AlfalfaGEDB | Msa0837350

M. sativa cultivar zhongmu-4 / Msa0837350

KEGG: K10579
GO: GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0016740 GO:0019538 GO:0019787 GO:0019788 GO:0032446 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045116 GO:0050896 GO:0070647 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00179.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0837350	AES94883.1	100.000	183	0	0	1	183	4	186	2.13e-134	383

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0837350	sp\|Q9SDY5\|RCE1_ARATH	85.870	184	25	1	1	183	1	184	1.88e-119	338

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0837350	G7KC51	100.000	183	0	0	1	183	4	186	1.02e-134	383

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000550	Msa0837350	0.800206	1.606744e-48	-8.615850e-47
Msa0013050	Msa0837350	0.816867	4.430772e-52	-8.615850e-47
Msa0024210	Msa0837350	0.839695	1.358556e-57	-8.615850e-47
Msa0029540	Msa0837350	0.816906	4.342260e-52	-8.615850e-47
Msa0036130	Msa0837350	-0.800684	1.284068e-48	-8.615850e-47
Msa0073700	Msa0837350	-0.804958	1.682536e-49	-8.615850e-47
Msa0120010	Msa0837350	0.846138	2.621042e-59	-8.615850e-47
Msa0120020	Msa0837350	0.850467	1.666295e-60	-8.615850e-47
Msa0120040	Msa0837350	0.802015	6.856476e-49	-8.615850e-47
Msa0619470	Msa0837350	-0.808995	2.355116e-50	-8.615850e-47
Msa0684180	Msa0837350	0.803627	3.185116e-49	-8.615850e-47
Msa0757450	Msa0837350	0.928305	3.481962e-92	-8.615850e-47
Msa0757500	Msa0837350	0.914165	2.637759e-84	-8.615850e-47
Msa0757520	Msa0837350	0.841557	4.422065e-58	-8.615850e-47
Msa0777570	Msa0837350	0.826647	2.418563e-54	-8.615850e-47
Msa0798810	Msa0837350	0.870680	1.215002e-66	-8.615850e-47
Msa0814630	Msa0837350	0.805413	1.351319e-49	-8.615850e-47
Msa0837350	Msa0855160	0.801957	7.047055e-49	-8.615850e-47
Msa0837350	Msa0862800	0.813882	2.043308e-51	-8.615850e-47
Msa0837350	Msa1004900	0.804309	2.297685e-49	-8.615850e-47
Msa0837350	Msa1008060	0.811257	7.665642e-51	-8.615850e-47
Msa0837350	Msa1022970	-0.810069	1.384553e-50	-8.615850e-47
Msa0837350	Msa1049510	0.803707	3.065238e-49	-8.615850e-47
Msa0837350	Msa1126120	0.808903	2.464268e-50	-8.615850e-47
Msa0837350	Msa1130270	0.800668	1.293562e-48	-8.615850e-47
Msa0837350	Msa1169550	-0.805160	1.526460e-49	-8.615850e-47
Msa0837350	Msa1207470	0.803562	3.284841e-49	-8.615850e-47
Msa0837350	Msa1217430	0.813435	2.562964e-51	-8.615850e-47
Msa0837350	Msa1259490	0.806676	7.327948e-50	-8.615850e-47
Msa0837350	Msa1296460	0.824570	7.513306e-54	-8.615850e-47
Msa0837350	Msa1299180	0.825856	3.730811e-54	-8.615850e-47
Msa0138970	Msa0837350	0.816453	5.487279e-52	-8.615850e-47
Msa0158130	Msa0837350	0.806231	9.093765e-50	-8.615850e-47
Msa0215320	Msa0837350	0.810335	1.213432e-50	-8.615850e-47
Msa0419640	Msa0837350	0.803692	3.087458e-49	-8.615850e-47
Msa0421780	Msa0837350	0.804299	2.308814e-49	-8.615850e-47
Msa0467960	Msa0837350	0.802874	4.561483e-49	-8.615850e-47
Msa0241800	Msa0837350	-0.804864	1.760400e-49	-8.615850e-47
Msa0294560	Msa0837350	0.858356	8.712304e-63	-8.615850e-47
Msa0302580	Msa0837350	0.800130	1.664628e-48	-8.615850e-47
Msa0553220	Msa0837350	0.808011	3.819118e-50	-8.615850e-47
Msa0574760	Msa0837350	0.810453	1.144095e-50	-8.615850e-47
Msa0592440	Msa0837350	-0.802057	6.721269e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0837350	MtrunA17_Chr5g0403591	100.000	183	0	0	1	183	1	183	2.40e-138	383
Msa0837350	MtrunA17_Chr4g0037011	38.971	136	80	2	33	166	5	139	1.82e-28	103
Msa0837350	MtrunA17_Chr1g0154011	36.765	136	83	2	33	166	5	139	4.06e-27	100
Msa0837350	MtrunA17_Chr5g0432831	36.765	136	83	2	33	166	5	139	2.48e-26	98.2
Msa0837350	MtrunA17_Chr3g0108261	36.765	136	83	2	33	166	5	139	2.64e-26	98.2
Msa0837350	MtrunA17_Chr7g0275361	36.029	136	84	2	33	166	5	139	5.68e-26	97.1
Msa0837350	MtrunA17_Chr8g0369311	35.766	137	83	3	33	166	61	195	2.94e-25	97.1
Msa0837350	MtrunA17_Chr2g0316201	40.000	105	62	1	54	157	30	134	1.39e-21	85.9
Msa0837350	MtrunA17_Chr2g0316211	40.000	105	62	1	54	157	30	134	2.09e-21	85.5
Msa0837350	MtrunA17_Chr4g0060351	27.778	144	103	1	33	175	8	151	5.21e-21	84.3
Msa0837350	MtrunA17_Chr8g0362321	26.389	144	105	1	33	175	8	151	2.27e-20	82.8
Msa0837350	MtrunA17_Chr4g0038891	32.090	134	87	2	33	162	36	169	4.57e-18	77.4
Msa0837350	MtrunA17_Chr5g0396451	38.824	85	52	0	69	153	73	157	6.61e-18	77.0
Msa0837350	MtrunA17_Chr3g0139901	30.075	133	89	3	29	157	3	135	1.12e-17	75.9
Msa0837350	MtrunA17_Chr1g0199951	33.962	106	70	0	51	156	65	170	2.97e-17	75.5
Msa0837350	MtrunA17_Chr4g0059291	33.043	115	74	3	56	167	27	141	6.59e-17	74.7
Msa0837350	MtrunA17_Chr4g0031181	30.833	120	70	1	63	169	40	159	1.13e-15	70.9
Msa0837350	MtrunA17_Chr8g0348701	34.615	104	64	4	67	167	39	141	9.64e-15	68.9
Msa0837350	MtrunA17_Chr8g0387131	25.850	147	98	3	23	167	4	141	1.79e-14	68.2
Msa0837350	MtrunA17_Chr3g0131871	32.743	113	74	2	56	166	30	142	2.28e-14	68.2
Msa0837350	MtrunA17_Chr2g0328001	30.000	120	71	1	63	169	40	159	4.35e-14	66.6
Msa0837350	MtrunA17_Chr4g0053191	29.915	117	79	2	53	166	33	149	1.95e-13	64.7
Msa0837350	MtrunA17_Chr8g0378601	30.709	127	82	3	23	147	16	138	3.78e-13	64.3
Msa0837350	MtrunA17_Chr7g0254701	33.684	95	63	0	72	166	54	148	1.15e-12	64.3
Msa0837350	MtrunA17_Chr5g0401831	28.571	119	82	2	52	167	32	150	1.26e-12	62.8
Msa0837350	MtrunA17_Chr2g0313441	87.500	32	4	0	5	36	23	54	2.99e-12	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0837350	AT4G36800.2	85.870	184	25	1	1	183	1	184	1.91e-120	338
Msa0837350	AT4G36800.1	85.870	184	25	1	1	183	1	184	1.91e-120	338
Msa0837350	AT2G18600.1	83.243	185	29	1	1	183	1	185	1.67e-113	320
Msa0837350	AT2G18600.2	83.243	185	29	1	1	183	1	185	1.67e-113	320
Msa0837350	AT5G56150.1	36.029	136	84	2	33	166	5	139	1.12e-26	99.4
Msa0837350	AT3G08690.2	37.500	136	82	2	33	166	5	139	3.14e-26	98.2
Msa0837350	AT3G08690.1	37.500	136	82	2	33	166	5	139	3.14e-26	98.2
Msa0837350	AT4G27960.1	36.765	136	83	2	33	166	5	139	3.35e-26	98.2
Msa0837350	AT2G16740.1	36.765	136	83	2	33	166	5	139	3.50e-26	98.2
Msa0837350	AT5G41700.4	35.294	136	86	1	33	166	5	140	3.91e-26	97.8
Msa0837350	AT1G64230.2	36.029	136	84	2	33	166	5	139	5.62e-26	97.4
Msa0837350	AT1G64230.1	36.029	136	84	2	33	166	5	139	5.62e-26	97.4
Msa0837350	AT5G53300.2	36.029	136	84	2	33	166	5	139	9.93e-26	97.1
Msa0837350	AT5G53300.4	36.029	136	84	2	33	166	5	139	9.93e-26	97.1
Msa0837350	AT5G53300.1	36.029	136	84	2	33	166	5	139	9.93e-26	97.1
Msa0837350	AT4G27960.2	36.765	136	83	2	33	166	35	169	1.83e-25	97.1
Msa0837350	AT1G64230.3	34.028	144	85	2	33	166	5	148	2.91e-25	95.9
Msa0837350	AT5G41700.5	35.294	136	85	2	33	166	5	139	6.46e-25	94.7
Msa0837350	AT5G41700.2	35.294	136	85	2	33	166	5	139	6.46e-25	94.7
Msa0837350	AT5G41700.1	35.294	136	85	2	33	166	5	139	6.46e-25	94.7
Msa0837350	AT3G08700.2	34.783	138	86	3	33	167	5	141	1.20e-24	94.0
Msa0837350	AT3G08700.1	34.783	138	86	3	33	167	5	141	1.20e-24	94.0
Msa0837350	AT1G64230.5	38.393	112	68	1	56	166	70	181	2.72e-24	94.4
Msa0837350	AT1G64230.4	38.393	112	68	1	56	166	70	181	2.72e-24	94.4
Msa0837350	AT5G56150.2	39.815	108	61	3	33	138	5	110	1.34e-21	85.1
Msa0837350	AT1G78870.2	40.000	105	62	1	54	157	30	134	2.18e-21	85.9
Msa0837350	AT1G16890.2	39.048	105	63	1	54	157	30	134	7.45e-21	84.3
Msa0837350	AT1G16890.3	39.048	105	63	1	54	157	39	143	1.20e-20	84.3
Msa0837350	AT1G16890.1	41.837	98	56	1	61	157	4	101	1.50e-20	82.8
Msa0837350	AT1G78870.4	41.837	98	56	1	61	157	4	101	1.65e-20	82.8
Msa0837350	AT2G02760.1	27.083	144	104	1	33	175	8	151	1.73e-20	83.6
Msa0837350	AT2G02760.2	27.083	144	104	1	33	175	8	151	1.73e-20	83.6
Msa0837350	AT2G02760.4	27.083	144	104	1	33	175	8	151	1.73e-20	83.6
Msa0837350	AT2G02760.3	27.083	144	104	1	33	175	8	151	1.73e-20	83.6
Msa0837350	AT1G14400.1	27.083	144	104	1	33	175	8	151	6.48e-20	82.0
Msa0837350	AT1G14400.2	27.083	144	104	1	33	175	8	151	6.48e-20	82.0
Msa0837350	AT5G53300.3	37.500	104	62	2	33	134	5	107	6.25e-19	78.2
Msa0837350	AT1G78870.1	41.414	99	56	2	61	157	4	102	9.39e-19	78.2
Msa0837350	AT5G62540.1	27.273	143	103	1	33	174	8	150	1.67e-18	78.2
Msa0837350	AT3G20060.2	37.500	88	55	0	69	156	32	119	6.22e-18	76.3
Msa0837350	AT3G20060.1	37.500	88	55	0	69	156	77	164	9.82e-18	77.0
Msa0837350	AT3G13550.1	32.061	131	86	2	17	145	24	153	1.02e-17	77.0
Msa0837350	AT3G13550.2	32.540	126	82	2	17	140	24	148	1.20e-17	76.6
Msa0837350	AT5G41700.3	38.384	99	58	2	33	129	5	102	1.51e-17	75.5
Msa0837350	AT5G25760.1	30.827	133	88	3	29	157	3	135	1.66e-17	75.9
Msa0837350	AT5G25760.2	30.827	133	88	3	29	157	3	135	1.66e-17	75.9
Msa0837350	AT1G36340.2	34.821	112	72	1	56	166	34	145	2.25e-17	75.5
Msa0837350	AT1G36340.1	34.821	112	72	1	56	166	34	145	2.25e-17	75.5
Msa0837350	AT5G41340.1	38.462	104	60	4	67	167	39	141	1.10e-16	74.3
Msa0837350	AT1G50490.1	36.364	88	56	0	69	156	76	163	1.12e-16	74.3
Msa0837350	AT1G63800.1	37.500	104	61	4	67	167	39	141	1.80e-16	73.9
Msa0837350	AT1G63800.2	37.500	104	61	4	67	167	24	126	2.39e-16	73.2
Msa0837350	AT5G41340.2	36.000	100	62	2	70	167	7	106	5.28e-16	71.6
Msa0837350	AT1G78870.3	43.590	78	43	1	54	130	30	107	5.67e-16	70.5
Msa0837350	AT3G24515.1	33.607	122	73	2	53	166	36	157	1.00e-15	74.3
Msa0837350	AT5G50870.1	35.417	96	61	1	72	166	47	142	1.13e-15	72.0
Msa0837350	AT2G46030.5	34.783	115	72	3	56	167	27	141	3.24e-15	70.5
Msa0837350	AT2G46030.1	34.783	115	72	3	56	167	27	141	3.24e-15	70.5
Msa0837350	AT3G24515.3	35.577	104	63	1	67	166	79	182	4.84e-15	72.4
Msa0837350	AT2G46030.4	34.783	115	72	3	56	167	30	144	6.02e-15	69.7
Msa0837350	AT2G46030.2	34.783	115	72	3	56	167	30	144	6.02e-15	69.7
Msa0837350	AT2G46030.3	35.088	114	71	3	56	166	99	212	7.35e-15	70.9
Msa0837350	AT5G50870.2	38.667	75	45	1	72	145	47	121	5.05e-14	67.8
Msa0837350	AT3G57870.1	30.769	117	78	2	53	166	34	150	8.80e-14	66.2
Msa0837350	AT5G59300.1	29.167	120	72	1	63	169	40	159	4.92e-13	64.3
Msa0837350	AT3G55380.1	29.412	119	71	1	64	169	42	160	5.07e-13	64.3
Msa0837350	AT3G46460.1	28.333	120	73	1	63	169	40	159	5.87e-13	63.9
Msa0837350	AT5G05080.2	33.684	95	63	0	72	166	54	148	8.94e-13	65.1
Msa0837350	AT5G05080.3	33.684	95	63	0	72	166	54	148	8.94e-13	65.1
Msa0837350	AT5G05080.1	33.684	95	63	0	72	166	54	148	8.94e-13	65.1
Msa0837350	AT5G05080.4	33.684	95	63	0	72	166	54	148	8.94e-13	65.1
Msa0837350	AT3G46460.3	27.523	109	66	1	74	169	9	117	8.33e-11	57.4
Msa0837350	AT3G46460.2	27.523	109	66	1	74	169	9	117	8.33e-11	57.4

Find 65 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCCTTCCAAGTCAATATT+TGG	0.142980	5_4:-11345961	None:intergenic
TATTCTAAACAATCAGAAAA+TGG	0.229500	5_4:+11346516	Msa0837350:three_prime_UTR
TTCAGGGGATCCTCGTAATT+TGG	0.241596	5_4:-11346165	None:intergenic
CAGCAGCGGCATCATGATTC+AGG	0.258270	5_4:-11346182	None:intergenic
ACATTAGATTCAAACATCTT+TGG	0.268686	5_4:-11346219	None:intergenic
GATGTAACTTATGTGCTTTA+TGG	0.270626	5_4:+11346480	Msa0837350:three_prime_UTR
CCAGCACTTTGCTTCTTAAC+AGG	0.282485	5_4:-11343702	None:intergenic
AGATGACAGTGTTTATATTA+AGG	0.283684	5_4:-11346023	None:intergenic
CTTAACAGGTACTCCATTAC+TGG	0.300967	5_4:-11343688	None:intergenic
TAGATGCGTTTGGTGGTCTA+AGG	0.327340	5_4:-11346435	None:intergenic
ACATCAACATTCCAATTGTT+TGG	0.337427	5_4:-11346462	None:intergenic
AATATAAACACTGTCATCTA+TGG	0.349971	5_4:+11346027	Msa0837350:CDS
TTCAATCTTCTCAATCAATC+AGG	0.362380	5_4:+11342742	Msa0837350:five_prime_UTR
TTTGTCTTGCACTTCACCTT+GGG	0.370105	5_4:-11345813	None:intergenic
TTTCTTGGTGGAGGAGCATC+AGG	0.389923	5_4:+11346406	Msa0837350:three_prime_UTR
GGGTGCTTCATGTGGATAGA+TGG	0.399776	5_4:-11345793	None:intergenic
GGCAATGTCTGGTGGGTATG+TGG	0.402485	5_4:+11346248	Msa0837350:CDS
CTTTGTCTTGCACTTCACCT+TGG	0.407733	5_4:-11345814	None:intergenic
CATCAGGTCATCTTTGCCAT+TGG	0.416464	5_4:-11345449	None:intergenic
ATCAGGTCATCTTTGCCATT+GGG	0.429309	5_4:-11345448	None:intergenic
GCATCTAAAAGCCAAACAAT+TGG	0.433067	5_4:+11346451	Msa0837350:three_prime_UTR
CATTGATAATATATTTCAAA+GGG	0.446769	5_4:-11346323	None:intergenic
TCAAAACTTCGAAGTTCATC+AGG	0.454455	5_4:-11345465	None:intergenic
AATTGCATGGTGCAAGACTT+TGG	0.456157	5_4:-11345424	None:intergenic
ATTCTAAACAATCAGAAAAT+GGG	0.468228	5_4:+11346517	Msa0837350:three_prime_UTR
TACAAGTAATATCCATCATC+GGG	0.483744	5_4:-11345493	None:intergenic
GAGCATGGTTTACATACAGC+GGG	0.483927	5_4:-11346286	None:intergenic
GATTAAACTATTTAAAGTAA+AGG	0.497569	5_4:+11343638	Msa0837350:CDS
TTCACCTTGGGTGCTTCATG+TGG	0.501905	5_4:-11345801	None:intergenic
CATCCAAATATTGACTTGGA+AGG	0.507990	5_4:+11345958	Msa0837350:CDS
GCAATGTCTGGTGGGTATGT+GGG	0.513890	5_4:+11346249	Msa0837350:CDS
ACAGTGTTTATATTAAGGAC+AGG	0.514717	5_4:-11346018	None:intergenic
GCATTGATAATATATTTCAA+AGG	0.517847	5_4:-11346324	None:intergenic
TCAACATCTTAAGAGAAGAC+TGG	0.523814	5_4:+11345992	Msa0837350:CDS
GGCATGGAAGTTGTTGAGCA+TGG	0.530108	5_4:-11346301	None:intergenic
TTACAAGTAATATCCATCAT+CGG	0.536160	5_4:-11345494	None:intergenic
TGGCTTGTATCATCTCTTCA+CGG	0.539377	5_4:+11346047	Msa0837350:CDS
AGCAGCGGCATCATGATTCA+GGG	0.539634	5_4:-11346181	None:intergenic
CTACCATCCAAATATTGACT+TGG	0.541780	5_4:+11345954	Msa0837350:CDS
ATAGATGGGAGACACATTGA+AGG	0.544925	5_4:-11345778	None:intergenic
AAATATATTATCAATGCCCA+TGG	0.546894	5_4:+11346330	Msa0837350:three_prime_UTR
CTTCCAAGTCAATATTTGGA+TGG	0.548559	5_4:-11345957	None:intergenic
CAAGCTGAAAATGCCAGTAA+TGG	0.548896	5_4:+11343675	Msa0837350:CDS
TAATATATTTCAAAGGGGCA+TGG	0.550516	5_4:-11346317	None:intergenic
TTTGCCATTGGGAAATTGCA+TGG	0.574210	5_4:-11345437	None:intergenic
CCTGTTAAGAAGCAAAGTGC+TGG	0.575364	5_4:+11343702	Msa0837350:CDS
AATGTGAGGAGGGCAATGTC+TGG	0.586922	5_4:+11346237	Msa0837350:CDS
GGTGCTTCATGTGGATAGAT+GGG	0.590678	5_4:-11345792	None:intergenic
GTGAGGAGGGCAATGTCTGG+TGG	0.597624	5_4:+11346240	Msa0837350:CDS
GTTTGAATCTAATGTGAGGA+GGG	0.602029	5_4:+11346227	Msa0837350:CDS
TGCACCATGCAATTTCCCAA+TGG	0.605830	5_4:+11345433	Msa0837350:CDS
CTATCCACATGAAGCACCCA+AGG	0.621344	5_4:+11345797	Msa0837350:CDS
CAATCAGAAAATGGGTTCAG+CGG	0.622698	5_4:+11346525	Msa0837350:three_prime_UTR
GGCGAGTTGCGTCTTCACAA+AGG	0.628980	5_4:+11343723	Msa0837350:CDS
TGAGGAGGGCAATGTCTGGT+GGG	0.629398	5_4:+11346241	Msa0837350:CDS
CAAGGTGAAGTGCAAGACAA+AGG	0.630470	5_4:+11345815	Msa0837350:CDS
TGTTTGAATCTAATGTGAGG+AGG	0.637414	5_4:+11346226	Msa0837350:CDS
GCAGCGGCATCATGATTCAG+GGG	0.671229	5_4:-11346180	None:intergenic
TGAGCATGGTTTACATACAG+CGG	0.671953	5_4:-11346287	None:intergenic
GCATGGTTTACATACAGCGG+GGG	0.678401	5_4:-11346284	None:intergenic
AGATGTTTGAATCTAATGTG+AGG	0.682109	5_4:+11346223	Msa0837350:CDS
ATTGATAATATATTTCAAAG+GGG	0.684229	5_4:-11346322	None:intergenic
TGTGCAGGAGCCAAATTACG+AGG	0.709133	5_4:+11346155	Msa0837350:intron
ATTATCTCTCAAGACAGCAG+CGG	0.713092	5_4:-11346196	None:intergenic
AGCATGGTTTACATACAGCG+GGG	0.717629	5_4:-11346285	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGAAAGAAATATATAAATA+GGG	-	chr5_4:11344333-11344352	None:intergenic	10.0%
!!	AAAGAAAGAAATATATAAAT+AGG	-	chr5_4:11344334-11344353	None:intergenic	10.0%
!!!	ATGTTGTTTTATTATTTTTT+CGG	+	chr5_4:11344660-11344679	Msa0837350:intron	10.0%
!!	TAAAGGTAAATTATGAATTA+GGG	-	chr5_4:11342879-11342898	None:intergenic	15.0%
!!	ATAAAGGTAAATTATGAATT+AGG	-	chr5_4:11342880-11342899	None:intergenic	15.0%
!!	TTTGATATCATTATTCATTA+TGG	+	chr5_4:11343120-11343139	Msa0837350:intron	15.0%
!!	TTGATATCATTATTCATTAT+GGG	+	chr5_4:11343121-11343140	Msa0837350:intron	15.0%
!!!	GATTAAACTATTTAAAGTAA+AGG	+	chr5_4:11343638-11343657	Msa0837350:CDS	15.0%
!!	AAGTAAACAATTTAATAAGA+AGG	-	chr5_4:11343752-11343771	None:intergenic	15.0%
!!	ATATTTGTGTAATTTATTTC+TGG	-	chr5_4:11343966-11343985	None:intergenic	15.0%
!!	AATAAATTACACAAATATCT+TGG	+	chr5_4:11343968-11343987	Msa0837350:intron	15.0%
!!	AATCACTAATAAAATTACTA+AGG	-	chr5_4:11345134-11345153	None:intergenic	15.0%
!!	AAAATAACAAAAAGATAAAG+TGG	-	chr5_4:11345528-11345547	None:intergenic	15.0%
!!!	AAAATTGATTCTTGTTTTTA+AGG	+	chr5_4:11345567-11345586	Msa0837350:intron	15.0%
!!!	TTTATATCATGTTATTTGTT+TGG	+	chr5_4:11345611-11345630	Msa0837350:intron	15.0%
!!!	ATTGATAATATATTTCAAAG+GGG	-	chr5_4:11346325-11346344	None:intergenic	15.0%
!!!	CATTGATAATATATTTCAAA+GGG	-	chr5_4:11346326-11346345	None:intergenic	15.0%
!!!	AAATAAATTTTACAAACCAT+GGG	-	chr5_4:11346349-11346368	None:intergenic	15.0%
!!	TCAATAAAAAAAAACTAGCT+AGG	-	chr5_4:11343179-11343198	None:intergenic	20.0%
!!!	ATATTTGTTGCTTTTGAAAA+AGG	+	chr5_4:11343207-11343226	Msa0837350:intron	20.0%
!!!	AGCTACTTTTTTTTTTCTTA+AGG	+	chr5_4:11343299-11343318	Msa0837350:intron	20.0%
!!!	GCTACTTTTTTTTTTCTTAA+GGG	+	chr5_4:11343300-11343319	Msa0837350:intron	20.0%
!!!	CTAAACATACAATTTTTTGT+TGG	+	chr5_4:11343466-11343485	Msa0837350:intron	20.0%
!!!	TTTTTGTTGTTCTTATTGAA+AGG	+	chr5_4:11343525-11343544	Msa0837350:intron	20.0%
!!!	TAGAAGTTTTTACTTGATAT+AGG	+	chr5_4:11344043-11344062	Msa0837350:intron	20.0%
!!	ATAATCTACATAATGTAGTT+AGG	+	chr5_4:11344081-11344100	Msa0837350:intron	20.0%
!!	ATATATAAATAGGGATGAAA+AGG	-	chr5_4:11344324-11344343	None:intergenic	20.0%
!!!	ATTTTATGCAATGTTATTAG+AGG	-	chr5_4:11344614-11344633	None:intergenic	20.0%
!!	TTGCATAAAATGAGTAAAAT+TGG	+	chr5_4:11344623-11344642	Msa0837350:intron	20.0%
!!	TTAAATATTGTGTATTCTCA+CGG	+	chr5_4:11344864-11344883	Msa0837350:intron	20.0%
!!	AACAGAAGAAAATCAAATAT+AGG	-	chr5_4:11344931-11344950	None:intergenic	20.0%
!!!	TATTAGTGATTTTTCATGAA+AGG	+	chr5_4:11345143-11345162	Msa0837350:intron	20.0%
!!	ACTTGTATAACAAAATAAAG+TGG	-	chr5_4:11345358-11345377	None:intergenic	20.0%
!!!	CAAGAATCAATTTTAAAGTT+AGG	-	chr5_4:11345561-11345580	None:intergenic	20.0%
!!	GCTAAATTAAATGTATAATC+TGG	+	chr5_4:11345653-11345672	Msa0837350:intron	20.0%
!!	TAAAACAGAATATGAAAACA+AGG	-	chr5_4:11345893-11345912	None:intergenic	20.0%
!!!	GCATTGATAATATATTTCAA+AGG	-	chr5_4:11346327-11346346	None:intergenic	20.0%
!!!	GAAATAAATTTTACAAACCA+TGG	-	chr5_4:11346350-11346369	None:intergenic	20.0%
!!	TATTCTAAACAATCAGAAAA+TGG	+	chr5_4:11346516-11346535	Msa0837350:three_prime_UTR	20.0%
!!	ATTCTAAACAATCAGAAAAT+GGG	+	chr5_4:11346517-11346536	Msa0837350:three_prime_UTR	20.0%
!	TTTCAATTAGAGAGAGATAA+AGG	-	chr5_4:11342896-11342915	None:intergenic	25.0%
!	TTGGATTAATGAACTAGATA+GGG	+	chr5_4:11343485-11343504	Msa0837350:intron	25.0%
!	TTCATTGTGTTAAATTTGTG+TGG	+	chr5_4:11343781-11343800	Msa0837350:intron	25.0%
!	CAAACCAAAACATATATCTT+CGG	-	chr5_4:11344010-11344029	None:intergenic	25.0%
!	AACTCTGGATATTTAATGAT+TGG	+	chr5_4:11344239-11344258	Msa0837350:intron	25.0%
!	TAAGACTCGATGAAAAATAA+AGG	-	chr5_4:11344279-11344298	None:intergenic	25.0%
!	TCTTGAATCAATTAACAATG+AGG	-	chr5_4:11344367-11344386	None:intergenic	25.0%
!	AAATGAGTAAAATTGGACAA+AGG	+	chr5_4:11344630-11344649	Msa0837350:intron	25.0%
!	TCATTCAACAATAAACTATC+TGG	-	chr5_4:11344836-11344855	None:intergenic	25.0%
!!!	TATTTGATTTTCTTCTGTTC+TGG	+	chr5_4:11344932-11344951	Msa0837350:intron	25.0%
!	AAAGAAAAAGAACAATCACA+TGG	-	chr5_4:11345032-11345051	None:intergenic	25.0%
!!	TGATTGTTCTTTTTCTTTCT+TGG	+	chr5_4:11345034-11345053	Msa0837350:intron	25.0%
!!	GATTGTTCTTTTTCTTTCTT+GGG	+	chr5_4:11345035-11345054	Msa0837350:intron	25.0%
!	AAGCCTTCATTAAATATACT+GGG	-	chr5_4:11345075-11345094	None:intergenic	25.0%
!	AAAGCCTTCATTAAATATAC+TGG	-	chr5_4:11345076-11345095	None:intergenic	25.0%
!	TGTATAACAAAATAAAGTGG+CGG	-	chr5_4:11345355-11345374	None:intergenic	25.0%
!	TTACAAGTAATATCCATCAT+CGG	-	chr5_4:11345497-11345516	None:intergenic	25.0%
!	AGATGACAGTGTTTATATTA+AGG	-	chr5_4:11346026-11346045	None:intergenic	25.0%
!	AATATAAACACTGTCATCTA+TGG	+	chr5_4:11346027-11346046	Msa0837350:CDS	25.0%
!!!	CTCTGTTTTTTAACATATCA+GGG	+	chr5_4:11346075-11346094	Msa0837350:intron	25.0%
!	ACATTAGATTCAAACATCTT+TGG	-	chr5_4:11346222-11346241	None:intergenic	25.0%
!	AAATATATTATCAATGCCCA+TGG	+	chr5_4:11346330-11346349	Msa0837350:three_prime_UTR	25.0%
	TTCAATCTTCTCAATCAATC+AGG	+	chr5_4:11342742-11342761	Msa0837350:five_prime_UTR	30.0%
	GTAAATTATGAATTAGGGTG+AGG	-	chr5_4:11342874-11342893	None:intergenic	30.0%
	ATGATATCAAAGAATCGACA+TGG	-	chr5_4:11343111-11343130	None:intergenic	30.0%
!	TGATTTTGCAAAAGCTATGT+AGG	+	chr5_4:11343387-11343406	Msa0837350:intron	30.0%
!	GATTTTGCAAAAGCTATGTA+GGG	+	chr5_4:11343388-11343407	Msa0837350:intron	30.0%
	TTGTATGTTTAGTATCACTG+CGG	-	chr5_4:11343458-11343477	None:intergenic	30.0%
	GTTGGATTAATGAACTAGAT+AGG	+	chr5_4:11343484-11343503	Msa0837350:intron	30.0%
	ATTAATGAACTAGATAGGGA+CGG	+	chr5_4:11343489-11343508	Msa0837350:intron	30.0%
!!!	TTGTAGATGTTGTTTTTGCT+TGG	+	chr5_4:11343551-11343570	Msa0837350:intron	30.0%
!	ACTACCGAAGATATATGTTT+TGG	+	chr5_4:11344003-11344022	Msa0837350:intron	30.0%
	AAATAAAGGAGGAAGAGAAT+GGG	-	chr5_4:11344265-11344284	None:intergenic	30.0%
	AAAATAAAGGAGGAAGAGAA+TGG	-	chr5_4:11344266-11344285	None:intergenic	30.0%
	TAAAATCCACCATAAGAGTA+TGG	-	chr5_4:11344566-11344585	None:intergenic	30.0%
!!!	ATACTCTTATGGTGGATTTT+AGG	+	chr5_4:11344565-11344584	Msa0837350:intron	30.0%
	TTTCCGTGAAAATTTACTGT+AGG	+	chr5_4:11344784-11344803	Msa0837350:intron	30.0%
	GGTTATCACTTAACAAGTAT+AGG	-	chr5_4:11344994-11345013	None:intergenic	30.0%
!	TACTTGTTAAGTGATAACCT+TGG	+	chr5_4:11344995-11345014	Msa0837350:intron	30.0%
!	ACTTGTTAAGTGATAACCTT+GGG	+	chr5_4:11344996-11345015	Msa0837350:intron	30.0%
	TCTCCCAGTATATTTAATGA+AGG	+	chr5_4:11345069-11345088	Msa0837350:intron	30.0%
!	AGGCTTTTTATCTTGAGAAT+TGG	+	chr5_4:11345089-11345108	Msa0837350:intron	30.0%
	ATGAAAGGAAACTTCTTTAG+TGG	+	chr5_4:11345158-11345177	Msa0837350:intron	30.0%
	TACATGTTTAAGCTGACTAA+TGG	-	chr5_4:11345205-11345224	None:intergenic	30.0%
	TACAAGTAATATCCATCATC+GGG	-	chr5_4:11345496-11345515	None:intergenic	30.0%
!!	GATGATGGATATTACTTGTA+AGG	+	chr5_4:11345496-11345515	Msa0837350:intron	30.0%
!!!	CAATTTTAAAGTTAGGCTAC+AGG	-	chr5_4:11345554-11345573	None:intergenic	30.0%
	CATGATATAAAGACAGCATA+GGG	-	chr5_4:11345602-11345621	None:intergenic	30.0%
	ACATGATATAAAGACAGCAT+AGG	-	chr5_4:11345603-11345622	None:intergenic	30.0%
!!!	CTGTTTTTTCGTCATTTTGA+GGG	-	chr5_4:11345698-11345717	None:intergenic	30.0%
!!!	TCTGTTTTTTCGTCATTTTG+AGG	-	chr5_4:11345699-11345718	None:intergenic	30.0%
	TGTAACAAAAAACAGCATAG+AGG	-	chr5_4:11345737-11345756	None:intergenic	30.0%
!!!	TATGCTGTTTTTTGTTACAG+AGG	+	chr5_4:11345738-11345757	Msa0837350:intron	30.0%
	TTAACTACAATTCATGCTTC+TGG	+	chr5_4:11345860-11345879	Msa0837350:intron	30.0%
	TAACTACAATTCATGCTTCT+GGG	+	chr5_4:11345861-11345880	Msa0837350:intron	30.0%
	GTATCATTATGTGTATATGC+AGG	+	chr5_4:11345930-11345949	Msa0837350:intron	30.0%
	TTTCCTTCCAAGTCAATATT+TGG	-	chr5_4:11345964-11345983	None:intergenic	30.0%
	ACAGTGTTTATATTAAGGAC+AGG	-	chr5_4:11346021-11346040	None:intergenic	30.0%
!!!	GCTCTGTTTTTTAACATATC+AGG	+	chr5_4:11346074-11346093	Msa0837350:intron	30.0%
!!	TCAGGGTTTTGATATTTGAA+CGG	+	chr5_4:11346092-11346111	Msa0837350:intron	30.0%
	AGATGTTTGAATCTAATGTG+AGG	+	chr5_4:11346223-11346242	Msa0837350:CDS	30.0%
	TAATATATTTCAAAGGGGCA+TGG	-	chr5_4:11346320-11346339	None:intergenic	30.0%
!!!	CGTCAGTATGTTATTTTTCT+TGG	+	chr5_4:11346391-11346410	Msa0837350:three_prime_UTR	30.0%
!!!	CAGTATGTTATTTTTCTTGG+TGG	+	chr5_4:11346394-11346413	Msa0837350:three_prime_UTR	30.0%
!!!	TATGTTATTTTTCTTGGTGG+AGG	+	chr5_4:11346397-11346416	Msa0837350:three_prime_UTR	30.0%
	ACATCAACATTCCAATTGTT+TGG	-	chr5_4:11346465-11346484	None:intergenic	30.0%
	GATGTAACTTATGTGCTTTA+TGG	+	chr5_4:11346480-11346499	Msa0837350:three_prime_UTR	30.0%
	AAAAACAGAAACCCTAGAAG+AGG	-	chr5_4:11342840-11342859	None:intergenic	35.0%
	ACAAGAATAAGATCGCGTTT+AGG	-	chr5_4:11343065-11343084	None:intergenic	35.0%
	CATTATGGGACAAAATTAGC+TGG	+	chr5_4:11343135-11343154	Msa0837350:intron	35.0%
	TGTATGTTTAGTATCACTGC+GGG	-	chr5_4:11343457-11343476	None:intergenic	35.0%
	TTAATGAACTAGATAGGGAC+GGG	+	chr5_4:11343490-11343509	Msa0837350:intron	35.0%
!	GATATGAAGTGTTCTAATGC+TGG	+	chr5_4:11343591-11343610	Msa0837350:intron	35.0%
!!!	CTGGTTGATGTTGTTTTTGT+AGG	+	chr5_4:11343610-11343629	Msa0837350:intron	35.0%
!!!	TTGCCATAGCAGGAATTTTT+TGG	+	chr5_4:11343882-11343901	Msa0837350:intron	35.0%
!!!	TGCCATAGCAGGAATTTTTT+GGG	+	chr5_4:11343883-11343902	Msa0837350:intron	35.0%
	GACTCGATGAAAAATAAAGG+AGG	-	chr5_4:11344276-11344295	None:intergenic	35.0%
!	GCTGCTAACAATGATACTTT+TGG	+	chr5_4:11344387-11344406	Msa0837350:intron	35.0%
!	ATGTTATTAGAGGATGATGG+TGG	-	chr5_4:11344604-11344623	None:intergenic	35.0%
	GCAATGTTATTAGAGGATGA+TGG	-	chr5_4:11344607-11344626	None:intergenic	35.0%
	ACAAGGTAGAGATAAGTGAA+TGG	+	chr5_4:11344700-11344719	Msa0837350:intron	35.0%
	AATGGAAAACCTTGAGATTG+TGG	+	chr5_4:11344718-11344737	Msa0837350:intron	35.0%
	TTCTTACTACCACAATCTCA+AGG	-	chr5_4:11344730-11344749	None:intergenic	35.0%
	TGTGGTAGTAAGAATGATCT+AGG	+	chr5_4:11344736-11344755	Msa0837350:intron	35.0%
	ATCTAGGAGTTGAATTAGCA+AGG	+	chr5_4:11344752-11344771	Msa0837350:intron	35.0%
!	GAGCCTACAGTAAATTTTCA+CGG	-	chr5_4:11344790-11344809	None:intergenic	35.0%
!!	ATAAGAGCATTCACACTTCA+CGG	-	chr5_4:11344961-11344980	None:intergenic	35.0%
	CTTGTTAAGTGATAACCTTG+GGG	+	chr5_4:11344997-11345016	Msa0837350:intron	35.0%
	TTGTTAAGTGATAACCTTGG+GGG	+	chr5_4:11344998-11345017	Msa0837350:intron	35.0%
!	TGTTCTTTTTCTTTCTTGGG+CGG	+	chr5_4:11345038-11345057	Msa0837350:intron	35.0%
	TCAAAACTTCGAAGTTCATC+AGG	-	chr5_4:11345468-11345487	None:intergenic	35.0%
	AACAAAAAACAGCATAGAGG+TGG	-	chr5_4:11345734-11345753	None:intergenic	35.0%
!	CTACCATCCAAATATTGACT+TGG	+	chr5_4:11345954-11345973	Msa0837350:CDS	35.0%
	CTTCCAAGTCAATATTTGGA+TGG	-	chr5_4:11345960-11345979	None:intergenic	35.0%
!!	CATCCAAATATTGACTTGGA+AGG	+	chr5_4:11345958-11345977	Msa0837350:CDS	35.0%
	TCAACATCTTAAGAGAAGAC+TGG	+	chr5_4:11345992-11346011	Msa0837350:CDS	35.0%
!!	CAGGGTTTTGATATTTGAAC+GGG	+	chr5_4:11346093-11346112	Msa0837350:intron	35.0%
!!	AGGGTTTTGATATTTGAACG+GGG	+	chr5_4:11346094-11346113	Msa0837350:intron	35.0%
	ACGGGGATACTTGAAATTTA+TGG	+	chr5_4:11346111-11346130	Msa0837350:intron	35.0%
!	ATCTGTTACTTATTGTGTGC+AGG	+	chr5_4:11346140-11346159	Msa0837350:intron	35.0%
	TGTTTGAATCTAATGTGAGG+AGG	+	chr5_4:11346226-11346245	Msa0837350:CDS	35.0%
	GTTTGAATCTAATGTGAGGA+GGG	+	chr5_4:11346227-11346246	Msa0837350:CDS	35.0%
	GCATCTAAAAGCCAAACAAT+TGG	+	chr5_4:11346451-11346470	Msa0837350:three_prime_UTR	35.0%
	GAGATCGATAATTGAGAGAG+AGG	-	chr5_4:11342807-11342826	None:intergenic	40.0%
	AGAAACCCTAGAAGAGGAAA+GGG	-	chr5_4:11342834-11342853	None:intergenic	40.0%
	GAAGTTCTACGATTAGATCG+CGG	+	chr5_4:11342997-11343016	Msa0837350:intron	40.0%
!	CTGAGTTTGAGTTCAATGTC+TGG	-	chr5_4:11343356-11343375	None:intergenic	40.0%
	CAGACATTGAACTCAAACTC+AGG	+	chr5_4:11343354-11343373	Msa0837350:intron	40.0%
	CAAGCTGAAAATGCCAGTAA+TGG	+	chr5_4:11343675-11343694	Msa0837350:CDS	40.0%
	CTTAACAGGTACTCCATTAC+TGG	-	chr5_4:11343691-11343710	None:intergenic	40.0%
	GATTCAAGTATTCTGGCCAT+GGG	-	chr5_4:11343819-11343838	None:intergenic	40.0%
	CCAGAATACTTGAATCGAGA+GGG	+	chr5_4:11343823-11343842	Msa0837350:intron	40.0%
	ATACTTGAATCGAGAGGGAA+AGG	+	chr5_4:11343828-11343847	Msa0837350:intron	40.0%
	GAGGGAAAGGTGAACAATAA+AGG	+	chr5_4:11343841-11343860	Msa0837350:intron	40.0%
	TAATGTGTAGTTGCCATAGC+AGG	+	chr5_4:11343872-11343891	Msa0837350:intron	40.0%
!!!	GCCATAGCAGGAATTTTTTG+GGG	+	chr5_4:11343884-11343903	Msa0837350:intron	40.0%
!!!	CCATAGCAGGAATTTTTTGG+GGG	+	chr5_4:11343885-11343904	Msa0837350:intron	40.0%
	TTTCTGGATTTCATTCTCGC+TGG	-	chr5_4:11343950-11343969	None:intergenic	40.0%
	CAATTGCAGGAGATGATTGT+GGG	-	chr5_4:11344184-11344203	None:intergenic	40.0%
	ACAATTGCAGGAGATGATTG+TGG	-	chr5_4:11344185-11344204	None:intergenic	40.0%
	ACAATCATCTCCTGCAATTG+TGG	+	chr5_4:11344184-11344203	Msa0837350:intron	40.0%
	ATCCAGAGTTTACTGAAGAC+TGG	-	chr5_4:11344229-11344248	None:intergenic	40.0%
!!	AGAAGCATGGAGGTTTTCAT+AGG	-	chr5_4:11344520-11344539	None:intergenic	40.0%
!	AGCTTATAGTAGAAGCATGG+AGG	-	chr5_4:11344530-11344549	None:intergenic	40.0%
	TGCAGCTTATAGTAGAAGCA+TGG	-	chr5_4:11344533-11344552	None:intergenic	40.0%
	TGTCATCTGCCATACTCTTA+TGG	+	chr5_4:11344554-11344573	Msa0837350:intron	40.0%
	ATGAGACGCAGAAAGAAACA+AGG	+	chr5_4:11344683-11344702	Msa0837350:intron	40.0%
	AGTGTGAATGCTCTTATGCT+TGG	+	chr5_4:11344964-11344983	Msa0837350:intron	40.0%
	TGAAGAGTTACAAGCTCACT+AGG	+	chr5_4:11345238-11345257	Msa0837350:intron	40.0%
	AATTGCATGGTGCAAGACTT+TGG	-	chr5_4:11345427-11345446	None:intergenic	40.0%
	TTTGCCATTGGGAAATTGCA+TGG	-	chr5_4:11345440-11345459	None:intergenic	40.0%
	ATCAGGTCATCTTTGCCATT+GGG	-	chr5_4:11345451-11345470	None:intergenic	40.0%
!!!	GCTGTTTTTTGTTACAGAGG+AGG	+	chr5_4:11345741-11345760	Msa0837350:intron	40.0%
	ATAGATGGGAGACACATTGA+AGG	-	chr5_4:11345781-11345800	None:intergenic	40.0%
	TTTGTCTTGCACTTCACCTT+GGG	-	chr5_4:11345816-11345835	None:intergenic	40.0%
!	TGGCTTGTATCATCTCTTCA+CGG	+	chr5_4:11346047-11346066	Msa0837350:CDS	40.0%
	TGTATCATCTCTTCACGGTA+TGG	+	chr5_4:11346052-11346071	Msa0837350:intron	40.0%
	ATTATCTCTCAAGACAGCAG+CGG	-	chr5_4:11346199-11346218	None:intergenic	40.0%
	TGAGCATGGTTTACATACAG+CGG	-	chr5_4:11346290-11346309	None:intergenic	40.0%
!!!	GTTTGGCTTTTAGATGCGTT+TGG	-	chr5_4:11346448-11346467	None:intergenic	40.0%
!	CAATCAGAAAATGGGTTCAG+CGG	+	chr5_4:11346525-11346544	Msa0837350:three_prime_UTR	40.0%
	GAATAGCGTGAGAGAAACGA+AGG	-	chr5_4:11342774-11342793	None:intergenic	45.0%
	TCTTTCCCCTTTCCTCTTCT+AGG	+	chr5_4:11342825-11342844	Msa0837350:intron	45.0%
	CTTTCCCCTTTCCTCTTCTA+GGG	+	chr5_4:11342826-11342845	Msa0837350:intron	45.0%
	GAAACCCTAGAAGAGGAAAG+GGG	-	chr5_4:11342833-11342852	None:intergenic	45.0%
	CAGAAACCCTAGAAGAGGAA+AGG	-	chr5_4:11342835-11342854	None:intergenic	45.0%
	CAACGCGTACGGAAAAACAA+AGG	-	chr5_4:11342978-11342997	None:intergenic	45.0%
	TCGTAGAACTTCAACGCGTA+CGG	-	chr5_4:11342989-11343008	None:intergenic	45.0%
!!	CGCGGTGCTTTTTGTTGAAT+CGG	+	chr5_4:11343015-11343034	Msa0837350:intron	45.0%
	GCAAAAGCTACGAAGCTGTT+TGG	+	chr5_4:11343242-11343261	Msa0837350:intron	45.0%
	GAAGCTGTTTGGTATCACGT+TGG	+	chr5_4:11343253-11343272	Msa0837350:intron	45.0%
!!!	GGGTTGCTTTTGCAAAATCG+CGG	+	chr5_4:11343408-11343427	Msa0837350:intron	45.0%
!	GCGGTGACTTACGATGATTT+TGG	+	chr5_4:11343427-11343446	Msa0837350:intron	45.0%
	CCAGCACTTTGCTTCTTAAC+AGG	-	chr5_4:11343705-11343724	None:intergenic	45.0%
	CCTGTTAAGAAGCAAAGTGC+TGG	+	chr5_4:11343702-11343721	Msa0837350:CDS	45.0%
	AAGTATTCTGGCCATGGGTA+GGG	-	chr5_4:11343814-11343833	None:intergenic	45.0%
	CGATTCAAGTATTCTGGCCA+TGG	-	chr5_4:11343820-11343839	None:intergenic	45.0%
	GCCAGAATACTTGAATCGAG+AGG	+	chr5_4:11343822-11343841	Msa0837350:intron	45.0%
	CCCTCTCGATTCAAGTATTC+TGG	-	chr5_4:11343826-11343845	None:intergenic	45.0%
	CCCCCAAAAAATTCCTGCTA+TGG	-	chr5_4:11343888-11343907	None:intergenic	45.0%
!!	TTTTTGGGGGCTTCGTTGTT+TGG	+	chr5_4:11343898-11343917	Msa0837350:intron	45.0%
!!	TTTTGGGGGCTTCGTTGTTT+GGG	+	chr5_4:11343899-11343918	Msa0837350:intron	45.0%
	AGAGAAGAGACCACAATTGC+AGG	-	chr5_4:11344197-11344216	None:intergenic	45.0%
	GACCAGTCTTCAGTAAACTC+TGG	+	chr5_4:11344224-11344243	Msa0837350:intron	45.0%
	CATCTGCCATACTCTTATGG+TGG	+	chr5_4:11344557-11344576	Msa0837350:intron	45.0%
!!	TAGAGGATGATGGTGGTACA+TGG	-	chr5_4:11344597-11344616	None:intergenic	45.0%
	GTGAGCTTGTAACTCTTCAC+AGG	-	chr5_4:11345237-11345256	None:intergenic	45.0%
	TGCACCATGCAATTTCCCAA+TGG	+	chr5_4:11345433-11345452	Msa0837350:CDS	45.0%
	CATCAGGTCATCTTTGCCAT+TGG	-	chr5_4:11345452-11345471	None:intergenic	45.0%
!!!	GTTTTGATTCGACCCGATGA+TGG	+	chr5_4:11345481-11345500	Msa0837350:CDS	45.0%
	AAGACAGCATAGGGACATCA+AGG	-	chr5_4:11345593-11345612	None:intergenic	45.0%
!!	TCATTTTGAGGGTGACGTGT+AGG	-	chr5_4:11345687-11345706	None:intergenic	45.0%
	GGTGCTTCATGTGGATAGAT+GGG	-	chr5_4:11345795-11345814	None:intergenic	45.0%
	CTTTGTCTTGCACTTCACCT+TGG	-	chr5_4:11345817-11345836	None:intergenic	45.0%
	CAAGGTGAAGTGCAAGACAA+AGG	+	chr5_4:11345815-11345834	Msa0837350:CDS	45.0%
	GTGAAGTGCAAGACAAAGGT+AGG	+	chr5_4:11345819-11345838	Msa0837350:intron	45.0%
	TTCAGGGGATCCTCGTAATT+TGG	-	chr5_4:11346168-11346187	None:intergenic	45.0%
	AGCATGGTTTACATACAGCG+GGG	-	chr5_4:11346288-11346307	None:intergenic	45.0%
	GAGCATGGTTTACATACAGC+GGG	-	chr5_4:11346289-11346308	None:intergenic	45.0%
!	TAGATGCGTTTGGTGGTCTA+AGG	-	chr5_4:11346438-11346457	None:intergenic	45.0%
!	TGGCTTTTAGATGCGTTTGG+TGG	-	chr5_4:11346445-11346464	None:intergenic	45.0%
!	TAGATAGGGACGGGCTTGAT+TGG	+	chr5_4:11343499-11343518	Msa0837350:intron	50.0%
	AGTATTCTGGCCATGGGTAG+GGG	-	chr5_4:11343813-11343832	None:intergenic	50.0%
	CAAGTATTCTGGCCATGGGT+AGG	-	chr5_4:11343815-11343834	None:intergenic	50.0%
!	ACATGGTTTTCTCACCCCCA+AGG	-	chr5_4:11345015-11345034	None:intergenic	50.0%
	GGGTGCTTCATGTGGATAGA+TGG	-	chr5_4:11345796-11345815	None:intergenic	50.0%
!	CTATCCACATGAAGCACCCA+AGG	+	chr5_4:11345797-11345816	Msa0837350:CDS	50.0%
	TTCACCTTGGGTGCTTCATG+TGG	-	chr5_4:11345804-11345823	None:intergenic	50.0%
	TGTGCAGGAGCCAAATTACG+AGG	+	chr5_4:11346155-11346174	Msa0837350:intron	50.0%
	AGCAGCGGCATCATGATTCA+GGG	-	chr5_4:11346184-11346203	None:intergenic	50.0%
	AATGTGAGGAGGGCAATGTC+TGG	+	chr5_4:11346237-11346256	Msa0837350:CDS	50.0%
!	GCAATGTCTGGTGGGTATGT+GGG	+	chr5_4:11346249-11346268	Msa0837350:CDS	50.0%
	TTACATACAGCGGGGGAAGA+AGG	-	chr5_4:11346280-11346299	None:intergenic	50.0%
	GCATGGTTTACATACAGCGG+GGG	-	chr5_4:11346287-11346306	None:intergenic	50.0%
	GGCATGGAAGTTGTTGAGCA+TGG	-	chr5_4:11346304-11346323	None:intergenic	50.0%
!!	TTTCTTGGTGGAGGAGCATC+AGG	+	chr5_4:11346406-11346425	Msa0837350:three_prime_UTR	50.0%
	GGCGAGTTGCGTCTTCACAA+AGG	+	chr5_4:11343723-11343742	Msa0837350:CDS	55.0%
	TTTGGGCCTTGGAGTGTGAC+TGG	+	chr5_4:11343916-11343935	Msa0837350:intron	55.0%
	TCCTCTCCAGTCACACTCCA+AGG	-	chr5_4:11343925-11343944	None:intergenic	55.0%
	CTGTAGGCTCTCCTGCTTTG+AGG	+	chr5_4:11344800-11344819	Msa0837350:intron	55.0%
!!	TAGGCTCTCCTGCTTTGAGG+AGG	+	chr5_4:11344803-11344822	Msa0837350:intron	55.0%
!!	TCTCCTGCTTTGAGGAGGAC+AGG	+	chr5_4:11344808-11344827	Msa0837350:intron	55.0%
!!	CTCCTGCTTTGAGGAGGACA+GGG	+	chr5_4:11344809-11344828	Msa0837350:intron	55.0%
	GCAGCGGCATCATGATTCAG+GGG	-	chr5_4:11346183-11346202	None:intergenic	55.0%
	CAGCAGCGGCATCATGATTC+AGG	-	chr5_4:11346185-11346204	None:intergenic	55.0%
	TGAGGAGGGCAATGTCTGGT+GGG	+	chr5_4:11346241-11346260	Msa0837350:CDS	55.0%
!	GGCAATGTCTGGTGGGTATG+TGG	+	chr5_4:11346248-11346267	Msa0837350:CDS	55.0%
	GGGCTTCGTTGTTTGGGCCT+TGG	+	chr5_4:11343905-11343924	Msa0837350:intron	60.0%
	GCCTTGGAGTGTGACTGGAG+AGG	+	chr5_4:11343921-11343940	Msa0837350:intron	60.0%
	GTCCCTGTCCTCCTCAAAGC+AGG	-	chr5_4:11344814-11344833	None:intergenic	60.0%
	GTGAGGAGGGCAATGTCTGG+TGG	+	chr5_4:11346240-11346259	Msa0837350:CDS	60.0%
	GTGGCACTTGCCCCTACCCA+TGG	+	chr5_4:11343800-11343819	Msa0837350:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	11342643	11346553	11342643	ID=Msa0837350;Name=Msa0837350
chr5_4	mRNA	11342643	11346553	11342643	ID=Msa0837350-mRNA-1;Parent=Msa0837350;Name=Msa0837350-mRNA-1;_AED=0.17;_eAED=0.17;_QI=125\|1\|1\|1\|0.8\|0.83\|6\|254\|183
chr5_4	exon	11342643	11342763	11342643	ID=Msa0837350-mRNA-1:exon:4929;Parent=Msa0837350-mRNA-1
chr5_4	exon	11343632	11343744	11343632	ID=Msa0837350-mRNA-1:exon:4930;Parent=Msa0837350-mRNA-1
chr5_4	exon	11345404	11345512	11345404	ID=Msa0837350-mRNA-1:exon:4931;Parent=Msa0837350-mRNA-1
chr5_4	exon	11345758	11345836	11345758	ID=Msa0837350-mRNA-1:exon:4932;Parent=Msa0837350-mRNA-1
chr5_4	exon	11345952	11346068	11345952	ID=Msa0837350-mRNA-1:exon:4933;Parent=Msa0837350-mRNA-1
chr5_4	exon	11346162	11346553	11346162	ID=Msa0837350-mRNA-1:exon:4934;Parent=Msa0837350-mRNA-1
chr5_4	five_prime_UTR	11342643	11342763	11342643	ID=Msa0837350-mRNA-1:five_prime_utr;Parent=Msa0837350-mRNA-1
chr5_4	five_prime_UTR	11343632	11343635	11343632	ID=Msa0837350-mRNA-1:five_prime_utr;Parent=Msa0837350-mRNA-1
chr5_4	CDS	11343636	11343744	11343636	ID=Msa0837350-mRNA-1:cds;Parent=Msa0837350-mRNA-1
chr5_4	CDS	11345404	11345512	11345404	ID=Msa0837350-mRNA-1:cds;Parent=Msa0837350-mRNA-1
chr5_4	CDS	11345758	11345836	11345758	ID=Msa0837350-mRNA-1:cds;Parent=Msa0837350-mRNA-1
chr5_4	CDS	11345952	11346068	11345952	ID=Msa0837350-mRNA-1:cds;Parent=Msa0837350-mRNA-1
chr5_4	CDS	11346162	11346299	11346162	ID=Msa0837350-mRNA-1:cds;Parent=Msa0837350-mRNA-1
chr5_4	three_prime_UTR	11346300	11346553	11346300	ID=Msa0837350-mRNA-1:three_prime_utr;Parent=Msa0837350-mRNA-1

Gene Sequence

>Msa0837350

ATGATTAAACTATTTAAAGTAAAGGAAAAGCAAAGAGAACAAGCTGAAAATGCCAGTAATGGAGTACCTGTTAAGAAGCAAAGTGCTGGCGAGTTGCGTCTTCACAAAGATATAAGTGAGCTGAATCTACCAAAGTCTTGCACCATGCAATTTCCCAATGGCAAAGATGACCTGATGAACTTCGAAGTTTTGATTCGACCCGATGATGGATATTACTTAGGAGGTGCATTTTTGTTTTCCTTCAATGTGTCTCCCATCTATCCACATGAAGCACCCAAGGTGAAGTGCAAGACAAAGGTCTACCATCCAAATATTGACTTGGAAGGAAATGTGTGTCTCAACATCTTAAGAGAAGACTGGAAACCTGTCCTTAATATAAACACTGTCATCTATGGCTTGTATCATCTCTTCACGGAGCCAAATTACGAGGATCCCCTGAATCATGATGCCGCTGCTGTCTTGAGAGATAATCCAAAGATGTTTGAATCTAATGTGAGGAGGGCAATGTCTGGTGGGTATGTGGGACAAACCTTCTTCCCCCGCTGTATGTAA

Protein sequence

>Msa0837350

MIKLFKVKEKQREQAENASNGVPVKKQSAGELRLHKDISELNLPKSCTMQFPNGKDDLMNFEVLIRPDDGYYLGGAFLFSFNVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRDNPKMFESNVRRAMSGGYVGQTFFPRCM*