Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073700 | sp|P78316|NOP14_HUMAN | 28.556 | 921 | 524 | 23 | 16 | 910 | 2 | 814 | 1.80e-83 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073700 | A0A072VVU7 | 95.165 | 972 | 23 | 5 | 1 | 956 | 1 | 964 | 0.0 | 1846 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010820 | Msa0073700 | 0.804943 | 1.694308e-49 | -8.615850e-47 |
| Msa0015680 | Msa0073700 | 0.818608 | 1.794064e-52 | -8.615850e-47 |
| Msa0026150 | Msa0073700 | 0.864823 | 9.212497e-65 | -8.615850e-47 |
| Msa0047160 | Msa0073700 | 0.851573 | 8.128069e-61 | -8.615850e-47 |
| Msa0056030 | Msa0073700 | 0.816885 | 4.391567e-52 | -8.615850e-47 |
| Msa0059040 | Msa0073700 | 0.800858 | 1.183098e-48 | -8.615850e-47 |
| Msa0059110 | Msa0073700 | 0.810319 | 1.222947e-50 | -8.615850e-47 |
| Msa0073700 | Msa0076780 | 0.822529 | 2.255902e-53 | -8.615850e-47 |
| Msa0073700 | Msa0094470 | 0.846435 | 2.175478e-59 | -8.615850e-47 |
| Msa0073700 | Msa0097950 | 0.811272 | 7.607805e-51 | -8.615850e-47 |
| Msa0073700 | Msa0112770 | 0.801739 | 7.811172e-49 | -8.615850e-47 |
| Msa0073700 | Msa0146770 | 0.827367 | 1.627247e-54 | -8.615850e-47 |
| Msa0073700 | Msa0165950 | 0.807873 | 4.086874e-50 | -8.615850e-47 |
| Msa0073700 | Msa0175110 | 0.808745 | 2.663495e-50 | -8.615850e-47 |
| Msa0073700 | Msa0180790 | -0.815701 | 8.077125e-52 | -8.615850e-47 |
| Msa0073700 | Msa0182280 | 0.815745 | 7.896692e-52 | -8.615850e-47 |
| Msa0073700 | Msa0189300 | 0.803868 | 2.838631e-49 | -8.615850e-47 |
| Msa0073700 | Msa0198530 | 0.804755 | 1.855358e-49 | -8.615850e-47 |
| Msa0073700 | Msa0202410 | 0.812518 | 4.072337e-51 | -8.615850e-47 |
| Msa0073700 | Msa0226470 | 0.835625 | 1.505041e-56 | -8.615850e-47 |
| Msa0073700 | Msa0231660 | 0.807946 | 3.942661e-50 | -8.615850e-47 |
| Msa0073700 | Msa0245430 | 0.801954 | 7.056126e-49 | -8.615850e-47 |
| Msa0073700 | Msa0271360 | 0.814618 | 1.405980e-51 | -8.615850e-47 |
| Msa0073700 | Msa0275360 | 0.801941 | 7.100343e-49 | -8.615850e-47 |
| Msa0073700 | Msa0324240 | 0.801122 | 1.044959e-48 | -8.615850e-47 |
| Msa0073700 | Msa0344540 | 0.825488 | 4.560968e-54 | -8.615850e-47 |
| Msa0073700 | Msa0397540 | 0.815668 | 8.216421e-52 | -8.615850e-47 |
| Msa0073700 | Msa0419640 | -0.803186 | 3.930356e-49 | -8.615850e-47 |
| Msa0073700 | Msa0453070 | 0.806264 | 8.949663e-50 | -8.615850e-47 |
| Msa0073700 | Msa0474700 | 0.830109 | 3.533196e-55 | -8.615850e-47 |
| Msa0073700 | Msa0511490 | 0.820112 | 8.148652e-53 | -8.615850e-47 |
| Msa0073700 | Msa0534900 | 0.813721 | 2.217392e-51 | -8.615850e-47 |
| Msa0073700 | Msa0542090 | 0.805915 | 1.059949e-49 | -8.615850e-47 |
| Msa0073700 | Msa0542130 | 0.805155 | 1.530141e-49 | -8.615850e-47 |
| Msa0073700 | Msa0550540 | 0.805027 | 1.627342e-49 | -8.615850e-47 |
| Msa0073700 | Msa0550570 | 0.830369 | 3.053092e-55 | -8.615850e-47 |
| Msa0073700 | Msa0554290 | 0.800973 | 1.120662e-48 | -8.615850e-47 |
| Msa0073700 | Msa0558230 | 0.811211 | 7.841051e-51 | -8.615850e-47 |
| Msa0073700 | Msa0581130 | 0.808100 | 3.656210e-50 | -8.615850e-47 |
| Msa0073700 | Msa0581280 | 0.821984 | 3.018861e-53 | -8.615850e-47 |
| Msa0073700 | Msa0605000 | 0.820133 | 8.057717e-53 | -8.615850e-47 |
| Msa0073700 | Msa0609410 | -0.800057 | 1.723248e-48 | -8.615850e-47 |
| Msa0073700 | Msa0618930 | 0.810411 | 1.168182e-50 | -8.615850e-47 |
| Msa0073700 | Msa0666230 | 0.806838 | 6.771307e-50 | -8.615850e-47 |
| Msa0073700 | Msa0685140 | 0.809175 | 2.154696e-50 | -8.615850e-47 |
| Msa0073700 | Msa0694990 | 0.823784 | 1.149429e-53 | -8.615850e-47 |
| Msa0073700 | Msa0697940 | 0.800723 | 1.260460e-48 | -8.615850e-47 |
| Msa0073700 | Msa0719420 | 0.802835 | 4.645904e-49 | -8.615850e-47 |
| Msa0073700 | Msa0733480 | 0.809183 | 2.146191e-50 | -8.615850e-47 |
| Msa0073700 | Msa0753140 | 0.802176 | 6.352265e-49 | -8.615850e-47 |
| Msa0073700 | Msa0774750 | 0.811737 | 6.028124e-51 | -8.615850e-47 |
| Msa0073700 | Msa0786270 | 0.848117 | 7.516165e-60 | -8.615850e-47 |
| Msa0073700 | Msa0789680 | 0.801668 | 8.077233e-49 | -8.615850e-47 |
| Msa0073700 | Msa0791240 | 0.807348 | 5.281403e-50 | -8.615850e-47 |
| Msa0073700 | Msa0798440 | 0.800056 | 1.723754e-48 | -8.615850e-47 |
| Msa0073700 | Msa0798810 | -0.803292 | 3.737073e-49 | -8.615850e-47 |
| Msa0073700 | Msa0802410 | 0.808093 | 3.668270e-50 | -8.615850e-47 |
| Msa0073700 | Msa0805500 | 0.812127 | 4.958063e-51 | -8.615850e-47 |
| Msa0073700 | Msa0812290 | 0.801908 | 7.209611e-49 | -8.615850e-47 |
| Msa0073700 | Msa0819060 | 0.820167 | 7.912267e-53 | -8.615850e-47 |
| Msa0073700 | Msa0823090 | 0.823995 | 1.025702e-53 | -8.615850e-47 |
| Msa0073700 | Msa0830540 | 0.811032 | 8.573237e-51 | -8.615850e-47 |
| Msa0073700 | Msa0837350 | -0.804958 | 1.682536e-49 | -8.615850e-47 |
| Msa0073700 | Msa0839200 | 0.817219 | 3.693862e-52 | -8.615850e-47 |
| Msa0073700 | Msa0859180 | 0.818424 | 1.974229e-52 | -8.615850e-47 |
| Msa0073700 | Msa0887250 | 0.822199 | 2.691732e-53 | -8.615850e-47 |
| Msa0073700 | Msa0918390 | 0.806021 | 1.006957e-49 | -8.615850e-47 |
| Msa0073700 | Msa0945440 | 0.806085 | 9.761597e-50 | -8.615850e-47 |
| Msa0073700 | Msa0981430 | 0.827903 | 1.209526e-54 | -8.615850e-47 |
| Msa0073700 | Msa0987370 | 0.806158 | 9.424912e-50 | -8.615850e-47 |
| Msa0073700 | Msa1001350 | 0.805523 | 1.281305e-49 | -8.615850e-47 |
| Msa0073700 | Msa1009750 | 0.805417 | 1.348684e-49 | -8.615850e-47 |
| Msa0073700 | Msa1014420 | 0.809555 | 1.786112e-50 | -8.615850e-47 |
| Msa0073700 | Msa1019240 | 0.803567 | 3.278180e-49 | -8.615850e-47 |
| Msa0073700 | Msa1055410 | 0.812721 | 3.676788e-51 | -8.615850e-47 |
| Msa0073700 | Msa1068870 | 0.820649 | 6.136435e-53 | -8.615850e-47 |
| Msa0073700 | Msa1073900 | 0.801885 | 7.290306e-49 | -8.615850e-47 |
| Msa0073700 | Msa1077030 | 0.821708 | 3.497143e-53 | -8.615850e-47 |
| Msa0073700 | Msa1091940 | 0.813841 | 2.086253e-51 | -8.615850e-47 |
| Msa0073700 | Msa1093330 | 0.826279 | 2.960348e-54 | -8.615850e-47 |
| Msa0073700 | Msa1097820 | 0.808120 | 3.619596e-50 | -8.615850e-47 |
| Msa0073700 | Msa1120810 | 0.802738 | 4.865189e-49 | -8.615850e-47 |
| Msa0073700 | Msa1126850 | 0.807113 | 5.922705e-50 | -8.615850e-47 |
| Msa0073700 | Msa1165960 | 0.811519 | 6.721840e-51 | -8.615850e-47 |
| Msa0073700 | Msa1178060 | 0.807086 | 6.000531e-50 | -8.615850e-47 |
| Msa0073700 | Msa1179950 | 0.830376 | 3.041212e-55 | -8.615850e-47 |
| Msa0073700 | Msa1179980 | 0.837243 | 5.832366e-57 | -8.615850e-47 |
| Msa0073700 | Msa1209200 | 0.814385 | 1.582527e-51 | -8.615850e-47 |
| Msa0073700 | Msa1211830 | 0.805581 | 1.245619e-49 | -8.615850e-47 |
| Msa0073700 | Msa1217580 | 0.820032 | 8.496679e-53 | -8.615850e-47 |
| Msa0073700 | Msa1226610 | 0.807404 | 5.138045e-50 | -8.615850e-47 |
| Msa0073700 | Msa1265630 | 0.852184 | 5.452909e-61 | -8.615850e-47 |
| Msa0073700 | Msa1270620 | 0.827700 | 1.353665e-54 | -8.615850e-47 |
| Msa0073700 | Msa1270690 | 0.830136 | 3.481074e-55 | -8.615850e-47 |
| Msa0073700 | Msa1271580 | 0.802394 | 5.727973e-49 | -8.615850e-47 |
| Msa0073700 | Msa1278900 | 0.812270 | 4.613616e-51 | -8.615850e-47 |
| Msa0073700 | Msa1299700 | 0.806576 | 7.691364e-50 | -8.615850e-47 |
| Msa0073700 | Msa1302380 | 0.838938 | 2.135212e-57 | -8.615850e-47 |
| Msa0073700 | Msa1306990 | 0.820913 | 5.334627e-53 | -8.615850e-47 |
| Msa0073700 | Msa1332220 | 0.808170 | 3.531773e-50 | -8.615850e-47 |
| Msa0073700 | Msa1332590 | 0.844312 | 8.175488e-59 | -8.615850e-47 |
| Msa0073700 | Msa1335250 | 0.801588 | 8.388217e-49 | -8.615850e-47 |
| Msa0073700 | Msa1351540 | 0.816066 | 6.696639e-52 | -8.615850e-47 |
| Msa0073700 | Msa1355700 | 0.834103 | 3.636320e-56 | -8.615850e-47 |
| Msa0073700 | Msa1360140 | 0.803680 | 3.105067e-49 | -8.615850e-47 |
| Msa0073700 | Msa1366650 | 0.814094 | 1.835032e-51 | -8.615850e-47 |
| Msa0073700 | Msa1368060 | 0.811215 | 7.826268e-51 | -8.615850e-47 |
| Msa0073700 | Msa1388860 | 0.824503 | 7.793785e-54 | -8.615850e-47 |
| Msa0073700 | Msa1394290 | 0.816358 | 5.762802e-52 | -8.615850e-47 |
| Msa0073700 | Msa1397940 | 0.807243 | 5.558245e-50 | -8.615850e-47 |
| Msa0073700 | Msa1398090 | 0.804376 | 2.225064e-49 | -8.615850e-47 |
| Msa0073700 | Msa1400580 | 0.804698 | 1.906758e-49 | -8.615850e-47 |
| Msa0073700 | Msa1419870 | 0.801985 | 6.954668e-49 | -8.615850e-47 |
| Msa0073700 | Msa1433600 | 0.809888 | 1.514805e-50 | -8.615850e-47 |
| Msa0073700 | Msa1444310 | 0.817103 | 3.922787e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073700 | MtrunA17_Chr1g0181141 | 95.165 | 972 | 23 | 5 | 1 | 956 | 1 | 964 | 0.0 | 1846 |
| Msa0073700 | MtrunA17_Chr1g0167361 | 92.879 | 969 | 44 | 7 | 1 | 956 | 1 | 957 | 0.0 | 1606 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073700 | AT1G69070.2 | 50.213 | 940 | 388 | 17 | 26 | 948 | 18 | 894 | 0.0 | 785 |
| Msa0073700 | AT1G69070.1 | 50.267 | 937 | 389 | 17 | 26 | 948 | 18 | 891 | 0.0 | 783 |
Find 193 sgRNAs with CRISPR-Local
Find 537 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTAGAGAAGAAAGAATT+AGG | 0.172943 | 1_2:-47549570 | None:intergenic |
| TTCGTTCATCACTTCCTTCT+TGG | 0.196187 | 1_2:-47552245 | None:intergenic |
| TCTTCACTACTGACAGTTTC+AGG | 0.214470 | 1_2:+47557645 | Msa0073700:CDS |
| CTGCCAGTTATATCATCTTA+TGG | 0.216501 | 1_2:+47557520 | Msa0073700:intron |
| AAAATTGGTGAAAATATTTC+TGG | 0.216827 | 1_2:-47558030 | None:intergenic |
| TGAAGAAACTATGACTAAAA+AGG | 0.225009 | 1_2:+47553351 | Msa0073700:CDS |
| GATGAAGGACTTGATGATTT+TGG | 0.225284 | 1_2:+47549981 | Msa0073700:CDS |
| TGCTTTCATGGCTACTGCTT+CGG | 0.243552 | 1_2:-47549751 | None:intergenic |
| TGCTCCAACGACTATCTTCT+TGG | 0.257256 | 1_2:-47553746 | None:intergenic |
| GGAAAGAGAAAGGTCTTTAA+TGG | 0.261736 | 1_2:+47558484 | Msa0073700:CDS |
| TTCAAAGCTTTCATCTTGTT+TGG | 0.273827 | 1_2:-47552491 | None:intergenic |
| GCAGAAGTTGATAAGGTAAA+AGG | 0.285083 | 1_2:+47553643 | Msa0073700:CDS |
| GCTTTCATGGCTACTGCTTC+GGG | 0.299044 | 1_2:-47549750 | None:intergenic |
| TCAAGTAGTAATCTCAAAAT+TGG | 0.299845 | 1_2:-47558045 | None:intergenic |
| TTCGGAGCTTCAATTATATA+AGG | 0.299927 | 1_2:-47553793 | None:intergenic |
| AGAATACTACTTTGAAAGAT+TGG | 0.304400 | 1_2:+47553515 | Msa0073700:CDS |
| TTTGCAGATATTTCAGATTT+GGG | 0.309214 | 1_2:+47551955 | Msa0073700:intron |
| ATATCACGGCCAGATGTTAT+TGG | 0.309858 | 1_2:-47555188 | None:intergenic |
| CTTTCAGCTCGCTCACTGTC+TGG | 0.314704 | 1_2:-47558374 | None:intergenic |
| GCACATATTGCAGCAAAGTA+TGG | 0.315156 | 1_2:-47554862 | None:intergenic |
| TCGATGATTTCGCCATTGTT+GGG | 0.315866 | 1_2:-47549659 | None:intergenic |
| TTCGATGATTTCGCCATTGT+TGG | 0.318731 | 1_2:-47549660 | None:intergenic |
| ATCAATAAACTCAGACGATT+TGG | 0.319822 | 1_2:-47549940 | None:intergenic |
| AAAGTTTGAATAAATACTAT+TGG | 0.330563 | 1_2:-47556201 | None:intergenic |
| TGAATAAATACTATTGGTTC+AGG | 0.334462 | 1_2:-47556195 | None:intergenic |
| CAAGAACATGCTTTCAAATC+TGG | 0.340841 | 1_2:+47558557 | Msa0073700:CDS |
| TTCTTGATGCAGCTATGTTA+AGG | 0.341761 | 1_2:+47558337 | Msa0073700:intron |
| TTCCCTAAAGTCACAGTAAC+AGG | 0.351877 | 1_2:-47552051 | None:intergenic |
| TTCAGTAATTTGATTGGAAC+TGG | 0.357854 | 1_2:-47558195 | None:intergenic |
| AAGCATGTTCTTGCTCTTGA+AGG | 0.361044 | 1_2:-47558547 | None:intergenic |
| AACTAGAGAAGAAAGAATTA+GGG | 0.363719 | 1_2:-47549569 | None:intergenic |
| TGACCAACTTGTCAGACAAT+TGG | 0.376534 | 1_2:+47552705 | Msa0073700:CDS |
| CTTCTTCTTCTTGCTGGTGG+TGG | 0.378523 | 1_2:-47549703 | None:intergenic |
| TTAGGATTCAGTAATTTGAT+TGG | 0.384079 | 1_2:-47558201 | None:intergenic |
| GAGTTTATTGATAGAAGAAT+TGG | 0.386457 | 1_2:+47549951 | Msa0073700:CDS |
| AAAATATGCCAAATGCATTA+CGG | 0.387295 | 1_2:+47558082 | Msa0073700:CDS |
| AAGGCAAGAGCTGAGAAGTA+TGG | 0.387698 | 1_2:+47558509 | Msa0073700:CDS |
| GACAATGAATAATTCTGTTC+AGG | 0.394333 | 1_2:+47552577 | Msa0073700:CDS |
| AGGTAAAAGGATTGAATGTT+GGG | 0.395632 | 1_2:+47553656 | Msa0073700:CDS |
| AGTATCACAGGAGTCATAAC+TGG | 0.397195 | 1_2:-47555137 | None:intergenic |
| AAGGTAAAAGGATTGAATGT+TGG | 0.397569 | 1_2:+47553655 | Msa0073700:CDS |
| AAACAAGATGAAAGCTTTGA+AGG | 0.398300 | 1_2:+47552493 | Msa0073700:CDS |
| GGAAGTGTAAAGGGAGATAA+TGG | 0.398968 | 1_2:+47553712 | Msa0073700:CDS |
| ATTACTGAATCCTAAGTTTG+AGG | 0.398976 | 1_2:+47558209 | Msa0073700:CDS |
| GTGAAGAATGGAGAGTCTTC+AGG | 0.403043 | 1_2:-47557629 | None:intergenic |
| GAGATCGCAGCGGGAACGTC+AGG | 0.403484 | 1_2:+47550016 | Msa0073700:CDS |
| GATTCTGTTGGAAGTGTAAA+GGG | 0.404106 | 1_2:+47553703 | Msa0073700:CDS |
| TCTTGATGCAGCTATGTTAA+GGG | 0.406379 | 1_2:+47558338 | Msa0073700:intron |
| GATGAATTTGAAGGAATTGA+TGG | 0.414203 | 1_2:+47551606 | Msa0073700:CDS |
| AAATATGCCAAATGCATTAC+GGG | 0.415102 | 1_2:+47558083 | Msa0073700:CDS |
| TTTGAAGGAATTGATGGTCT+TGG | 0.415825 | 1_2:+47551612 | Msa0073700:CDS |
| CGCTGTGTCTCTTGCGATTG+TGG | 0.416722 | 1_2:+47555081 | Msa0073700:CDS |
| AGGTGAGGCGTGAAGCTAAA+GGG | 0.417578 | 1_2:+47558414 | Msa0073700:CDS |
| GAATACTACTTTGAAAGATT+GGG | 0.420352 | 1_2:+47553516 | Msa0073700:CDS |
| TATCACGGCCAGATGTTATT+GGG | 0.421115 | 1_2:-47555187 | None:intergenic |
| CTCTCCTTCAAATAATATGC+GGG | 0.421315 | 1_2:-47558739 | None:intergenic |
| TCATCACCAGAGAGAGATCT+TGG | 0.422739 | 1_2:-47553304 | None:intergenic |
| ACAAGTTGGTCATATTCATC+TGG | 0.423674 | 1_2:-47552694 | None:intergenic |
| GAATAAATGTTAAAACTTGT+GGG | 0.424369 | 1_2:+47558622 | Msa0073700:three_prime_UTR |
| GATCCCCGCATATTATTTGA+AGG | 0.425529 | 1_2:+47558735 | Msa0073700:three_prime_UTR |
| TCCTCATTAATGCGCAATAG+TGG | 0.429661 | 1_2:-47557560 | None:intergenic |
| TCTGTACTCATCTCTATCAA+TGG | 0.429795 | 1_2:-47554835 | None:intergenic |
| CATAATTCTTCAAAGGTCTT+CGG | 0.431108 | 1_2:-47553811 | None:intergenic |
| TGAGAGAAGAGATGAGGAGG+AGG | 0.431745 | 1_2:+47553393 | Msa0073700:CDS |
| GAGGCTGGTCTAGCTGACGG+TGG | 0.431971 | 1_2:+47552015 | Msa0073700:CDS |
| AGGCATTGATATATCCTTGT+AGG | 0.432380 | 1_2:-47557987 | None:intergenic |
| CATAACTGGATGTCTAAAAT+CGG | 0.433346 | 1_2:-47555123 | None:intergenic |
| GAAGATGATGATGAATTTGA+AGG | 0.433623 | 1_2:+47551597 | Msa0073700:CDS |
| CGTAGGAAATTCGAAGTAAT+GGG | 0.434226 | 1_2:+47549819 | Msa0073700:CDS |
| GACCAACTTGTCAGACAATT+GGG | 0.434843 | 1_2:+47552706 | Msa0073700:CDS |
| AAGAGCTGCAGAAGTTGATA+AGG | 0.435279 | 1_2:+47553636 | Msa0073700:CDS |
| AAATCTGGACAACTAGGAAA+AGG | 0.438682 | 1_2:+47558572 | Msa0073700:CDS |
| AGATAAGGACTTCACTTCTC+TGG | 0.442591 | 1_2:+47552436 | Msa0073700:CDS |
| TATATCATGCGAAAATTCTC+AGG | 0.447408 | 1_2:+47556251 | Msa0073700:CDS |
| GCAACCCATTCGAGTCAATC+TGG | 0.448516 | 1_2:+47549793 | Msa0073700:CDS |
| GATGAAAGCTTTGAAGGCTC+TGG | 0.454907 | 1_2:+47552499 | Msa0073700:CDS |
| CGATGATTTCGCCATTGTTG+GGG | 0.455374 | 1_2:-47549658 | None:intergenic |
| ATGCAGAGTCCAGGGGAGGC+TGG | 0.457299 | 1_2:+47552000 | Msa0073700:CDS |
| AAGAGAACGTCTAGAGGAGT+TGG | 0.457721 | 1_2:+47552792 | Msa0073700:CDS |
| CTTGCTGGTGGTGGTTCCGT+TGG | 0.462169 | 1_2:-47549694 | None:intergenic |
| TGATATATGTTTACTTTCAG+TGG | 0.466596 | 1_2:-47556235 | None:intergenic |
| TCTTAATCATCAATCGGATT+CGG | 0.468845 | 1_2:+47553869 | Msa0073700:CDS |
| TCAGCTAGACCAGCCTCCCC+TGG | 0.471953 | 1_2:-47552009 | None:intergenic |
| TGAATAAATGTTAAAACTTG+TGG | 0.472318 | 1_2:+47558621 | Msa0073700:three_prime_UTR |
| AGGCTGGTCTAGCTGACGGT+GGG | 0.474412 | 1_2:+47552016 | Msa0073700:CDS |
| ACTTTGAAGATGAGATGCTT+GGG | 0.474875 | 1_2:+47551643 | Msa0073700:CDS |
| GAACGAACTCAAGTTATCAT+AGG | 0.478056 | 1_2:-47558007 | None:intergenic |
| GGTAGAGGGTGTGGTGGAGA+AGG | 0.481464 | 1_2:-47549621 | None:intergenic |
| CTTTGAAGAATTATGTTCAC+TGG | 0.483060 | 1_2:+47553819 | Msa0073700:CDS |
| AATATTTCAACTTTAGTCAC+TGG | 0.483233 | 1_2:+47558818 | Msa0073700:three_prime_UTR |
| CTACTTCTTGCTTGATGTGA+AGG | 0.483308 | 1_2:+47558463 | Msa0073700:CDS |
| ACGTAGGAAATTCGAAGTAA+TGG | 0.485316 | 1_2:+47549818 | Msa0073700:CDS |
| ACACTATCTTAATCATCAAT+CGG | 0.489425 | 1_2:+47553863 | Msa0073700:CDS |
| ATCCCAATTGTCTGACAAGT+TGG | 0.491655 | 1_2:-47552708 | None:intergenic |
| AGTCAGAGACAGCAAGGCCT+CGG | 0.491759 | 1_2:-47552465 | None:intergenic |
| GCAAAGAGAAATGATTCTGT+TGG | 0.491781 | 1_2:+47553691 | Msa0073700:CDS |
| AAATTGGTGAAAATATTTCT+GGG | 0.493600 | 1_2:-47558029 | None:intergenic |
| GGCATTGATATATCCTTGTA+GGG | 0.493842 | 1_2:-47557986 | None:intergenic |
| AAGATAGGTTGTCTGCTAAA+CGG | 0.495911 | 1_2:+47552555 | Msa0073700:CDS |
| CAGATATTTCAGATTTGGGC+TGG | 0.496204 | 1_2:+47551959 | Msa0073700:intron |
| AAAGGAGATACGAAACGAAT+GGG | 0.500382 | 1_2:+47549852 | Msa0073700:CDS |
| TCTTGAGAGAAGAGATGAGG+AGG | 0.501654 | 1_2:+47553390 | Msa0073700:CDS |
| GACTTTGAAGATGAGATGCT+TGG | 0.502031 | 1_2:+47551642 | Msa0073700:CDS |
| ATGCGTTGCCCAATAACATC+TGG | 0.502843 | 1_2:+47555179 | Msa0073700:CDS |
| CTGACGGTGGGGAAAATGTA+AGG | 0.506509 | 1_2:+47552028 | Msa0073700:CDS |
| GCCACTATTGCGCATTAATG+AGG | 0.509019 | 1_2:+47557559 | Msa0073700:CDS |
| GAGGTGAGGCGTGAAGCTAA+AGG | 0.509324 | 1_2:+47558413 | Msa0073700:CDS |
| TGGTGAAGATTCTGATGATT+CGG | 0.509906 | 1_2:+47553438 | Msa0073700:CDS |
| AGGTCTGAAGATTCTGATGA+AGG | 0.511371 | 1_2:+47553463 | Msa0073700:CDS |
| GAGAAACCAAGATCTCTCTC+TGG | 0.511990 | 1_2:+47553298 | Msa0073700:CDS |
| GCTCATGGTATGCAGAGTCC+AGG | 0.514901 | 1_2:+47551991 | Msa0073700:CDS |
| GGGGAGGCTGGTCTAGCTGA+CGG | 0.515785 | 1_2:+47552012 | Msa0073700:CDS |
| TGATTCTGTTGGAAGTGTAA+AGG | 0.516796 | 1_2:+47553702 | Msa0073700:CDS |
| CACTTCTCTGGCTCATTCCG+AGG | 0.518270 | 1_2:+47552448 | Msa0073700:CDS |
| AGAATTGGTGAGAATGATGA+AGG | 0.523968 | 1_2:+47549966 | Msa0073700:CDS |
| AATCTGGACAACTAGGAAAA+GGG | 0.524082 | 1_2:+47558573 | Msa0073700:CDS |
| GAAGAAGAACAACAACAAGA+TGG | 0.524250 | 1_2:+47549725 | Msa0073700:CDS |
| AAACTGTCAGTAGTGAAGAA+TGG | 0.525835 | 1_2:-47557641 | None:intergenic |
| AAGGAATTGATGGTCTTGGA+AGG | 0.527484 | 1_2:+47551616 | Msa0073700:CDS |
| CACATATTGCAGCAAAGTAT+GGG | 0.528243 | 1_2:-47554861 | None:intergenic |
| GCTTTCAAATCTGGACAACT+AGG | 0.529239 | 1_2:+47558566 | Msa0073700:CDS |
| GGCTGGCGTCATAATGCTCA+TGG | 0.529831 | 1_2:+47551976 | Msa0073700:CDS |
| GATAGTCACTTACAAAGTAA+TGG | 0.534292 | 1_2:-47558774 | None:intergenic |
| AGAAAGGTCTTTAATGGAGA+AGG | 0.536130 | 1_2:+47558490 | Msa0073700:CDS |
| AGAACGTCTAGAGGAGTTGG+AGG | 0.537126 | 1_2:+47552795 | Msa0073700:CDS |
| GTGACCAGATTGACTCGAAT+GGG | 0.542975 | 1_2:-47549797 | None:intergenic |
| CTCATGGTATGCAGAGTCCA+GGG | 0.546926 | 1_2:+47551992 | Msa0073700:CDS |
| GATATCAGTGCAGGTTCAGA+AGG | 0.548400 | 1_2:+47553556 | Msa0073700:CDS |
| TCGCACATCAATAGTATCAC+AGG | 0.550865 | 1_2:-47555149 | None:intergenic |
| AGACACAGCGTCTTTGAAGA+AGG | 0.550949 | 1_2:-47555068 | None:intergenic |
| TGGATGAACATCATACTTTG+AGG | 0.551930 | 1_2:+47558145 | Msa0073700:CDS |
| TCTCTCTCTGGTGATGACCT+TGG | 0.559106 | 1_2:+47553310 | Msa0073700:CDS |
| GATACCAAGAAGATAGTCGT+TGG | 0.560935 | 1_2:+47553742 | Msa0073700:CDS |
| CTATCACAGAAAGTAGCAGC+TGG | 0.562254 | 1_2:+47555045 | Msa0073700:intron |
| GACAACGGAAGAGATTGCTC+AGG | 0.562815 | 1_2:+47552765 | Msa0073700:CDS |
| GGTTAAAGAGACTAGAACAT+CGG | 0.563412 | 1_2:+47558706 | Msa0073700:intron |
| TGAAGAATTATGTTCACTGG+TGG | 0.563978 | 1_2:+47553822 | Msa0073700:CDS |
| TTGATGTGAAGGAAAGAGAA+AGG | 0.568599 | 1_2:+47558474 | Msa0073700:CDS |
| CCTGCTGGAAGGATTAGATA+AGG | 0.573153 | 1_2:+47552421 | Msa0073700:CDS |
| CGTGACCAGATTGACTCGAA+TGG | 0.575204 | 1_2:-47549798 | None:intergenic |
| TCTCTTGCGATTGTGGTCCA+TGG | 0.576194 | 1_2:+47555088 | Msa0073700:CDS |
| AAGAAGAACAACAACAAGAT+GGG | 0.576229 | 1_2:+47549726 | Msa0073700:CDS |
| GATTCTTGAGAGAAGAGATG+AGG | 0.577765 | 1_2:+47553387 | Msa0073700:CDS |
| GTTCTCTTGCTATTGAGAAG+AGG | 0.577774 | 1_2:+47549883 | Msa0073700:CDS |
| GATGATGATGATATCAGTGC+AGG | 0.578213 | 1_2:+47553547 | Msa0073700:CDS |
| AATAAATGTTAAAACTTGTG+GGG | 0.578482 | 1_2:+47558623 | Msa0073700:three_prime_UTR |
| GAAGATGATGATATTAGTGC+TGG | 0.580487 | 1_2:+47553580 | Msa0073700:CDS |
| ACCTCTGTTGAAACCCTACA+AGG | 0.581709 | 1_2:+47557973 | Msa0073700:CDS |
| ACGGGATAAAATTAAAGATG+TGG | 0.582762 | 1_2:+47558101 | Msa0073700:CDS |
| AGTTTCTTCATCGACAGAGA+AGG | 0.583142 | 1_2:-47553338 | None:intergenic |
| TTCACTCGAATCTTCAGCAG+CGG | 0.584454 | 1_2:-47553242 | None:intergenic |
| AACGGAAGAGATTGCTCAGG+AGG | 0.586845 | 1_2:+47552768 | Msa0073700:CDS |
| GGAGGAAAGAGAACGTCTAG+AGG | 0.587808 | 1_2:+47552786 | Msa0073700:CDS |
| CAAGAGCTGAGAAGTATGGA+AGG | 0.589540 | 1_2:+47558513 | Msa0073700:CDS |
| TCTCTCCTTCAAATAATATG+CGG | 0.593155 | 1_2:-47558740 | None:intergenic |
| CAGTGAACATAATTCTTCAA+AGG | 0.594264 | 1_2:-47553818 | None:intergenic |
| TTGAGCGGTAGAGGGTGTGG+TGG | 0.595054 | 1_2:-47549627 | None:intergenic |
| GAAAGGAGATACGAAACGAA+TGG | 0.596188 | 1_2:+47549851 | Msa0073700:CDS |
| CCTTATCTAATCCTTCCAGC+AGG | 0.597560 | 1_2:-47552421 | None:intergenic |
| ATCGGAACATGGAAATACCA+TGG | 0.602060 | 1_2:-47555105 | None:intergenic |
| AGATACGAAACGAATGGGGT+TGG | 0.602764 | 1_2:+47549857 | Msa0073700:CDS |
| GTTGTCTTCAGCCTATCTGA+AGG | 0.603029 | 1_2:-47552748 | None:intergenic |
| TCCTTGTAGGGTTTCAACAG+AGG | 0.609177 | 1_2:-47557974 | None:intergenic |
| AAGAACCAACGGCAATATCA+CGG | 0.614085 | 1_2:-47555202 | None:intergenic |
| GGCTGGTCTAGCTGACGGTG+GGG | 0.614401 | 1_2:+47552017 | Msa0073700:CDS |
| ACAGAGACATAAAACCAAGA+AGG | 0.615445 | 1_2:+47552231 | Msa0073700:intron |
| AAAGATGAAGACCTGCTGGA+AGG | 0.616144 | 1_2:+47552410 | Msa0073700:CDS |
| TGGTTCAGTCAGAGACAGCA+AGG | 0.616908 | 1_2:-47552471 | None:intergenic |
| GGTGAGGCGTGAAGCTAAAG+GGG | 0.618945 | 1_2:+47558415 | Msa0073700:CDS |
| TGCGTGCTCGTCCTTCAGAT+AGG | 0.623838 | 1_2:+47552737 | Msa0073700:CDS |
| AGATTCTGATGAAGGATCTG+AGG | 0.625208 | 1_2:+47553471 | Msa0073700:CDS |
| AGGAATTGATGGTCTTGGAA+GGG | 0.625979 | 1_2:+47551617 | Msa0073700:CDS |
| TCTCCTTCAAATAATATGCG+GGG | 0.628466 | 1_2:-47558738 | None:intergenic |
| GATGATTTCGCCATTGTTGG+GGG | 0.629232 | 1_2:-47549657 | None:intergenic |
| TCGAAGTAATGGGTCAGAAG+CGG | 0.631084 | 1_2:+47549829 | Msa0073700:CDS |
| GAGAGAAGAGATGAGGAGGA+GGG | 0.637619 | 1_2:+47553394 | Msa0073700:CDS |
| TTCAGATAGGCTGAAGACAA+CGG | 0.639755 | 1_2:+47552750 | Msa0073700:CDS |
| GGATGTCTAAAATCGGAACA+TGG | 0.639818 | 1_2:-47555116 | None:intergenic |
| AAGATTCTGATGATTCGGAA+AGG | 0.644071 | 1_2:+47553443 | Msa0073700:CDS |
| TCGAAACGCAGCATCGCCAA+CGG | 0.648466 | 1_2:+47549678 | Msa0073700:CDS |
| TGAGCTGATTAAGTTGAAAG+TGG | 0.649315 | 1_2:+47558125 | Msa0073700:CDS |
| TGAGGCGACCACTTCAAATG+CGG | 0.651913 | 1_2:+47558163 | Msa0073700:CDS |
| GTAATGGGTCAGAAGCGGAA+AGG | 0.654267 | 1_2:+47549834 | Msa0073700:CDS |
| TCTTCTAGTGAAGATGATGA+TGG | 0.654306 | 1_2:+47553418 | Msa0073700:CDS |
| TCGAGTCAATCTGGTCACGT+AGG | 0.664541 | 1_2:+47549802 | Msa0073700:CDS |
| GAAGATGATGATGAAACTGA+TGG | 0.666421 | 1_2:+47551666 | Msa0073700:CDS |
| CGACAGAGAAGGAATCGCCA+AGG | 0.671556 | 1_2:-47553327 | None:intergenic |
| TGGTATGCAGAGTCCAGGGG+AGG | 0.674017 | 1_2:+47551996 | Msa0073700:CDS |
| AAGGAGATACGAAACGAATG+GGG | 0.675045 | 1_2:+47549853 | Msa0073700:CDS |
| TTTGAAGGAGAGAAACACAA+TGG | 0.680469 | 1_2:+47558750 | Msa0073700:three_prime_UTR |
| CTTTGAAGATGAGATGCTTG+GGG | 0.680980 | 1_2:+47551644 | Msa0073700:CDS |
| TCATGGTATGCAGAGTCCAG+GGG | 0.687360 | 1_2:+47551993 | Msa0073700:CDS |
| AGAAGATGAAGATGATGACG+AGG | 0.691743 | 1_2:+47553606 | Msa0073700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr1_2:47555869-47555888 | None:intergenic | 0.0% |
| !!! | TTGTATGTATTTTTTAAATT+TGG | - | chr1_2:47551355-47551374 | None:intergenic | 10.0% |
| !!! | AACTTGTTTTAATTAATTTT+AGG | - | chr1_2:47554420-47554439 | None:intergenic | 10.0% |
| !!! | TTTACTTTTGAATTTTTTAT+AGG | + | chr1_2:47555283-47555302 | Msa0073700:intron | 10.0% |
| !!! | AAGATTTTAGAATATTAAAT+CGG | + | chr1_2:47556843-47556862 | Msa0073700:intron | 10.0% |
| !! | TAAACATAATATTAATGATA+TGG | + | chr1_2:47556925-47556944 | Msa0073700:intron | 10.0% |
| !! | CAAAAAAATGCAAAAATAAA+TGG | - | chr1_2:47549536-47549555 | None:intergenic | 15.0% |
| !!! | AATAATTCACAAAATTTTCA+AGG | - | chr1_2:47551504-47551523 | None:intergenic | 15.0% |
| !! | ATGTTAATTATCAAATTATC+AGG | - | chr1_2:47551795-47551814 | None:intergenic | 15.0% |
| !!! | TGATAATTTGATAATTAACA+TGG | + | chr1_2:47551794-47551813 | Msa0073700:intron | 15.0% |
| !! | TAATATAACAGTTAAAACTT+GGG | - | chr1_2:47554065-47554084 | None:intergenic | 15.0% |
| !! | TTAATATAACAGTTAAAACT+TGG | - | chr1_2:47554066-47554085 | None:intergenic | 15.0% |
| !!! | TGTTATATTAAACTTTTATG+TGG | + | chr1_2:47554075-47554094 | Msa0073700:intron | 15.0% |
| !! | TAGAAAAAGAAAAAAAAACA+GGG | - | chr1_2:47554311-47554330 | None:intergenic | 15.0% |
| !! | AATTTGAACAAAAAACTTAA+AGG | - | chr1_2:47555358-47555377 | None:intergenic | 15.0% |
| !!! | TTTAAGTTTTTTGTTCAAAT+TGG | + | chr1_2:47555357-47555376 | Msa0073700:intron | 15.0% |
| !!! | TAAGTTTTTTTGTTACAAAT+TGG | - | chr1_2:47555794-47555813 | None:intergenic | 15.0% |
| !! | TTTGTAACAAAAAAACTTAA+AGG | + | chr1_2:47555795-47555814 | Msa0073700:intron | 15.0% |
| !! | TATAGATTTACATAAAGAAT+TGG | - | chr1_2:47555978-47555997 | None:intergenic | 15.0% |
| !!! | TTCTAAGATCTTTTTTTTAT+TGG | + | chr1_2:47556043-47556062 | Msa0073700:intron | 15.0% |
| !! | AAAGTTTGAATAAATACTAT+TGG | - | chr1_2:47556204-47556223 | None:intergenic | 15.0% |
| !! | TGTTTGTATTTATTTATGTA+TGG | + | chr1_2:47556348-47556367 | Msa0073700:intron | 15.0% |
| !!! | TTTTATAGTATACATAGTAT+AGG | - | chr1_2:47556589-47556608 | None:intergenic | 15.0% |
| !!! | AGATTTTAGAATATTAAATC+GGG | + | chr1_2:47556844-47556863 | Msa0073700:intron | 15.0% |
| !!! | ATCATGTTTTGATGATTTAA+AGG | - | chr1_2:47550329-47550348 | None:intergenic | 20.0% |
| !!! | CATATTTTTGGTTTCAATTT+TGG | - | chr1_2:47550391-47550410 | None:intergenic | 20.0% |
| !!! | ACATACATTAAGCATATTTT+TGG | - | chr1_2:47550403-47550422 | None:intergenic | 20.0% |
| !! | AAATATGCTTAATGTATGTT+TGG | + | chr1_2:47550404-47550423 | Msa0073700:intron | 20.0% |
| !!! | TTCAAATTCAATTTTGAAAG+TGG | + | chr1_2:47550661-47550680 | Msa0073700:intron | 20.0% |
| !! | AATGTAAATAATCTGAAAAC+AGG | + | chr1_2:47551092-47551111 | Msa0073700:intron | 20.0% |
| !! | GCTTATTAGAGTTTATATAT+TGG | - | chr1_2:47551167-47551186 | None:intergenic | 20.0% |
| !!! | GTGAATTATTGATTGTTTTA+TGG | + | chr1_2:47551514-47551533 | Msa0073700:intron | 20.0% |
| !! | TACCTAATATATCATGTTAA+TGG | + | chr1_2:47551716-47551735 | Msa0073700:intron | 20.0% |
| !! | TAAAACAAACAGTATAAACA+TGG | - | chr1_2:47551849-47551868 | None:intergenic | 20.0% |
| !! | CATTTGTGAAAAGTTTAAAA+AGG | - | chr1_2:47552161-47552180 | None:intergenic | 20.0% |
| !! | ATGAAAAAAGTGATAAAGAT+AGG | + | chr1_2:47552540-47552559 | Msa0073700:CDS | 20.0% |
| !! | CTTATAAAAAGAAGATATCA+GGG | - | chr1_2:47552634-47552653 | None:intergenic | 20.0% |
| !! | TCTTATAAAAAGAAGATATC+AGG | - | chr1_2:47552635-47552654 | None:intergenic | 20.0% |
| !! | ATCCATAATTTCAGAAAAAA+CGG | + | chr1_2:47553206-47553225 | Msa0073700:intron | 20.0% |
| !! | AGAAAAAGAAAAAAAAACAG+GGG | - | chr1_2:47554310-47554329 | None:intergenic | 20.0% |
| !! | CTAGAAAAAGAAAAAAAAAC+AGG | - | chr1_2:47554312-47554331 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTTTTCTTTTTCT+AGG | + | chr1_2:47554310-47554329 | Msa0073700:intron | 20.0% |
| !!! | ATTTTATTGATTGTTAAGCA+GGG | - | chr1_2:47554345-47554364 | None:intergenic | 20.0% |
| !!! | TATTTTATTGATTGTTAAGC+AGG | - | chr1_2:47554346-47554365 | None:intergenic | 20.0% |
| !!! | AATTTTAGGTGCTATATAAT+GGG | - | chr1_2:47554406-47554425 | None:intergenic | 20.0% |
| !!! | TAATTTTAGGTGCTATATAA+TGG | - | chr1_2:47554407-47554426 | None:intergenic | 20.0% |
| !! | GATTGATATAATCTAGTTAA+TGG | + | chr1_2:47554451-47554470 | Msa0073700:intron | 20.0% |
| !!! | GTTTAATTTGAAAAAGTTCA+TGG | + | chr1_2:47554507-47554526 | Msa0073700:intron | 20.0% |
| !! | AAGTTCCTCATAAAATATTT+AGG | - | chr1_2:47554669-47554688 | None:intergenic | 20.0% |
| !! | AATACCTGAAAAGATAAATA+CGG | - | chr1_2:47554733-47554752 | None:intergenic | 20.0% |
| !!! | TTATCTTTTCAGGTATTTTA+TGG | + | chr1_2:47554736-47554755 | Msa0073700:intron | 20.0% |
| !! | ATAGTTCTTGATAAAAGTTA+AGG | - | chr1_2:47554981-47555000 | None:intergenic | 20.0% |
| !!! | TTTTATCAAGAACTATGAAT+TGG | + | chr1_2:47554985-47555004 | Msa0073700:intron | 20.0% |
| !! | GTTATAAATGTCTAACTTAA+AGG | - | chr1_2:47555327-47555346 | None:intergenic | 20.0% |
| !! | GTAAGTAATCATGTTTAATA+AGG | - | chr1_2:47555520-47555539 | None:intergenic | 20.0% |
| !! | GTTTGATGAAAATATGATAA+TGG | + | chr1_2:47555742-47555761 | Msa0073700:intron | 20.0% |
| !!! | CAGATATTTTATGACTTAAA+AGG | + | chr1_2:47555767-47555786 | Msa0073700:intron | 20.0% |
| !! | GTTATAAACATCTAACTTAA+AGG | + | chr1_2:47555826-47555845 | Msa0073700:intron | 20.0% |
| !! | AGAAACTAATTACTGAAAAA+GGG | + | chr1_2:47556785-47556804 | Msa0073700:intron | 20.0% |
| !! | TGATGAATATCAAACTAATT+TGG | + | chr1_2:47556897-47556916 | Msa0073700:intron | 20.0% |
| !!! | AGTTAATTAGGTTGTATATT+TGG | - | chr1_2:47557124-47557143 | None:intergenic | 20.0% |
| !! | ATATCTTATCTGTATTTCAA+GGG | - | chr1_2:47557301-47557320 | None:intergenic | 20.0% |
| !! | AATATCTTATCTGTATTTCA+AGG | - | chr1_2:47557302-47557321 | None:intergenic | 20.0% |
| !! | GATATATAATATCATGCATA+TGG | + | chr1_2:47557432-47557451 | Msa0073700:intron | 20.0% |
| !!! | TAACATTTTTCTTGCAAAAA+AGG | - | chr1_2:47557689-47557708 | None:intergenic | 20.0% |
| !! | GCTATGATAACAAATATAAA+TGG | - | chr1_2:47557811-47557830 | None:intergenic | 20.0% |
| !! | AAATTGGTGAAAATATTTCT+GGG | - | chr1_2:47558032-47558051 | None:intergenic | 20.0% |
| !! | AAAATTGGTGAAAATATTTC+TGG | - | chr1_2:47558033-47558052 | None:intergenic | 20.0% |
| !! | TGAATAAATGTTAAAACTTG+TGG | + | chr1_2:47558621-47558640 | Msa0073700:three_prime_UTR | 20.0% |
| !! | GAATAAATGTTAAAACTTGT+GGG | + | chr1_2:47558622-47558641 | Msa0073700:three_prime_UTR | 20.0% |
| !! | AATAAATGTTAAAACTTGTG+GGG | + | chr1_2:47558623-47558642 | Msa0073700:three_prime_UTR | 20.0% |
| ! | AACTAGAGAAGAAAGAATTA+GGG | - | chr1_2:47549572-47549591 | None:intergenic | 25.0% |
| ! | AAACTAGAGAAGAAAGAATT+AGG | - | chr1_2:47549573-47549592 | None:intergenic | 25.0% |
| ! | GAGTTTATTGATAGAAGAAT+TGG | + | chr1_2:47549951-47549970 | Msa0073700:CDS | 25.0% |
| ! | CTTAAATGCTTATCATGATA+CGG | + | chr1_2:47550083-47550102 | Msa0073700:intron | 25.0% |
| !! | AATTCACTCAAAGTCAATTT+TGG | - | chr1_2:47550442-47550461 | None:intergenic | 25.0% |
| !! | AATTGATTCTACTTGAAGTA+AGG | - | chr1_2:47550584-47550603 | None:intergenic | 25.0% |
| ! | AAGCTATAAACTGTTATCTT+GGG | - | chr1_2:47550835-47550854 | None:intergenic | 25.0% |
| ! | TAAGCTATAAACTGTTATCT+TGG | - | chr1_2:47550836-47550855 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAACATATCT+CGG | + | chr1_2:47551062-47551081 | Msa0073700:intron | 25.0% |
| !! | TTGTTTTCATAACATATCTC+GGG | + | chr1_2:47551063-47551082 | Msa0073700:intron | 25.0% |
| ! | TACAATCAAACAATCACTTT+AGG | - | chr1_2:47551204-47551223 | None:intergenic | 25.0% |
| ! | TACAAATACTTGATTCTCAT+TGG | + | chr1_2:47551370-47551389 | Msa0073700:intron | 25.0% |
| ! | ACAAATACTTGATTCTCATT+GGG | + | chr1_2:47551371-47551390 | Msa0073700:intron | 25.0% |
| ! | GACCATTAACATGATATATT+AGG | - | chr1_2:47551721-47551740 | None:intergenic | 25.0% |
| ! | TTTGAACTCTAATTAGCTAT+TGG | + | chr1_2:47551766-47551785 | Msa0073700:intron | 25.0% |
| !! | TTTTGCAGATATTTCAGATT+TGG | + | chr1_2:47551954-47551973 | Msa0073700:intron | 25.0% |
| ! | TTTGCAGATATTTCAGATTT+GGG | + | chr1_2:47551955-47551974 | Msa0073700:intron | 25.0% |
| ! | TAAAGAGAAAGTTGGAATAT+AGG | - | chr1_2:47552662-47552681 | None:intergenic | 25.0% |
| ! | ATATTCCAACTTTCTCTTTA+TGG | + | chr1_2:47552662-47552681 | Msa0073700:intron | 25.0% |
| ! | TGAAGAAACTATGACTAAAA+AGG | + | chr1_2:47553351-47553370 | Msa0073700:CDS | 25.0% |
| ! | GAAGAAACTATGACTAAAAA+GGG | + | chr1_2:47553352-47553371 | Msa0073700:CDS | 25.0% |
| !! | AGAATACTACTTTGAAAGAT+TGG | + | chr1_2:47553515-47553534 | Msa0073700:CDS | 25.0% |
| !! | GAATACTACTTTGAAAGATT+GGG | + | chr1_2:47553516-47553535 | Msa0073700:CDS | 25.0% |
| ! | ACACTATCTTAATCATCAAT+CGG | + | chr1_2:47553863-47553882 | Msa0073700:CDS | 25.0% |
| !! | TATTCCATTTACAATTTTGC+TGG | + | chr1_2:47554156-47554175 | Msa0073700:intron | 25.0% |
| ! | AAACTGAGAGAAAAAAGAAT+TGG | + | chr1_2:47554248-47554267 | Msa0073700:intron | 25.0% |
| ! | AAAGAATTGGTCAACATATA+TGG | + | chr1_2:47554261-47554280 | Msa0073700:intron | 25.0% |
| !!! | TTTTATTGATTGTTAAGCAG+GGG | - | chr1_2:47554344-47554363 | None:intergenic | 25.0% |
| ! | TGATATAATCTAGTTAATGG+AGG | + | chr1_2:47554454-47554473 | Msa0073700:intron | 25.0% |
| !!! | AATAGACTAATTTGCTTAGT+TGG | + | chr1_2:47554614-47554633 | Msa0073700:intron | 25.0% |
| !! | CTGTTCCTAAATATTTTATG+AGG | + | chr1_2:47554661-47554680 | Msa0073700:intron | 25.0% |
| !! | ATAACCGTATTTATCTTTTC+AGG | + | chr1_2:47554726-47554745 | Msa0073700:intron | 25.0% |
| ! | TTGTAACAGAAAAAACTTAC+AGG | - | chr1_2:47555384-47555403 | None:intergenic | 25.0% |
| !! | ACAAAGTTGGTTGAAAAAAT+GGG | - | chr1_2:47555443-47555462 | None:intergenic | 25.0% |
| !! | AACAAAGTTGGTTGAAAAAA+TGG | - | chr1_2:47555444-47555463 | None:intergenic | 25.0% |
| ! | TCATGGATCATTTAACATTA+AGG | + | chr1_2:47555473-47555492 | Msa0073700:intron | 25.0% |
| ! | TGATTTCTACCATTAAAAAG+TGG | + | chr1_2:47555945-47555964 | Msa0073700:intron | 25.0% |
| ! | GATTTACATAAAGAATTGGT+AGG | - | chr1_2:47555974-47555993 | None:intergenic | 25.0% |
| !!! | TGAATAAATACTATTGGTTC+AGG | - | chr1_2:47556198-47556217 | None:intergenic | 25.0% |
| ! | TGATATATGTTTACTTTCAG+TGG | - | chr1_2:47556238-47556257 | None:intergenic | 25.0% |
| !! | CATTTTCTTGTATATTCTAC+TGG | + | chr1_2:47556521-47556540 | Msa0073700:intron | 25.0% |
| ! | ACTAACGAAAAAGATAAAAG+GGG | - | chr1_2:47556549-47556568 | None:intergenic | 25.0% |
| ! | CACTAACGAAAAAGATAAAA+GGG | - | chr1_2:47556550-47556569 | None:intergenic | 25.0% |
| ! | ACACTAACGAAAAAGATAAA+AGG | - | chr1_2:47556551-47556570 | None:intergenic | 25.0% |
| !! | GAAAAAGAAAATGCTGTTTA+CGG | + | chr1_2:47556626-47556645 | Msa0073700:intron | 25.0% |
| ! | GAGAAACTAATTACTGAAAA+AGG | + | chr1_2:47556784-47556803 | Msa0073700:intron | 25.0% |
| ! | GAAACTAATTACTGAAAAAG+GGG | + | chr1_2:47556786-47556805 | Msa0073700:intron | 25.0% |
| !!! | ATTAAATCGGGTTAGTTTTT+TGG | + | chr1_2:47556856-47556875 | Msa0073700:intron | 25.0% |
| ! | ATATTAATGATATGGACTTC+TGG | + | chr1_2:47556933-47556952 | Msa0073700:intron | 25.0% |
| !!! | CACTTCATCCTTTTTTTTTA+CGG | - | chr1_2:47557187-47557206 | None:intergenic | 25.0% |
| ! | TGTTTCATAAAACCTTTCAT+TGG | + | chr1_2:47557212-47557231 | Msa0073700:intron | 25.0% |
| ! | TTCAAAACAACATTAAAGGT+AGG | - | chr1_2:47557254-47557273 | None:intergenic | 25.0% |
| ! | ACGTTTCAAAACAACATTAA+AGG | - | chr1_2:47557258-47557277 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTTGTGAACTTTA+AGG | - | chr1_2:47557352-47557371 | None:intergenic | 25.0% |
| ! | CATGATATTATATATCATGC+AGG | - | chr1_2:47557428-47557447 | None:intergenic | 25.0% |
| ! | CAAAAAAGGTGGTAATAAAT+TGG | - | chr1_2:47557675-47557694 | None:intergenic | 25.0% |
| ! | AGATTGACTACAAAATATCA+TGG | - | chr1_2:47557715-47557734 | None:intergenic | 25.0% |
| ! | TGATAACAAATATAAATGGC+AGG | - | chr1_2:47557807-47557826 | None:intergenic | 25.0% |
| ! | CTATGATCTTATAACTGATA+TGG | + | chr1_2:47557830-47557849 | Msa0073700:intron | 25.0% |
| !!! | GAAATGTTTTTCAAATACTG+TGG | + | chr1_2:47557895-47557914 | Msa0073700:intron | 25.0% |
| !!! | AATTATGCTTTTTCGATTAC+AGG | + | chr1_2:47557935-47557954 | Msa0073700:intron | 25.0% |
| !!! | ATTATGCTTTTTCGATTACA+GGG | + | chr1_2:47557936-47557955 | Msa0073700:intron | 25.0% |
| ! | TCAAGTAGTAATCTCAAAAT+TGG | - | chr1_2:47558048-47558067 | None:intergenic | 25.0% |
| ! | AAAATATGCCAAATGCATTA+CGG | + | chr1_2:47558082-47558101 | Msa0073700:CDS | 25.0% |
| ! | TTAGGATTCAGTAATTTGAT+TGG | - | chr1_2:47558204-47558223 | None:intergenic | 25.0% |
| ! | CATATTACCAAATTGAAACA+TGG | - | chr1_2:47558256-47558275 | None:intergenic | 25.0% |
| ! | AAGAAAAAAATTGAAGAGAG+AGG | + | chr1_2:47558394-47558413 | Msa0073700:CDS | 25.0% |
| !!! | CGTTTTTTGAATACTAATGT+TGG | + | chr1_2:47558685-47558704 | Msa0073700:intron | 25.0% |
| ! | AATATTTCAACTTTAGTCAC+TGG | + | chr1_2:47558818-47558837 | Msa0073700:three_prime_UTR | 25.0% |
| AAGAAGAACAACAACAAGAT+GGG | + | chr1_2:47549726-47549745 | Msa0073700:CDS | 30.0% | |
| !! | TTTTTGAGCTTTTGCTTTCA+TGG | - | chr1_2:47549766-47549785 | None:intergenic | 30.0% |
| ATCAATAAACTCAGACGATT+TGG | - | chr1_2:47549943-47549962 | None:intergenic | 30.0% | |
| ! | TAGTGAGTTGAATGTATGTT+TGG | + | chr1_2:47550203-47550222 | Msa0073700:intron | 30.0% |
| ! | AGCTAGCAATTTGTAGATTT+TGG | - | chr1_2:47550288-47550307 | None:intergenic | 30.0% |
| AGCTCAAATAAGTGTATGTT+TGG | - | chr1_2:47550722-47550741 | None:intergenic | 30.0% | |
| TCTACCAGTATAAATGTTTG+TGG | + | chr1_2:47550744-47550763 | Msa0073700:intron | 30.0% | |
| CTACCAGTATAAATGTTTGT+GGG | + | chr1_2:47550745-47550764 | Msa0073700:intron | 30.0% | |
| TATCCCACAAACATTTATAC+TGG | - | chr1_2:47550751-47550770 | None:intergenic | 30.0% | |
| AGCTATAAACTGTTATCTTG+GGG | - | chr1_2:47550834-47550853 | None:intergenic | 30.0% | |
| AACAAGCTATTTATCCAATC+AGG | + | chr1_2:47551002-47551021 | Msa0073700:intron | 30.0% | |
| ACAAGCTATTTATCCAATCA+GGG | + | chr1_2:47551003-47551022 | Msa0073700:intron | 30.0% | |
| AACTATATTATTGCCCTGAT+TGG | - | chr1_2:47551019-47551038 | None:intergenic | 30.0% | |
| ! | TGTTTTCATAACATATCTCG+GGG | + | chr1_2:47551064-47551083 | Msa0073700:intron | 30.0% |
| ! | ATAAGCTTTGTGAGACTATT+TGG | - | chr1_2:47551143-47551162 | None:intergenic | 30.0% |
| ! | TGTTATCGTTCTGAGTTTAA+TGG | + | chr1_2:47551260-47551279 | Msa0073700:intron | 30.0% |
| ! | GTTATCGTTCTGAGTTTAAT+GGG | + | chr1_2:47551261-47551280 | Msa0073700:intron | 30.0% |
| ! | GAAGATGATGATGAATTTGA+AGG | + | chr1_2:47551597-47551616 | Msa0073700:CDS | 30.0% |
| GATGAATTTGAAGGAATTGA+TGG | + | chr1_2:47551606-47551625 | Msa0073700:CDS | 30.0% | |
| ! | TTAATGGTCTATTTGCTGAT+TGG | + | chr1_2:47551732-47551751 | Msa0073700:intron | 30.0% |
| CATCACAAAAATAACACAAC+AGG | - | chr1_2:47551914-47551933 | None:intergenic | 30.0% | |
| ATTTCTGTTTCAGTGACTAT+AGG | + | chr1_2:47552113-47552132 | Msa0073700:intron | 30.0% | |
| TTTCTGTTTCAGTGACTATA+GGG | + | chr1_2:47552114-47552133 | Msa0073700:intron | 30.0% | |
| ! | TGCAAAAAGCAAGTTTTACA+AGG | + | chr1_2:47552273-47552292 | Msa0073700:CDS | 30.0% |
| TGTGCGATATTTCTTAAATC+AGG | + | chr1_2:47552296-47552315 | Msa0073700:intron | 30.0% | |
| GTGCGATATTTCTTAAATCA+GGG | + | chr1_2:47552297-47552316 | Msa0073700:intron | 30.0% | |
| ! | CTTTCACTCTAATATTTTCC+AGG | + | chr1_2:47552364-47552383 | Msa0073700:intron | 30.0% |
| TTCAAAGCTTTCATCTTGTT+TGG | - | chr1_2:47552494-47552513 | None:intergenic | 30.0% | |
| ! | AAACAAGATGAAAGCTTTGA+AGG | + | chr1_2:47552493-47552512 | Msa0073700:CDS | 30.0% |
| GACAATGAATAATTCTGTTC+AGG | + | chr1_2:47552577-47552596 | Msa0073700:CDS | 30.0% | |
| ATCAGATATACAACCAAGAT+TGG | - | chr1_2:47552915-47552934 | None:intergenic | 30.0% | |
| !!! | ATCTGATCTTCGTTTTAAGA+TGG | + | chr1_2:47552928-47552947 | Msa0073700:intron | 30.0% |
| !!! | ATGGTTTAGATGACTTGTTT+TGG | + | chr1_2:47552947-47552966 | Msa0073700:intron | 30.0% |
| !!! | TGCCGTTTTTTCTGAAATTA+TGG | - | chr1_2:47553211-47553230 | None:intergenic | 30.0% |
| AAACTATGACTAAAAAGGGT+TGG | + | chr1_2:47553356-47553375 | Msa0073700:CDS | 30.0% | |
| AACTATGACTAAAAAGGGTT+GGG | + | chr1_2:47553357-47553376 | Msa0073700:CDS | 30.0% | |
| AAGGTAAAAGGATTGAATGT+TGG | + | chr1_2:47553655-47553674 | Msa0073700:CDS | 30.0% | |
| AGGTAAAAGGATTGAATGTT+GGG | + | chr1_2:47553656-47553675 | Msa0073700:CDS | 30.0% | |
| TTCGGAGCTTCAATTATATA+AGG | - | chr1_2:47553796-47553815 | None:intergenic | 30.0% | |
| CATAATTCTTCAAAGGTCTT+CGG | - | chr1_2:47553814-47553833 | None:intergenic | 30.0% | |
| CAGTGAACATAATTCTTCAA+AGG | - | chr1_2:47553821-47553840 | None:intergenic | 30.0% | |
| ! | CTTTGAAGAATTATGTTCAC+TGG | + | chr1_2:47553819-47553838 | Msa0073700:CDS | 30.0% |
| TCTTAATCATCAATCGGATT+CGG | + | chr1_2:47553869-47553888 | Msa0073700:CDS | 30.0% | |
| ATAATCTAGTTAATGGAGGT+TGG | + | chr1_2:47554458-47554477 | Msa0073700:intron | 30.0% | |
| ! | TAAATCTGAGTATTGCAAAC+TGG | - | chr1_2:47554595-47554614 | None:intergenic | 30.0% |
| !!! | ATTGCAGTATTTTGCTGTTT+TGG | + | chr1_2:47554765-47554784 | Msa0073700:CDS | 30.0% |
| ! | CATAACTGGATGTCTAAAAT+CGG | - | chr1_2:47555126-47555145 | None:intergenic | 30.0% |
| AGAACATAAGAAAGAACCAA+CGG | - | chr1_2:47555216-47555235 | None:intergenic | 30.0% | |
| TGAGCACTATTTAACAAAGT+TGG | - | chr1_2:47555456-47555475 | None:intergenic | 30.0% | |
| ACTTTGTTAAATAGTGCTCA+TGG | + | chr1_2:47555456-47555475 | Msa0073700:intron | 30.0% | |
| TGGATCATTTAACATTAAGG+TGG | + | chr1_2:47555476-47555495 | Msa0073700:intron | 30.0% | |
| TCATTTAACATTAAGGTGGT+AGG | + | chr1_2:47555480-47555499 | Msa0073700:intron | 30.0% | |
| GTGGACATTTAATCTTAAGT+TGG | - | chr1_2:47555703-47555722 | None:intergenic | 30.0% | |
| GTTATCACCATTCATCAATA+AGG | + | chr1_2:47555904-47555923 | Msa0073700:intron | 30.0% | |
| ATCAGATCCTTATTGATGAA+TGG | - | chr1_2:47555914-47555933 | None:intergenic | 30.0% | |
| TTATATTCATTGTGTGAGCA+AGG | - | chr1_2:47556141-47556160 | None:intergenic | 30.0% | |
| ACACAATGAATATAAAACGC+AGG | + | chr1_2:47556146-47556165 | Msa0073700:intron | 30.0% | |
| TATATCATGCGAAAATTCTC+AGG | + | chr1_2:47556251-47556270 | Msa0073700:CDS | 30.0% | |
| TAAATACAAACATATGCGCA+TGG | - | chr1_2:47556340-47556359 | None:intergenic | 30.0% | |
| AATGATTAGCACTAGTGTTA+AGG | - | chr1_2:47556460-47556479 | None:intergenic | 30.0% | |
| ATAGTATAGGTTAGTACACA+TGG | - | chr1_2:47556576-47556595 | None:intergenic | 30.0% | |
| ! | ACAGCATTTTCTTTTTCTAC+TGG | - | chr1_2:47556623-47556642 | None:intergenic | 30.0% |
| AAAATTTCCATTAGAGACGT+AGG | - | chr1_2:47556758-47556777 | None:intergenic | 30.0% | |
| ! | CTCTAATGGAAATTTTGCTA+AGG | + | chr1_2:47556762-47556781 | Msa0073700:intron | 30.0% |
| !! | AGTTGATTCAACTTTTCTTG+TGG | + | chr1_2:47557026-47557045 | Msa0073700:intron | 30.0% |
| TAATATTAAGTGCGAGATCT+TGG | - | chr1_2:47557090-47557109 | None:intergenic | 30.0% | |
| TGTTGGGGTAAAAGTTAATT+AGG | - | chr1_2:47557136-47557155 | None:intergenic | 30.0% | |
| !! | TACTGAAACACAATTTGTTG+GGG | - | chr1_2:47557151-47557170 | None:intergenic | 30.0% |
| ! | GTACTGAAACACAATTTGTT+GGG | - | chr1_2:47557152-47557171 | None:intergenic | 30.0% |
| TGTACTGAAACACAATTTGT+TGG | - | chr1_2:47557153-47557172 | None:intergenic | 30.0% | |
| AGTGATGTCCGTAAAAAAAA+AGG | + | chr1_2:47557176-47557195 | Msa0073700:intron | 30.0% | |
| !! | ACTGTTTTTCATCCAATGAA+AGG | - | chr1_2:47557227-47557246 | None:intergenic | 30.0% |
| ATTATCCAACCATAACATTC+TGG | - | chr1_2:47557478-47557497 | None:intergenic | 30.0% | |
| GTTCCATAAGATGATATAAC+TGG | - | chr1_2:47557526-47557545 | None:intergenic | 30.0% | |
| ! | CATTTTTCTTGCAAAAAAGG+TGG | - | chr1_2:47557686-47557705 | None:intergenic | 30.0% |
| TTGAACAAAGAAAATAGCAG+CGG | + | chr1_2:47557747-47557766 | Msa0073700:intron | 30.0% | |
| AAATATGCCAAATGCATTAC+GGG | + | chr1_2:47558083-47558102 | Msa0073700:CDS | 30.0% | |
| ! | ATTTTATCCCGTAATGCATT+TGG | - | chr1_2:47558093-47558112 | None:intergenic | 30.0% |
| ACGGGATAAAATTAAAGATG+TGG | + | chr1_2:47558101-47558120 | Msa0073700:CDS | 30.0% | |
| TTCAGTAATTTGATTGGAAC+TGG | - | chr1_2:47558198-47558217 | None:intergenic | 30.0% | |
| ATTACTGAATCCTAAGTTTG+AGG | + | chr1_2:47558209-47558228 | Msa0073700:CDS | 30.0% | |
| !! | ACTTACTTTTCCTCAAACTT+AGG | - | chr1_2:47558222-47558241 | None:intergenic | 30.0% |
| CCAAATTGAAACATGGAAAA+CGG | - | chr1_2:47558249-47558268 | None:intergenic | 30.0% | |
| TCTCTCCTTCAAATAATATG+CGG | - | chr1_2:47558743-47558762 | None:intergenic | 30.0% | |
| GATAGTCACTTACAAAGTAA+TGG | - | chr1_2:47558777-47558796 | None:intergenic | 30.0% | |
| GAAGAAGAACAACAACAAGA+TGG | + | chr1_2:47549725-47549744 | Msa0073700:CDS | 35.0% | |
| ACGTAGGAAATTCGAAGTAA+TGG | + | chr1_2:47549818-47549837 | Msa0073700:CDS | 35.0% | |
| CGTAGGAAATTCGAAGTAAT+GGG | + | chr1_2:47549819-47549838 | Msa0073700:CDS | 35.0% | |
| AAAGGAGATACGAAACGAAT+GGG | + | chr1_2:47549852-47549871 | Msa0073700:CDS | 35.0% | |
| AGAATTGGTGAGAATGATGA+AGG | + | chr1_2:47549966-47549985 | Msa0073700:CDS | 35.0% | |
| !! | GATGAAGGACTTGATGATTT+TGG | + | chr1_2:47549981-47550000 | Msa0073700:CDS | 35.0% |
| ! | GGATTGACTTAGTGTATGTT+TGG | + | chr1_2:47550143-47550162 | Msa0073700:intron | 35.0% |
| TGACTTAGTGTATGTTTGGT+TGG | + | chr1_2:47550147-47550166 | Msa0073700:intron | 35.0% | |
| TGGATGTGTTTATGTACAAG+TGG | + | chr1_2:47550223-47550242 | Msa0073700:intron | 35.0% | |
| AGAGTCAATAGTGATTCTAG+AGG | - | chr1_2:47550368-47550387 | None:intergenic | 35.0% | |
| !! | CACTCAAAGTCAATTTTGGT+GGG | - | chr1_2:47550438-47550457 | None:intergenic | 35.0% |
| ! | TCACTCAAAGTCAATTTTGG+TGG | - | chr1_2:47550439-47550458 | None:intergenic | 35.0% |
| ! | CTAGCTAAAAGTGAGTTGAA+TGG | + | chr1_2:47550466-47550485 | Msa0073700:intron | 35.0% |
| ATACTTGATTCTGACATGGT+TGG | - | chr1_2:47550621-47550640 | None:intergenic | 35.0% | |
| TGACATACTTGATTCTGACA+TGG | - | chr1_2:47550625-47550644 | None:intergenic | 35.0% | |
| AGACTTGATTCTGACATGTT+TGG | - | chr1_2:47550689-47550708 | None:intergenic | 35.0% | |
| TCTAATAAGCCAATCCAAAC+AGG | + | chr1_2:47551177-47551196 | Msa0073700:intron | 35.0% | |
| ! | TCGTTGGATGTTGATTGAAA+GGG | - | chr1_2:47551291-47551310 | None:intergenic | 35.0% |
| CTCATTTCAGAAACAGTTCT+TGG | - | chr1_2:47551449-47551468 | None:intergenic | 35.0% | |
| ! | TTTGAAGGAATTGATGGTCT+TGG | + | chr1_2:47551612-47551631 | Msa0073700:CDS | 35.0% |
| ! | ACTTTGAAGATGAGATGCTT+GGG | + | chr1_2:47551643-47551662 | Msa0073700:CDS | 35.0% |
| ! | GAAGATGATGATGAAACTGA+TGG | + | chr1_2:47551666-47551685 | Msa0073700:CDS | 35.0% |
| ! | TCTATTTGCTGATTGGAACT+TGG | + | chr1_2:47551739-47551758 | Msa0073700:intron | 35.0% |
| !! | TAGATTACAGAAAGCACTCA+TGG | - | chr1_2:47552087-47552106 | None:intergenic | 35.0% |
| GTCACTGAAACAGAAATAAC+TGG | - | chr1_2:47552110-47552129 | None:intergenic | 35.0% | |
| !!! | TCTTGGTTTTATGTCTCTGT+AGG | - | chr1_2:47552231-47552250 | None:intergenic | 35.0% |
| ACAGAGACATAAAACCAAGA+AGG | + | chr1_2:47552231-47552250 | Msa0073700:intron | 35.0% | |
| !!! | TTTCTTTTGCTTTTTCAGCC+TGG | - | chr1_2:47552385-47552404 | None:intergenic | 35.0% |
| GGCTGAAAAAGCAAAAGAAA+AGG | + | chr1_2:47552385-47552404 | Msa0073700:intron | 35.0% | |
| AAGATAGGTTGTCTGCTAAA+CGG | + | chr1_2:47552555-47552574 | Msa0073700:CDS | 35.0% | |
| GTACCATTATTTATCCTCGA+GGG | + | chr1_2:47552599-47552618 | Msa0073700:intron | 35.0% | |
| !! | ACAAGTTGGTCATATTCATC+TGG | - | chr1_2:47552697-47552716 | None:intergenic | 35.0% |
| GATTAACTGATCACCAATCT+TGG | + | chr1_2:47552899-47552918 | Msa0073700:intron | 35.0% | |
| TTTGGCCAAAGTGTATAAAC+AGG | + | chr1_2:47552965-47552984 | Msa0073700:intron | 35.0% | |
| TTGGCCAAAGTGTATAAACA+GGG | + | chr1_2:47552966-47552985 | Msa0073700:intron | 35.0% | |
| TCATCCCTGTTTATACACTT+TGG | - | chr1_2:47552973-47552992 | None:intergenic | 35.0% | |
| ! | GCATTAAGCTAGGTAGTTTT+GGG | - | chr1_2:47552997-47553016 | None:intergenic | 35.0% |
| ! | TGCATTAAGCTAGGTAGTTT+TGG | - | chr1_2:47552998-47553017 | None:intergenic | 35.0% |
| AAAACTACCTAGCTTAATGC+AGG | + | chr1_2:47552997-47553016 | Msa0073700:intron | 35.0% | |
| ! | TTGGTGATAGTCATGGAAAT+GGG | + | chr1_2:47553116-47553135 | Msa0073700:intron | 35.0% |
| ! | GATCTTGGTTTCTCTTTTGA+TGG | - | chr1_2:47553292-47553311 | None:intergenic | 35.0% |
| TCTTCTAGTGAAGATGATGA+TGG | + | chr1_2:47553418-47553437 | Msa0073700:CDS | 35.0% | |
| TGGTGAAGATTCTGATGATT+CGG | + | chr1_2:47553438-47553457 | Msa0073700:CDS | 35.0% | |
| ! | AAGATTCTGATGATTCGGAA+AGG | + | chr1_2:47553443-47553462 | Msa0073700:CDS | 35.0% |
| GAAGATGATGATATTAGTGC+TGG | + | chr1_2:47553580-47553599 | Msa0073700:CDS | 35.0% | |
| !! | GCAGAAGTTGATAAGGTAAA+AGG | + | chr1_2:47553643-47553662 | Msa0073700:CDS | 35.0% |
| GCAAAGAGAAATGATTCTGT+TGG | + | chr1_2:47553691-47553710 | Msa0073700:CDS | 35.0% | |
| ! | TGATTCTGTTGGAAGTGTAA+AGG | + | chr1_2:47553702-47553721 | Msa0073700:CDS | 35.0% |
| ! | GATTCTGTTGGAAGTGTAAA+GGG | + | chr1_2:47553703-47553722 | Msa0073700:CDS | 35.0% |
| TGAAGAATTATGTTCACTGG+TGG | + | chr1_2:47553822-47553841 | Msa0073700:CDS | 35.0% | |
| !!! | TGTTTTGATCCATATCTCCT+TGG | + | chr1_2:47553969-47553988 | Msa0073700:intron | 35.0% |
| ATACAAACACCAAGGAGATA+TGG | - | chr1_2:47553981-47554000 | None:intergenic | 35.0% | |
| AAGCATGAATACAAACACCA+AGG | - | chr1_2:47553989-47554008 | None:intergenic | 35.0% | |
| AGCACCAGCAAAATTGTAAA+TGG | - | chr1_2:47554163-47554182 | None:intergenic | 35.0% | |
| GTGCTACAATTATTCCCTAT+AGG | + | chr1_2:47554178-47554197 | Msa0073700:intron | 35.0% | |
| ACAGTAATCAGTCTCCTATA+GGG | - | chr1_2:47554195-47554214 | None:intergenic | 35.0% | |
| AACAGTAATCAGTCTCCTAT+AGG | - | chr1_2:47554196-47554215 | None:intergenic | 35.0% | |
| ! | CAGTTTCTACAAGTCTTGTA+GGG | - | chr1_2:47554234-47554253 | None:intergenic | 35.0% |
| ! | TCAGTTTCTACAAGTCTTGT+AGG | - | chr1_2:47554235-47554254 | None:intergenic | 35.0% |
| ATATATGGTACACAGCTAAC+AGG | + | chr1_2:47554276-47554295 | Msa0073700:intron | 35.0% | |
| TATATGGTACACAGCTAACA+GGG | + | chr1_2:47554277-47554296 | Msa0073700:intron | 35.0% | |
| GTTGTCATTGATGTATTGCA+TGG | + | chr1_2:47554485-47554504 | Msa0073700:intron | 35.0% | |
| AAAAGAATGCAAACAACCAC+AGG | - | chr1_2:47554562-47554581 | None:intergenic | 35.0% | |
| ! | TGAGTATTGCAAACTGGATT+GGG | - | chr1_2:47554589-47554608 | None:intergenic | 35.0% |
| TCTGTACTCATCTCTATCAA+TGG | - | chr1_2:47554838-47554857 | None:intergenic | 35.0% | |
| CACATATTGCAGCAAAGTAT+GGG | - | chr1_2:47554864-47554883 | None:intergenic | 35.0% | |
| ! | GTTGAGAGTATAAAAAACGC+AGG | + | chr1_2:47554919-47554938 | Msa0073700:CDS | 35.0% |
| GATAAAAGTTAAGGCAGAGA+CGG | - | chr1_2:47554972-47554991 | None:intergenic | 35.0% | |
| ATTCATCGCTCTCAAAACAA+GGG | - | chr1_2:47555671-47555690 | None:intergenic | 35.0% | |
| AATTCATCGCTCTCAAAACA+AGG | - | chr1_2:47555672-47555691 | None:intergenic | 35.0% | |
| !!! | TGTTTTGAGAGCGATGAATT+TGG | + | chr1_2:47555672-47555691 | Msa0073700:intron | 35.0% |
| !! | CACATGCACACTTTTTAACT+GGG | + | chr1_2:47555720-47555739 | Msa0073700:intron | 35.0% |
| CTACTAATGAATTTAGCCTC+TGG | + | chr1_2:47556012-47556031 | Msa0073700:intron | 35.0% | |
| CAACGAAAAACATAGGTCAA+AGG | - | chr1_2:47556104-47556123 | None:intergenic | 35.0% | |
| ! | TGACCTATGTTTTTCGTTGA+TGG | + | chr1_2:47556105-47556124 | Msa0073700:intron | 35.0% |
| ATGCCATCAACGAAAAACAT+AGG | - | chr1_2:47556111-47556130 | None:intergenic | 35.0% | |
| TCATCTCATCCAACTAAGTT+TGG | - | chr1_2:47556412-47556431 | None:intergenic | 35.0% | |
| AGCACTAGTGTTAAGGAATT+TGG | - | chr1_2:47556453-47556472 | None:intergenic | 35.0% | |
| ATCATTGTTGTCGAACAAAC+TGG | + | chr1_2:47556474-47556493 | Msa0073700:intron | 35.0% | |
| GTTTACGGAAGCAAATAATG+AGG | + | chr1_2:47556641-47556660 | Msa0073700:intron | 35.0% | |
| ! | AAAGGTGCATTGTCTTATGT+GGG | + | chr1_2:47556664-47556683 | Msa0073700:intron | 35.0% |
| !!! | CGGGTTAGTTTTTTGGAATT+TGG | + | chr1_2:47556863-47556882 | Msa0073700:intron | 35.0% |
| !! | TTGTGAACTTTAAGGTACAC+TGG | - | chr1_2:47557344-47557363 | None:intergenic | 35.0% |
| TCTTCGCTTTCTTGTATTTG+AGG | + | chr1_2:47557369-47557388 | Msa0073700:intron | 35.0% | |
| CTGGCAGAAAACAAACAATA+TGG | - | chr1_2:47557507-47557526 | None:intergenic | 35.0% | |
| CTGCCAGTTATATCATCTTA+TGG | + | chr1_2:47557520-47557539 | Msa0073700:intron | 35.0% | |
| AAACTGTCAGTAGTGAAGAA+TGG | - | chr1_2:47557644-47557663 | None:intergenic | 35.0% | |
| TGAACAAAGAAAATAGCAGC+GGG | + | chr1_2:47557748-47557767 | Msa0073700:intron | 35.0% | |
| !! | GGCATTGATATATCCTTGTA+GGG | - | chr1_2:47557989-47558008 | None:intergenic | 35.0% |
| !! | AGGCATTGATATATCCTTGT+AGG | - | chr1_2:47557990-47558009 | None:intergenic | 35.0% |
| GAACGAACTCAAGTTATCAT+AGG | - | chr1_2:47558010-47558029 | None:intergenic | 35.0% | |
| !! | TGAGCTGATTAAGTTGAAAG+TGG | + | chr1_2:47558125-47558144 | Msa0073700:CDS | 35.0% |
| TGGATGAACATCATACTTTG+AGG | + | chr1_2:47558145-47558164 | Msa0073700:CDS | 35.0% | |
| !! | TTTTGTTTCCGCATTTGAAG+TGG | - | chr1_2:47558174-47558193 | None:intergenic | 35.0% |
| ATTGAAACATGGAAAACGGA+AGG | - | chr1_2:47558245-47558264 | None:intergenic | 35.0% | |
| ! | CCGTTTTCCATGTTTCAATT+TGG | + | chr1_2:47558246-47558265 | Msa0073700:intron | 35.0% |
| TTCTTGATGCAGCTATGTTA+AGG | + | chr1_2:47558337-47558356 | Msa0073700:intron | 35.0% | |
| TCTTGATGCAGCTATGTTAA+GGG | + | chr1_2:47558338-47558357 | Msa0073700:intron | 35.0% | |
| AAAAATTGAAGAGAGAGGTG+AGG | + | chr1_2:47558399-47558418 | Msa0073700:CDS | 35.0% | |
| TTGATGTGAAGGAAAGAGAA+AGG | + | chr1_2:47558474-47558493 | Msa0073700:CDS | 35.0% | |
| GGAAAGAGAAAGGTCTTTAA+TGG | + | chr1_2:47558484-47558503 | Msa0073700:CDS | 35.0% | |
| AGAAAGGTCTTTAATGGAGA+AGG | + | chr1_2:47558490-47558509 | Msa0073700:CDS | 35.0% | |
| CAAGAACATGCTTTCAAATC+TGG | + | chr1_2:47558557-47558576 | Msa0073700:CDS | 35.0% | |
| AAATCTGGACAACTAGGAAA+AGG | + | chr1_2:47558572-47558591 | Msa0073700:CDS | 35.0% | |
| AATCTGGACAACTAGGAAAA+GGG | + | chr1_2:47558573-47558592 | Msa0073700:CDS | 35.0% | |
| GGTTAAAGAGACTAGAACAT+CGG | + | chr1_2:47558706-47558725 | Msa0073700:intron | 35.0% | |
| TCTCCTTCAAATAATATGCG+GGG | - | chr1_2:47558741-47558760 | None:intergenic | 35.0% | |
| CTCTCCTTCAAATAATATGC+GGG | - | chr1_2:47558742-47558761 | None:intergenic | 35.0% | |
| TTTGAAGGAGAGAAACACAA+TGG | + | chr1_2:47558750-47558769 | Msa0073700:three_prime_UTR | 35.0% | |
| TCGATGATTTCGCCATTGTT+GGG | - | chr1_2:47549662-47549681 | None:intergenic | 40.0% | |
| TTCGATGATTTCGCCATTGT+TGG | - | chr1_2:47549663-47549682 | None:intergenic | 40.0% | |
| CTTCTTCTTCTTCTTCTTGC+TGG | - | chr1_2:47549712-47549731 | None:intergenic | 40.0% | |
| GAAAGGAGATACGAAACGAA+TGG | + | chr1_2:47549851-47549870 | Msa0073700:CDS | 40.0% | |
| AAGGAGATACGAAACGAATG+GGG | + | chr1_2:47549853-47549872 | Msa0073700:CDS | 40.0% | |
| !! | GTTCTCTTGCTATTGAGAAG+AGG | + | chr1_2:47549883-47549902 | Msa0073700:CDS | 40.0% |
| !!! | AAGCTATTTTGAGATCGCAG+CGG | + | chr1_2:47550006-47550025 | Msa0073700:CDS | 40.0% |
| ATAGCTGAAGACAGACAAAG+AGG | + | chr1_2:47550114-47550133 | Msa0073700:intron | 40.0% | |
| ! | TGTATGTTTGGTTGGTTACG+TGG | + | chr1_2:47550155-47550174 | Msa0073700:intron | 40.0% |
| GTCAGAATCAAGTCTAGAAG+TGG | + | chr1_2:47550694-47550713 | Msa0073700:intron | 40.0% | |
| CTGTTATCTTGGGGAACTTA+CGG | - | chr1_2:47550825-47550844 | None:intergenic | 40.0% | |
| !! | ACTTTAGGACCTGTTTGGAT+TGG | - | chr1_2:47551189-47551208 | None:intergenic | 40.0% |
| !! | CAATCACTTTAGGACCTGTT+TGG | - | chr1_2:47551194-47551213 | None:intergenic | 40.0% |
| ! | CTCGTTGGATGTTGATTGAA+AGG | - | chr1_2:47551292-47551311 | None:intergenic | 40.0% |
| GCTGCAAGATAAATTCTCGT+TGG | - | chr1_2:47551307-47551326 | None:intergenic | 40.0% | |
| TTGGTTACAAAGCAGACATG+CGG | - | chr1_2:47551336-47551355 | None:intergenic | 40.0% | |
| ! | AAGGAATTGATGGTCTTGGA+AGG | + | chr1_2:47551616-47551635 | Msa0073700:CDS | 40.0% |
| ! | AGGAATTGATGGTCTTGGAA+GGG | + | chr1_2:47551617-47551636 | Msa0073700:CDS | 40.0% |
| ! | GACTTTGAAGATGAGATGCT+TGG | + | chr1_2:47551642-47551661 | Msa0073700:CDS | 40.0% |
| ! | CTTTGAAGATGAGATGCTTG+GGG | + | chr1_2:47551644-47551663 | Msa0073700:CDS | 40.0% |
| CAGATATTTCAGATTTGGGC+TGG | + | chr1_2:47551959-47551978 | Msa0073700:intron | 40.0% | |
| TTCCCTAAAGTCACAGTAAC+AGG | - | chr1_2:47552054-47552073 | None:intergenic | 40.0% | |
| !! | GCTTTGAAGCTATTTCTGAC+TGG | + | chr1_2:47552197-47552216 | Msa0073700:intron | 40.0% |
| TTCGTTCATCACTTCCTTCT+TGG | - | chr1_2:47552248-47552267 | None:intergenic | 40.0% | |
| AGATAAGGACTTCACTTCTC+TGG | + | chr1_2:47552436-47552455 | Msa0073700:CDS | 40.0% | |
| GGTACCATTATTTATCCTCG+AGG | + | chr1_2:47552598-47552617 | Msa0073700:intron | 40.0% | |
| GAACCCTCGAGGATAAATAA+TGG | - | chr1_2:47552605-47552624 | None:intergenic | 40.0% | |
| TCCAACTTTCTCTTTATGGC+AGG | + | chr1_2:47552666-47552685 | Msa0073700:intron | 40.0% | |
| TCCTGCCATAAAGAGAAAGT+TGG | - | chr1_2:47552670-47552689 | None:intergenic | 40.0% | |
| TGACCAACTTGTCAGACAAT+TGG | + | chr1_2:47552705-47552724 | Msa0073700:CDS | 40.0% | |
| GACCAACTTGTCAGACAATT+GGG | + | chr1_2:47552706-47552725 | Msa0073700:CDS | 40.0% | |
| ATCCCAATTGTCTGACAAGT+TGG | - | chr1_2:47552711-47552730 | None:intergenic | 40.0% | |
| TTCAGATAGGCTGAAGACAA+CGG | + | chr1_2:47552750-47552769 | Msa0073700:CDS | 40.0% | |
| CATCAATCCTGCATTAAGCT+AGG | - | chr1_2:47553007-47553026 | None:intergenic | 40.0% | |
| TATAGTGTACTAGTGAGCCT+CGG | + | chr1_2:47553048-47553067 | Msa0073700:intron | 40.0% | |
| ! | CTTGGTGATAGTCATGGAAA+TGG | + | chr1_2:47553115-47553134 | Msa0073700:intron | 40.0% |
| ! | AATTTTACTCCCATGTGCAG+CGG | - | chr1_2:47553143-47553162 | None:intergenic | 40.0% |
| TGCACATGGGAGTAAAATTG+TGG | + | chr1_2:47553144-47553163 | Msa0073700:intron | 40.0% | |
| AGTTTCTTCATCGACAGAGA+AGG | - | chr1_2:47553341-47553360 | None:intergenic | 40.0% | |
| GATTCTTGAGAGAAGAGATG+AGG | + | chr1_2:47553387-47553406 | Msa0073700:CDS | 40.0% | |
| AGGTCTGAAGATTCTGATGA+AGG | + | chr1_2:47553463-47553482 | Msa0073700:CDS | 40.0% | |
| AGATTCTGATGAAGGATCTG+AGG | + | chr1_2:47553471-47553490 | Msa0073700:CDS | 40.0% | |
| ! | GATGATGATGATATCAGTGC+AGG | + | chr1_2:47553547-47553566 | Msa0073700:CDS | 40.0% |
| ! | AGAAGATGAAGATGATGACG+AGG | + | chr1_2:47553606-47553625 | Msa0073700:CDS | 40.0% |
| !! | AAGAGCTGCAGAAGTTGATA+AGG | + | chr1_2:47553636-47553655 | Msa0073700:CDS | 40.0% |
| ! | GGAAGTGTAAAGGGAGATAA+TGG | + | chr1_2:47553712-47553731 | Msa0073700:CDS | 40.0% |
| GATACCAAGAAGATAGTCGT+TGG | + | chr1_2:47553742-47553761 | Msa0073700:CDS | 40.0% | |
| ! | TTTTCTGCAGCAAGTGTGAT+CGG | - | chr1_2:47553904-47553923 | None:intergenic | 40.0% |
| TTCTCGTGTAAAACAGTTGG+TGG | - | chr1_2:47554019-47554038 | None:intergenic | 40.0% | |
| CACTTCTCGTGTAAAACAGT+TGG | - | chr1_2:47554022-47554041 | None:intergenic | 40.0% | |
| ATATGGTACACAGCTAACAG+GGG | + | chr1_2:47554278-47554297 | Msa0073700:intron | 40.0% | |
| ! | CTGAGTATTGCAAACTGGAT+TGG | - | chr1_2:47554590-47554609 | None:intergenic | 40.0% |
| GCACATATTGCAGCAAAGTA+TGG | - | chr1_2:47554865-47554884 | None:intergenic | 40.0% | |
| ATCGGAACATGGAAATACCA+TGG | - | chr1_2:47555108-47555127 | None:intergenic | 40.0% | |
| ! | GGATGTCTAAAATCGGAACA+TGG | - | chr1_2:47555119-47555138 | None:intergenic | 40.0% |
| AGTATCACAGGAGTCATAAC+TGG | - | chr1_2:47555140-47555159 | None:intergenic | 40.0% | |
| TCGCACATCAATAGTATCAC+AGG | - | chr1_2:47555152-47555171 | None:intergenic | 40.0% | |
| TATCACGGCCAGATGTTATT+GGG | - | chr1_2:47555190-47555209 | None:intergenic | 40.0% | |
| ATATCACGGCCAGATGTTAT+TGG | - | chr1_2:47555191-47555210 | None:intergenic | 40.0% | |
| AAGAACCAACGGCAATATCA+CGG | - | chr1_2:47555205-47555224 | None:intergenic | 40.0% | |
| TATAGGCCAAATATCTTCCG+CGG | + | chr1_2:47555300-47555319 | Msa0073700:intron | 40.0% | |
| ATGTCTAACTTAAAGGACCG+CGG | - | chr1_2:47555320-47555339 | None:intergenic | 40.0% | |
| CTCTCAAAACAAGGGTTCAT+AGG | - | chr1_2:47555663-47555682 | None:intergenic | 40.0% | |
| ! | CCAGTTAAAAAGTGTGCATG+TGG | - | chr1_2:47555722-47555741 | None:intergenic | 40.0% |
| !! | CCACATGCACACTTTTTAAC+TGG | + | chr1_2:47555719-47555738 | Msa0073700:intron | 40.0% |
| CATCTAACTTAAAGGACTGC+AGG | + | chr1_2:47555834-47555853 | Msa0073700:intron | 40.0% | |
| !!! | GGTAGGATGCCACTTTTTAA+TGG | - | chr1_2:47555957-47555976 | None:intergenic | 40.0% |
| CGGAAGCAAATAATGAGGAA+AGG | + | chr1_2:47556646-47556665 | Msa0073700:intron | 40.0% | |
| ! | GAAAGGTGCATTGTCTTATG+TGG | + | chr1_2:47556663-47556682 | Msa0073700:intron | 40.0% |
| ATTCAGCAAGCAAATCAACG+AGG | - | chr1_2:47556698-47556717 | None:intergenic | 40.0% | |
| TAAGCAGAGATCAGGTAGTA+AGG | - | chr1_2:47556734-47556753 | None:intergenic | 40.0% | |
| TGCTTAACCTACGTCTCTAA+TGG | + | chr1_2:47556748-47556767 | Msa0073700:intron | 40.0% | |
| AGGCTGTGCAAGGTTTAAAT+GGG | + | chr1_2:47556818-47556837 | Msa0073700:intron | 40.0% | |
| TATCATGCAGGAACTAGCTA+AGG | - | chr1_2:47557416-47557435 | None:intergenic | 40.0% | |
| !! | TATGGTGCTGTACTTCATGA+TGG | + | chr1_2:47557450-47557469 | Msa0073700:intron | 40.0% |
| ATGATGGCACCAGAATGTTA+TGG | + | chr1_2:47557466-47557485 | Msa0073700:intron | 40.0% | |
| TCCTCATTAATGCGCAATAG+TGG | - | chr1_2:47557563-47557582 | None:intergenic | 40.0% | |
| TCTTCACTACTGACAGTTTC+AGG | + | chr1_2:47557645-47557664 | Msa0073700:CDS | 40.0% | |
| GAACAAAGAAAATAGCAGCG+GGG | + | chr1_2:47557749-47557768 | Msa0073700:intron | 40.0% | |
| TATGGATGCAGCTAATGTTG+AGG | + | chr1_2:47557848-47557867 | Msa0073700:intron | 40.0% | |
| TTAGCCAGTCAGATCAGAAA+GGG | + | chr1_2:47558281-47558300 | Msa0073700:intron | 40.0% | |
| CTACTTCTTGCTTGATGTGA+AGG | + | chr1_2:47558463-47558482 | Msa0073700:CDS | 40.0% | |
| AAGCATGTTCTTGCTCTTGA+AGG | - | chr1_2:47558550-47558569 | None:intergenic | 40.0% | |
| GCTTTCAAATCTGGACAACT+AGG | + | chr1_2:47558566-47558585 | Msa0073700:CDS | 40.0% | |
| GATCCCCGCATATTATTTGA+AGG | + | chr1_2:47558735-47558754 | Msa0073700:three_prime_UTR | 40.0% | |
| !!! | GTTTGGTTTTGAGCGGTAGA+GGG | - | chr1_2:47549638-47549657 | None:intergenic | 45.0% |
| CAAAACCAAACCCCCAACAA+TGG | + | chr1_2:47549647-47549666 | Msa0073700:exon | 45.0% | |
| GATGATTTCGCCATTGTTGG+GGG | - | chr1_2:47549660-47549679 | None:intergenic | 45.0% | |
| CGATGATTTCGCCATTGTTG+GGG | - | chr1_2:47549661-47549680 | None:intergenic | 45.0% | |
| CTTCTTCTTCTTCTTGCTGG+TGG | - | chr1_2:47549709-47549728 | None:intergenic | 45.0% | |
| TGCTTTCATGGCTACTGCTT+CGG | - | chr1_2:47549754-47549773 | None:intergenic | 45.0% | |
| !! | GTGACCAGATTGACTCGAAT+GGG | - | chr1_2:47549800-47549819 | None:intergenic | 45.0% |
| !! | TCGAAGTAATGGGTCAGAAG+CGG | + | chr1_2:47549829-47549848 | Msa0073700:CDS | 45.0% |
| AGATACGAAACGAATGGGGT+TGG | + | chr1_2:47549857-47549876 | Msa0073700:CDS | 45.0% | |
| !!! | AGCTATTTTGAGATCGCAGC+GGG | + | chr1_2:47550007-47550026 | Msa0073700:CDS | 45.0% |
| AGACAGACAAAGAGGCTGTT+TGG | + | chr1_2:47550122-47550141 | Msa0073700:intron | 45.0% | |
| ! | ATGTTTGGTTGGTTACGTGG+TGG | + | chr1_2:47550158-47550177 | Msa0073700:intron | 45.0% |
| TGGTTACAAAGCAGACATGC+GGG | - | chr1_2:47551335-47551354 | None:intergenic | 45.0% | |
| AGGCCTGTTACTGTGACTTT+AGG | + | chr1_2:47552048-47552067 | Msa0073700:intron | 45.0% | |
| GGCCTGTTACTGTGACTTTA+GGG | + | chr1_2:47552049-47552068 | Msa0073700:intron | 45.0% | |
| GGAAAAAGATGAAGACCTGC+TGG | + | chr1_2:47552406-47552425 | Msa0073700:CDS | 45.0% | |
| AAAGATGAAGACCTGCTGGA+AGG | + | chr1_2:47552410-47552429 | Msa0073700:CDS | 45.0% | |
| CCTTATCTAATCCTTCCAGC+AGG | - | chr1_2:47552424-47552443 | None:intergenic | 45.0% | |
| CCTGCTGGAAGGATTAGATA+AGG | + | chr1_2:47552421-47552440 | Msa0073700:CDS | 45.0% | |
| !! | GATGAAAGCTTTGAAGGCTC+TGG | + | chr1_2:47552499-47552518 | Msa0073700:CDS | 45.0% |
| GTTGTCTTCAGCCTATCTGA+AGG | - | chr1_2:47552751-47552770 | None:intergenic | 45.0% | |
| AAGAGAACGTCTAGAGGAGT+TGG | + | chr1_2:47552792-47552811 | Msa0073700:CDS | 45.0% | |
| GCCAACAATCTTGCAAGTGA+CGG | - | chr1_2:47553079-47553098 | None:intergenic | 45.0% | |
| !! | ATTGTTGGCTTGTAACCCTG+TGG | + | chr1_2:47553090-47553109 | Msa0073700:intron | 45.0% |
| GACTATCACCAAGATCCACA+GGG | - | chr1_2:47553108-47553127 | None:intergenic | 45.0% | |
| TGACTATCACCAAGATCCAC+AGG | - | chr1_2:47553109-47553128 | None:intergenic | 45.0% | |
| ! | GTGGATCTTGGTGATAGTCA+TGG | + | chr1_2:47553109-47553128 | Msa0073700:intron | 45.0% |
| ! | ATTTTACTCCCATGTGCAGC+GGG | - | chr1_2:47553142-47553161 | None:intergenic | 45.0% |
| TTCACTCGAATCTTCAGCAG+CGG | - | chr1_2:47553245-47553264 | None:intergenic | 45.0% | |
| GAGAAACCAAGATCTCTCTC+TGG | + | chr1_2:47553298-47553317 | Msa0073700:CDS | 45.0% | |
| TCATCACCAGAGAGAGATCT+TGG | - | chr1_2:47553307-47553326 | None:intergenic | 45.0% | |
| TCTTGAGAGAAGAGATGAGG+AGG | + | chr1_2:47553390-47553409 | Msa0073700:CDS | 45.0% | |
| GATATCAGTGCAGGTTCAGA+AGG | + | chr1_2:47553556-47553575 | Msa0073700:CDS | 45.0% | |
| TGCTCCAACGACTATCTTCT+TGG | - | chr1_2:47553749-47553768 | None:intergenic | 45.0% | |
| ! | ACACGAGAAGTGTGATCTCT+TGG | + | chr1_2:47554030-47554049 | Msa0073700:intron | 45.0% |
| TATGGTACACAGCTAACAGG+GGG | + | chr1_2:47554279-47554298 | Msa0073700:intron | 45.0% | |
| CTATCACAGAAAGTAGCAGC+TGG | + | chr1_2:47555045-47555064 | Msa0073700:intron | 45.0% | |
| ! | AGACACAGCGTCTTTGAAGA+AGG | - | chr1_2:47555071-47555090 | None:intergenic | 45.0% |
| ATGCGTTGCCCAATAACATC+TGG | + | chr1_2:47555179-47555198 | Msa0073700:CDS | 45.0% | |
| ! | AGAAAGTAACTTGCCACACG+AGG | - | chr1_2:47555258-47555277 | None:intergenic | 45.0% |
| AAAGGACCGCGGAAGATATT+TGG | - | chr1_2:47555309-47555328 | None:intergenic | 45.0% | |
| CTAACTTAAAGGACTGCAGG+TGG | + | chr1_2:47555837-47555856 | Msa0073700:intron | 45.0% | |
| AAAGGACTGCAGGTGGTATT+TGG | + | chr1_2:47555844-47555863 | Msa0073700:intron | 45.0% | |
| ! | TCTTAGAAAGCACAGACCAG+AGG | - | chr1_2:47556031-47556050 | None:intergenic | 45.0% |
| ACCTCCTCATCTTTGTGTGT+TGG | + | chr1_2:47556380-47556399 | Msa0073700:intron | 45.0% | |
| TGGCGTCTTCCAAACTTAGT+TGG | + | chr1_2:47556400-47556419 | Msa0073700:intron | 45.0% | |
| !! | TCGAACAAACTGGTGTTGCT+TGG | + | chr1_2:47556484-47556503 | Msa0073700:intron | 45.0% |
| ACGTAGGTTAAGCAGAGATC+AGG | - | chr1_2:47556742-47556761 | None:intergenic | 45.0% | |
| TTACTGAAAAAGGGGAGCAG+AGG | + | chr1_2:47556794-47556813 | Msa0073700:intron | 45.0% | |
| CAGGCTGTGCAAGGTTTAAA+TGG | + | chr1_2:47556817-47556836 | Msa0073700:intron | 45.0% | |
| TGGCACCAGAATGTTATGGT+TGG | + | chr1_2:47557470-47557489 | Msa0073700:intron | 45.0% | |
| GCCACTATTGCGCATTAATG+AGG | + | chr1_2:47557559-47557578 | Msa0073700:CDS | 45.0% | |
| GTGAAGAATGGAGAGTCTTC+AGG | - | chr1_2:47557632-47557651 | None:intergenic | 45.0% | |
| ACCTCTGTTGAAACCCTACA+AGG | + | chr1_2:47557973-47557992 | Msa0073700:CDS | 45.0% | |
| TCCTTGTAGGGTTTCAACAG+AGG | - | chr1_2:47557977-47557996 | None:intergenic | 45.0% | |
| CTTAGCCAGTCAGATCAGAA+AGG | + | chr1_2:47558280-47558299 | Msa0073700:intron | 45.0% | |
| AGTTCCCTTTCTGATCTGAC+TGG | - | chr1_2:47558288-47558307 | None:intergenic | 45.0% | |
| AAGGCAAGAGCTGAGAAGTA+TGG | + | chr1_2:47558509-47558528 | Msa0073700:CDS | 45.0% | |
| ! | CAAGAGCTGAGAAGTATGGA+AGG | + | chr1_2:47558513-47558532 | Msa0073700:CDS | 45.0% |
| !!! | GGTTTGGTTTTGAGCGGTAG+AGG | - | chr1_2:47549639-47549658 | None:intergenic | 50.0% |
| !!! | GTTGGGGGTTTGGTTTTGAG+CGG | - | chr1_2:47549645-47549664 | None:intergenic | 50.0% |
| TTTCGCCATTGTTGGGGGTT+TGG | - | chr1_2:47549655-47549674 | None:intergenic | 50.0% | |
| CTTCTTCTTCTTGCTGGTGG+TGG | - | chr1_2:47549706-47549725 | None:intergenic | 50.0% | |
| GCTTTCATGGCTACTGCTTC+GGG | - | chr1_2:47549753-47549772 | None:intergenic | 50.0% | |
| GCAACCCATTCGAGTCAATC+TGG | + | chr1_2:47549793-47549812 | Msa0073700:CDS | 50.0% | |
| !! | CGTGACCAGATTGACTCGAA+TGG | - | chr1_2:47549801-47549820 | None:intergenic | 50.0% |
| TCGAGTCAATCTGGTCACGT+AGG | + | chr1_2:47549802-47549821 | Msa0073700:CDS | 50.0% | |
| !! | GTAATGGGTCAGAAGCGGAA+AGG | + | chr1_2:47549834-47549853 | Msa0073700:CDS | 50.0% |
| CTCATGGTATGCAGAGTCCA+GGG | + | chr1_2:47551992-47552011 | Msa0073700:CDS | 50.0% | |
| TCATGGTATGCAGAGTCCAG+GGG | + | chr1_2:47551993-47552012 | Msa0073700:CDS | 50.0% | |
| CTGACGGTGGGGAAAATGTA+AGG | + | chr1_2:47552028-47552047 | Msa0073700:CDS | 50.0% | |
| TGGTTCAGTCAGAGACAGCA+AGG | - | chr1_2:47552474-47552493 | None:intergenic | 50.0% | |
| GACAACGGAAGAGATTGCTC+AGG | + | chr1_2:47552765-47552784 | Msa0073700:CDS | 50.0% | |
| AACGGAAGAGATTGCTCAGG+AGG | + | chr1_2:47552768-47552787 | Msa0073700:CDS | 50.0% | |
| GGAGGAAAGAGAACGTCTAG+AGG | + | chr1_2:47552786-47552805 | Msa0073700:CDS | 50.0% | |
| AGAACGTCTAGAGGAGTTGG+AGG | + | chr1_2:47552795-47552814 | Msa0073700:CDS | 50.0% | |
| GCCGTCACTTGCAAGATTGT+TGG | + | chr1_2:47553075-47553094 | Msa0073700:intron | 50.0% | |
| GCTTGTAACCCTGTGGATCT+TGG | + | chr1_2:47553097-47553116 | Msa0073700:intron | 50.0% | |
| ! | TCTCTCTCTGGTGATGACCT+TGG | + | chr1_2:47553310-47553329 | Msa0073700:CDS | 50.0% |
| TGAGAGAAGAGATGAGGAGG+AGG | + | chr1_2:47553393-47553412 | Msa0073700:CDS | 50.0% | |
| GAGAGAAGAGATGAGGAGGA+GGG | + | chr1_2:47553394-47553413 | Msa0073700:CDS | 50.0% | |
| ! | ATGTAGAAAGCACGTGCCTG+TGG | + | chr1_2:47554543-47554562 | Msa0073700:intron | 50.0% |
| TCTCTTGCGATTGTGGTCCA+TGG | + | chr1_2:47555088-47555107 | Msa0073700:CDS | 50.0% | |
| CTCTCTGTAAGTACCTCGTG+TGG | + | chr1_2:47555242-47555261 | Msa0073700:intron | 50.0% | |
| GCCAACACACAAAGATGAGG+AGG | - | chr1_2:47556384-47556403 | None:intergenic | 50.0% | |
| GACGCCAACACACAAAGATG+AGG | - | chr1_2:47556387-47556406 | None:intergenic | 50.0% | |
| TGAGGCGACCACTTCAAATG+CGG | + | chr1_2:47558163-47558182 | Msa0073700:CDS | 50.0% | |
| AGGTGAGGCGTGAAGCTAAA+GGG | + | chr1_2:47558414-47558433 | Msa0073700:CDS | 50.0% | |
| !! | GTTTTGAGCGGTAGAGGGTG+TGG | - | chr1_2:47549633-47549652 | None:intergenic | 55.0% |
| TCGAAACGCAGCATCGCCAA+CGG | + | chr1_2:47549678-47549697 | Msa0073700:CDS | 55.0% | |
| GGCTGGCGTCATAATGCTCA+TGG | + | chr1_2:47551976-47551995 | Msa0073700:CDS | 55.0% | |
| GCTCATGGTATGCAGAGTCC+AGG | + | chr1_2:47551991-47552010 | Msa0073700:CDS | 55.0% | |
| ! | CACTTCTCTGGCTCATTCCG+AGG | + | chr1_2:47552448-47552467 | Msa0073700:CDS | 55.0% |
| AGTCAGAGACAGCAAGGCCT+CGG | - | chr1_2:47552468-47552487 | None:intergenic | 55.0% | |
| TGCGTGCTCGTCCTTCAGAT+AGG | + | chr1_2:47552737-47552756 | Msa0073700:CDS | 55.0% | |
| CGACAGAGAAGGAATCGCCA+AGG | - | chr1_2:47553330-47553349 | None:intergenic | 55.0% | |
| CGCTGTGTCTCTTGCGATTG+TGG | + | chr1_2:47555081-47555100 | Msa0073700:CDS | 55.0% | |
| TCTGGCCGTGATATTGCCGT+TGG | + | chr1_2:47555197-47555216 | Msa0073700:intron | 55.0% | |
| TGAAAAAGGGGAGCAGAGGC+AGG | + | chr1_2:47556798-47556817 | Msa0073700:intron | 55.0% | |
| CTTTCAGCTCGCTCACTGTC+TGG | - | chr1_2:47558377-47558396 | None:intergenic | 55.0% | |
| GAGGTGAGGCGTGAAGCTAA+AGG | + | chr1_2:47558413-47558432 | Msa0073700:CDS | 55.0% | |
| GGTGAGGCGTGAAGCTAAAG+GGG | + | chr1_2:47558415-47558434 | Msa0073700:CDS | 55.0% | |
| ! | GGTAGAGGGTGTGGTGGAGA+AGG | - | chr1_2:47549624-47549643 | None:intergenic | 60.0% |
| ! | TTGAGCGGTAGAGGGTGTGG+TGG | - | chr1_2:47549630-47549649 | None:intergenic | 60.0% |
| !! | CTTGCTGGTGGTGGTTCCGT+TGG | - | chr1_2:47549697-47549716 | None:intergenic | 60.0% |
| TGGTATGCAGAGTCCAGGGG+AGG | + | chr1_2:47551996-47552015 | Msa0073700:CDS | 60.0% | |
| !! | AGGCTGGTCTAGCTGACGGT+GGG | + | chr1_2:47552016-47552035 | Msa0073700:CDS | 60.0% |
| CAGGGCAAGAAGAACCCTCG+AGG | - | chr1_2:47552616-47552635 | None:intergenic | 60.0% | |
| TGCAAGTGACGGCATTGCCG+AGG | - | chr1_2:47553068-47553087 | None:intergenic | 60.0% | |
| GAAATGGGCCCGCTGCACAT+GGG | + | chr1_2:47553131-47553150 | Msa0073700:intron | 60.0% | |
| GAGATCGCAGCGGGAACGTC+AGG | + | chr1_2:47550016-47550035 | Msa0073700:CDS | 65.0% | |
| ATGCAGAGTCCAGGGGAGGC+TGG | + | chr1_2:47552000-47552019 | Msa0073700:CDS | 65.0% | |
| TCAGCTAGACCAGCCTCCCC+TGG | - | chr1_2:47552012-47552031 | None:intergenic | 65.0% | |
| !! | GGGGAGGCTGGTCTAGCTGA+CGG | + | chr1_2:47552012-47552031 | Msa0073700:CDS | 65.0% |
| !! | GAGGCTGGTCTAGCTGACGG+TGG | + | chr1_2:47552015-47552034 | Msa0073700:CDS | 65.0% |
| !! | GGCTGGTCTAGCTGACGGTG+GGG | + | chr1_2:47552017-47552036 | Msa0073700:CDS | 65.0% |
| GGAAATGGGCCCGCTGCACA+TGG | + | chr1_2:47553130-47553149 | Msa0073700:intron | 65.0% | |
| GAGCAGAGGCAGGCTGTGCA+AGG | + | chr1_2:47556808-47556827 | Msa0073700:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 47549527 | 47558873 | 47549527 | ID=Msa0073700;Name=Msa0073700 |
| chr1_2 | mRNA | 47549527 | 47558873 | 47549527 | ID=Msa0073700-mRNA-1;Parent=Msa0073700;Name=Msa0073700-mRNA-1;_AED=0.05;_eAED=0.05;_QI=139|0.84|0.85|1|0.76|0.78|14|238|956 |
| chr1_2 | exon | 47549527 | 47550037 | 47549527 | ID=Msa0073700-mRNA-1:exon:14460;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47551552 | 47551687 | 47551552 | ID=Msa0073700-mRNA-1:exon:14461;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47551962 | 47552059 | 47551962 | ID=Msa0073700-mRNA-1:exon:14462;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47552235 | 47552294 | 47552235 | ID=Msa0073700-mRNA-1:exon:14463;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47552386 | 47552598 | 47552386 | ID=Msa0073700-mRNA-1:exon:14464;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47552688 | 47552816 | 47552688 | ID=Msa0073700-mRNA-1:exon:14465;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47553220 | 47553939 | 47553220 | ID=Msa0073700-mRNA-1:exon:14466;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47554748 | 47554940 | 47554748 | ID=Msa0073700-mRNA-1:exon:14467;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47555054 | 47555214 | 47555054 | ID=Msa0073700-mRNA-1:exon:14468;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47556168 | 47556272 | 47556168 | ID=Msa0073700-mRNA-1:exon:14469;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47557527 | 47557666 | 47557527 | ID=Msa0073700-mRNA-1:exon:14470;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47557957 | 47558235 | 47557957 | ID=Msa0073700-mRNA-1:exon:14471;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47558349 | 47558693 | 47558349 | ID=Msa0073700-mRNA-1:exon:14472;Parent=Msa0073700-mRNA-1 |
| chr1_2 | exon | 47558716 | 47558873 | 47558716 | ID=Msa0073700-mRNA-1:exon:14473;Parent=Msa0073700-mRNA-1 |
| chr1_2 | five_prime_UTR | 47549527 | 47549665 | 47549527 | ID=Msa0073700-mRNA-1:five_prime_utr;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47549666 | 47550037 | 47549666 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47551552 | 47551687 | 47551552 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47551962 | 47552059 | 47551962 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47552235 | 47552294 | 47552235 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47552386 | 47552598 | 47552386 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47552688 | 47552816 | 47552688 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47553220 | 47553939 | 47553220 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47554748 | 47554940 | 47554748 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47555054 | 47555214 | 47555054 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47556168 | 47556272 | 47556168 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47557527 | 47557666 | 47557527 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47557957 | 47558235 | 47557957 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | CDS | 47558349 | 47558613 | 47558349 | ID=Msa0073700-mRNA-1:cds;Parent=Msa0073700-mRNA-1 |
| chr1_2 | three_prime_UTR | 47558614 | 47558693 | 47558614 | ID=Msa0073700-mRNA-1:three_prime_utr;Parent=Msa0073700-mRNA-1 |
| chr1_2 | three_prime_UTR | 47558716 | 47558873 | 47558716 | ID=Msa0073700-mRNA-1:three_prime_utr;Parent=Msa0073700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
