Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066460 | XP_003623882.1 | 98.563 | 348 | 5 | 0 | 1 | 348 | 254 | 601 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066460 | sp|Q8L7K9|MAO2_ARATH | 77.011 | 348 | 77 | 1 | 1 | 348 | 263 | 607 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066460 | G7L3I0 | 98.563 | 348 | 5 | 0 | 1 | 348 | 254 | 601 | 0.0 | 709 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024650 | Msa1066460 | 0.809757 | 1.615619e-50 | -8.615850e-47 |
| Msa0036550 | Msa1066460 | 0.807347 | 5.285019e-50 | -8.615850e-47 |
| Msa0038010 | Msa1066460 | 0.802242 | 6.155150e-49 | -8.615850e-47 |
| Msa0042240 | Msa1066460 | -0.801914 | 7.190016e-49 | -8.615850e-47 |
| Msa0060410 | Msa1066460 | 0.814095 | 1.834308e-51 | -8.615850e-47 |
| Msa0086620 | Msa1066460 | -0.802276 | 6.058609e-49 | -8.615850e-47 |
| Msa0120450 | Msa1066460 | 0.800140 | 1.657516e-48 | -8.615850e-47 |
| Msa0732970 | Msa1066460 | 0.836676 | 8.136653e-57 | -8.615850e-47 |
| Msa0773960 | Msa1066460 | 0.813124 | 2.999536e-51 | -8.615850e-47 |
| Msa0132250 | Msa1066460 | 0.810440 | 1.151716e-50 | -8.615850e-47 |
| Msa0137010 | Msa1066460 | -0.806298 | 8.802122e-50 | -8.615850e-47 |
| Msa0206370 | Msa1066460 | 0.800469 | 1.420190e-48 | -8.615850e-47 |
| Msa0234150 | Msa1066460 | 0.816553 | 5.211714e-52 | -8.615850e-47 |
| Msa0370620 | Msa1066460 | 0.814295 | 1.656980e-51 | -8.615850e-47 |
| Msa0454160 | Msa1066460 | 0.822500 | 2.292000e-53 | -8.615850e-47 |
| Msa0477900 | Msa1066460 | 0.806656 | 7.398094e-50 | -8.615850e-47 |
| Msa1036020 | Msa1066460 | 0.810688 | 1.017962e-50 | -8.615850e-47 |
| Msa1042300 | Msa1066460 | 0.812372 | 4.383448e-51 | -8.615850e-47 |
| Msa1066460 | Msa1076280 | 0.823823 | 1.125463e-53 | -8.615850e-47 |
| Msa1066460 | Msa1100330 | 0.805157 | 1.528735e-49 | -8.615850e-47 |
| Msa1066460 | Msa1111910 | 0.815142 | 1.075706e-51 | -8.615850e-47 |
| Msa1066460 | Msa1115600 | 0.899098 | 2.773496e-77 | -8.615850e-47 |
| Msa1066460 | Msa1184680 | 0.802207 | 6.259305e-49 | -8.615850e-47 |
| Msa1066460 | Msa1197720 | 0.814501 | 1.492017e-51 | -8.615850e-47 |
| Msa1066460 | Msa1203650 | 0.803246 | 3.820363e-49 | -8.615850e-47 |
| Msa1066460 | Msa1215220 | -0.815472 | 9.084798e-52 | -8.615850e-47 |
| Msa1066460 | Msa1255710 | 0.825285 | 5.095348e-54 | -8.615850e-47 |
| Msa1066460 | Msa1255740 | 0.804342 | 2.262426e-49 | -8.615850e-47 |
| Msa1066460 | Msa1267880 | 0.856650 | 2.786829e-62 | -8.615850e-47 |
| Msa1066460 | Msa1273320 | 0.815476 | 9.064361e-52 | -8.615850e-47 |
| Msa1066460 | Msa1295210 | -0.802093 | 6.605525e-49 | -8.615850e-47 |
| Msa1066460 | Msa1357840 | 0.813906 | 2.019515e-51 | -8.615850e-47 |
| Msa1066460 | Msa1387480 | 0.815578 | 8.603392e-52 | -8.615850e-47 |
| Msa1066460 | Msa1395720 | 0.811144 | 8.107855e-51 | -8.615850e-47 |
| Msa1066460 | Msa1441450 | 0.827133 | 1.850828e-54 | -8.615850e-47 |
| Msa1066460 | Msa1450630 | -0.824785 | 6.685501e-54 | -8.615850e-47 |
| Msa1066460 | Msa1461770 | 0.902084 | 1.390395e-78 | -8.615850e-47 |
| Msa0258910 | Msa1066460 | 0.803822 | 2.901950e-49 | -8.615850e-47 |
| Msa0269240 | Msa1066460 | 0.813582 | 2.379720e-51 | -8.615850e-47 |
| Msa0270390 | Msa1066460 | 0.823578 | 1.284441e-53 | -8.615850e-47 |
| Msa0279810 | Msa1066460 | 0.826717 | 2.326804e-54 | -8.615850e-47 |
| Msa0287480 | Msa1066460 | 0.814787 | 1.289525e-51 | -8.615850e-47 |
| Msa0298400 | Msa1066460 | 0.804719 | 1.887016e-49 | -8.615850e-47 |
| Msa0309120 | Msa1066460 | 0.830970 | 2.175305e-55 | -8.615850e-47 |
| Msa0319220 | Msa1066460 | 0.819513 | 1.116352e-52 | -8.615850e-47 |
| Msa0361700 | Msa1066460 | 0.817864 | 2.643147e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066460 | MtrunA17_Chr7g0247001 | 98.563 | 348 | 5 | 0 | 1 | 348 | 254 | 601 | 0.0 | 709 |
| Msa1066460 | MtrunA17_Chr8g0349861 | 84.195 | 348 | 55 | 0 | 1 | 348 | 257 | 604 | 0.0 | 619 |
| Msa1066460 | MtrunA17_Chr8g0337031 | 62.323 | 353 | 128 | 2 | 1 | 348 | 275 | 627 | 3.85e-160 | 462 |
| Msa1066460 | MtrunA17_Chr3g0140501 | 37.791 | 344 | 189 | 8 | 1 | 341 | 253 | 574 | 4.97e-60 | 202 |
| Msa1066460 | MtrunA17_Chr8g0389961 | 37.209 | 344 | 191 | 8 | 1 | 341 | 266 | 587 | 3.40e-59 | 200 |
| Msa1066460 | MtrunA17_Chr2g0331051 | 36.471 | 340 | 194 | 6 | 10 | 348 | 326 | 644 | 3.82e-58 | 199 |
| Msa1066460 | MtrunA17_Chr8g0340671 | 34.626 | 361 | 186 | 7 | 10 | 341 | 273 | 612 | 3.06e-52 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066460 | AT4G00570.1 | 77.011 | 348 | 77 | 1 | 1 | 348 | 263 | 607 | 0.0 | 562 |
| Msa1066460 | AT2G13560.1 | 61.080 | 352 | 132 | 2 | 1 | 347 | 270 | 621 | 8.84e-159 | 459 |
| Msa1066460 | AT5G25880.1 | 40.864 | 301 | 166 | 5 | 10 | 309 | 273 | 562 | 2.98e-65 | 217 |
| Msa1066460 | AT5G25880.2 | 41.237 | 291 | 159 | 5 | 10 | 299 | 273 | 552 | 3.37e-65 | 216 |
| Msa1066460 | AT2G19900.2 | 39.550 | 311 | 175 | 6 | 1 | 309 | 157 | 456 | 1.05e-60 | 202 |
| Msa1066460 | AT2G19900.1 | 39.550 | 311 | 175 | 6 | 1 | 309 | 256 | 555 | 5.29e-60 | 202 |
| Msa1066460 | AT5G11670.1 | 37.838 | 333 | 185 | 6 | 10 | 341 | 273 | 584 | 2.19e-58 | 198 |
| Msa1066460 | AT1G79750.1 | 38.438 | 333 | 183 | 8 | 10 | 341 | 331 | 642 | 9.95e-58 | 198 |
| Msa1066460 | AT5G25880.3 | 38.776 | 196 | 109 | 4 | 10 | 204 | 273 | 458 | 6.30e-35 | 134 |
Find 111 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGTGCTGCTTGGATTATC+TGG | 0.113987 | 7_2:+60489411 | Msa1066460:CDS |
| ACTTATGGCGATATCGTTTC+AGG | 0.192298 | 7_2:-60488255 | None:intergenic |
| TGACATATGTTCAAGTTCTT+TGG | 0.224805 | 7_2:-60490965 | None:intergenic |
| CTGATTACACAAACAATTTA+CGG | 0.227894 | 7_2:-60491435 | None:intergenic |
| ATTCATGACTGACAAGGTTT+AGG | 0.281819 | 7_2:+60491344 | Msa1066460:three_prime_UTR |
| TTCATGACTGACAAGGTTTA+GGG | 0.295509 | 7_2:+60491345 | Msa1066460:three_prime_UTR |
| GGGAGTTGAAGGTCGAATAA+TGG | 0.298113 | 7_2:+60491365 | Msa1066460:three_prime_UTR |
| CGTTGCACTTGCTGGACTAC+TGG | 0.299170 | 7_2:+60488431 | Msa1066460:CDS |
| ACAGCTGGCGTTGCACTTGC+TGG | 0.315085 | 7_2:+60488423 | Msa1066460:CDS |
| TTTCAAAAGCCCACTTCATT+TGG | 0.315449 | 7_2:-60488231 | None:intergenic |
| ATATTTCAATTTCAATCTAA+TGG | 0.325163 | 7_2:+60491563 | Msa1066460:three_prime_UTR |
| CATTAAACATGCAAAACTTA+TGG | 0.341246 | 7_2:-60488270 | None:intergenic |
| CCGACTTGCAGTGCAGGGCT+TGG | 0.342463 | 7_2:+60488670 | Msa1066460:intron |
| ACAGAGGAAGATATCCAAAA+AGG | 0.365695 | 7_2:+60490618 | Msa1066460:CDS |
| CAAGCAGTTTCAAGGATGTC+TGG | 0.367296 | 7_2:+60488712 | Msa1066460:CDS |
| CACCCTCTGCAAGCCCTTCA+AGG | 0.371484 | 7_2:-60489176 | None:intergenic |
| GGATTCAACTCAGGTTCTTA+AGG | 0.385894 | 7_2:+60489563 | Msa1066460:intron |
| CATGTTTAATGATGATATAC+AGG | 0.395861 | 7_2:+60488282 | Msa1066460:CDS |
| TACAAACAAACCATTCATAG+TGG | 0.405170 | 7_2:-60489637 | None:intergenic |
| TTCCATTTCAGGATTGGCTT+GGG | 0.407818 | 7_2:+60490121 | Msa1066460:intron |
| TTAGCAAATGGAACTGCAGC+TGG | 0.409092 | 7_2:-60489141 | None:intergenic |
| TATAACAGATGGAATGTTGC+AGG | 0.412434 | 7_2:+60490168 | Msa1066460:CDS |
| GTCTATTGTGGATGAATTCA+TGG | 0.414257 | 7_2:+60488084 | Msa1066460:exon |
| ACAATTTACGGCTGCAACAA+AGG | 0.416780 | 7_2:-60491423 | None:intergenic |
| TCTTGTATCCATCCATTGAT+AGG | 0.418255 | 7_2:+60490643 | Msa1066460:CDS |
| AACAACATGTACCTGTTTCC+AGG | 0.425373 | 7_2:+60490024 | Msa1066460:CDS |
| CTGCTTGGATTATCTGGGGT+TGG | 0.425742 | 7_2:+60489417 | Msa1066460:CDS |
| TCACACCCTACCCTGGAAAC+AGG | 0.430910 | 7_2:-60490035 | None:intergenic |
| ATGTGCTGCTTGGATTATCT+GGG | 0.434542 | 7_2:+60489412 | Msa1066460:CDS |
| GGCTTGGGATCACTTCTGTC+TGG | 0.437257 | 7_2:+60490136 | Msa1066460:CDS |
| GAAATGTTACAGCAGAGGTC+GGG | 0.443070 | 7_2:+60490881 | Msa1066460:CDS |
| CAATTATCTTTAGGTTAAGA+AGG | 0.446294 | 7_2:+60489380 | Msa1066460:intron |
| CTTGGATTATCTGGGGTTGG+TGG | 0.453915 | 7_2:+60489420 | Msa1066460:CDS |
| GTCGAATAATGGAGGGGAAG+GGG | 0.458254 | 7_2:+60491376 | Msa1066460:three_prime_UTR |
| CTTCCATTTCAGGATTGGCT+TGG | 0.458619 | 7_2:+60490120 | Msa1066460:intron |
| ATCAGACAACGGTCGACCTT+GGG | 0.462642 | 7_2:-60488466 | None:intergenic |
| AAGATAGTTATAGTTGGAGC+TGG | 0.465083 | 7_2:+60488501 | Msa1066460:CDS |
| AATGGAACATTACCTATCAA+TGG | 0.467799 | 7_2:-60490655 | None:intergenic |
| AGAATCTGTTTCAACAAAAC+CGG | 0.467928 | 7_2:+60489593 | Msa1066460:CDS |
| ATTGATGCATTTAATCATGC+TGG | 0.481140 | 7_2:+60489748 | Msa1066460:CDS |
| AAACAAAAGATAGTTATAGT+TGG | 0.482640 | 7_2:+60488495 | Msa1066460:CDS |
| GAAGGACTGGCTGAAGGACA+CGG | 0.485854 | 7_2:+60490931 | Msa1066460:CDS |
| AATCAGACAACGGTCGACCT+TGG | 0.490764 | 7_2:-60488467 | None:intergenic |
| TGGAAACAGGTACATGTTGT+TGG | 0.491700 | 7_2:-60490022 | None:intergenic |
| TGTACAGGAAATGGAAGAGT+TGG | 0.493416 | 7_2:+60489985 | Msa1066460:intron |
| GACAAGGTTTAGGGAGTTGA+AGG | 0.493690 | 7_2:+60491354 | Msa1066460:three_prime_UTR |
| TGGTGGTGTCTTTAATGAGC+AGG | 0.494871 | 7_2:+60489437 | Msa1066460:CDS |
| ATGTCTAATCCCACTATGAA+TGG | 0.496243 | 7_2:+60489627 | Msa1066460:CDS |
| GTTAAGCCACATGTGCTGCT+TGG | 0.496996 | 7_2:+60489402 | Msa1066460:CDS |
| AAGGACTGGCTGAAGGACAC+GGG | 0.499349 | 7_2:+60490932 | Msa1066460:CDS |
| TGGCTGTCCAAGCAGTTTCA+AGG | 0.499377 | 7_2:+60488704 | Msa1066460:CDS |
| CTTATGGCGATATCGTTTCA+GGG | 0.505866 | 7_2:-60488254 | None:intergenic |
| CAGACATCCTTGAAACTGCT+TGG | 0.507039 | 7_2:-60488711 | None:intergenic |
| ATTGTCCAATAGGGTACAGC+TGG | 0.509799 | 7_2:+60488408 | Msa1066460:intron |
| CAATTTACGGCTGCAACAAA+GGG | 0.511864 | 7_2:-60491422 | None:intergenic |
| TGAACGAGAGGGCAATACTC+AGG | 0.516454 | 7_2:-60491268 | None:intergenic |
| AGGGCTTGGCGTTCTTAACA+TGG | 0.521205 | 7_2:+60488684 | Msa1066460:CDS |
| GGTCGAATAATGGAGGGGAA+GGG | 0.531480 | 7_2:+60491375 | Msa1066460:three_prime_UTR |
| GTTGCACTTGCTGGACTACT+GGG | 0.532740 | 7_2:+60488432 | Msa1066460:CDS |
| TTAGACATGGCAAAGATAGC+CGG | 0.533323 | 7_2:-60489612 | None:intergenic |
| AATAATGGAGGGGAAGGGGA+AGG | 0.534229 | 7_2:+60491380 | Msa1066460:three_prime_UTR |
| TGTTGTTGGCTTGATTTACA+TGG | 0.538797 | 7_2:-60490008 | None:intergenic |
| AGGTCGAATAATGGAGGGGA+AGG | 0.540000 | 7_2:+60491374 | Msa1066460:three_prime_UTR |
| TGCAGCAATTGCTGAAGGAC+TGG | 0.546583 | 7_2:+60490918 | Msa1066460:CDS |
| TGTTGCAGGCAGCATCTGAA+TGG | 0.553171 | 7_2:+60490182 | Msa1066460:CDS |
| TTGAGGATTTCCAAATGAAG+TGG | 0.553205 | 7_2:+60488221 | Msa1066460:CDS |
| AAGCAGTTTCAAGGATGTCT+GGG | 0.557844 | 7_2:+60488713 | Msa1066460:CDS |
| GGTGCTCATCATATAACAGA+TGG | 0.558738 | 7_2:+60490157 | Msa1066460:CDS |
| TACTCTTCACCTTCCAACCT+AGG | 0.563686 | 7_2:-60488058 | None:intergenic |
| CATACCTGCACAATAGCCTT+CGG | 0.567549 | 7_2:-60488127 | None:intergenic |
| ATGGCCGAAGGCTATTGTGC+AGG | 0.569011 | 7_2:+60488123 | Msa1066460:CDS |
| AAATGTTACAGCAGAGGTCG+GGG | 0.572028 | 7_2:+60490882 | Msa1066460:CDS |
| CGAAATGTTACAGCAGAGGT+CGG | 0.573503 | 7_2:+60490880 | Msa1066460:CDS |
| TGAGGATTTCCAAATGAAGT+GGG | 0.574179 | 7_2:+60488222 | Msa1066460:CDS |
| GAACATTACCTATCAATGGA+TGG | 0.575570 | 7_2:-60490651 | None:intergenic |
| GACCTTGAAGGGCTTGCAGA+GGG | 0.582107 | 7_2:+60489174 | Msa1066460:CDS |
| GAAAACATAGTGTTTGCAAG+TGG | 0.582712 | 7_2:+60489772 | Msa1066460:CDS |
| ATTGCTGAAGGACTGGCTGA+AGG | 0.590529 | 7_2:+60490925 | Msa1066460:CDS |
| AAAATTCAAGAGACCTTGAA+GGG | 0.591410 | 7_2:+60489163 | Msa1066460:CDS |
| AGGGTCTTGTCACGACAGAA+AGG | 0.593682 | 7_2:+60489106 | Msa1066460:intron |
| ACAACATGTACCTGTTTCCA+GGG | 0.594527 | 7_2:+60490025 | Msa1066460:CDS |
| AGGACTGGCTGAAGGACACG+GGG | 0.597936 | 7_2:+60490933 | Msa1066460:CDS |
| GACTAAATATGAATAATGCA+AGG | 0.600541 | 7_2:-60491315 | None:intergenic |
| CTACGTGCAGCAATTGCTGA+AGG | 0.603113 | 7_2:+60490913 | Msa1066460:CDS |
| AGTTGAAGGTCGAATAATGG+AGG | 0.603791 | 7_2:+60491368 | Msa1066460:three_prime_UTR |
| TGTTCACGCACGATGGCCGA+AGG | 0.606783 | 7_2:+60488111 | Msa1066460:CDS |
| ACAAACAAACCATTCATAGT+GGG | 0.607045 | 7_2:-60489636 | None:intergenic |
| AGATAGTTATAGTTGGAGCT+GGG | 0.607846 | 7_2:+60488502 | Msa1066460:CDS |
| CCTCTGTCATGTATGAAGCA+AGG | 0.608317 | 7_2:-60490602 | None:intergenic |
| CTTCGACAACCTAGGTTGGA+AGG | 0.608845 | 7_2:+60488049 | Msa1066460:five_prime_UTR |
| TGAAGAGTATCTGTCTATTG+TGG | 0.611373 | 7_2:+60488072 | Msa1066460:five_prime_UTR |
| GGGTGCTAGTATCATTGAAG+TGG | 0.613416 | 7_2:+60489194 | Msa1066460:CDS |
| CTGGGAACTGTAAGATCCCA+AGG | 0.613488 | 7_2:+60488450 | Msa1066460:CDS |
| GATAATCCAAGCAGCACATG+TGG | 0.614028 | 7_2:-60489408 | None:intergenic |
| GAACGAGAGGGCAATACTCA+GGG | 0.618260 | 7_2:-60491267 | None:intergenic |
| AGACCTTGAAGGGCTTGCAG+AGG | 0.626764 | 7_2:+60489173 | Msa1066460:CDS |
| AACAACTGTCTATCAGAGTG+TGG | 0.638015 | 7_2:-60491511 | None:intergenic |
| GTTGAAGGTCGAATAATGGA+GGG | 0.638164 | 7_2:+60491369 | Msa1066460:three_prime_UTR |
| TGTGCTGCTTGGATTATCTG+GGG | 0.638340 | 7_2:+60489413 | Msa1066460:CDS |
| GATACTGTGGAGTACGTCAG+AGG | 0.655567 | 7_2:+60491232 | Msa1066460:CDS |
| ATTCATAGTGGGATTAGACA+TGG | 0.658360 | 7_2:-60489625 | None:intergenic |
| AGTACGTCAGAGGAAATATG+TGG | 0.662162 | 7_2:+60491242 | Msa1066460:CDS |
| TATACGAAATGTTACAGCAG+AGG | 0.671666 | 7_2:+60490876 | Msa1066460:CDS |
| TTGAAGGTCGAATAATGGAG+GGG | 0.676232 | 7_2:+60491370 | Msa1066460:three_prime_UTR |
| TGGAAGCTGTTCACGCACGA+TGG | 0.678332 | 7_2:+60488104 | Msa1066460:CDS |
| ACAGCAATTCATGACTGACA+AGG | 0.691306 | 7_2:+60491338 | Msa1066460:three_prime_UTR |
| TAGTTATAGTTGGAGCTGGG+AGG | 0.704083 | 7_2:+60488505 | Msa1066460:CDS |
| TGTTTCGTAAAATCAGACAA+CGG | 0.709672 | 7_2:-60488477 | None:intergenic |
| TGCATTTCAGGATGATACTG+TGG | 0.719517 | 7_2:+60491219 | Msa1066460:intron |
| CCTTGCTTCATACATGACAG+AGG | 0.720121 | 7_2:+60490602 | Msa1066460:CDS |
| GGACTGGCTGAAGGACACGG+GGG | 0.737828 | 7_2:+60490934 | Msa1066460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTGATATTTTTATTATTAT+TGG | + | chr7_2:60489706-60489725 | Msa1066460:intron | 10.0% |
| !! | ATGTTAGTAATATATTTAAA+AGG | - | chr7_2:60490566-60490585 | None:intergenic | 10.0% |
| !! | ATGATAACAAAAAAAAAAAA+TGG | - | chr7_2:60490676-60490695 | None:intergenic | 10.0% |
| !! | ATTTCTTTATCTTAATTGTT+GGG | + | chr7_2:60489542-60489561 | Msa1066460:intron | 15.0% |
| !! | AATAAGAATATTAACATACA+CGG | + | chr7_2:60490404-60490423 | Msa1066460:intron | 15.0% |
| !!! | GATTTTCATTTTTTTTTTCT+TGG | + | chr7_2:60490698-60490717 | Msa1066460:intron | 15.0% |
| !!! | CAAGTTTTTAAAAGAAATAA+TGG | + | chr7_2:60490798-60490817 | Msa1066460:intron | 15.0% |
| !!! | ATATAATTTGTATTCTATCA+GGG | + | chr7_2:60491051-60491070 | Msa1066460:intron | 15.0% |
| !! | CATATATAAGATAAAATAAG+AGG | - | chr7_2:60491128-60491147 | None:intergenic | 15.0% |
| !!! | CTCTTATTTTATCTTATATA+TGG | + | chr7_2:60491126-60491145 | Msa1066460:intron | 15.0% |
| !! | ATATTTCAATTTCAATCTAA+TGG | + | chr7_2:60491563-60491582 | Msa1066460:three_prime_UTR | 15.0% |
| !! | AAACAAAAGATAGTTATAGT+TGG | + | chr7_2:60488495-60488514 | Msa1066460:CDS | 20.0% |
| !! | TAGAATCATGAAGATTATTA+TGG | - | chr7_2:60488851-60488870 | None:intergenic | 20.0% |
| !! | GATAAAAAATTGAGGATATT+TGG | - | chr7_2:60488915-60488934 | None:intergenic | 20.0% |
| !!! | ATTTTGACGATAAAAAATTG+AGG | - | chr7_2:60488923-60488942 | None:intergenic | 20.0% |
| !!! | GTTTTCATTTATAGTTTTGA+CGG | + | chr7_2:60488955-60488974 | Msa1066460:intron | 20.0% |
| !!! | CATGATAATTATATGCATTT+TGG | + | chr7_2:60488978-60488997 | Msa1066460:intron | 20.0% |
| !! | TATACAAACATGATTATCTA+TGG | - | chr7_2:60489303-60489322 | None:intergenic | 20.0% |
| !!! | TTTTTATGCCAATTATCTTT+AGG | + | chr7_2:60489371-60489390 | Msa1066460:intron | 20.0% |
| !! | TTAAATGCAATAGACATATT+TGG | + | chr7_2:60489519-60489538 | Msa1066460:intron | 20.0% |
| !! | GATTTCTTTATCTTAATTGT+TGG | + | chr7_2:60489541-60489560 | Msa1066460:intron | 20.0% |
| !!! | ACCTCTTAATATTATTTTCT+TGG | + | chr7_2:60489827-60489846 | Msa1066460:intron | 20.0% |
| !!! | TTAATATTATTTTCTTGGCT+TGG | + | chr7_2:60489832-60489851 | Msa1066460:intron | 20.0% |
| !! | TTTCATATATTTCTCAGATA+TGG | + | chr7_2:60489869-60489888 | Msa1066460:intron | 20.0% |
| !!! | AAAAATTATTTTGGAGGTAA+TGG | - | chr7_2:60489966-60489985 | None:intergenic | 20.0% |
| !!! | TTCCTGTACAAAAATTATTT+TGG | - | chr7_2:60489975-60489994 | None:intergenic | 20.0% |
| !!! | AATAATTTTTGTACAGGAAA+TGG | + | chr7_2:60489976-60489995 | Msa1066460:intron | 20.0% |
| !!! | TTTAGTTTTTAGATCAATTG+TGG | + | chr7_2:60490504-60490523 | Msa1066460:intron | 20.0% |
| !! | AAGAAATAATGGTATGTATA+TGG | + | chr7_2:60490809-60490828 | Msa1066460:intron | 20.0% |
| !!! | GATATAATTTGTATTCTATC+AGG | + | chr7_2:60491050-60491069 | Msa1066460:intron | 20.0% |
| !! | ATAAGATAAAATAAGAGGTT+TGG | - | chr7_2:60491123-60491142 | None:intergenic | 20.0% |
| !!! | TGACTTATTTTTTCAGTTTG+AGG | + | chr7_2:60488204-60488223 | Msa1066460:intron | 25.0% |
| ! | CATTAAACATGCAAAACTTA+TGG | - | chr7_2:60488273-60488292 | None:intergenic | 25.0% |
| ! | CATGTTTAATGATGATATAC+AGG | + | chr7_2:60488282-60488301 | Msa1066460:CDS | 25.0% |
| ! | ATGTTCAATCATTTAAGTGA+TGG | + | chr7_2:60488336-60488355 | Msa1066460:intron | 25.0% |
| !! | ATCATTTTCATTGTCCAATA+GGG | + | chr7_2:60488399-60488418 | Msa1066460:intron | 25.0% |
| ! | AAAAAAATATCATGTAAGGC+AGG | - | chr7_2:60488648-60488667 | None:intergenic | 25.0% |
| ! | CATGAAGATTATTATGGATT+AGG | - | chr7_2:60488845-60488864 | None:intergenic | 25.0% |
| ! | ATGATGAATCTTATCAACAA+TGG | - | chr7_2:60489051-60489070 | None:intergenic | 25.0% |
| !!! | TCTCTTGAATTTTTAGCAAA+TGG | - | chr7_2:60489156-60489175 | None:intergenic | 25.0% |
| !! | AGTTTTCCTTAAACAAATTC+AGG | - | chr7_2:60489227-60489246 | None:intergenic | 25.0% |
| ! | CTTCTTAACCTAAAGATAAT+TGG | - | chr7_2:60489382-60489401 | None:intergenic | 25.0% |
| !! | CAATTATCTTTAGGTTAAGA+AGG | + | chr7_2:60489380-60489399 | Msa1066460:intron | 25.0% |
| !! | CAAGATCTACATTTTCAAAA+GGG | - | chr7_2:60489801-60489820 | None:intergenic | 25.0% |
| ! | GCCAAGAAAATAATATTAAG+AGG | - | chr7_2:60489831-60489850 | None:intergenic | 25.0% |
| ! | TATATAGGATATACATCTTG+TGG | + | chr7_2:60489896-60489915 | Msa1066460:intron | 25.0% |
| !!! | CTGTACAAAAATTATTTTGG+AGG | - | chr7_2:60489972-60489991 | None:intergenic | 25.0% |
| !! | CTCCAAAATAATTTTTGTAC+AGG | + | chr7_2:60489970-60489989 | Msa1066460:intron | 25.0% |
| !! | TAAATTTTCTAAACTTCCAC+TGG | - | chr7_2:60490220-60490239 | None:intergenic | 25.0% |
| !! | TTATCTTGTTTGATGTTTGT+AGG | + | chr7_2:60490237-60490256 | Msa1066460:intron | 25.0% |
| !! | TATCTTGTTTGATGTTTGTA+GGG | + | chr7_2:60490238-60490257 | Msa1066460:intron | 25.0% |
| !! | GTAGAGAAATTTTCAAAGAA+AGG | - | chr7_2:60490341-60490360 | None:intergenic | 25.0% |
| !!! | TATATTTAAAAGGCATTGAG+TGG | - | chr7_2:60490556-60490575 | None:intergenic | 25.0% |
| ! | GAAAAATGAAATTTCTGTGA+AGG | + | chr7_2:60491292-60491311 | Msa1066460:exon | 25.0% |
| ! | GACTAAATATGAATAATGCA+AGG | - | chr7_2:60491318-60491337 | None:intergenic | 25.0% |
| ! | CTGATTACACAAACAATTTA+CGG | - | chr7_2:60491438-60491457 | None:intergenic | 25.0% |
| TTGATGTTTACATTAGCAAC+TGG | + | chr7_2:60488174-60488193 | Msa1066460:intron | 30.0% | |
| CTATTGGACAATGAAAATGA+TGG | - | chr7_2:60488400-60488419 | None:intergenic | 30.0% | |
| ! | CATCATTTTCATTGTCCAAT+AGG | + | chr7_2:60488398-60488417 | Msa1066460:intron | 30.0% |
| TGTTTCGTAAAATCAGACAA+CGG | - | chr7_2:60488480-60488499 | None:intergenic | 30.0% | |
| GAAACAAACTAGACACAATA+AGG | - | chr7_2:60488558-60488577 | None:intergenic | 30.0% | |
| GGGCAAAAAAATATCATGTA+AGG | - | chr7_2:60488652-60488671 | None:intergenic | 30.0% | |
| TGATGTTACCTCATGATTAT+TGG | + | chr7_2:60488873-60488892 | Msa1066460:intron | 30.0% | |
| AAAATGAGCCAATAATCATG+AGG | - | chr7_2:60488884-60488903 | None:intergenic | 30.0% | |
| AAAAATTCAAGAGACCTTGA+AGG | + | chr7_2:60489162-60489181 | Msa1066460:CDS | 30.0% | |
| AAAATTCAAGAGACCTTGAA+GGG | + | chr7_2:60489163-60489182 | Msa1066460:CDS | 30.0% | |
| ! | AATGCTCCTGAATTTGTTTA+AGG | + | chr7_2:60489218-60489237 | Msa1066460:intron | 30.0% |
| TTGTTTAAGGAAAACTCCAT+TGG | + | chr7_2:60489231-60489250 | Msa1066460:intron | 30.0% | |
| AAATAACAGACTTAAGCCAA+TGG | - | chr7_2:60489250-60489269 | None:intergenic | 30.0% | |
| AGAATCTGTTTCAACAAAAC+CGG | + | chr7_2:60489593-60489612 | Msa1066460:CDS | 30.0% | |
| ACAAACAAACCATTCATAGT+GGG | - | chr7_2:60489639-60489658 | None:intergenic | 30.0% | |
| TACAAACAAACCATTCATAG+TGG | - | chr7_2:60489640-60489659 | None:intergenic | 30.0% | |
| !! | ATGAATGGTTTGTTTGTACA+AGG | + | chr7_2:60489642-60489661 | Msa1066460:intron | 30.0% |
| ATTGATGCATTTAATCATGC+TGG | + | chr7_2:60489748-60489767 | Msa1066460:CDS | 30.0% | |
| ! | CCAAGATCTACATTTTCAAA+AGG | - | chr7_2:60489802-60489821 | None:intergenic | 30.0% |
| !! | CCTTTTGAAAATGTAGATCT+TGG | + | chr7_2:60489799-60489818 | Msa1066460:CDS | 30.0% |
| CATATATTTCTCAGATATGG+AGG | + | chr7_2:60489872-60489891 | Msa1066460:intron | 30.0% | |
| ATGCCTTTGAATGAAAATGT+TGG | + | chr7_2:60490079-60490098 | Msa1066460:intron | 30.0% | |
| TGCCTTTGAATGAAAATGTT+GGG | + | chr7_2:60490080-60490099 | Msa1066460:intron | 30.0% | |
| TGATTAGACAATAAGTGAGA+AGG | - | chr7_2:60490298-60490317 | None:intergenic | 30.0% | |
| ! | AATTTTCAAAGAAAGGAGGT+AGG | - | chr7_2:60490334-60490353 | None:intergenic | 30.0% |
| ! | GAGAAATTTTCAAAGAAAGG+AGG | - | chr7_2:60490338-60490357 | None:intergenic | 30.0% |
| ! | ATGGATACAAGATTCCTTTT+TGG | - | chr7_2:60490635-60490654 | None:intergenic | 30.0% |
| AATGGAACATTACCTATCAA+TGG | - | chr7_2:60490658-60490677 | None:intergenic | 30.0% | |
| GGTATGTATATGGTTATTTG+TGG | + | chr7_2:60490819-60490838 | Msa1066460:intron | 30.0% | |
| ! | TGACATATGTTCAAGTTCTT+TGG | - | chr7_2:60490968-60490987 | None:intergenic | 30.0% |
| TAATCATGCATTGCATATTC+TGG | + | chr7_2:60491016-60491035 | Msa1066460:intron | 30.0% | |
| !! | TAACTCATTGTTGTTTGCTT+TGG | + | chr7_2:60491195-60491214 | Msa1066460:intron | 30.0% |
| !! | TTCATTTTTCATGAACGAGA+GGG | - | chr7_2:60491282-60491301 | None:intergenic | 30.0% |
| !! | TTTCATTTTTCATGAACGAG+AGG | - | chr7_2:60491283-60491302 | None:intergenic | 30.0% |
| !! | TGAAGAGTATCTGTCTATTG+TGG | + | chr7_2:60488072-60488091 | Msa1066460:five_prime_UTR | 35.0% |
| GTCTATTGTGGATGAATTCA+TGG | + | chr7_2:60488084-60488103 | Msa1066460:exon | 35.0% | |
| TTGAGGATTTCCAAATGAAG+TGG | + | chr7_2:60488221-60488240 | Msa1066460:CDS | 35.0% | |
| TGAGGATTTCCAAATGAAGT+GGG | + | chr7_2:60488222-60488241 | Msa1066460:CDS | 35.0% | |
| TTTCAAAAGCCCACTTCATT+TGG | - | chr7_2:60488234-60488253 | None:intergenic | 35.0% | |
| CAGTAGTTACTTCAAGAACA+CGG | - | chr7_2:60488364-60488383 | None:intergenic | 35.0% | |
| AAGATAGTTATAGTTGGAGC+TGG | + | chr7_2:60488501-60488520 | Msa1066460:CDS | 35.0% | |
| AGATAGTTATAGTTGGAGCT+GGG | + | chr7_2:60488502-60488521 | Msa1066460:CDS | 35.0% | |
| !! | GCATTTTGGCATATCTGTTT+TGG | + | chr7_2:60488992-60489011 | Msa1066460:intron | 35.0% |
| CTTATCAACAATGGCTGAAT+CGG | - | chr7_2:60489042-60489061 | None:intergenic | 35.0% | |
| ATGATGTGATACCTAAATGC+AGG | + | chr7_2:60489086-60489105 | Msa1066460:intron | 35.0% | |
| TGATGTGATACCTAAATGCA+GGG | + | chr7_2:60489087-60489106 | Msa1066460:intron | 35.0% | |
| AGACACTGTCAGAGTATAAA+AGG | - | chr7_2:60489469-60489488 | None:intergenic | 35.0% | |
| TAATTGTTGGGATTCAACTC+AGG | + | chr7_2:60489554-60489573 | Msa1066460:intron | 35.0% | |
| ! | ATTCATAGTGGGATTAGACA+TGG | - | chr7_2:60489628-60489647 | None:intergenic | 35.0% |
| ATGTCTAATCCCACTATGAA+TGG | + | chr7_2:60489627-60489646 | Msa1066460:CDS | 35.0% | |
| GAAAACATAGTGTTTGCAAG+TGG | + | chr7_2:60489772-60489791 | Msa1066460:CDS | 35.0% | |
| ACATCTTGTGGTACAAAGTT+TGG | + | chr7_2:60489908-60489927 | Msa1066460:intron | 35.0% | |
| !! | TGTTGTTGGCTTGATTTACA+TGG | - | chr7_2:60490011-60490030 | None:intergenic | 35.0% |
| GCCTTTGAATGAAAATGTTG+GGG | + | chr7_2:60490081-60490100 | Msa1066460:intron | 35.0% | |
| ! | ACCCCAACATTTTCATTCAA+AGG | - | chr7_2:60490085-60490104 | None:intergenic | 35.0% |
| CTATTGTAACCTTCCATTTC+AGG | + | chr7_2:60490110-60490129 | Msa1066460:intron | 35.0% | |
| TATAACAGATGGAATGTTGC+AGG | + | chr7_2:60490168-60490187 | Msa1066460:CDS | 35.0% | |
| AGCATCTGAATGGTATAGTT+TGG | + | chr7_2:60490192-60490211 | Msa1066460:intron | 35.0% | |
| ACAGAGGAAGATATCCAAAA+AGG | + | chr7_2:60490618-60490637 | Msa1066460:CDS | 35.0% | |
| TCTTGTATCCATCCATTGAT+AGG | + | chr7_2:60490643-60490662 | Msa1066460:CDS | 35.0% | |
| GAACATTACCTATCAATGGA+TGG | - | chr7_2:60490654-60490673 | None:intergenic | 35.0% | |
| TATACGAAATGTTACAGCAG+AGG | + | chr7_2:60490876-60490895 | Msa1066460:CDS | 35.0% | |
| !! | GGACTGTTTCTAATCATGTT+TGG | - | chr7_2:60491087-60491106 | None:intergenic | 35.0% |
| !! | AGGTTTGGTCAATTTTGCAA+TGG | - | chr7_2:60491108-60491127 | None:intergenic | 35.0% |
| TTCTTATGTCAATACTACCC+TGG | + | chr7_2:60491149-60491168 | Msa1066460:intron | 35.0% | |
| GCAGAATATGAGTAAAACCA+GGG | - | chr7_2:60491169-60491188 | None:intergenic | 35.0% | |
| AGCAGAATATGAGTAAAACC+AGG | - | chr7_2:60491170-60491189 | None:intergenic | 35.0% | |
| ATTCATGACTGACAAGGTTT+AGG | + | chr7_2:60491344-60491363 | Msa1066460:three_prime_UTR | 35.0% | |
| TTCATGACTGACAAGGTTTA+GGG | + | chr7_2:60491345-60491364 | Msa1066460:three_prime_UTR | 35.0% | |
| CTTATGGCGATATCGTTTCA+GGG | - | chr7_2:60488257-60488276 | None:intergenic | 40.0% | |
| ACTTATGGCGATATCGTTTC+AGG | - | chr7_2:60488258-60488277 | None:intergenic | 40.0% | |
| ! | AGCGATAACAAGAAGCATGA+CGG | - | chr7_2:60488587-60488606 | None:intergenic | 40.0% |
| !!! | AGTTTTTTGGCAGCCTTGTT+AGG | - | chr7_2:60488618-60488637 | None:intergenic | 40.0% |
| AAGCAGTTTCAAGGATGTCT+GGG | + | chr7_2:60488713-60488732 | Msa1066460:CDS | 40.0% | |
| !! | ATGTGCTGCTTGGATTATCT+GGG | + | chr7_2:60489412-60489431 | Msa1066460:CDS | 40.0% |
| GGATTCAACTCAGGTTCTTA+AGG | + | chr7_2:60489563-60489582 | Msa1066460:intron | 40.0% | |
| TTAGACATGGCAAAGATAGC+CGG | - | chr7_2:60489615-60489634 | None:intergenic | 40.0% | |
| CTCAGATATGGAGGCTATAT+AGG | + | chr7_2:60489881-60489900 | Msa1066460:intron | 40.0% | |
| TGTACAGGAAATGGAAGAGT+TGG | + | chr7_2:60489985-60490004 | Msa1066460:intron | 40.0% | |
| TGGAAACAGGTACATGTTGT+TGG | - | chr7_2:60490025-60490044 | None:intergenic | 40.0% | |
| AACAACATGTACCTGTTTCC+AGG | + | chr7_2:60490024-60490043 | Msa1066460:CDS | 40.0% | |
| ACAACATGTACCTGTTTCCA+GGG | + | chr7_2:60490025-60490044 | Msa1066460:CDS | 40.0% | |
| GTAACCTTCCATTTCAGGAT+TGG | + | chr7_2:60490115-60490134 | Msa1066460:intron | 40.0% | |
| !! | TTCCATTTCAGGATTGGCTT+GGG | + | chr7_2:60490121-60490140 | Msa1066460:intron | 40.0% |
| GGTGCTCATCATATAACAGA+TGG | + | chr7_2:60490157-60490176 | Msa1066460:CDS | 40.0% | |
| TGTTTGATGTTTGTAGGGCT+TGG | + | chr7_2:60490243-60490262 | Msa1066460:intron | 40.0% | |
| TCTCTACATGTCTTGATGTG+TGG | + | chr7_2:60490354-60490373 | Msa1066460:intron | 40.0% | |
| TACATGTCTTGATGTGTGGT+GGG | + | chr7_2:60490358-60490377 | Msa1066460:intron | 40.0% | |
| TGAAAGTAGTGTAGAGCTAG+TGG | - | chr7_2:60490440-60490459 | None:intergenic | 40.0% | |
| TCAGAAACGTGCTAAGGAAA+AGG | - | chr7_2:60490728-60490747 | None:intergenic | 40.0% | |
| AGCAATTCAGAAACGTGCTA+AGG | - | chr7_2:60490734-60490753 | None:intergenic | 40.0% | |
| ! | CATTGCATATTCTGGTTGAG+TGG | + | chr7_2:60491024-60491043 | Msa1066460:intron | 40.0% |
| TGCATTTCAGGATGATACTG+TGG | + | chr7_2:60491219-60491238 | Msa1066460:intron | 40.0% | |
| AGTACGTCAGAGGAAATATG+TGG | + | chr7_2:60491242-60491261 | Msa1066460:CDS | 40.0% | |
| ACAGCAATTCATGACTGACA+AGG | + | chr7_2:60491338-60491357 | Msa1066460:three_prime_UTR | 40.0% | |
| AGTTGAAGGTCGAATAATGG+AGG | + | chr7_2:60491368-60491387 | Msa1066460:three_prime_UTR | 40.0% | |
| ! | GTTGAAGGTCGAATAATGGA+GGG | + | chr7_2:60491369-60491388 | Msa1066460:three_prime_UTR | 40.0% |
| ! | TTGAAGGTCGAATAATGGAG+GGG | + | chr7_2:60491370-60491389 | Msa1066460:three_prime_UTR | 40.0% |
| CAATTTACGGCTGCAACAAA+GGG | - | chr7_2:60491425-60491444 | None:intergenic | 40.0% | |
| ACAATTTACGGCTGCAACAA+AGG | - | chr7_2:60491426-60491445 | None:intergenic | 40.0% | |
| AACAACTGTCTATCAGAGTG+TGG | - | chr7_2:60491514-60491533 | None:intergenic | 40.0% | |
| TACTCTTCACCTTCCAACCT+AGG | - | chr7_2:60488061-60488080 | None:intergenic | 45.0% | |
| CATACCTGCACAATAGCCTT+CGG | - | chr7_2:60488130-60488149 | None:intergenic | 45.0% | |
| ATTGTCCAATAGGGTACAGC+TGG | + | chr7_2:60488408-60488427 | Msa1066460:intron | 45.0% | |
| TAGTTATAGTTGGAGCTGGG+AGG | + | chr7_2:60488505-60488524 | Msa1066460:CDS | 45.0% | |
| ! | TCGCTACTTTCTGCCTAACA+AGG | + | chr7_2:60488602-60488621 | Msa1066460:intron | 45.0% |
| CAGACATCCTTGAAACTGCT+TGG | - | chr7_2:60488714-60488733 | None:intergenic | 45.0% | |
| CAAGCAGTTTCAAGGATGTC+TGG | + | chr7_2:60488712-60488731 | Msa1066460:CDS | 45.0% | |
| CAACAATGGCTGAATCGGAT+AGG | - | chr7_2:60489037-60489056 | None:intergenic | 45.0% | |
| TTAGCAAATGGAACTGCAGC+TGG | - | chr7_2:60489144-60489163 | None:intergenic | 45.0% | |
| GGGTGCTAGTATCATTGAAG+TGG | + | chr7_2:60489194-60489213 | Msa1066460:CDS | 45.0% | |
| GATAATCCAAGCAGCACATG+TGG | - | chr7_2:60489411-60489430 | None:intergenic | 45.0% | |
| !! | CATGTGCTGCTTGGATTATC+TGG | + | chr7_2:60489411-60489430 | Msa1066460:CDS | 45.0% |
| !! | TGTGCTGCTTGGATTATCTG+GGG | + | chr7_2:60489413-60489432 | Msa1066460:CDS | 45.0% |
| ! | TGGTGGTGTCTTTAATGAGC+AGG | + | chr7_2:60489437-60489456 | Msa1066460:CDS | 45.0% |
| ATGTACCTGTTTCCAGGGTA+GGG | + | chr7_2:60490030-60490049 | Msa1066460:intron | 45.0% | |
| CAAGCCAATCCTGAAATGGA+AGG | - | chr7_2:60490122-60490141 | None:intergenic | 45.0% | |
| !! | CTTCCATTTCAGGATTGGCT+TGG | + | chr7_2:60490120-60490139 | Msa1066460:intron | 45.0% |
| ATCCCAAGCCAATCCTGAAA+TGG | - | chr7_2:60490126-60490145 | None:intergenic | 45.0% | |
| CTACATGTCTTGATGTGTGG+TGG | + | chr7_2:60490357-60490376 | Msa1066460:intron | 45.0% | |
| ACATGTCTTGATGTGTGGTG+GGG | + | chr7_2:60490359-60490378 | Msa1066460:intron | 45.0% | |
| TAGTGTAGAGCTAGTGGCAA+GGG | - | chr7_2:60490434-60490453 | None:intergenic | 45.0% | |
| ATGTATGAAGCAAGGCTGTC+AGG | - | chr7_2:60490597-60490616 | None:intergenic | 45.0% | |
| CCTCTGTCATGTATGAAGCA+AGG | - | chr7_2:60490605-60490624 | None:intergenic | 45.0% | |
| CCTTGCTTCATACATGACAG+AGG | + | chr7_2:60490602-60490621 | Msa1066460:CDS | 45.0% | |
| CGAAATGTTACAGCAGAGGT+CGG | + | chr7_2:60490880-60490899 | Msa1066460:CDS | 45.0% | |
| GAAATGTTACAGCAGAGGTC+GGG | + | chr7_2:60490881-60490900 | Msa1066460:CDS | 45.0% | |
| AAATGTTACAGCAGAGGTCG+GGG | + | chr7_2:60490882-60490901 | Msa1066460:CDS | 45.0% | |
| GTTTGCTTTGGCTGCATTTC+AGG | + | chr7_2:60491207-60491226 | Msa1066460:intron | 45.0% | |
| GACAAGGTTTAGGGAGTTGA+AGG | + | chr7_2:60491354-60491373 | Msa1066460:three_prime_UTR | 45.0% | |
| GGGAGTTGAAGGTCGAATAA+TGG | + | chr7_2:60491365-60491384 | Msa1066460:three_prime_UTR | 45.0% | |
| !!! | TTTTGATTTAATATATTTAT+TGG | + | chr7_2:60491466-60491485 | Msa1066460:three_prime_UTR | 5.0% |
| AGGACTTCGACAACCTAGGT+TGG | + | chr7_2:60488045-60488064 | Msa1066460:five_prime_UTR | 50.0% | |
| ! | CTTCGACAACCTAGGTTGGA+AGG | + | chr7_2:60488049-60488068 | Msa1066460:five_prime_UTR | 50.0% |
| ! | GTTGCACTTGCTGGACTACT+GGG | + | chr7_2:60488432-60488451 | Msa1066460:CDS | 50.0% |
| CTGGGAACTGTAAGATCCCA+AGG | + | chr7_2:60488450-60488469 | Msa1066460:CDS | 50.0% | |
| ATCAGACAACGGTCGACCTT+GGG | - | chr7_2:60488469-60488488 | None:intergenic | 50.0% | |
| AATCAGACAACGGTCGACCT+TGG | - | chr7_2:60488470-60488489 | None:intergenic | 50.0% | |
| AGGGCTTGGCGTTCTTAACA+TGG | + | chr7_2:60488684-60488703 | Msa1066460:CDS | 50.0% | |
| TGGCTGTCCAAGCAGTTTCA+AGG | + | chr7_2:60488704-60488723 | Msa1066460:CDS | 50.0% | |
| CGTGACAAGACCCTGCATTT+AGG | - | chr7_2:60489100-60489119 | None:intergenic | 50.0% | |
| ! | AGGGTCTTGTCACGACAGAA+AGG | + | chr7_2:60489106-60489125 | Msa1066460:intron | 50.0% |
| ! | GTTAAGCCACATGTGCTGCT+TGG | + | chr7_2:60489402-60489421 | Msa1066460:CDS | 50.0% |
| ! | CTGCTTGGATTATCTGGGGT+TGG | + | chr7_2:60489417-60489436 | Msa1066460:CDS | 50.0% |
| ! | CTTGGATTATCTGGGGTTGG+TGG | + | chr7_2:60489420-60489439 | Msa1066460:CDS | 50.0% |
| CATGTACCTGTTTCCAGGGT+AGG | + | chr7_2:60490029-60490048 | Msa1066460:intron | 50.0% | |
| TATAAGCTCACACCCTACCC+TGG | - | chr7_2:60490045-60490064 | None:intergenic | 50.0% | |
| TGTTGCAGGCAGCATCTGAA+TGG | + | chr7_2:60490182-60490201 | Msa1066460:CDS | 50.0% | |
| ATGGTATAGTTTGGCGCCAG+TGG | + | chr7_2:60490201-60490220 | Msa1066460:intron | 50.0% | |
| GTAGTGTAGAGCTAGTGGCA+AGG | - | chr7_2:60490435-60490454 | None:intergenic | 50.0% | |
| TGAGTGGCATCGCATCAGAA+GGG | - | chr7_2:60490540-60490559 | None:intergenic | 50.0% | |
| TTGAGTGGCATCGCATCAGA+AGG | - | chr7_2:60490541-60490560 | None:intergenic | 50.0% | |
| CTACGTGCAGCAATTGCTGA+AGG | + | chr7_2:60490913-60490932 | Msa1066460:CDS | 50.0% | |
| TGCAGCAATTGCTGAAGGAC+TGG | + | chr7_2:60490918-60490937 | Msa1066460:CDS | 50.0% | |
| !! | ATTGCTGAAGGACTGGCTGA+AGG | + | chr7_2:60490925-60490944 | Msa1066460:CDS | 50.0% |
| GATACTGTGGAGTACGTCAG+AGG | + | chr7_2:60491232-60491251 | Msa1066460:CDS | 50.0% | |
| GAACGAGAGGGCAATACTCA+GGG | - | chr7_2:60491270-60491289 | None:intergenic | 50.0% | |
| TGAACGAGAGGGCAATACTC+AGG | - | chr7_2:60491271-60491290 | None:intergenic | 50.0% | |
| ! | AGGTCGAATAATGGAGGGGA+AGG | + | chr7_2:60491374-60491393 | Msa1066460:three_prime_UTR | 50.0% |
| ! | GGTCGAATAATGGAGGGGAA+GGG | + | chr7_2:60491375-60491394 | Msa1066460:three_prime_UTR | 50.0% |
| ! | GTCGAATAATGGAGGGGAAG+GGG | + | chr7_2:60491376-60491395 | Msa1066460:three_prime_UTR | 50.0% |
| ! | AATAATGGAGGGGAAGGGGA+AGG | + | chr7_2:60491380-60491399 | Msa1066460:three_prime_UTR | 50.0% |
| TGGAAGCTGTTCACGCACGA+TGG | + | chr7_2:60488104-60488123 | Msa1066460:CDS | 55.0% | |
| ATGGCCGAAGGCTATTGTGC+AGG | + | chr7_2:60488123-60488142 | Msa1066460:CDS | 55.0% | |
| CAACGCCAGCTGTACCCTAT+TGG | - | chr7_2:60488416-60488435 | None:intergenic | 55.0% | |
| ! | CGTTGCACTTGCTGGACTAC+TGG | + | chr7_2:60488431-60488450 | Msa1066460:CDS | 55.0% |
| !!! | GGCAGGAGCGAGCAGTTTTT+TGG | - | chr7_2:60488631-60488650 | None:intergenic | 55.0% |
| !! | TTTTGCCCGACTTGCAGTGC+AGG | + | chr7_2:60488664-60488683 | Msa1066460:intron | 55.0% |
| ! | TTTGCCCGACTTGCAGTGCA+GGG | + | chr7_2:60488665-60488684 | Msa1066460:intron | 55.0% |
| AGACCTTGAAGGGCTTGCAG+AGG | + | chr7_2:60489173-60489192 | Msa1066460:CDS | 55.0% | |
| GACCTTGAAGGGCTTGCAGA+GGG | + | chr7_2:60489174-60489193 | Msa1066460:CDS | 55.0% | |
| TCACACCCTACCCTGGAAAC+AGG | - | chr7_2:60490038-60490057 | None:intergenic | 55.0% | |
| GGCTTGGGATCACTTCTGTC+TGG | + | chr7_2:60490136-60490155 | Msa1066460:CDS | 55.0% | |
| !! | GAAGGACTGGCTGAAGGACA+CGG | + | chr7_2:60490931-60490950 | Msa1066460:CDS | 55.0% |
| !! | AAGGACTGGCTGAAGGACAC+GGG | + | chr7_2:60490932-60490951 | Msa1066460:CDS | 55.0% |
| TGTTCACGCACGATGGCCGA+AGG | + | chr7_2:60488111-60488130 | Msa1066460:CDS | 60.0% | |
| ACAGCTGGCGTTGCACTTGC+TGG | + | chr7_2:60488423-60488442 | Msa1066460:CDS | 60.0% | |
| CAAGCCCTGCACTGCAAGTC+GGG | - | chr7_2:60488672-60488691 | None:intergenic | 60.0% | |
| CCAAGCCCTGCACTGCAAGT+CGG | - | chr7_2:60488673-60488692 | None:intergenic | 60.0% | |
| CACCCTCTGCAAGCCCTTCA+AGG | - | chr7_2:60489179-60489198 | None:intergenic | 60.0% | |
| !! | AGGACTGGCTGAAGGACACG+GGG | + | chr7_2:60490933-60490952 | Msa1066460:CDS | 60.0% |
| !! | CTGAAGGACACGGGGGTGTT+GGG | + | chr7_2:60490941-60490960 | Msa1066460:CDS | 60.0% |
| ! | CCGACTTGCAGTGCAGGGCT+TGG | + | chr7_2:60488670-60488689 | Msa1066460:intron | 65.0% |
| !! | GGACTGGCTGAAGGACACGG+GGG | + | chr7_2:60490934-60490953 | Msa1066460:CDS | 65.0% |
| ! | GCTGAAGGACACGGGGGTGT+TGG | + | chr7_2:60490940-60490959 | Msa1066460:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 60488042 | 60491597 | 60488042 | ID=Msa1066460;Name=Msa1066460 |
| chr7_2 | mRNA | 60488042 | 60491597 | 60488042 | ID=Msa1066460-mRNA-1;Parent=Msa1066460;Name=Msa1066460-mRNA-1;_AED=0.20;_eAED=0.20;_QI=61|1|1|1|1|1|13|297|348 |
| chr7_2 | exon | 60488042 | 60488144 | 60488042 | ID=Msa1066460-mRNA-1:exon:11901;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60488220 | 60488303 | 60488220 | ID=Msa1066460-mRNA-1:exon:11902;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60488420 | 60488526 | 60488420 | ID=Msa1066460-mRNA-1:exon:11903;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60488681 | 60488783 | 60488681 | ID=Msa1066460-mRNA-1:exon:11904;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60489108 | 60489215 | 60489108 | ID=Msa1066460-mRNA-1:exon:11905;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60489393 | 60489458 | 60489393 | ID=Msa1066460-mRNA-1:exon:11906;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60489576 | 60489648 | 60489576 | ID=Msa1066460-mRNA-1:exon:11907;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60489734 | 60489820 | 60489734 | ID=Msa1066460-mRNA-1:exon:11908;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60489992 | 60490046 | 60489992 | ID=Msa1066460-mRNA-1:exon:11909;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60490132 | 60490203 | 60490132 | ID=Msa1066460-mRNA-1:exon:11910;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60490602 | 60490664 | 60490602 | ID=Msa1066460-mRNA-1:exon:11911;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60490876 | 60490990 | 60490876 | ID=Msa1066460-mRNA-1:exon:11912;Parent=Msa1066460-mRNA-1 |
| chr7_2 | exon | 60491229 | 60491597 | 60491229 | ID=Msa1066460-mRNA-1:exon:11913;Parent=Msa1066460-mRNA-1 |
| chr7_2 | five_prime_UTR | 60488042 | 60488102 | 60488042 | ID=Msa1066460-mRNA-1:five_prime_utr;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60488103 | 60488144 | 60488103 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60488220 | 60488303 | 60488220 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60488420 | 60488526 | 60488420 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60488681 | 60488783 | 60488681 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60489108 | 60489215 | 60489108 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60489393 | 60489458 | 60489393 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60489576 | 60489648 | 60489576 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60489734 | 60489820 | 60489734 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60489992 | 60490046 | 60489992 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60490132 | 60490203 | 60490132 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60490602 | 60490664 | 60490602 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60490876 | 60490990 | 60490876 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | CDS | 60491229 | 60491300 | 60491229 | ID=Msa1066460-mRNA-1:cds;Parent=Msa1066460-mRNA-1 |
| chr7_2 | three_prime_UTR | 60491301 | 60491597 | 60491301 | ID=Msa1066460-mRNA-1:three_prime_utr;Parent=Msa1066460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
