr4_4:72388375-72388394 Msa0701090:CDS 40.0%
AGATGCCATGAACAAGAACA+AGG - chr4_4:72388383-72388402 None:intergenic 40.0%
TGTTCTTGTTCATGGCATCT+TGG + chr4_4:72388383-72388402 Msa0701090:CDS 40.0%
!! AAAGTCAAACTTTGGGGCAA+TGG + chr4_4:72388677-72388696 Msa0701090:intron 40.0%
CTATCAACCCTCCAAACTTT+GGG - chr4_4:72388830-72388849 None:intergenic 40.0%
TCTATCAACCCTCCAAACTT+TGG - chr4_4:72388831-72388850 None:intergenic 40.0%
!! AAGTTTGGAGGGTTGATAGA+AGG + chr4_4:72388831-72388850 Msa0701090:intron 40.0%
CACACACACTCTCTTATTGA+GGG - chr4_4:72388918-72388937 None:intergenic 40.0%
TCACACACACTCTCTTATTG+AGG - chr4_4:72388919-72388938 None:intergenic 40.0%
! TCAATAAGAGAGTGTGTGTG+AGG + chr4_4:72388918-72388937 Msa0701090:intron 40.0%
! CAATAAGAGAGTGTGTGTGA+GGG + chr4_4:72388919-72388938 Msa0701090:intron 40.0%
! AATAAGAGAGTGTGTGTGAG+GGG + chr4_4:72388920-72388939 Msa0701090:intron 40.0%
TCGTTAGAACCTTTACGGTT+AGG + chr4_4:72388965-72388984 Msa0701090:intron 40.0%
AGCTCCTCAGTAAGAAGAAA+AGG - chr4_4:72389003-72389022 None:intergenic 40.0%
GTTAGTACATTTCTCACCTG+TGG + chr4_4:72389252-72389271 Msa0701090:intron 40.0%
AAGACGTTTACTGGGATTGA+TGG + chr4_4:72389735-72389754 Msa0701090:CDS 40.0%
CAAATAAGCCTCCTAAAGAG+TGG - chr4_4:72389961-72389980 None:intergenic 40.0%
ACCTATAATAAGGACCAACC+TGG + chr4_4:72390016-72390035 Msa0701090:CDS 40.0%
!! ACCAGGTTGGTCCTTATTAT+AGG - chr4_4:72390020-72390039 None:intergenic 40.0%
! AGTACAAGCTTTTCGAAAGG+AGG + chr4_4:72390073-72390092 Msa0701090:CDS 40.0%
! GTACAAGCTTTTCGAAAGGA+GGG + chr4_4:72390074-72390093 Msa0701090:CDS 40.0%
ACTTTAGCATCTCCACATCT+TGG + chr4_4:72390130-72390149 Msa0701090:CDS 40.0%
TTTCCTCTTACACCAAGATG+TGG - chr4_4:72390145-72390164 None:intergenic 40.0%
!! TGTGTTGATGATTCACGGTT+TGG + chr4_4:72390301-72390320 Msa0701090:intron 40.0%
GCCTATAATAGATCCGCAAT+TGG - chr4_4:72390353-72390372 None:intergenic 40.0%
GCATATGCTTTGCAAATGCA+AGG - chr4_4:72390383-72390402 None:intergenic 40.0%
TGCATTTGCAAAGCATATGC+TGG + chr4_4:72390383-72390402 Msa0701090:intron 40.0%
AACTTCAACCGTTGTGCTTA+GGG + chr4_4:72390441-72390460 Msa0701090:intron 40.0%
TTTCCAGCTTCCATTTCTGT+TGG + chr4_4:72390688-72390707 Msa0701090:intron 40.0%
TTCCAGCTTCCATTTCTGTT+GGG + chr4_4:72390689-72390708 Msa0701090:intron 40.0%
!! GCAGCAAGCTTTTCTAGTAT+TGG - chr4_4:72390719-72390738 None:intergenic 40.0%
CCAACAAATAAAGGAGCCAT+AGG - chr4_4:72390743-72390762 None:intergenic 40.0%
! CCTATGGCTCCTTTATTTGT+TGG + chr4_4:72390740-72390759 Msa0701090:CDS 40.0%
! TGGCTCCTTTATTTGTTGGT+CGG + chr4_4:72390744-72390763 Msa0701090:CDS 40.0%
ATGGCTTCTGATTGTGAAGA+TGG + chr4_4:72390827-72390846 Msa0701090:CDS 40.0%
TGTTACTGTAGATCTGCACT+TGG + chr4_4:72390925-72390944 Msa0701090:intron 40.0%
TCTTTGTTCTACAACCTGCT+AGG + chr4_4:72391011-72391030 Msa0701090:intron 40.0%
AAGTCACAAGACAACCCAAA+GGG - chr4_4:72391172-72391191 None:intergenic 40.0%
CAGCTTTGCACATAAGATCT+TGG + chr4_4:72391450-72391469 Msa0701090:intron 40.0%
AAGATCTTGGATCTGCTTTG+TGG + chr4_4:72391463-72391482 Msa0701090:intron 40.0%
TCTGTCAATTGAAGTCCACA+AGG + chr4_4:72391503-72391522 Msa0701090:intron 40.0%
CTGTCAATTGAAGTCCACAA+GGG + chr4_4:72391504-72391523 Msa0701090:intron 40.0%
GGGAGGTAGGTTATAGTATA+AGG + chr4_4:72391524-72391543 Msa0701090:intron 40.0%
!! AAGTGCTGGTCTATCTCTAT+GGG + chr4_4:72391571-72391590 Msa0701090:intron 40.0%
!! TAATGCGGTTTGTTGACAGA+GGG - chr4_4:72391845-72391864 None:intergenic 40.0%
AGGTAGTCCTTCTATCAAGA+AGG + chr4_4:72391928-72391947 Msa0701090:intron 40.0%
GGTAGTCCTTCTATCAAGAA+GGG + chr4_4:72391929-72391948 Msa0701090:intron 40.0%
GATTAGGCAACCAATGAACT+GGG - chr4_4:72391977-72391996 None:intergenic 40.0%
AGATTAGGCAACCAATGAAC+TGG - chr4_4:72391978-72391997 None:intergenic 40.0%
AATGCTACCACATGCATTCT+TGG - chr4_4:72392095-72392114 None:intergenic 40.0%
CGGGTTATGTGTTGTAAACT+TGG + chr4_4:72392287-72392306 Msa0701090:intron 40.0%
TGTTGGGAAAGAGGTAATGA+TGG + chr4_4:72392326-72392345 Msa0701090:intron 40.0%
! TTCGCCTCCAAATTTTCGTA+TGG - chr4_4:72392373-72392392 None:intergenic 40.0%
TATCCATCTAAAGATTGGCG+AGG - chr4_4:72392491-72392510 None:intergenic 40.0%
GCTGGTATCCATCTAAAGAT+TGG - chr4_4:72392496-72392515 None:intergenic 40.0%
AAGGATTACAACAGTTGGGA+TGG + chr4_4:72392760-72392779 Msa0701090:CDS 40.0%
CATCTGAGAGATCAATAAGG+AGG - chr4_4:72392857-72392876 None:intergenic 40.0%
TGTAGGAGTAATTGCTCATG+TGG + chr4_4:72392955-72392974 Msa0701090:CDS 40.0%
GCGCACGCAAAAAAAATCAT+TGG - chr4_4:72393245-72393264 None:intergenic 40.0%
GCAAAATTCAGGGACGAATT+TGG - chr4_4:72393444-72393463 None:intergenic 40.0%
ATGGACGTCTGCAAAATTCA+GGG - chr4_4:72393454-72393473 None:intergenic 40.0%
!! GCAGTGGGTTAGTGTATGTT+AGG - chr4_4:72387578-72387597 None:intergenic 45.0%
TGTAGAGCTCCCATCATAGT+GGG + chr4_4:72387714-72387733 Msa0701090:intron 45.0%
TTCTTGGACCCCACTATGAT+GGG - chr4_4:72387726-72387745 None:intergenic 45.0%
TTTCTTGGACCCCACTATGA+TGG - chr4_4:72387727-72387746 None:intergenic 45.0%
! TCATAGTGGGGTCCAAGAAA+TGG + chr4_4:72387727-72387746 Msa0701090:intron 45.0%
CAAAGGGCTTCACCATTTCT+TGG - chr4_4:72387742-72387761 None:intergenic 45.0%
CAGTCTTACCTTGCATTTGC+AGG + chr4_4:72387799-72387818 Msa0701090:intron 45.0%
CGTAATAGTTTCCGTGCGAT+TGG - chr4_4:72387855-72387874 None:intergenic 45.0%
TACTATAGCCCCAACGACTA+TGG - chr4_4:72387926-72387945 None:intergenic 45.0%
ATAGTCGTTGGGGCTATAGT+AGG + chr4_4:72387925-72387944 Msa0701090:intron 45.0%
! GCCTATCCAATCAGAAGTGT+AGG + chr4_4:72387989-72388008 Msa0701090:intron 45.0%
!! ATGCACTACTCTAGGATCAG+TGG - chr4_4:72388034-72388053 None:intergenic 45.0%
CTGATCCTAGAGTAGTGCAT+TGG + chr4_4:72388034-72388053 Msa0701090:five_prime_UTR 45.0%
GTTTCCCAATGCACTACTCT+AGG - chr4_4:72388042-72388061 None:intergenic 45.0%
TCGTCAAAGAAAGAGGATGG+AGG - chr4_4:72388099-72388118 None:intergenic 45.0%
TAAGGCTGGCAGTTGAACTT+TGG + chr4_4:72388242-72388261 Msa0701090:five_prime_UTR 45.0%
ACTTTGGCAGGTACAAACAG+TGG + chr4_4:72388258-72388277 Msa0701090:five_prime_UTR 45.0%
CAAGAACAAGGAGATGGTCT+GGG - chr4_4:72388371-72388390 None:intergenic 45.0%
ACAAGAACAAGGAGATGGTC+TGG - chr4_4:72388372-72388391 None:intergenic 45.0%
TTGTTCATGGCATCTTGGCT+AGG + chr4_4:72388388-72388407 Msa0701090:CDS 45.0%
TATAGGCCTGAACCAGTAGA+AGG + chr4_4:72388776-72388795 Msa0701090:intron 45.0%
!! ACATCACCTTCTACTGGTTC+AGG - chr4_4:72388785-72388804 None:intergenic 45.0%
ACCAGTAGAAGGTGATGTGT+TGG + chr4_4:72388787-72388806 Msa0701090:intron 45.0%
ACCAACACATCACCTTCTAC+TGG - chr4_4:72388791-72388810 None:intergenic 45.0%
AGTAGAAGGTGATGTGTTGG+TGG + chr4_4:72388790-72388809 Msa0701090:intron 45.0%
! GTAGAAGGTGATGTGTTGGT+GGG + chr4_4:72388791-72388810 Msa0701090:intron 45.0%
GTAAGGAGAAGCCCAAAGTT+TGG + chr4_4:72388816-72388835 Msa0701090:intron 45.0%
AAGTAAGCAAGTGGGGACAA+AGG + chr4_4:72388860-72388879 Msa0701090:intron 45.0%
AGTAAGCAAGTGGGGACAAA+GGG + chr4_4:72388861-72388880 Msa0701090:intron 45.0%
TTACTGAGGAGCTTATGCTC+TGG + chr4_4:72389010-72389029 Msa0701090:intron 45.0%
TACTGAGGAGCTTATGCTCT+GGG + chr4_4:72389011-72389030 Msa0701090:intron 45.0%
! GAGCAAGAGTTTGATTTCGC+AGG - chr4_4:72389482-72389501 None:intergenic 45.0%
TTTACTGGGATTGATGGAGC+AGG + chr4_4:72389741-72389760 Msa0701090:CDS 45.0%
TGGTGATCTTGCACACAGAA+CGG + chr4_4:72390036-72390055 Msa0701090:CDS 45.0%
! TCTCCACATCTTGGTGTAAG+AGG + chr4_4:72390139-72390158 Msa0701090:CDS 45.0%
TGGTGTAAGAGGAAAAAGGC+AGG + chr4_4:72390150-72390169 Msa0701090:CDS 45.0%
CTGCCAATATGGACCAATTG+CGG + chr4_4:72390337-72390356 Msa0701090:intron 45.0%
GATCCGCAATTGGTCCATAT+TGG - chr4_4:72390343-72390362 None:intergenic 45.0%
CAACTTCAACCGTTGTGCTT+AGG + chr4_4:72390440-72390459 Msa0701090:intron 45.0%
TTATTGGAGCTGCTAGCGAA+GGG - chr4_4:72390469-72390488 None:intergenic 45.0%
ATTATTGGAGCTGCTAGCGA+AGG - chr4_4:72390470-72390489 None:intergenic 45.0%
!! AGAAAAGCTTGCTGCACCTA+TGG + chr4_4:72390724-72390743 Msa0701090:CDS 45.0%
CCAGTCCGACCAACAAATAA+AGG - chr4_4:72390752-72390771 None:intergenic 45.0%
! CCTTTATTTGTTGGTCGGAC+TGG + chr4_4:72390749-72390768 Msa0701090:CDS 45.0%
AGTCAGTTGTTCCTTACCGA+TGG + chr4_4:72390773-72390792 Msa0701090:CDS 45.0%
TGTTGGGTTTACCATCGGTA+AGG - chr4_4:72390787-72390806 None:intergenic 45.0%
TGGTCTGTTGGGTTTACCAT+CGG - chr4_4:72390792-72390811 None:intergenic 45.0%
AACAGAAGAGGTGGTCTGTT+GGG - chr4_4:72390803-72390822 None:intergenic 45.0%
ACCACCTCTTCTGTTGAGAA+TGG + chr4_4:72390808-72390827 Msa0701090:CDS 45.0%
GAAGCCATTCTCAACAGAAG+AGG - chr4_4:72390815-72390834 None:intergenic 45.0%
! GGCACTCTCTTCCTCAATTT+TGG + chr4_4:72391053-72391072 Msa0701090:intron 45.0%
ATCCTCGATAAGGAGGGAAA+TGG + chr4_4:72391117-72391136 Msa0701090:CDS 45.0%
CAAGTCACAAGACAACCCAA+AGG - chr4_4:72391173-72391192 None:intergenic 45.0%
ATCTTGGATCTGCTTTGTGG+TGG + chr4_4:72391466-72391485 Msa0701090:intron 45.0%
CTTCAATTGACAGACACCAG+TGG - chr4_4:72391497-72391516 None:intergenic 45.0%
TCAATTGAAGTCCACAAGGG+AGG + chr4_4:72391507-72391526 Msa0701090:intron 45.0%
ACTATAACCTACCTCCCTTG+TGG - chr4_4:72391521-72391540 None:intergenic 45.0%
!! GAAGTGCTGGTCTATCTCTA+TGG + chr4_4:72391570-72391589 Msa0701090:intron 45.0%
!! CTAATGCGGTTTGTTGACAG+AGG - chr4_4:72391846-72391865 None:intergenic 45.0%
! CATGGAGGTGTATGCTAATG+CGG - chr4_4:72391860-72391879 None:intergenic 45.0%
AACAATCATCTGTGTACCCG+AGG + chr4_4:72391904-72391923 Msa0701090:intron 45.0%
ATAGAAGGACTACCTACCTC+GGG - chr4_4:72391923-72391942 None:intergenic 45.0%
GATAGAAGGACTACCTACCT+CGG - chr4_4:72391924-72391943 None:intergenic 45.0%
ATGTAATTACGGAGGGACAC+TGG - chr4_4:72392001-72392020 None:intergenic 45.0%
CATGTGTCCAAGAATGCATG+TGG + chr4_4:72392085-72392104 Msa0701090:intron 45.0%
TACAACACATAACCCGACAC+TGG - chr4_4:72392283-72392302 None:intergenic 45.0%
AATGATGGCATCCGTGTTCA+AGG + chr4_4:72392341-72392360 Msa0701090:intron 45.0%
TTTAGATGGATACCAGCACG+TGG + chr4_4:72392499-72392518 Msa0701090:CDS 45.0%
ATTCAACATCAACCACGTGC+TGG - chr4_4:72392514-72392533 None:intergenic 45.0%
TTTGCTTTCACTGCTTCTGG+AGG - chr4_4:72392572-72392591 None:intergenic 45.0%
TCCAGAAGCAGTGAAAGCAA+AGG + chr4_4:72392571-72392590 Msa0701090:CDS 45.0%
TCCTTTGCTTTCACTGCTTC+TGG - chr4_4:72392575-72392594 None:intergenic 45.0%
! TCCACAGTTTTCTGGGTATC+AGG - chr4_4:72392614-72392633 None:intergenic 45.0%
TGGTTTCACAATGCTGGTGT+AGG + chr4_4:72392938-72392957 Msa0701090:CDS 45.0%
GTGCAGTTTAGTCATTTCCC+AGG - chr4_4:72393057-72393076 None:intergenic 45.0%
GATGGACGTCTGCAAAATTC+AGG - chr4_4:72393455-72393474 None:intergenic 45.0%
ACTGGGTTGCCCTCCATATA+TGG - chr4_4:72387692-72387711 None:intergenic 50.0%
CTGTAGAGCTCCCATCATAG+TGG + chr4_4:72387713-72387732 Msa0701090:intron 50.0%
GTAGAGCTCCCATCATAGTG+GGG + chr4_4:72387715-72387734 Msa0701090:intron 50.0%
TTTCCGTGCGATTGGGATCA+CGG - chr4_4:72387847-72387866 None:intergenic 50.0%
! TGGTGGTGATCCATAGTCGT+TGG + chr4_4:72387913-72387932 Msa0701090:intron 50.0%
GGTGGTGATCCATAGTCGTT+GGG + chr4_4:72387914-72387933 Msa0701090:intron 50.0%
GTGGTGATCCATAGTCGTTG+GGG + chr4_4:72387915-72387934 Msa0701090:intron 50.0%
CGTTGGGGCTATAGTAGGAT+TGG + chr4_4:72387930-72387949 Msa0701090:intron 50.0%
TCGCTACACGTTCTAGTCGT+GGG + chr4_4:72387962-72387981 Msa0701090:intron 50.0%
AGGATGGAGGAAGCAAGTCA+GGG - chr4_4:72388086-72388105 None:intergenic 50.0%
AAACAGTGGACAGAGACACC+AGG + chr4_4:72388272-72388291 Msa0701090:five_prime_UTR 50.0%
AACAGTGGACAGAGACACCA+GGG + chr4_4:72388273-72388292 Msa0701090:five_prime_UTR 50.0%
! TGATGTGTTGGTGGGCAGTA+AGG + chr4_4:72388799-72388818 Msa0701090:intron 50.0%
AGGAGAAGCCCAAAGTTTGG+AGG + chr4_4:72388819-72388838 Msa0701090:intron 50.0%
GGAGAAGCCCAAAGTTTGGA+GGG + chr4_4:72388820-72388839 Msa0701090:intron 50.0%
CTCTCACTGCCTAACCGTAA+AGG - chr4_4:72388977-72388996 None:intergenic 50.0%
!! GCAGAGTTGAAAAAGCGCCT+TGG + chr4_4:72389209-72389228 Msa0701090:CDS 50.0%
!! CGTTCATTGAAGAGGCACTC+AGG - chr4_4:72389654-72389673 None:intergenic 50.0%
! TCCTTTCTGGCCCACTCTTT+AGG + chr4_4:72389947-72389966 Msa0701090:CDS 50.0%
TCCTAAAGAGTGGGCCAGAA+AGG - chr4_4:72389951-72389970 None:intergenic 50.0%
! TTTCTGGCCCACTCTTTAGG+AGG + chr4_4:72389950-72389969 Msa0701090:CDS 50.0%
TGTGTGCAAGATCACCAGGT+TGG - chr4_4:72390033-72390052 None:intergenic 50.0%
GTTCTGTGTGCAAGATCACC+AGG - chr4_4:72390037-72390056 None:intergenic 50.0%
TCGAAAGGAGGGATGATTGC+TGG + chr4_4:72390085-72390104 Msa0701090:CDS 50.0%
CGAAAGGAGGGATGATTGCT+GGG + chr4_4:72390086-72390105 Msa0701090:CDS 50.0%
GGAAAAAGGCAGGTCTGTTC+TGG + chr4_4:72390160-72390179 Msa0701090:intron 50.0%
GAAGGGAACCCTAAGCACAA+CGG - chr4_4:72390452-72390471 None:intergenic 50.0%
ATTGGGACGCCCAACAGAAA+TGG - chr4_4:72390701-72390720 None:intergenic 50.0%
CAACAGAAGAGGTGGTCTGT+TGG - chr4_4:72390804-72390823 None:intergenic 50.0%
GCCATTCTCAACAGAAGAGG+TGG - chr4_4:72390812-72390831 None:intergenic 50.0%
CTCCATTTCCCTCCTTATCG+AGG - chr4_4:72391122-72391141 None:intergenic 50.0%
GAGGGAAATGGAGCTCAGTA+AGG + chr4_4:72391129-72391148 Msa0701090:CDS 50.0%
CTTTGTGGTGGTAAGTCCAC+TGG + chr4_4:72391478-72391497 Msa0701090:intron 50.0%
TTGAAGTCCACAAGGGAGGT+AGG + chr4_4:72391511-72391530 Msa0701090:intron 50.0%
CTGGTCTATCTCTATGGGCT+TGG + chr4_4:72391576-72391595 Msa0701090:intron 50.0%
GCTATGGCTCAGTGTCTATG+AGG - chr4_4:72391730-72391749 None:intergenic 50.0%
AGTTGCAAGGTCGAGTGCAA+AGG - chr4_4:72391764-72391783 None:intergenic 50.0%
TTGACAGAGGGTCTACCTCA+GGG - chr4_4:72391833-72391852 None:intergenic 50.0%
CGCATTAGCATACACCTCCA+TGG + chr4_4:72391858-72391877 Msa0701090:intron 50.0%
ATCATCTGTGTACCCGAGGT+AGG + chr4_4:72391908-72391927 Msa0701090:intron 50.0%
TGCATCTTGTTGGCCAGTGT+CGG + chr4_4:72392267-72392286 Msa0701090:intron 50.0%
CCATCTAAAGATTGGCGAGG+AGG - chr4_4:72392488-72392507 None:intergenic 50.0%
CCTCCTCGCCAATCTTTAGA+TGG + chr4_4:72392485-72392504 Msa0701090:CDS 50.0%
! CTGCTTCTGGAGGAAACTGA+GGG - chr4_4:72392562-72392581 None:intergenic 50.0%
! ACTGCTTCTGGAGGAAACTG+AGG - chr4_4:72392563-72392582 None:intergenic 50.0%
GCCTGATACCCAGAAAACTG+TGG + chr4_4:72392610-72392629 Msa0701090:CDS 50.0%
GATGGGAGCTCTACAGCACT+GGG - chr4_4:72387709-72387728 None:intergenic 55.0%
TGATGGGAGCTCTACAGCAC+TGG - chr4_4:72387710-72387729 None:intergenic 55.0%
TACCCGTGATCCCAATCGCA+CGG + chr4_4:72387841-72387860 Msa0701090:intron 55.0%
TTCCGTGCGATTGGGATCAC+GGG - chr4_4:72387846-72387865 None:intergenic 55.0%
GTCGCTACACGTTCTAGTCG+TGG + chr4_4:72387961-72387980 Msa0701090:intron 55.0%
ATGGAGGAAGCAAGTCAGGG+AGG - chr4_4:72388083-72388102 None:intergenic 55.0%
GAGGATGGAGGAAGCAAGTC+AGG - chr4_4:72388087-72388106 None:intergenic 55.0%
GCTGGCAGTTGAACTTTGGC+AGG + chr4_4:72388246-72388265 Msa0701090:five_prime_UTR 55.0%
!! TAGCTTGAGCTCTAAGGCCC+TGG - chr4_4:72388293-72388312 None:intergenic 55.0%
AAGCAAGTGGGGACAAAGGG+AGG + chr4_4:72388864-72388883 Msa0701090:intron 55.0%
AGCAAGTGGGGACAAAGGGA+GGG + chr4_4:72388865-72388884 Msa0701090:intron 55.0%
! AGTGTGTGTGAGGGGTGTAG+AGG + chr4_4:72388928-72388947 Msa0701090:intron 55.0%
! GTGTGTGTGAGGGGTGTAGA+GGG + chr4_4:72388929-72388948 Msa0701090:intron 55.0%
! TGAGGAGCTTATGCTCTGGG+CGG + chr4_4:72389014-72389033 Msa0701090:intron 55.0%
ACTGATACAGCACAGCGGAC+TGG + chr4_4:72389174-72389193 Msa0701090:intron 55.0%
GATCTTGCACACAGAACGGC+AGG + chr4_4:72390040-72390059 Msa0701090:CDS 55.0%
AGGAGGGATGATTGCTGGGT+TGG + chr4_4:72390090-72390109 Msa0701090:CDS 55.0%
CGCCCAACAGAAATGGAAGC+TGG - chr4_4:72390694-72390713 None:intergenic 55.0%
GCGCACATCCTCGATAAGGA+GGG + chr4_4:72391111-72391130 Msa0701090:CDS 55.0%
GTTGACAGAGGGTCTACCTC+AGG - chr4_4:72391834-72391853 None:intergenic 55.0%
ACGGAGGGACACTGGAGATT+AGG - chr4_4:72391993-72392012 None:intergenic 55.0%
GGCAGTGACTCTGCAGTGAT+AGG - chr4_4:72392046-72392065 None:intergenic 55.0%
ACTGCAGAGTCACTGCCTGT+TGG + chr4_4:72392049-72392068 Msa0701090:intron 55.0%
GCATCTTGTTGGCCAGTGTC+GGG + chr4_4:72392268-72392287 Msa0701090:intron 55.0%
GAAACTGAGGGCCATCGGAA+GGG - chr4_4:72392550-72392569 None:intergenic 55.0%
TGGAGGAAACTGAGGGCCAT+CGG - chr4_4:72392555-72392574 None:intergenic 55.0%
AAGTGGGGACAAAGGGAGGG+TGG + chr4_4:72388868-72388887 Msa0701090:intron 60.0%
ACAAAGGGAGGGTGGTGAGC+TGG + chr4_4:72388876-72388895 Msa0701090:intron 60.0%
GGTGGCGCACATCCTCGATA+AGG + chr4_4:72391107-72391126 Msa0701090:CDS 60.0%
GGCGCACATCCTCGATAAGG+AGG + chr4_4:72391110-72391129 Msa0701090:CDS 60.0%
GGAAACTGAGGGCCATCGGA+AGG - chr4_4:72392551-72392570 None:intergenic 60.0%
TGCCCTGCAGTCCCTTCCGA+TGG + chr4_4:72392536-72392555 Msa0701090:CDS 65.0%
GGCCATCGGAAGGGACTGCA+GGG - chr4_4:72392541-72392560 None:intergenic 65.0%
GGGCCATCGGAAGGGACTGC+AGG - chr4_4:72392542-72392561 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 72387298 72393481 72387298 ID=Msa0701090;Name=Msa0701090
chr4_4 mRNA 72387298 72393481 72387298 ID=Msa0701090-mRNA-1;Parent=Msa0701090;Name=Msa0701090-mRNA-1;_AED=0.20;_eAED=0.20;_QI=743|1|1|1|0.6|0.63|11|451|382
chr4_4 exon 72387298 72387731 72387298 ID=Msa0701090-mRNA-1:exon:22134;Parent=Msa0701090-mRNA-1
chr4_4 exon 72388003 72388409 72388003 ID=Msa0701090-mRNA-1:exon:22135;Parent=Msa0701090-mRNA-1
chr4_4 exon 72389184 72389251 72389184 ID=Msa0701090-mRNA-1:exon:22136;Parent=Msa0701090-mRNA-1
chr4_4 exon 72389712 72389782 72389712 ID=Msa0701090-mRNA-1:exon:22137;Parent=Msa0701090-mRNA-1
chr4_4 exon 72389905 72390171 72389905 ID=Msa0701090-mRNA-1:exon:22138;Parent=Msa0701090-mRNA-1
chr4_4 exon 72390695 72390858 72390695 ID=Msa0701090-mRNA-1:exon:22139;Parent=Msa0701090-mRNA-1
chr4_4 exon 72390936 72390991 72390936 ID=Msa0701090-mRNA-1:exon:22140;Parent=Msa0701090-mRNA-1
chr4_4 exon 72391098 72391150 72391098 ID=Msa0701090-mRNA-1:exon:22141;Parent=Msa0701090-mRNA-1
chr4_4 exon 72392485 72392653 72392485 ID=Msa0701090-mRNA-1:exon:22142;Parent=Msa0701090-mRNA-1
chr4_4 exon 72392748 72392845 72392748 ID=Msa0701090-mRNA-1:exon:22143;Parent=Msa0701090-mRNA-1
chr4_4 exon 72392926 72393481 72392926 ID=Msa0701090-mRNA-1:exon:22144;Parent=Msa0701090-mRNA-1
chr4_4 five_prime_UTR 72387298 72387731 72387298 ID=Msa0701090-mRNA-1:five_prime_utr;Parent=Msa0701090-mRNA-1
chr4_4 five_prime_UTR 72388003 72388311 72388003 ID=Msa0701090-mRNA-1:five_prime_utr;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72388312 72388409 72388312 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72389184 72389251 72389184 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72389712 72389782 72389712 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72389905 72390171 72389905 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72390695 72390858 72390695 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72390936 72390991 72390936 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72391098 72391150 72391098 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72392485 72392653 72392485 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72392748 72392845 72392748 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 CDS 72392926 72393030 72392926 ID=Msa0701090-mRNA-1:cds;Parent=Msa0701090-mRNA-1
chr4_4 three_prime_UTR 72393031 72393481 72393031 ID=Msa0701090-mRNA-1:three_prime_utr;Parent=Msa0701090-mRNA-1
Gene Sequence

>Msa0701090

ATGAGTTCTACCACTAATGGAAACTCTATTTCTAGCATGGGAAATTCTAGGAGTGACCCAGACCATCTCCTTGTTCTTGTTCATGGCATCTTGGCTAGCACAGCGGACTGGACTTATGCAGAAGCAGAGTTGAAAAAGCGCCTTGGAAAGAACTTCCTAATTTATGTAAGTTCATCAAATGCTTATACTAAGACGTTTACTGGGATTGATGGAGCAGGAAAGCGATTAGCTGATGAAGTATTGCAAGTTGTCAAAAAGACAGAGAGTCTGAAAAGAATCTCCTTTCTGGCCCACTCTTTAGGAGGCTTATTTGCTAGATATGCAATAGCTGTCCTTTATTCACATGATACCTATAATAAGGACCAACCTGGTGATCTTGCACACAGAACGGCAGGCAATTCCCAAAGTACAAGCTTTTCGAAAGGAGGGATGATTGCTGGGTTGGAGCCAATCAATTTTATTACTTTAGCATCTCCACATCTTGGTGTAAGAGGAAAAAGGCAGCTTCCATTTCTGTTGGGCGTCCCAATACTAGAAAAGCTTGCTGCACCTATGGCTCCTTTATTTGTTGGTCGGACTGGTAGTCAGTTGTTCCTTACCGATGGTAAACCCAACAGACCACCTCTTCTGTTGAGAATGGCTTCTGATTGTGAAGATGGAAAATTTCTATCTGCACTTGGAGCATTTAAATGTCGCATTGTTTATGCTAATGTTTCGTACGATCATATGGTTGGGTGGCGCACATCCTCGATAAGGAGGGAAATGGAGCTCAGTAAGCCTCCTCGCCAATCTTTAGATGGATACCAGCACGTGGTTGATGTTGAATATTGCCCTGCAGTCCCTTCCGATGGCCCTCAGTTTCCTCCAGAAGCAGTGAAAGCAAAGGAAGCAGCTCAAAATGCGCCTGATACCCAGAAAACTGTGGAATATCATGAAATTGTCGAAGAGGAGATGATTCAAGGATTACAACAGTTGGGATGGAGAAAAGTTGATGTCAGCTTTCACTCATCATTTTGGCCTTTCTTTGCTCATAACAACATTCATGTGAAAAATGAATGGTTTCACAATGCTGGTGTAGGAGTAATTGCTCATGTGGCTGACAGCTTAAGACAACAAGAAACATCGTCAATATTGGTTGCTAGCTTGTAA
Protein sequence

>Msa0701090

MSSTTNGNSISSMGNSRSDPDHLLVLVHGILASTADWTYAEAELKKRLGKNFLIYVSSSNAYTKTFTGIDGAGKRLADEVLQVVKKTESLKRISFLAHSLGGLFARYAIAVLYSHDTYNKDQPGDLAHRTAGNSQSTSFSKGGMIAGLEPINFITLASPHLGVRGKRQLPFLLGVPILEKLAAPMAPLFVGRTGSQLFLTDGKPNRPPLLLRMASDCEDGKFLSALGAFKCRIVYANVSYDHMVGWRTSSIRREMELSKPPRQSLDGYQHVVDVEYCPAVPSDGPQFPPEAVKAKEAAQNAPDTQKTVEYHEIVEEEMIQGLQQLGWRKVDVSFHSSFWPFFAHNNIHVKNEWFHNAGVGVIAHVADSLRQQETSSILVASL*