Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173290 | XP_013469070.2 | 97.727 | 44 | 1 | 0 | 1 | 44 | 1 | 44 | 7.55e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173290 | A0A396JTJ5 | 97.727 | 44 | 1 | 0 | 1 | 44 | 1 | 44 | 3.60e-23 | 102 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014770 | Msa0173290 | 0.822186 | 2.710596e-53 | -8.615850e-47 |
| Msa0017670 | Msa0173290 | 0.810713 | 1.005316e-50 | -8.615850e-47 |
| Msa0025160 | Msa0173290 | 0.834377 | 3.105379e-56 | -8.615850e-47 |
| Msa0032180 | Msa0173290 | 0.827560 | 1.462871e-54 | -8.615850e-47 |
| Msa0032460 | Msa0173290 | 0.923821 | 1.599941e-89 | -8.615850e-47 |
| Msa0035270 | Msa0173290 | 0.844026 | 9.755601e-59 | -8.615850e-47 |
| Msa0035340 | Msa0173290 | 0.841523 | 4.514111e-58 | -8.615850e-47 |
| Msa0035380 | Msa0173290 | 0.824626 | 7.290695e-54 | -8.615850e-47 |
| Msa0054690 | Msa0173290 | 0.825436 | 4.691981e-54 | -8.615850e-47 |
| Msa0072520 | Msa0173290 | 0.814907 | 1.212882e-51 | -8.615850e-47 |
| Msa0077340 | Msa0173290 | 0.804687 | 1.917010e-49 | -8.615850e-47 |
| Msa0080610 | Msa0173290 | 0.853463 | 2.350179e-61 | -8.615850e-47 |
| Msa0098040 | Msa0173290 | 0.816398 | 5.646378e-52 | -8.615850e-47 |
| Msa0121330 | Msa0173290 | 0.800160 | 1.641891e-48 | -8.615850e-47 |
| Msa0140280 | Msa0173290 | 0.808607 | 2.849520e-50 | -8.615850e-47 |
| Msa0154620 | Msa0173290 | 0.809616 | 1.733114e-50 | -8.615850e-47 |
| Msa0173290 | Msa0176060 | 0.807865 | 4.102252e-50 | -8.615850e-47 |
| Msa0173290 | Msa0185960 | 0.981225 | 4.496310e-152 | -8.615850e-47 |
| Msa0173290 | Msa0233020 | 0.813348 | 2.678449e-51 | -8.615850e-47 |
| Msa0173290 | Msa0272260 | 0.806839 | 6.769347e-50 | -8.615850e-47 |
| Msa0173290 | Msa0307670 | 0.805035 | 1.621211e-49 | -8.615850e-47 |
| Msa0173290 | Msa0367520 | 0.824856 | 6.435749e-54 | -8.615850e-47 |
| Msa0173290 | Msa0380670 | 0.829306 | 5.543387e-55 | -8.615850e-47 |
| Msa0173290 | Msa0415600 | 0.806814 | 6.850614e-50 | -8.615850e-47 |
| Msa0173290 | Msa0421130 | 0.814268 | 1.679624e-51 | -8.615850e-47 |
| Msa0173290 | Msa0422050 | 0.837645 | 4.599680e-57 | -8.615850e-47 |
| Msa0173290 | Msa0430300 | 0.820959 | 5.207490e-53 | -8.615850e-47 |
| Msa0173290 | Msa0432010 | 0.811169 | 8.007955e-51 | -8.615850e-47 |
| Msa0173290 | Msa0466880 | 0.810226 | 1.280413e-50 | -8.615850e-47 |
| Msa0173290 | Msa0468700 | 0.847872 | 8.782817e-60 | -8.615850e-47 |
| Msa0173290 | Msa0481140 | 0.810987 | 8.770572e-51 | -8.615850e-47 |
| Msa0173290 | Msa0481890 | 0.811469 | 6.892193e-51 | -8.615850e-47 |
| Msa0173290 | Msa0514580 | 0.846531 | 2.048754e-59 | -8.615850e-47 |
| Msa0173290 | Msa0517250 | 0.821278 | 4.395905e-53 | -8.615850e-47 |
| Msa0173290 | Msa0520260 | 0.817940 | 2.540797e-52 | -8.615850e-47 |
| Msa0173290 | Msa0520870 | 0.809872 | 1.526644e-50 | -8.615850e-47 |
| Msa0173290 | Msa0529030 | 0.825416 | 4.743535e-54 | -8.615850e-47 |
| Msa0173290 | Msa0530780 | 0.829065 | 6.339049e-55 | -8.615850e-47 |
| Msa0173290 | Msa0550590 | 0.828899 | 6.954323e-55 | -8.615850e-47 |
| Msa0173290 | Msa0567170 | 0.834267 | 3.308942e-56 | -8.615850e-47 |
| Msa0173290 | Msa0580370 | 0.808379 | 3.187646e-50 | -8.615850e-47 |
| Msa0173290 | Msa0585340 | 0.801567 | 8.472102e-49 | -8.615850e-47 |
| Msa0173290 | Msa0587620 | 0.807446 | 5.036095e-50 | -8.615850e-47 |
| Msa0173290 | Msa0590200 | 0.816927 | 4.296113e-52 | -8.615850e-47 |
| Msa0173290 | Msa0591170 | 0.823558 | 1.298683e-53 | -8.615850e-47 |
| Msa0173290 | Msa0606100 | 0.808592 | 2.870932e-50 | -8.615850e-47 |
| Msa0173290 | Msa0615630 | 0.821262 | 4.433872e-53 | -8.615850e-47 |
| Msa0173290 | Msa0619710 | 0.801497 | 8.758223e-49 | -8.615850e-47 |
| Msa0173290 | Msa0620500 | 0.809447 | 1.883787e-50 | -8.615850e-47 |
| Msa0173290 | Msa0647050 | 0.821255 | 4.449552e-53 | -8.615850e-47 |
| Msa0173290 | Msa0658640 | 0.833524 | 5.075534e-56 | -8.615850e-47 |
| Msa0173290 | Msa0661150 | 0.828274 | 9.849278e-55 | -8.615850e-47 |
| Msa0173290 | Msa0668900 | 0.810173 | 1.314517e-50 | -8.615850e-47 |
| Msa0173290 | Msa0687090 | 0.814403 | 1.567931e-51 | -8.615850e-47 |
| Msa0173290 | Msa0698730 | 0.805780 | 1.131544e-49 | -8.615850e-47 |
| Msa0173290 | Msa0703600 | 0.828310 | 9.650559e-55 | -8.615850e-47 |
| Msa0173290 | Msa0709200 | 0.830310 | 3.155529e-55 | -8.615850e-47 |
| Msa0173290 | Msa0709440 | 0.814554 | 1.452005e-51 | -8.615850e-47 |
| Msa0173290 | Msa0716480 | 0.819426 | 1.168909e-52 | -8.615850e-47 |
| Msa0173290 | Msa0730930 | 0.820886 | 5.410770e-53 | -8.615850e-47 |
| Msa0173290 | Msa0735780 | 0.809766 | 1.608667e-50 | -8.615850e-47 |
| Msa0173290 | Msa0740710 | 0.814421 | 1.553864e-51 | -8.615850e-47 |
| Msa0173290 | Msa0752780 | 0.825862 | 3.718347e-54 | -8.615850e-47 |
| Msa0173290 | Msa0758590 | 0.804870 | 1.755252e-49 | -8.615850e-47 |
| Msa0173290 | Msa0773630 | 0.815855 | 7.464587e-52 | -8.615850e-47 |
| Msa0173290 | Msa0780910 | 0.839026 | 2.027011e-57 | -8.615850e-47 |
| Msa0173290 | Msa0792370 | 0.808780 | 2.617728e-50 | -8.615850e-47 |
| Msa0173290 | Msa0798080 | 0.809058 | 2.282612e-50 | -8.615850e-47 |
| Msa0173290 | Msa0811690 | 0.823172 | 1.597926e-53 | -8.615850e-47 |
| Msa0173290 | Msa0818880 | 0.800428 | 1.447870e-48 | -8.615850e-47 |
| Msa0173290 | Msa0821160 | 0.829105 | 6.200752e-55 | -8.615850e-47 |
| Msa0173290 | Msa0833650 | 0.802270 | 6.074733e-49 | -8.615850e-47 |
| Msa0173290 | Msa0837460 | 0.821218 | 4.536947e-53 | -8.615850e-47 |
| Msa0173290 | Msa0851850 | 0.802976 | 4.344338e-49 | -8.615850e-47 |
| Msa0173290 | Msa0855230 | 0.805760 | 1.142450e-49 | -8.615850e-47 |
| Msa0173290 | Msa0864940 | 0.803937 | 2.746114e-49 | -8.615850e-47 |
| Msa0173290 | Msa0894790 | 0.823506 | 1.334950e-53 | -8.615850e-47 |
| Msa0173290 | Msa0909760 | 0.822346 | 2.487611e-53 | -8.615850e-47 |
| Msa0173290 | Msa0921590 | 0.845950 | 2.949848e-59 | -8.615850e-47 |
| Msa0173290 | Msa0994720 | 0.823295 | 1.495655e-53 | -8.615850e-47 |
| Msa0173290 | Msa1033920 | 0.828938 | 6.806206e-55 | -8.615850e-47 |
| Msa0173290 | Msa1034600 | 0.810738 | 9.930219e-51 | -8.615850e-47 |
| Msa0173290 | Msa1042160 | 0.843563 | 1.297263e-58 | -8.615850e-47 |
| Msa0173290 | Msa1042190 | 0.844093 | 9.355762e-59 | -8.615850e-47 |
| Msa0173290 | Msa1074370 | 0.805447 | 1.329140e-49 | -8.615850e-47 |
| Msa0173290 | Msa1077990 | 0.831544 | 1.572232e-55 | -8.615850e-47 |
| Msa0173290 | Msa1078820 | 0.802670 | 5.025448e-49 | -8.615850e-47 |
| Msa0173290 | Msa1078880 | 0.801031 | 1.090648e-48 | -8.615850e-47 |
| Msa0173290 | Msa1080000 | 0.808705 | 2.715641e-50 | -8.615850e-47 |
| Msa0173290 | Msa1084530 | 0.812170 | 4.850823e-51 | -8.615850e-47 |
| Msa0173290 | Msa1105640 | 0.815827 | 7.574324e-52 | -8.615850e-47 |
| Msa0173290 | Msa1116660 | 0.812002 | 5.278972e-51 | -8.615850e-47 |
| Msa0173290 | Msa1125820 | 0.817955 | 2.520716e-52 | -8.615850e-47 |
| Msa0173290 | Msa1125990 | 0.821449 | 4.014660e-53 | -8.615850e-47 |
| Msa0173290 | Msa1132530 | 0.845553 | 3.778980e-59 | -8.615850e-47 |
| Msa0173290 | Msa1132840 | 0.805589 | 1.240860e-49 | -8.615850e-47 |
| Msa0173290 | Msa1154550 | 0.802636 | 5.107639e-49 | -8.615850e-47 |
| Msa0173290 | Msa1162880 | 0.810276 | 1.249144e-50 | -8.615850e-47 |
| Msa0173290 | Msa1167470 | 0.857327 | 1.759825e-62 | -8.615850e-47 |
| Msa0173290 | Msa1171290 | 0.807787 | 4.261771e-50 | -8.615850e-47 |
| Msa0173290 | Msa1215980 | 0.810298 | 1.235491e-50 | -8.615850e-47 |
| Msa0173290 | Msa1216090 | 0.851888 | 6.615959e-61 | -8.615850e-47 |
| Msa0173290 | Msa1216110 | 0.820249 | 7.579939e-53 | -8.615850e-47 |
| Msa0173290 | Msa1216340 | 0.842507 | 2.479661e-58 | -8.615850e-47 |
| Msa0173290 | Msa1217910 | 0.812281 | 4.587971e-51 | -8.615850e-47 |
| Msa0173290 | Msa1219930 | 0.810294 | 1.238358e-50 | -8.615850e-47 |
| Msa0173290 | Msa1226520 | 0.834423 | 3.023619e-56 | -8.615850e-47 |
| Msa0173290 | Msa1240770 | 0.802599 | 5.197386e-49 | -8.615850e-47 |
| Msa0173290 | Msa1262590 | 0.804580 | 2.017947e-49 | -8.615850e-47 |
| Msa0173290 | Msa1263780 | 0.802978 | 4.340485e-49 | -8.615850e-47 |
| Msa0173290 | Msa1306570 | 0.851521 | 8.406733e-61 | -8.615850e-47 |
| Msa0173290 | Msa1339170 | 0.800807 | 1.211737e-48 | -8.615850e-47 |
| Msa0173290 | Msa1343180 | 0.810553 | 1.088359e-50 | -8.615850e-47 |
| Msa0173290 | Msa1349690 | 0.858951 | 5.789727e-63 | -8.615850e-47 |
| Msa0173290 | Msa1358290 | 0.857544 | 1.518030e-62 | -8.615850e-47 |
| Msa0173290 | Msa1359690 | 0.824384 | 8.311363e-54 | -8.615850e-47 |
| Msa0173290 | Msa1368750 | 0.808459 | 3.065009e-50 | -8.615850e-47 |
| Msa0173290 | Msa1374790 | 0.813383 | 2.631732e-51 | -8.615850e-47 |
| Msa0173290 | Msa1375350 | 0.854656 | 1.064454e-61 | -8.615850e-47 |
| Msa0173290 | Msa1392740 | 0.852731 | 3.808694e-61 | -8.615850e-47 |
| Msa0173290 | Msa1405460 | 0.823694 | 1.206378e-53 | -8.615850e-47 |
| Msa0173290 | Msa1409410 | 0.835083 | 2.062675e-56 | -8.615850e-47 |
| Msa0173290 | Msa1414170 | 0.820222 | 7.688337e-53 | -8.615850e-47 |
| Msa0173290 | Msa1451820 | 0.813002 | 3.191089e-51 | -8.615850e-47 |
| Msa0173290 | Msa1462490 | 0.831105 | 2.015058e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173290 | MtrunA17_Chr1g0192821 | 97.727 | 44 | 1 | 0 | 1 | 44 | 1 | 44 | 6.94e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 166 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGACTTATGTATATTT+TGG | 0.110110 | 1_4:+58447812 | Msa0173290:CDS |
| TTGACATACACACTTGTTTA+TGG | 0.163401 | 1_4:+58449503 | Msa0173290:three_prime_UTR |
| TGTGATTGCGAATCTTAATT+TGG | 0.221271 | 1_4:+58451472 | Msa0173290:three_prime_UTR |
| GAGCAAGTAGTGGTTGCTTT+AGG | 0.236125 | 1_4:-58451058 | None:intergenic |
| CTTGATGGAAACAAACAATT+TGG | 0.239299 | 1_4:-58450948 | None:intergenic |
| GGTGGTATCCCTTCACATTT+AGG | 0.241948 | 1_4:-58448518 | None:intergenic |
| ATGTGGAAGTCTTGGGAAAA+TGG | 0.260192 | 1_4:+58450082 | Msa0173290:three_prime_UTR |
| AACGTTATTGCAACGACATT+TGG | 0.261258 | 1_4:+58449476 | Msa0173290:three_prime_UTR |
| ATGTTTGGACCTTGACAAAA+TGG | 0.261385 | 1_4:+58448334 | Msa0173290:CDS |
| TTTAGGCTTAATCCATTCTT+TGG | 0.268713 | 1_4:-58448501 | None:intergenic |
| ATTGATGGAGCCTTTGATTC+AGG | 0.269269 | 1_4:+58450759 | Msa0173290:three_prime_UTR |
| AGCCACATTGCTTTCTTCTT+AGG | 0.272073 | 1_4:-58447729 | None:intergenic |
| AAATATTGAGGAGGTTAATA+AGG | 0.274112 | 1_4:+58451213 | Msa0173290:three_prime_UTR |
| GGTCACTCTGCTTGCTTCTC+TGG | 0.304115 | 1_4:+58447792 | Msa0173290:CDS |
| CGACCGTCTCCAATCATAAA+AGG | 0.307200 | 1_4:+58451080 | Msa0173290:three_prime_UTR |
| CGACCGTGTCAATTTGATTC+AGG | 0.313607 | 1_4:+58450132 | Msa0173290:three_prime_UTR |
| AGTCATTGTACTCTTGCTAT+TGG | 0.314706 | 1_4:+58448716 | Msa0173290:three_prime_UTR |
| GCAAAGTCTTCGGAAGTTAT+TGG | 0.321726 | 1_4:+58449836 | Msa0173290:three_prime_UTR |
| GACACCGATATTGTTATATA+TGG | 0.328819 | 1_4:+58449589 | Msa0173290:three_prime_UTR |
| GGAAATAATGCTTGATCCTT+AGG | 0.346867 | 1_4:+58451188 | Msa0173290:three_prime_UTR |
| CAAGCATTATTTCCACTTGC+AGG | 0.349704 | 1_4:-58451179 | None:intergenic |
| CAGGAGTGACTTGCAAGGTT+TGG | 0.352406 | 1_4:+58451139 | Msa0173290:three_prime_UTR |
| GTCATTGTACTCTTGCTATT+GGG | 0.354949 | 1_4:+58448717 | Msa0173290:three_prime_UTR |
| GAAGTTCTTGGCAAAATTGA+TGG | 0.359155 | 1_4:+58450744 | Msa0173290:three_prime_UTR |
| AGCAAGTAGTGGTTGCTTTA+GGG | 0.360149 | 1_4:-58451057 | None:intergenic |
| TAGATTGGTACCGAAGTTCT+TGG | 0.360287 | 1_4:+58450732 | Msa0173290:intron |
| TGTGGAAGTCTTGGGAAAAT+GGG | 0.379749 | 1_4:+58450083 | Msa0173290:three_prime_UTR |
| ACCAGAAAATTTCGCGTATC+GGG | 0.384937 | 1_4:+58450055 | Msa0173290:intron |
| ACGTTATTGCAACGACATTT+GGG | 0.386709 | 1_4:+58449477 | Msa0173290:three_prime_UTR |
| AAGGTTCTTCACCAGGAGTC+AGG | 0.389468 | 1_4:+58449017 | Msa0173290:three_prime_UTR |
| AAATCCATGGCAGAAGCATT+TGG | 0.396548 | 1_4:-58450363 | None:intergenic |
| AAATGGACATAACAACTTAT+CGG | 0.398694 | 1_4:+58449810 | Msa0173290:three_prime_UTR |
| TTATTTCAGGTATACATCAT+TGG | 0.403078 | 1_4:+58449439 | Msa0173290:intron |
| AATGGACATAACAACTTATC+GGG | 0.405221 | 1_4:+58449811 | Msa0173290:three_prime_UTR |
| AACTCCATCTCATAGTTCTA+AGG | 0.405995 | 1_4:-58448652 | None:intergenic |
| AATACTCCACATATTATTCA+TGG | 0.408013 | 1_4:+58447686 | Msa0173290:exon |
| GATAAGTTGTTATGTCCATT+TGG | 0.409080 | 1_4:-58449808 | None:intergenic |
| TGAAGATATTGTTCTTGCTT+TGG | 0.410809 | 1_4:-58450522 | None:intergenic |
| CGGGAATGATGTGGAAGTCT+TGG | 0.417836 | 1_4:+58450074 | Msa0173290:three_prime_UTR |
| AAAATATTCAAAATGTCCTT+AGG | 0.427856 | 1_4:+58451430 | Msa0173290:three_prime_UTR |
| TTGATCTTTACACCAAAGAA+TGG | 0.429246 | 1_4:+58448489 | Msa0173290:three_prime_UTR |
| CAAGGTTTGGCTTTAACACT+AGG | 0.430586 | 1_4:+58451152 | Msa0173290:three_prime_UTR |
| GGGAATAAGCTTATTGTGTA+TGG | 0.432274 | 1_4:+58448737 | Msa0173290:three_prime_UTR |
| AGGATTAAAACCTAAAACCT+TGG | 0.432402 | 1_4:-58447757 | None:intergenic |
| TATCCGCGTCCGGCAGGCTT+CGG | 0.433353 | 1_4:-58450588 | None:intergenic |
| GCATGACCTGCCCTGACTCC+TGG | 0.433921 | 1_4:-58449028 | None:intergenic |
| AAAGAAGAAGAGATGAAGAA+AGG | 0.439452 | 1_4:-58447516 | None:intergenic |
| CTAATGACTGCAGTAGTGAA+TGG | 0.440066 | 1_4:+58450786 | Msa0173290:three_prime_UTR |
| TTCATGAGAGGCTGACTTGA+TGG | 0.443717 | 1_4:-58450963 | None:intergenic |
| GTCTTGGGAAAATGGGGTTA+TGG | 0.445343 | 1_4:+58450090 | Msa0173290:three_prime_UTR |
| CAGGCTTCGGTTCTAAAGCT+TGG | 0.446872 | 1_4:-58450575 | None:intergenic |
| CCCGCCATATATAACAATAT+CGG | 0.451213 | 1_4:-58449593 | None:intergenic |
| CGATATCGCCGAGTCAAACT+AGG | 0.452268 | 1_4:+58450390 | Msa0173290:three_prime_UTR |
| TGAGTGTATCCGCGTCCGGC+AGG | 0.454398 | 1_4:-58450594 | None:intergenic |
| TGGAGCAAGGTTACTACAAC+AGG | 0.454699 | 1_4:+58448359 | Msa0173290:CDS |
| TTCAACATCCCACACCTTTG+TGG | 0.462742 | 1_4:-58450256 | None:intergenic |
| GATCCTTAGGTGAAATATTG+AGG | 0.465858 | 1_4:+58451201 | Msa0173290:three_prime_UTR |
| CATGTTAATGATGAAGAGCT+TGG | 0.468164 | 1_4:+58451398 | Msa0173290:three_prime_UTR |
| TCAACAAGATCTTCATGTAA+TGG | 0.469515 | 1_4:+58450491 | Msa0173290:three_prime_UTR |
| GGGAATGATGTGGAAGTCTT+GGG | 0.474138 | 1_4:+58450075 | Msa0173290:three_prime_UTR |
| TTATCGGGGTGCAAAGTCTT+CGG | 0.475381 | 1_4:+58449826 | Msa0173290:three_prime_UTR |
| TACCCGGAGAACATAAAATC+AGG | 0.479502 | 1_4:+58451120 | Msa0173290:three_prime_UTR |
| TATCAGTAGACATGAAAAGA+TGG | 0.480772 | 1_4:-58447463 | None:intergenic |
| CAATGACTATCTCTAGGAAC+AGG | 0.483951 | 1_4:-58448701 | None:intergenic |
| ATGGAGATGAATGCTGAGAC+AGG | 0.490805 | 1_4:-58450305 | None:intergenic |
| ATATCTAAGTTACCGTTGTA+TGG | 0.491841 | 1_4:-58451345 | None:intergenic |
| TAATCAAATGTTCCATCCTA+AGG | 0.495488 | 1_4:-58451446 | None:intergenic |
| GTGTTGAGTGTATCCGCGTC+CGG | 0.503593 | 1_4:-58450598 | None:intergenic |
| GTCCTACAAGAACAGCACTA+TGG | 0.503973 | 1_4:-58448406 | None:intergenic |
| CTTGCAGCAGAGCATCCAAA+TGG | 0.505763 | 1_4:+58449793 | Msa0173290:three_prime_UTR |
| CCTCCTCAATATTTCACCTA+AGG | 0.507116 | 1_4:-58451204 | None:intergenic |
| TAATGACTGCAGTAGTGAAT+GGG | 0.507894 | 1_4:+58450787 | Msa0173290:three_prime_UTR |
| TGAATAATCTATCAGGGAGC+AGG | 0.510071 | 1_4:+58450915 | Msa0173290:intron |
| AGCCATAGTGCTGTTCTTGT+AGG | 0.510145 | 1_4:+58448404 | Msa0173290:CDS |
| TCAAGAAAAGAAGACCATCC+TGG | 0.511840 | 1_4:+58449861 | Msa0173290:three_prime_UTR |
| GGATTAAAACCTAAAACCTT+GGG | 0.516565 | 1_4:-58447756 | None:intergenic |
| GACCAGAAAATTTCGCGTAT+CGG | 0.516872 | 1_4:+58450054 | Msa0173290:intron |
| TTCAGGTATACATCATTGGA+GGG | 0.528619 | 1_4:+58449443 | Msa0173290:intron |
| TGAAACAATGACTTGGACTA+GGG | 0.529748 | 1_4:+58448808 | Msa0173290:three_prime_UTR |
| TATTCAAAATGTCCTTAGGA+TGG | 0.529866 | 1_4:+58451434 | Msa0173290:three_prime_UTR |
| TCTTGTTGGTGGTGAAAGAC+TGG | 0.530082 | 1_4:+58448568 | Msa0173290:three_prime_UTR |
| AACACTAACAATTCATTCAA+AGG | 0.530492 | 1_4:-58449766 | None:intergenic |
| CAAATCATGTGGATAATTCG+AGG | 0.531788 | 1_4:+58450988 | Msa0173290:three_prime_UTR |
| TTGTCAAGTTGACAAGTGCT+TGG | 0.532756 | 1_4:-58450423 | None:intergenic |
| GAACCGAAGCCTGCCGGACG+CGG | 0.532959 | 1_4:+58450585 | Msa0173290:three_prime_UTR |
| TTTCAGGTATACATCATTGG+AGG | 0.533107 | 1_4:+58449442 | Msa0173290:intron |
| TGGTCTCAACTTGATATACA+TGG | 0.535726 | 1_4:+58449523 | Msa0173290:three_prime_UTR |
| TTGTATCTACTCCGCCATCC+AGG | 0.538216 | 1_4:-58449879 | None:intergenic |
| CCGATATTGTTATATATGGC+GGG | 0.538845 | 1_4:+58449593 | Msa0173290:three_prime_UTR |
| AGTCACACTGCTACTCTTGT+TGG | 0.540157 | 1_4:+58448554 | Msa0173290:three_prime_UTR |
| GGTCATGCAGCTGTGAATGT+TGG | 0.541807 | 1_4:+58449043 | Msa0173290:three_prime_UTR |
| ATTGTGTATGGTGGAGATAG+TGG | 0.545972 | 1_4:+58448749 | Msa0173290:three_prime_UTR |
| CTCTGCTGTGATTGTGAATG+TGG | 0.547630 | 1_4:-58447632 | None:intergenic |
| CAAGAACAATATCTTCATGT+TGG | 0.548229 | 1_4:+58450528 | Msa0173290:three_prime_UTR |
| TGGATTAAGCCTAAATGTGA+AGG | 0.551727 | 1_4:+58448509 | Msa0173290:three_prime_UTR |
| TGTTCTTGATCAGATTGAGA+TGG | 0.553752 | 1_4:-58450324 | None:intergenic |
| GCTTTAGAACCGAAGCCTGC+CGG | 0.554277 | 1_4:+58450579 | Msa0173290:three_prime_UTR |
| CAAGCTCTTCATCATTAACA+TGG | 0.554718 | 1_4:-58451397 | None:intergenic |
| TCTGATCAAGAACAGACTCC+AGG | 0.556028 | 1_4:+58450333 | Msa0173290:three_prime_UTR |
| GTAGCAGTGTGACTTTCCCT+TGG | 0.559880 | 1_4:-58448545 | None:intergenic |
| GTATACATCATTGGAGGGGT+CGG | 0.560007 | 1_4:+58449448 | Msa0173290:three_prime_UTR |
| CATTAGAAAACCTGAATCAA+AGG | 0.560029 | 1_4:-58450769 | None:intergenic |
| ACACAATACTACATAACTCA+TGG | 0.560215 | 1_4:-58451282 | None:intergenic |
| AAAACCAAATGCTTCTGCCA+TGG | 0.560581 | 1_4:+58450359 | Msa0173290:three_prime_UTR |
| TTGAAACAATGACTTGGACT+AGG | 0.562915 | 1_4:+58448807 | Msa0173290:three_prime_UTR |
| ACCGATATTGTTATATATGG+CGG | 0.564182 | 1_4:+58449592 | Msa0173290:three_prime_UTR |
| GGCACATCACCTTTAACCTC+AGG | 0.564358 | 1_4:-58448680 | None:intergenic |
| CTAAGTTACCGTTGTATGGT+CGG | 0.565702 | 1_4:-58451341 | None:intergenic |
| GAGACTCCATGAATAATATG+TGG | 0.566165 | 1_4:-58447692 | None:intergenic |
| TGACTTTCCCTTGGTGAAGG+TGG | 0.566581 | 1_4:-58448536 | None:intergenic |
| AGCTGTGAATGTTGGAACTA+AGG | 0.566757 | 1_4:+58449051 | Msa0173290:three_prime_UTR |
| AGAGTACAATGACTATCTCT+AGG | 0.569296 | 1_4:-58448707 | None:intergenic |
| GTGTGACTTTCCCTTGGTGA+AGG | 0.574494 | 1_4:-58448539 | None:intergenic |
| ACACTAGGAGGGCCTGCAAG+TGG | 0.574524 | 1_4:+58451167 | Msa0173290:three_prime_UTR |
| AATAAGCTTATTGTGTATGG+TGG | 0.576597 | 1_4:+58448740 | Msa0173290:three_prime_UTR |
| AGGTTCTTCACCAGGAGTCA+GGG | 0.576841 | 1_4:+58449018 | Msa0173290:three_prime_UTR |
| TTGATATTGAAACAATGACT+TGG | 0.577584 | 1_4:+58448801 | Msa0173290:three_prime_UTR |
| GAGTGACCCCATCTTTGAGA+AGG | 0.578017 | 1_4:-58447777 | None:intergenic |
| GGTTTGGCTTTAACACTAGG+AGG | 0.578223 | 1_4:+58451155 | Msa0173290:three_prime_UTR |
| CACACTGCTACTCTTGTTGG+TGG | 0.578346 | 1_4:+58448557 | Msa0173290:three_prime_UTR |
| TAGACCTTAGAACTATGAGA+TGG | 0.585997 | 1_4:+58448648 | Msa0173290:three_prime_UTR |
| ATCAGTAGACATGAAAAGAT+GGG | 0.587480 | 1_4:-58447462 | None:intergenic |
| TGGACCTTGACAAAATGGAA+TGG | 0.587543 | 1_4:+58448339 | Msa0173290:CDS |
| GTGGAAGTCTTGGGAAAATG+GGG | 0.591772 | 1_4:+58450084 | Msa0173290:three_prime_UTR |
| TCTTCACCAGGAGTCAGGGC+AGG | 0.593035 | 1_4:+58449022 | Msa0173290:three_prime_UTR |
| GAATTGCTGCCACAAAGGTG+TGG | 0.593293 | 1_4:+58450247 | Msa0173290:three_prime_UTR |
| CTATGGCTATCTCTAGGACC+TGG | 0.596063 | 1_4:-58448389 | None:intergenic |
| TTTAATCCTTCTCAAAGATG+GGG | 0.598086 | 1_4:+58447771 | Msa0173290:CDS |
| GCGATATCGCTGAAAATCCA+TGG | 0.598217 | 1_4:-58450376 | None:intergenic |
| GAAAAGAAGACCATCCTGGA+TGG | 0.600096 | 1_4:+58449865 | Msa0173290:three_prime_UTR |
| GTTTGGCTTTAACACTAGGA+GGG | 0.600809 | 1_4:+58451156 | Msa0173290:three_prime_UTR |
| ACAGCACTATGGCTATCTCT+AGG | 0.602607 | 1_4:-58448395 | None:intergenic |
| ACGCGGATACACTCAACACT+TGG | 0.606240 | 1_4:+58450602 | Msa0173290:three_prime_UTR |
| ATCTACTCCGCCATCCAGGA+TGG | 0.609038 | 1_4:-58449875 | None:intergenic |
| GAACTTCACAACAGAAGAGG+AGG | 0.609239 | 1_4:+58450223 | Msa0173290:three_prime_UTR |
| GATAGTGGTGATCAGTATCA+TGG | 0.612803 | 1_4:+58448764 | Msa0173290:three_prime_UTR |
| TTCGCGTATCGGGAATGATG+TGG | 0.613683 | 1_4:+58450065 | Msa0173290:three_prime_UTR |
| CAGGAACTTCACAACAGAAG+AGG | 0.614241 | 1_4:+58450220 | Msa0173290:intron |
| ACATGATTTGAGTTCATGAG+AGG | 0.614402 | 1_4:-58450975 | None:intergenic |
| ACTACAACAGGTGAAAAGCC+AGG | 0.619726 | 1_4:+58448371 | Msa0173290:CDS |
| TCTGACTTGTAGCAGGTGTG+GGG | 0.622977 | 1_4:+58449732 | Msa0173290:intron |
| TCTCATGAACTCAAATCATG+TGG | 0.625132 | 1_4:+58450977 | Msa0173290:three_prime_UTR |
| AGCAATGTGGCTGTATCCCA+AGG | 0.627800 | 1_4:+58447740 | Msa0173290:CDS |
| GGATTAAGCCTAAATGTGAA+GGG | 0.630444 | 1_4:+58448510 | Msa0173290:three_prime_UTR |
| TCAGGTATACATCATTGGAG+GGG | 0.630931 | 1_4:+58449444 | Msa0173290:intron |
| GAGGAGAATTGCTGCCACAA+AGG | 0.632549 | 1_4:+58450242 | Msa0173290:three_prime_UTR |
| TGACAAAATGGAATGGAGCA+AGG | 0.633271 | 1_4:+58448346 | Msa0173290:CDS |
| AATTGCTGCCACAAAGGTGT+GGG | 0.636773 | 1_4:+58450248 | Msa0173290:three_prime_UTR |
| GGTTGCTTTAGGGCATAGCA+CGG | 0.638751 | 1_4:-58451047 | None:intergenic |
| GGAGACGGTCGAGCAAGTAG+TGG | 0.648193 | 1_4:-58451068 | None:intergenic |
| AAGAAGACCATCCTGGATGG+CGG | 0.653485 | 1_4:+58449868 | Msa0173290:three_prime_UTR |
| AGGGATACCACCTTCACCAA+GGG | 0.655838 | 1_4:+58448529 | Msa0173290:three_prime_UTR |
| TGGAGATGAATGCTGAGACA+GGG | 0.656111 | 1_4:-58450304 | None:intergenic |
| AAAATCAGGAGTGACTTGCA+AGG | 0.656845 | 1_4:+58451134 | Msa0173290:three_prime_UTR |
| CGTATCTGCCGACCATACAA+CGG | 0.661203 | 1_4:+58451333 | Msa0173290:three_prime_UTR |
| CTACCTGAATCAAATTGACA+CGG | 0.661599 | 1_4:-58450135 | None:intergenic |
| CCTTAGGTGAAATATTGAGG+AGG | 0.666374 | 1_4:+58451204 | Msa0173290:three_prime_UTR |
| ACTAATACAGTGTCTTTACC+CGG | 0.667635 | 1_4:+58451104 | Msa0173290:three_prime_UTR |
| GTATGAGAAAACCGTCCTTG+TGG | 0.675141 | 1_4:-58449553 | None:intergenic |
| AAGGGATACCACCTTCACCA+AGG | 0.676653 | 1_4:+58448528 | Msa0173290:three_prime_UTR |
| ATGGTCAACAGCCACAAGGA+CGG | 0.677236 | 1_4:+58449542 | Msa0173290:three_prime_UTR |
| ATCGGTGTCTGCAACAACAG+CGG | 0.678886 | 1_4:-58449575 | None:intergenic |
| ATACATGGTCAACAGCCACA+AGG | 0.682432 | 1_4:+58449538 | Msa0173290:three_prime_UTR |
| ATGGACATAACAACTTATCG+GGG | 0.694887 | 1_4:+58449812 | Msa0173290:three_prime_UTR |
| CTCCTAAGAAGAAAGCAATG+TGG | 0.723011 | 1_4:+58447727 | Msa0173290:CDS |
| TGGCGGAGTAGATACAAACA+CGG | 0.767759 | 1_4:+58449885 | Msa0173290:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTGAAAATAATGATTTT+TGG | - | chr1_4:58448893-58448912 | None:intergenic | 10.0% |
| !!! | AATCTTATAATTTGTTCATA+TGG | + | chr1_4:58448851-58448870 | Msa0173290:intron | 15.0% |
| !! | TATATAGCATAAGTAATTAA+CGG | - | chr1_4:58449380-58449399 | None:intergenic | 15.0% |
| !! | TTAATTACTTATGCTATATA+TGG | + | chr1_4:58449380-58449399 | Msa0173290:intron | 15.0% |
| !!! | GTTTATTTTTCTCTTTTTTT+CGG | + | chr1_4:58451303-58451322 | Msa0173290:three_prime_UTR | 15.0% |
| !! | TAAGATAGCAAAAATATGAT+TGG | - | chr1_4:58448174-58448193 | None:intergenic | 20.0% |
| !!! | ATAATTTGTTCATATGGAAA+TGG | + | chr1_4:58448857-58448876 | Msa0173290:intron | 20.0% |
| !!! | TATGAATTTAGGAGTATTTT+AGG | - | chr1_4:58449149-58449168 | None:intergenic | 20.0% |
| !!! | TATTTATAGGAATTTGTTCT+AGG | - | chr1_4:58449204-58449223 | None:intergenic | 20.0% |
| !!! | TTCTCAAAAGTGTTATTTAT+AGG | - | chr1_4:58449217-58449236 | None:intergenic | 20.0% |
| !!! | AAAGAACTAATAATGTGTTT+TGG | + | chr1_4:58450032-58450051 | Msa0173290:intron | 20.0% |
| !! | TTAAATTTGTAATGTTATGC+AGG | + | chr1_4:58450201-58450220 | Msa0173290:intron | 20.0% |
| !!! | AATTTGAATTTTGAAAGCAA+AGG | - | chr1_4:58450633-58450652 | None:intergenic | 20.0% |
| !! | TAACAAATGAATAATCTATC+AGG | + | chr1_4:58450908-58450927 | Msa0173290:intron | 20.0% |
| !! | AACAAATGAATAATCTATCA+GGG | + | chr1_4:58450909-58450928 | Msa0173290:intron | 20.0% |
| !! | AAAATATTCAAAATGTCCTT+AGG | + | chr1_4:58451430-58451449 | Msa0173290:three_prime_UTR | 20.0% |
| ! | AATACTCCACATATTATTCA+TGG | + | chr1_4:58447686-58447705 | Msa0173290:exon | 25.0% |
| !! | TTTTAATCCTTCTCAAAGAT+GGG | + | chr1_4:58447770-58447789 | Msa0173290:CDS | 25.0% |
| !! | TGGAAGACTTATGTATATTT+TGG | + | chr1_4:58447812-58447831 | Msa0173290:CDS | 25.0% |
| !! | GGAAGACTTATGTATATTTT+GGG | + | chr1_4:58447813-58447832 | Msa0173290:CDS | 25.0% |
| !! | GAAGACTTATGTATATTTTG+GGG | + | chr1_4:58447814-58447833 | Msa0173290:CDS | 25.0% |
| ! | TATATACACACTGTGTTTAA+TGG | + | chr1_4:58447878-58447897 | Msa0173290:intron | 25.0% |
| ! | TCGTAAGTTTATTACTTCTT+TGG | + | chr1_4:58447916-58447935 | Msa0173290:intron | 25.0% |
| !!! | ATTGAGAAAAGAAAGTGTTT+TGG | - | chr1_4:58448048-58448067 | None:intergenic | 25.0% |
| !!! | ATTTAATTTTAGGGATGTTG+TGG | + | chr1_4:58448287-58448306 | Msa0173290:intron | 25.0% |
| !! | TTTTAGTGATGTACTATGTT+TGG | + | chr1_4:58448319-58448338 | Msa0173290:CDS | 25.0% |
| ! | TTGATATTGAAACAATGACT+TGG | + | chr1_4:58448801-58448820 | Msa0173290:three_prime_UTR | 25.0% |
| !!! | AATAATGATTTTTGGTCACT+AGG | - | chr1_4:58448885-58448904 | None:intergenic | 25.0% |
| ! | TTATGACAGTTGAAAAATCA+AGG | + | chr1_4:58448998-58449017 | Msa0173290:intron | 25.0% |
| !! | TTATTTCAGGTATACATCAT+TGG | + | chr1_4:58449439-58449458 | Msa0173290:intron | 25.0% |
| ! | ATAGGATAAAGCTAATTTGA+CGG | - | chr1_4:58449628-58449647 | None:intergenic | 25.0% |
| ! | AACACTAACAATTCATTCAA+AGG | - | chr1_4:58449769-58449788 | None:intergenic | 25.0% |
| ! | AAATGGACATAACAACTTAT+CGG | + | chr1_4:58449810-58449829 | Msa0173290:three_prime_UTR | 25.0% |
| !!! | TTTGATTTTGAATCCTAGAT+TGG | + | chr1_4:58450717-58450736 | Msa0173290:intron | 25.0% |
| !! | GTATTAGTTCCTTTTATGAT+TGG | - | chr1_4:58451092-58451111 | None:intergenic | 25.0% |
| ! | AAATATTGAGGAGGTTAATA+AGG | + | chr1_4:58451213-58451232 | Msa0173290:three_prime_UTR | 25.0% |
| !! | GTAATTGCTCTGTATTTTAT+TGG | + | chr1_4:58451241-58451260 | Msa0173290:three_prime_UTR | 25.0% |
| !! | ATTTTATTGGATGTGTTTGT+AGG | + | chr1_4:58451254-58451273 | Msa0173290:three_prime_UTR | 25.0% |
| ATCAGTAGACATGAAAAGAT+GGG | - | chr1_4:58447465-58447484 | None:intergenic | 30.0% | |
| TATCAGTAGACATGAAAAGA+TGG | - | chr1_4:58447466-58447485 | None:intergenic | 30.0% | |
| AAAGAAGAAGAGATGAAGAA+AGG | - | chr1_4:58447519-58447538 | None:intergenic | 30.0% | |
| GGATTAAAACCTAAAACCTT+GGG | - | chr1_4:58447759-58447778 | None:intergenic | 30.0% | |
| AGGATTAAAACCTAAAACCT+TGG | - | chr1_4:58447760-58447779 | None:intergenic | 30.0% | |
| !! | GTTTTAATCCTTCTCAAAGA+TGG | + | chr1_4:58447769-58447788 | Msa0173290:CDS | 30.0% |
| TTTAATCCTTCTCAAAGATG+GGG | + | chr1_4:58447771-58447790 | Msa0173290:CDS | 30.0% | |
| TTGTCTTCAACTTCTATCTT+TGG | + | chr1_4:58448015-58448034 | Msa0173290:intron | 30.0% | |
| ! | GGACACAAAATGATAGTTTT+TGG | + | chr1_4:58448425-58448444 | Msa0173290:exon | 30.0% |
| !! | CACAAAATGATAGTTTTTGG+TGG | + | chr1_4:58448428-58448447 | Msa0173290:three_prime_UTR | 30.0% |
| !!! | ATAGTTTTTGGTGGTACAAA+TGG | + | chr1_4:58448437-58448456 | Msa0173290:three_prime_UTR | 30.0% |
| !!! | TAGTTTTTGGTGGTACAAAT+GGG | + | chr1_4:58448438-58448457 | Msa0173290:three_prime_UTR | 30.0% |
| TTGATCTTTACACCAAAGAA+TGG | + | chr1_4:58448489-58448508 | Msa0173290:three_prime_UTR | 30.0% | |
| TTTAGGCTTAATCCATTCTT+TGG | - | chr1_4:58448504-58448523 | None:intergenic | 30.0% | |
| AATAAGCTTATTGTGTATGG+TGG | + | chr1_4:58448740-58448759 | Msa0173290:three_prime_UTR | 30.0% | |
| CTAGGAGAATAAAACAACAA+TGG | - | chr1_4:58449186-58449205 | None:intergenic | 30.0% | |
| TAAATCATCACAAGAGTAAG+TGG | - | chr1_4:58449422-58449441 | None:intergenic | 30.0% | |
| CTCTTGTGATGATTTATTTC+AGG | + | chr1_4:58449426-58449445 | Msa0173290:intron | 30.0% | |
| TTGACATACACACTTGTTTA+TGG | + | chr1_4:58449503-58449522 | Msa0173290:three_prime_UTR | 30.0% | |
| GACACCGATATTGTTATATA+TGG | + | chr1_4:58449589-58449608 | Msa0173290:three_prime_UTR | 30.0% | |
| ACCGATATTGTTATATATGG+CGG | + | chr1_4:58449592-58449611 | Msa0173290:three_prime_UTR | 30.0% | |
| TAGGATAAAGCTAATTTGAC+GGG | - | chr1_4:58449627-58449646 | None:intergenic | 30.0% | |
| GATAAGTTGTTATGTCCATT+TGG | - | chr1_4:58449811-58449830 | None:intergenic | 30.0% | |
| AATGGACATAACAACTTATC+GGG | + | chr1_4:58449811-58449830 | Msa0173290:three_prime_UTR | 30.0% | |
| ! | TTTTATTGCCTAGTTTGACT+CGG | - | chr1_4:58450401-58450420 | None:intergenic | 30.0% |
| TCAACAAGATCTTCATGTAA+TGG | + | chr1_4:58450491-58450510 | Msa0173290:three_prime_UTR | 30.0% | |
| TGAAGATATTGTTCTTGCTT+TGG | - | chr1_4:58450525-58450544 | None:intergenic | 30.0% | |
| CAAGAACAATATCTTCATGT+TGG | + | chr1_4:58450528-58450547 | Msa0173290:three_prime_UTR | 30.0% | |
| ! | CATGTTGGTGAAGATAAAAA+AGG | + | chr1_4:58450543-58450562 | Msa0173290:three_prime_UTR | 30.0% |
| ! | ATCAATTTTGCCAAGAACTT+CGG | - | chr1_4:58450745-58450764 | None:intergenic | 30.0% |
| CATTAGAAAACCTGAATCAA+AGG | - | chr1_4:58450772-58450791 | None:intergenic | 30.0% | |
| AGCAAATTTCAAAAGCTTAC+AGG | - | chr1_4:58450840-58450859 | None:intergenic | 30.0% | |
| GTTACATAAATCGTAGTACT+AGG | - | chr1_4:58450892-58450911 | None:intergenic | 30.0% | |
| CTTGATGGAAACAAACAATT+TGG | - | chr1_4:58450951-58450970 | None:intergenic | 30.0% | |
| ACACAATACTACATAACTCA+TGG | - | chr1_4:58451285-58451304 | None:intergenic | 30.0% | |
| ATATCTAAGTTACCGTTGTA+TGG | - | chr1_4:58451348-58451367 | None:intergenic | 30.0% | |
| TATTCAAAATGTCCTTAGGA+TGG | + | chr1_4:58451434-58451453 | Msa0173290:three_prime_UTR | 30.0% | |
| TAATCAAATGTTCCATCCTA+AGG | - | chr1_4:58451449-58451468 | None:intergenic | 30.0% | |
| GAGACTCCATGAATAATATG+TGG | - | chr1_4:58447695-58447714 | None:intergenic | 35.0% | |
| TATGTGTGCTGAGAGAAATT+AGG | - | chr1_4:58448082-58448101 | None:intergenic | 35.0% | |
| !! | TAATTTTAGGGATGTTGTGG+AGG | + | chr1_4:58448290-58448309 | Msa0173290:intron | 35.0% |
| ATGTTTGGACCTTGACAAAA+TGG | + | chr1_4:58448334-58448353 | Msa0173290:CDS | 35.0% | |
| TGGATTAAGCCTAAATGTGA+AGG | + | chr1_4:58448509-58448528 | Msa0173290:three_prime_UTR | 35.0% | |
| GGATTAAGCCTAAATGTGAA+GGG | + | chr1_4:58448510-58448529 | Msa0173290:three_prime_UTR | 35.0% | |
| ! | GGTGAAAGACTGGTAATTTT+TGG | + | chr1_4:58448578-58448597 | Msa0173290:three_prime_UTR | 35.0% |
| !! | GAAAGACTGGTAATTTTTGG+TGG | + | chr1_4:58448581-58448600 | Msa0173290:three_prime_UTR | 35.0% |
| TAGACCTTAGAACTATGAGA+TGG | + | chr1_4:58448648-58448667 | Msa0173290:three_prime_UTR | 35.0% | |
| ! | AACTCCATCTCATAGTTCTA+AGG | - | chr1_4:58448655-58448674 | None:intergenic | 35.0% |
| ! | AGTTCTTTTCCTGAGGTTAA+AGG | + | chr1_4:58448671-58448690 | Msa0173290:three_prime_UTR | 35.0% |
| AGAGTACAATGACTATCTCT+AGG | - | chr1_4:58448710-58448729 | None:intergenic | 35.0% | |
| ! | AGTCATTGTACTCTTGCTAT+TGG | + | chr1_4:58448716-58448735 | Msa0173290:three_prime_UTR | 35.0% |
| !! | GTCATTGTACTCTTGCTATT+GGG | + | chr1_4:58448717-58448736 | Msa0173290:three_prime_UTR | 35.0% |
| GGGAATAAGCTTATTGTGTA+TGG | + | chr1_4:58448737-58448756 | Msa0173290:three_prime_UTR | 35.0% | |
| ! | TTGAAACAATGACTTGGACT+AGG | + | chr1_4:58448807-58448826 | Msa0173290:three_prime_UTR | 35.0% |
| ! | TGAAACAATGACTTGGACTA+GGG | + | chr1_4:58448808-58448827 | Msa0173290:three_prime_UTR | 35.0% |
| AAAAATCAAGGTTCTTCACC+AGG | + | chr1_4:58449010-58449029 | Msa0173290:three_prime_UTR | 35.0% | |
| !!! | AGCCTTTTTTCACGAACAAT+TGG | + | chr1_4:58449354-58449373 | Msa0173290:intron | 35.0% |
| ! | TTTCAGGTATACATCATTGG+AGG | + | chr1_4:58449442-58449461 | Msa0173290:intron | 35.0% |
| TTCAGGTATACATCATTGGA+GGG | + | chr1_4:58449443-58449462 | Msa0173290:intron | 35.0% | |
| AACGTTATTGCAACGACATT+TGG | + | chr1_4:58449476-58449495 | Msa0173290:three_prime_UTR | 35.0% | |
| ACGTTATTGCAACGACATTT+GGG | + | chr1_4:58449477-58449496 | Msa0173290:three_prime_UTR | 35.0% | |
| TGGTCTCAACTTGATATACA+TGG | + | chr1_4:58449523-58449542 | Msa0173290:three_prime_UTR | 35.0% | |
| CCCGCCATATATAACAATAT+CGG | - | chr1_4:58449596-58449615 | None:intergenic | 35.0% | |
| CCGATATTGTTATATATGGC+GGG | + | chr1_4:58449593-58449612 | Msa0173290:three_prime_UTR | 35.0% | |
| !! | TATTGTTATATATGGCGGGT+AGG | + | chr1_4:58449597-58449616 | Msa0173290:intron | 35.0% |
| AGGATAAAGCTAATTTGACG+GGG | - | chr1_4:58449626-58449645 | None:intergenic | 35.0% | |
| AAAAAGAGCTGCTAAGGAAT+AGG | - | chr1_4:58449646-58449665 | None:intergenic | 35.0% | |
| ! | TAGTGGTAATGTTAGTTTCC+AGG | + | chr1_4:58449688-58449707 | Msa0173290:intron | 35.0% |
| AGGCTATCATAATGAAATCC+TGG | - | chr1_4:58449709-58449728 | None:intergenic | 35.0% | |
| ATGGACATAACAACTTATCG+GGG | + | chr1_4:58449812-58449831 | Msa0173290:three_prime_UTR | 35.0% | |
| CTACCTGAATCAAATTGACA+CGG | - | chr1_4:58450138-58450157 | None:intergenic | 35.0% | |
| TGTTCTTGATCAGATTGAGA+TGG | - | chr1_4:58450327-58450346 | None:intergenic | 35.0% | |
| GAAGTTCTTGGCAAAATTGA+TGG | + | chr1_4:58450744-58450763 | Msa0173290:three_prime_UTR | 35.0% | |
| TAATGACTGCAGTAGTGAAT+GGG | + | chr1_4:58450787-58450806 | Msa0173290:three_prime_UTR | 35.0% | |
| ! | ACATGATTTGAGTTCATGAG+AGG | - | chr1_4:58450978-58450997 | None:intergenic | 35.0% |
| TCTCATGAACTCAAATCATG+TGG | + | chr1_4:58450977-58450996 | Msa0173290:three_prime_UTR | 35.0% | |
| CAAATCATGTGGATAATTCG+AGG | + | chr1_4:58450988-58451007 | Msa0173290:three_prime_UTR | 35.0% | |
| ! | GTTCCTTTTATGATTGGAGA+CGG | - | chr1_4:58451086-58451105 | None:intergenic | 35.0% |
| ACTAATACAGTGTCTTTACC+CGG | + | chr1_4:58451104-58451123 | Msa0173290:three_prime_UTR | 35.0% | |
| ! | ACTCCTGATTTTATGTTCTC+CGG | - | chr1_4:58451126-58451145 | None:intergenic | 35.0% |
| GGAAATAATGCTTGATCCTT+AGG | + | chr1_4:58451188-58451207 | Msa0173290:three_prime_UTR | 35.0% | |
| GATCCTTAGGTGAAATATTG+AGG | + | chr1_4:58451201-58451220 | Msa0173290:three_prime_UTR | 35.0% | |
| CAAGCTCTTCATCATTAACA+TGG | - | chr1_4:58451400-58451419 | None:intergenic | 35.0% | |
| CATGTTAATGATGAAGAGCT+TGG | + | chr1_4:58451398-58451417 | Msa0173290:three_prime_UTR | 35.0% | |
| CTCCTAAGAAGAAAGCAATG+TGG | + | chr1_4:58447727-58447746 | Msa0173290:CDS | 40.0% | |
| AGCCACATTGCTTTCTTCTT+AGG | - | chr1_4:58447732-58447751 | None:intergenic | 40.0% | |
| TGGACCTTGACAAAATGGAA+TGG | + | chr1_4:58448339-58448358 | Msa0173290:CDS | 40.0% | |
| ! | TGCTCCATTCCATTTTGTCA+AGG | - | chr1_4:58448346-58448365 | None:intergenic | 40.0% |
| TGACAAAATGGAATGGAGCA+AGG | + | chr1_4:58448346-58448365 | Msa0173290:CDS | 40.0% | |
| !!! | CTGGTAATTTTTGGTGGTAG+TGG | + | chr1_4:58448587-58448606 | Msa0173290:three_prime_UTR | 40.0% |
| !!! | ATTTTTGGTGGTAGTGGAGA+AGG | + | chr1_4:58448593-58448612 | Msa0173290:three_prime_UTR | 40.0% |
| ! | CAATGACTATCTCTAGGAAC+AGG | - | chr1_4:58448704-58448723 | None:intergenic | 40.0% |
| ! | ATTGTGTATGGTGGAGATAG+TGG | + | chr1_4:58448749-58448768 | Msa0173290:three_prime_UTR | 40.0% |
| ! | GATAGTGGTGATCAGTATCA+TGG | + | chr1_4:58448764-58448783 | Msa0173290:three_prime_UTR | 40.0% |
| AGCTGTGAATGTTGGAACTA+AGG | + | chr1_4:58449051-58449070 | Msa0173290:three_prime_UTR | 40.0% | |
| GTTCGTGAAAAAAGGCTAGA+CGG | - | chr1_4:58449351-58449370 | None:intergenic | 40.0% | |
| GGCCAATTGTTCGTGAAAAA+AGG | - | chr1_4:58449359-58449378 | None:intergenic | 40.0% | |
| TCAGGTATACATCATTGGAG+GGG | + | chr1_4:58449444-58449463 | Msa0173290:intron | 40.0% | |
| CGATACAAAAAGAGCTGCTA+AGG | - | chr1_4:58449652-58449671 | None:intergenic | 40.0% | |
| ! | AGCAGCTCTTTTTGTATCGA+CGG | + | chr1_4:58449653-58449672 | Msa0173290:intron | 40.0% |
| GACGGATGTTAGTAAGTTAG+TGG | + | chr1_4:58449671-58449690 | Msa0173290:intron | 40.0% | |
| GCAAAGTCTTCGGAAGTTAT+TGG | + | chr1_4:58449836-58449855 | Msa0173290:three_prime_UTR | 40.0% | |
| TCAAGAAAAGAAGACCATCC+TGG | + | chr1_4:58449861-58449880 | Msa0173290:three_prime_UTR | 40.0% | |
| GACCAGAAAATTTCGCGTAT+CGG | + | chr1_4:58450054-58450073 | Msa0173290:intron | 40.0% | |
| ACCAGAAAATTTCGCGTATC+GGG | + | chr1_4:58450055-58450074 | Msa0173290:intron | 40.0% | |
| ATGTGGAAGTCTTGGGAAAA+TGG | + | chr1_4:58450082-58450101 | Msa0173290:three_prime_UTR | 40.0% | |
| TGTGGAAGTCTTGGGAAAAT+GGG | + | chr1_4:58450083-58450102 | Msa0173290:three_prime_UTR | 40.0% | |
| CGTGTCAATTTGATTCAGGT+AGG | + | chr1_4:58450136-58450155 | Msa0173290:intron | 40.0% | |
| !!! | GAAGCATTTGGTTTTTGACC+TGG | - | chr1_4:58450354-58450373 | None:intergenic | 40.0% |
| AAAACCAAATGCTTCTGCCA+TGG | + | chr1_4:58450359-58450378 | Msa0173290:three_prime_UTR | 40.0% | |
| !! | AAATCCATGGCAGAAGCATT+TGG | - | chr1_4:58450366-58450385 | None:intergenic | 40.0% |
| !! | TTGTCAAGTTGACAAGTGCT+TGG | - | chr1_4:58450426-58450445 | None:intergenic | 40.0% |
| AAGAACTTCGGTACCAATCT+AGG | - | chr1_4:58450733-58450752 | None:intergenic | 40.0% | |
| ! | TAGATTGGTACCGAAGTTCT+TGG | + | chr1_4:58450732-58450751 | Msa0173290:intron | 40.0% |
| ATTGATGGAGCCTTTGATTC+AGG | + | chr1_4:58450759-58450778 | Msa0173290:three_prime_UTR | 40.0% | |
| CTAATGACTGCAGTAGTGAA+TGG | + | chr1_4:58450786-58450805 | Msa0173290:three_prime_UTR | 40.0% | |
| TGAATAATCTATCAGGGAGC+AGG | + | chr1_4:58450915-58450934 | Msa0173290:intron | 40.0% | |
| ! | AGCAAGTAGTGGTTGCTTTA+GGG | - | chr1_4:58451060-58451079 | None:intergenic | 40.0% |
| TACCCGGAGAACATAAAATC+AGG | + | chr1_4:58451120-58451139 | Msa0173290:three_prime_UTR | 40.0% | |
| ! | CTCCTGATTTTATGTTCTCC+GGG | - | chr1_4:58451125-58451144 | None:intergenic | 40.0% |
| ! | AAAATCAGGAGTGACTTGCA+AGG | + | chr1_4:58451134-58451153 | Msa0173290:three_prime_UTR | 40.0% |
| !! | CAAGGTTTGGCTTTAACACT+AGG | + | chr1_4:58451152-58451171 | Msa0173290:three_prime_UTR | 40.0% |
| !! | GTTTGGCTTTAACACTAGGA+GGG | + | chr1_4:58451156-58451175 | Msa0173290:three_prime_UTR | 40.0% |
| CAAGCATTATTTCCACTTGC+AGG | - | chr1_4:58451182-58451201 | None:intergenic | 40.0% | |
| CCTCCTCAATATTTCACCTA+AGG | - | chr1_4:58451207-58451226 | None:intergenic | 40.0% | |
| CCTTAGGTGAAATATTGAGG+AGG | + | chr1_4:58451204-58451223 | Msa0173290:three_prime_UTR | 40.0% | |
| CTAAGTTACCGTTGTATGGT+CGG | - | chr1_4:58451344-58451363 | None:intergenic | 40.0% | |
| CTCTGCTGTGATTGTGAATG+TGG | - | chr1_4:58447635-58447654 | None:intergenic | 45.0% | |
| ! | TGGCTGTATCCCAAGGTTTT+AGG | + | chr1_4:58447747-58447766 | Msa0173290:CDS | 45.0% |
| TGGAGCAAGGTTACTACAAC+AGG | + | chr1_4:58448359-58448378 | Msa0173290:CDS | 45.0% | |
| ACTACAACAGGTGAAAAGCC+AGG | + | chr1_4:58448371-58448390 | Msa0173290:CDS | 45.0% | |
| ACAGCACTATGGCTATCTCT+AGG | - | chr1_4:58448398-58448417 | None:intergenic | 45.0% | |
| ! | AGCCATAGTGCTGTTCTTGT+AGG | + | chr1_4:58448404-58448423 | Msa0173290:CDS | 45.0% |
| GTCCTACAAGAACAGCACTA+TGG | - | chr1_4:58448409-58448428 | None:intergenic | 45.0% | |
| GGTGGTATCCCTTCACATTT+AGG | - | chr1_4:58448521-58448540 | None:intergenic | 45.0% | |
| AGTCACACTGCTACTCTTGT+TGG | + | chr1_4:58448554-58448573 | Msa0173290:three_prime_UTR | 45.0% | |
| !! | TCTTGTTGGTGGTGAAAGAC+TGG | + | chr1_4:58448568-58448587 | Msa0173290:three_prime_UTR | 45.0% |
| ! | GAGATGGAGTTCTTTTCCTG+AGG | + | chr1_4:58448664-58448683 | Msa0173290:three_prime_UTR | 45.0% |
| ! | CAATGACTTGGACTAGGGTA+TGG | + | chr1_4:58448813-58448832 | Msa0173290:intron | 45.0% |
| GTATACATCATTGGAGGGGT+CGG | + | chr1_4:58449448-58449467 | Msa0173290:three_prime_UTR | 45.0% | |
| ATACATGGTCAACAGCCACA+AGG | + | chr1_4:58449538-58449557 | Msa0173290:three_prime_UTR | 45.0% | |
| GTATGAGAAAACCGTCCTTG+TGG | - | chr1_4:58449556-58449575 | None:intergenic | 45.0% | |
| TTATCGGGGTGCAAAGTCTT+CGG | + | chr1_4:58449826-58449845 | Msa0173290:three_prime_UTR | 45.0% | |
| GAAAAGAAGACCATCCTGGA+TGG | + | chr1_4:58449865-58449884 | Msa0173290:three_prime_UTR | 45.0% | |
| TGGCGGAGTAGATACAAACA+CGG | + | chr1_4:58449885-58449904 | Msa0173290:three_prime_UTR | 45.0% | |
| ! | TCCCGATACGCGAAATTTTC+TGG | - | chr1_4:58450059-58450078 | None:intergenic | 45.0% |
| GGGAATGATGTGGAAGTCTT+GGG | + | chr1_4:58450075-58450094 | Msa0173290:three_prime_UTR | 45.0% | |
| GTGGAAGTCTTGGGAAAATG+GGG | + | chr1_4:58450084-58450103 | Msa0173290:three_prime_UTR | 45.0% | |
| GTCTTGGGAAAATGGGGTTA+TGG | + | chr1_4:58450090-58450109 | Msa0173290:three_prime_UTR | 45.0% | |
| CGACCGTGTCAATTTGATTC+AGG | + | chr1_4:58450132-58450151 | Msa0173290:three_prime_UTR | 45.0% | |
| CAGGAACTTCACAACAGAAG+AGG | + | chr1_4:58450220-58450239 | Msa0173290:intron | 45.0% | |
| GAACTTCACAACAGAAGAGG+AGG | + | chr1_4:58450223-58450242 | Msa0173290:three_prime_UTR | 45.0% | |
| ! | AATTGCTGCCACAAAGGTGT+GGG | + | chr1_4:58450248-58450267 | Msa0173290:three_prime_UTR | 45.0% |
| TTCAACATCCCACACCTTTG+TGG | - | chr1_4:58450259-58450278 | None:intergenic | 45.0% | |
| TGGAGATGAATGCTGAGACA+GGG | - | chr1_4:58450307-58450326 | None:intergenic | 45.0% | |
| ATGGAGATGAATGCTGAGAC+AGG | - | chr1_4:58450308-58450327 | None:intergenic | 45.0% | |
| TCTGATCAAGAACAGACTCC+AGG | + | chr1_4:58450333-58450352 | Msa0173290:three_prime_UTR | 45.0% | |
| GCGATATCGCTGAAAATCCA+TGG | - | chr1_4:58450379-58450398 | None:intergenic | 45.0% | |
| ! | GTGAATGGGAGACTTTTCAG+AGG | + | chr1_4:58450801-58450820 | Msa0173290:three_prime_UTR | 45.0% |
| !! | TTCATGAGAGGCTGACTTGA+TGG | - | chr1_4:58450966-58450985 | None:intergenic | 45.0% |
| ! | GAGCAAGTAGTGGTTGCTTT+AGG | - | chr1_4:58451061-58451080 | None:intergenic | 45.0% |
| CGACCGTCTCCAATCATAAA+AGG | + | chr1_4:58451080-58451099 | Msa0173290:three_prime_UTR | 45.0% | |
| !! | GGTTTGGCTTTAACACTAGG+AGG | + | chr1_4:58451155-58451174 | Msa0173290:three_prime_UTR | 45.0% |
| !!! | ATTTGATTTAATTTAATTTT+AGG | + | chr1_4:58448277-58448296 | Msa0173290:intron | 5.0% |
| !!! | TTTGATTTAATTTAATTTTA+GGG | + | chr1_4:58448278-58448297 | Msa0173290:intron | 5.0% |
| !! | ATTAAAATATATATGAATTT+AGG | - | chr1_4:58449160-58449179 | None:intergenic | 5.0% |
| AGCAATGTGGCTGTATCCCA+AGG | + | chr1_4:58447740-58447759 | Msa0173290:CDS | 50.0% | |
| ! | GAGTGACCCCATCTTTGAGA+AGG | - | chr1_4:58447780-58447799 | None:intergenic | 50.0% |
| !! | CTATGGCTATCTCTAGGACC+TGG | - | chr1_4:58448392-58448411 | None:intergenic | 50.0% |
| AAGGGATACCACCTTCACCA+AGG | + | chr1_4:58448528-58448547 | Msa0173290:three_prime_UTR | 50.0% | |
| AGGGATACCACCTTCACCAA+GGG | + | chr1_4:58448529-58448548 | Msa0173290:three_prime_UTR | 50.0% | |
| TGACTTTCCCTTGGTGAAGG+TGG | - | chr1_4:58448539-58448558 | None:intergenic | 50.0% | |
| GTGTGACTTTCCCTTGGTGA+AGG | - | chr1_4:58448542-58448561 | None:intergenic | 50.0% | |
| GTAGCAGTGTGACTTTCCCT+TGG | - | chr1_4:58448548-58448567 | None:intergenic | 50.0% | |
| CACACTGCTACTCTTGTTGG+TGG | + | chr1_4:58448557-58448576 | Msa0173290:three_prime_UTR | 50.0% | |
| GGCACATCACCTTTAACCTC+AGG | - | chr1_4:58448683-58448702 | None:intergenic | 50.0% | |
| AAGGTTCTTCACCAGGAGTC+AGG | + | chr1_4:58449017-58449036 | Msa0173290:three_prime_UTR | 50.0% | |
| AGGTTCTTCACCAGGAGTCA+GGG | + | chr1_4:58449018-58449037 | Msa0173290:three_prime_UTR | 50.0% | |
| GGTCATGCAGCTGTGAATGT+TGG | + | chr1_4:58449043-58449062 | Msa0173290:three_prime_UTR | 50.0% | |
| ATGGTCAACAGCCACAAGGA+CGG | + | chr1_4:58449542-58449561 | Msa0173290:three_prime_UTR | 50.0% | |
| ! | ATCGGTGTCTGCAACAACAG+CGG | - | chr1_4:58449578-58449597 | None:intergenic | 50.0% |
| ACCTGCTACAAGTCAGAGAC+AGG | - | chr1_4:58449729-58449748 | None:intergenic | 50.0% | |
| ! | TCTCTGACTTGTAGCAGGTG+TGG | + | chr1_4:58449730-58449749 | Msa0173290:intron | 50.0% |
| ! | CTCTGACTTGTAGCAGGTGT+GGG | + | chr1_4:58449731-58449750 | Msa0173290:intron | 50.0% |
| ! | TCTGACTTGTAGCAGGTGTG+GGG | + | chr1_4:58449732-58449751 | Msa0173290:intron | 50.0% |
| ! | CTTGCAGCAGAGCATCCAAA+TGG | + | chr1_4:58449793-58449812 | Msa0173290:three_prime_UTR | 50.0% |
| AAGAAGACCATCCTGGATGG+CGG | + | chr1_4:58449868-58449887 | Msa0173290:three_prime_UTR | 50.0% | |
| TTGTATCTACTCCGCCATCC+AGG | - | chr1_4:58449882-58449901 | None:intergenic | 50.0% | |
| TTCGCGTATCGGGAATGATG+TGG | + | chr1_4:58450065-58450084 | Msa0173290:three_prime_UTR | 50.0% | |
| CGGGAATGATGTGGAAGTCT+TGG | + | chr1_4:58450074-58450093 | Msa0173290:three_prime_UTR | 50.0% | |
| GAGGAGAATTGCTGCCACAA+AGG | + | chr1_4:58450242-58450261 | Msa0173290:three_prime_UTR | 50.0% | |
| GAATTGCTGCCACAAAGGTG+TGG | + | chr1_4:58450247-58450266 | Msa0173290:three_prime_UTR | 50.0% | |
| CGATATCGCCGAGTCAAACT+AGG | + | chr1_4:58450390-58450409 | Msa0173290:three_prime_UTR | 50.0% | |
| !! | CAGGCTTCGGTTCTAAAGCT+TGG | - | chr1_4:58450578-58450597 | None:intergenic | 50.0% |
| ACGCGGATACACTCAACACT+TGG | + | chr1_4:58450602-58450621 | Msa0173290:three_prime_UTR | 50.0% | |
| !! | GGTTGCTTTAGGGCATAGCA+CGG | - | chr1_4:58451050-58451069 | None:intergenic | 50.0% |
| ! | CAGGAGTGACTTGCAAGGTT+TGG | + | chr1_4:58451139-58451158 | Msa0173290:three_prime_UTR | 50.0% |
| CGTATCTGCCGACCATACAA+CGG | + | chr1_4:58451333-58451352 | Msa0173290:three_prime_UTR | 50.0% | |
| GGTCACTCTGCTTGCTTCTC+TGG | + | chr1_4:58447792-58447811 | Msa0173290:CDS | 55.0% | |
| ! | GCCTGTCTCTGACTTGTAGC+AGG | + | chr1_4:58449725-58449744 | Msa0173290:intron | 55.0% |
| ATCTACTCCGCCATCCAGGA+TGG | - | chr1_4:58449878-58449897 | None:intergenic | 55.0% | |
| !! | GCTTTAGAACCGAAGCCTGC+CGG | + | chr1_4:58450579-58450598 | Msa0173290:three_prime_UTR | 55.0% |
| GTGTTGAGTGTATCCGCGTC+CGG | - | chr1_4:58450601-58450620 | None:intergenic | 55.0% | |
| TCTTCACCAGGAGTCAGGGC+AGG | + | chr1_4:58449022-58449041 | Msa0173290:three_prime_UTR | 60.0% | |
| GGAGACGGTCGAGCAAGTAG+TGG | - | chr1_4:58451071-58451090 | None:intergenic | 60.0% | |
| ACACTAGGAGGGCCTGCAAG+TGG | + | chr1_4:58451167-58451186 | Msa0173290:three_prime_UTR | 60.0% | |
| GCATGACCTGCCCTGACTCC+TGG | - | chr1_4:58449031-58449050 | None:intergenic | 65.0% | |
| TATCCGCGTCCGGCAGGCTT+CGG | - | chr1_4:58450591-58450610 | None:intergenic | 65.0% | |
| TGAGTGTATCCGCGTCCGGC+AGG | - | chr1_4:58450597-58450616 | None:intergenic | 65.0% | |
| GAACCGAAGCCTGCCGGACG+CGG | + | chr1_4:58450585-58450604 | Msa0173290:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 58447445 | 58451494 | 58447445 | ID=Msa0173290;Name=Msa0173290 |
| chr1_4 | mRNA | 58447445 | 58451494 | 58447445 | ID=Msa0173290-mRNA-1;Parent=Msa0173290;Name=Msa0173290-mRNA-1;_AED=0.10;_eAED=0.10;_QI=260|1|1|1|0.75|0.77|9|1962|85 |
| chr1_4 | exon | 58447445 | 58447835 | 58447445 | ID=Msa0173290-mRNA-1:exon:18124;Parent=Msa0173290-mRNA-1 |
| chr1_4 | exon | 58448299 | 58448829 | 58448299 | ID=Msa0173290-mRNA-1:exon:18125;Parent=Msa0173290-mRNA-1 |
| chr1_4 | exon | 58449007 | 58449072 | 58449007 | ID=Msa0173290-mRNA-1:exon:18126;Parent=Msa0173290-mRNA-1 |
| chr1_4 | exon | 58449448 | 58449614 | 58449448 | ID=Msa0173290-mRNA-1:exon:18127;Parent=Msa0173290-mRNA-1 |
| chr1_4 | exon | 58449747 | 58449906 | 58449747 | ID=Msa0173290-mRNA-1:exon:18128;Parent=Msa0173290-mRNA-1 |
| chr1_4 | exon | 58450060 | 58450153 | 58450060 | ID=Msa0173290-mRNA-1:exon:18129;Parent=Msa0173290-mRNA-1 |
| chr1_4 | exon | 58450223 | 58450623 | 58450223 | ID=Msa0173290-mRNA-1:exon:18130;Parent=Msa0173290-mRNA-1 |
| chr1_4 | exon | 58450735 | 58450839 | 58450735 | ID=Msa0173290-mRNA-1:exon:18131;Parent=Msa0173290-mRNA-1 |
| chr1_4 | exon | 58450930 | 58451494 | 58450930 | ID=Msa0173290-mRNA-1:exon:18132;Parent=Msa0173290-mRNA-1 |
| chr1_4 | five_prime_UTR | 58447445 | 58447704 | 58447445 | ID=Msa0173290-mRNA-1:five_prime_utr;Parent=Msa0173290-mRNA-1 |
| chr1_4 | CDS | 58447705 | 58447835 | 58447705 | ID=Msa0173290-mRNA-1:cds;Parent=Msa0173290-mRNA-1 |
| chr1_4 | CDS | 58448299 | 58448425 | 58448299 | ID=Msa0173290-mRNA-1:cds;Parent=Msa0173290-mRNA-1 |
| chr1_4 | three_prime_UTR | 58448426 | 58448829 | 58448426 | ID=Msa0173290-mRNA-1:three_prime_utr;Parent=Msa0173290-mRNA-1 |
| chr1_4 | three_prime_UTR | 58449007 | 58449072 | 58449007 | ID=Msa0173290-mRNA-1:three_prime_utr;Parent=Msa0173290-mRNA-1 |
| chr1_4 | three_prime_UTR | 58449448 | 58449614 | 58449448 | ID=Msa0173290-mRNA-1:three_prime_utr;Parent=Msa0173290-mRNA-1 |
| chr1_4 | three_prime_UTR | 58449747 | 58449906 | 58449747 | ID=Msa0173290-mRNA-1:three_prime_utr;Parent=Msa0173290-mRNA-1 |
| chr1_4 | three_prime_UTR | 58450060 | 58450153 | 58450060 | ID=Msa0173290-mRNA-1:three_prime_utr;Parent=Msa0173290-mRNA-1 |
| chr1_4 | three_prime_UTR | 58450223 | 58450623 | 58450223 | ID=Msa0173290-mRNA-1:three_prime_utr;Parent=Msa0173290-mRNA-1 |
| chr1_4 | three_prime_UTR | 58450735 | 58450839 | 58450735 | ID=Msa0173290-mRNA-1:three_prime_utr;Parent=Msa0173290-mRNA-1 |
| chr1_4 | three_prime_UTR | 58450930 | 58451494 | 58450930 | ID=Msa0173290-mRNA-1:three_prime_utr;Parent=Msa0173290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
