AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1255740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255740 MtrunA17_Chr8g0374321 96.429 700 16 1 1 691 1 700 0.0 1397
Msa1255740 MtrunA17_Chr5g0397621 71.955 895 241 7 97 989 13 899 0.0 1323
Msa1255740 MtrunA17_Chr8g0339181 54.460 953 408 7 44 981 16 957 0.0 996
Msa1255740 MtrunA17_Chr8g0339181 25.862 174 123 3 110 282 15 183 2.33e-11 68.2
Msa1255740 MtrunA17_Chr2g0297051 47.660 940 459 9 59 975 84 1013 0.0 827
Msa1255740 MtrunA17_Chr4g0052521 47.176 956 463 13 59 983 45 989 0.0 823
Msa1255740 MtrunA17_Chr8g0374331 98.790 248 3 0 742 989 1 248 2.36e-167 489
Msa1255740 MtrunA17_Chr8g0374391 98.755 241 3 0 749 989 1 241 5.11e-162 475
Msa1255740 MtrunA17_Chr4g0050431 39.070 645 351 10 344 970 287 907 2.26e-125 404
Msa1255740 MtrunA17_Chr8g0374371 97.861 187 4 0 428 614 1 187 1.32e-124 378
Msa1255740 MtrunA17_Chr3g0136331 35.445 663 381 13 344 976 241 886 2.66e-108 357
Msa1255740 MtrunA17_Chr4g0071991 32.027 587 341 17 393 969 159 697 3.15e-69 250
Msa1255740 MtrunA17_Chr2g0297871 28.793 580 340 16 414 974 22 547 1.05e-67 240
Msa1255740 MtrunA17_Chr4g0053441 27.083 624 394 18 360 950 174 769 3.02e-44 173
Msa1255740 MtrunA17_Chr4g0072131 23.924 581 355 12 452 967 147 705 8.58e-25 111
Msa1255740 MtrunA17_Chr8g0365021 24.682 551 318 10 452 939 214 730 9.26e-25 111
Msa1255740 MtrunA17_Chr1g0147981 23.757 543 333 10 452 939 161 677 1.16e-24 111
Msa1255740 MtrunA17_Chr8g0335291 24.552 558 337 15 452 950 152 684 1.80e-24 110
Msa1255740 MtrunA17_Chr2g0298031 24.453 548 324 11 452 939 149 666 2.12e-24 110
Msa1255740 MtrunA17_Chr6g0452721 24.051 553 347 14 452 950 146 679 2.44e-23 107
Msa1255740 MtrunA17_Chr1g0148031 23.389 543 335 10 452 939 144 660 2.81e-23 106
Msa1255740 MtrunA17_Chr3g0138931 24.132 547 326 12 452 939 144 660 5.43e-23 105
Msa1255740 MtrunA17_Chr4g0059961 23.268 563 339 12 452 950 148 681 2.43e-22 103
Msa1255740 MtrunA17_Chr2g0333721 23.766 547 327 13 452 931 142 665 4.82e-22 102
Msa1255740 MtrunA17_Chr2g0304941 23.260 546 317 14 452 928 145 657 1.33e-21 101
Msa1255740 MtrunA17_Chr5g0401211 33.898 177 88 3 784 931 649 825 4.98e-21 99.8
Msa1255740 MtrunA17_Chr3g0134771 33.523 176 89 3 784 931 652 827 2.76e-20 97.1
Msa1255740 MtrunA17_Chr4g0054021 32.768 177 90 3 784 931 572 748 9.85e-20 95.5
Msa1255740 MtrunA17_Chr7g0276551 25.721 416 230 13 600 950 41 442 2.11e-19 94.0
Msa1255740 MtrunA17_Chr4g0020551 32.768 177 91 3 783 931 584 760 2.70e-18 90.5
Msa1255740 MtrunA17_Chr5g0397631 56.627 83 27 3 14 94 12 87 7.31e-18 87.4
Msa1255740 MtrunA17_Chr8g0382071 31.667 180 94 3 783 933 648 827 2.95e-17 87.4
Msa1255740 MtrunA17_Chr4g0002331 27.830 212 115 4 757 933 684 892 4.78e-17 86.7
Msa1255740 MtrunA17_Chr2g0298871 27.717 184 100 2 783 933 696 879 5.64e-17 86.7
Msa1255740 MtrunA17_Chr8g0340261 29.508 183 97 3 783 933 193 375 5.79e-17 85.5
Msa1255740 MtrunA17_Chr1g0173111 31.461 178 93 3 783 931 645 822 9.95e-17 85.5
Msa1255740 MtrunA17_Chr7g0263361 27.004 237 117 4 729 928 586 803 1.33e-16 85.1
Msa1255740 MtrunA17_Chr6g0456201 29.032 186 100 3 780 933 638 823 1.37e-16 85.1
Msa1255740 MtrunA17_Chr4g0065481 30.319 188 94 2 782 939 481 661 2.17e-16 84.3
Msa1255740 MtrunA17_Chr7g0260401 27.568 185 100 2 783 933 672 856 4.22e-16 83.6
Msa1255740 MtrunA17_Chr8g0381711 28.877 187 106 3 754 913 486 672 8.05e-15 79.3
Msa1255740 MtrunA17_Chr3g0134951 26.904 197 110 2 780 942 580 776 1.60e-14 78.6
Msa1255740 MtrunA17_Chr8g0346461 28.994 169 86 2 783 917 619 787 2.17e-14 78.2
Msa1255740 MtrunA17_Chr8g0355421 30.488 164 85 3 783 917 639 802 1.40e-13 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255740 AT1G63440.1 71.067 947 254 7 56 989 54 993 0.0 1377
Msa1255740 AT5G44790.1 47.254 965 475 9 43 983 44 998 0.0 849
Msa1255740 AT5G21930.2 35.407 675 376 16 344 981 232 883 9.03e-115 374
Msa1255740 AT5G21930.1 35.407 675 376 16 344 981 232 883 9.03e-115 374
Msa1255740 AT4G33520.2 38.245 638 362 12 344 970 300 916 2.69e-112 369
Msa1255740 AT4G33520.3 38.245 638 362 12 344 970 300 916 3.34e-112 369
Msa1255740 AT5G21930.3 34.074 675 362 17 344 981 232 860 3.48e-103 343
Msa1255740 AT5G21930.4 33.950 595 335 15 344 902 232 804 2.02e-89 304
Msa1255740 AT4G30110.1 29.242 660 402 18 328 976 95 700 3.18e-71 255
Msa1255740 AT4G30110.2 29.242 660 402 18 328 976 95 700 3.18e-71 255
Msa1255740 AT2G19110.2 30.115 611 361 19 394 985 166 729 1.27e-64 238
Msa1255740 AT2G19110.3 30.115 611 361 19 394 985 166 729 1.27e-64 238
Msa1255740 AT2G19110.1 30.115 611 361 19 394 985 166 729 1.27e-64 238
Msa1255740 AT4G30120.2 31.111 360 208 13 394 748 3 327 1.99e-40 154
Msa1255740 AT4G37270.1 27.152 604 372 18 384 950 192 764 2.38e-39 158
Msa1255740 AT4G30120.1 25.880 568 329 22 191 748 1 486 3.24e-39 154
Msa1255740 AT1G17260.1 24.818 548 321 12 451 931 149 672 5.97e-28 122
Msa1255740 AT3G60330.4 24.377 562 331 18 452 950 145 675 9.40e-25 112
Msa1255740 AT3G60330.3 24.377 562 331 18 452 950 145 675 9.40e-25 112
Msa1255740 AT3G60330.2 24.199 562 332 18 452 950 145 675 1.92e-24 110
Msa1255740 AT3G60330.1 24.199 562 332 18 452 950 145 675 1.92e-24 110
Msa1255740 AT3G47950.1 23.870 553 348 14 452 950 150 683 5.19e-23 106
Msa1255740 AT3G47950.2 23.870 553 348 14 452 950 150 683 5.19e-23 106
Msa1255740 AT5G62670.1 23.146 553 352 13 452 950 146 679 7.60e-23 105
Msa1255740 AT2G07560.1 23.616 542 323 13 449 928 144 656 2.06e-22 104
Msa1255740 AT2G18960.1 24.324 555 315 14 452 939 142 658 2.38e-22 104
Msa1255740 AT2G18960.3 24.324 555 315 14 452 939 78 594 2.91e-22 103
Msa1255740 AT2G18960.2 24.324 555 315 14 452 939 78 594 2.91e-22 103
Msa1255740 AT3G42640.1 23.852 566 336 17 449 950 144 678 9.04e-22 102
Msa1255740 AT2G24520.3 24.237 557 313 15 452 939 124 640 4.09e-21 100
Msa1255740 AT2G24520.1 24.237 557 313 15 452 939 124 640 4.09e-21 100
Msa1255740 AT2G24520.2 24.237 557 313 15 452 939 187 703 4.98e-21 100
Msa1255740 AT4G29900.1 22.638 614 354 14 440 933 249 861 7.98e-20 96.3
Msa1255740 AT4G29900.2 22.638 614 354 14 440 933 249 861 7.98e-20 96.3
Msa1255740 AT4G37640.1 32.768 177 90 3 784 931 649 825 1.09e-19 95.9
Msa1255740 AT1G27770.3 32.768 177 90 3 784 931 589 765 4.61e-19 93.6
Msa1255740 AT1G27770.4 32.768 177 90 3 784 931 652 828 4.77e-19 93.6
Msa1255740 AT1G27770.1 32.768 177 90 3 784 931 652 828 4.77e-19 93.6
Msa1255740 AT2G41560.1 32.402 179 93 2 783 933 643 821 5.84e-19 93.2
Msa1255740 AT2G41560.2 32.402 179 93 2 783 933 541 719 5.88e-19 93.2
Msa1255740 AT2G41560.3 32.402 179 93 2 783 933 541 719 5.88e-19 93.2
Msa1255740 AT2G41560.4 32.402 179 93 2 783 933 541 719 5.88e-19 93.2
Msa1255740 AT3G57330.1 32.402 179 93 2 783 933 640 818 6.03e-19 93.2
Msa1255740 AT3G57330.2 32.402 179 93 2 783 933 585 763 6.72e-19 93.2
Msa1255740 AT2G22950.1 31.638 177 92 3 784 931 650 826 7.04e-19 93.2
Msa1255740 AT3G21180.1 28.261 184 99 2 783 933 691 874 2.94e-17 87.8
Msa1255740 AT2G24520.4 25.243 412 210 10 600 939 12 397 4.92e-17 86.7
Msa1255740 AT5G57110.1 27.717 184 100 2 783 933 674 857 5.31e-17 87.0
Msa1255740 AT5G57110.3 27.717 184 100 2 783 933 674 857 5.31e-17 87.0
Msa1255740 AT5G57110.2 27.717 184 100 2 783 933 674 857 5.31e-17 87.0
Msa1255740 AT5G57350.3 31.915 188 91 3 782 939 217 397 5.83e-17 86.3
Msa1255740 AT5G57350.4 31.915 188 91 3 782 939 479 659 7.51e-17 86.3
Msa1255740 AT5G57350.2 31.915 188 91 3 782 939 479 659 7.51e-17 86.3
Msa1255740 AT5G57350.1 31.915 188 91 3 782 939 479 659 7.51e-17 86.3
Msa1255740 AT4G30190.1 31.915 188 91 2 782 939 478 658 8.18e-17 86.3
Msa1255740 AT1G07670.2 27.528 178 97 2 783 928 621 798 2.46e-16 84.7
Msa1255740 AT1G07670.1 27.528 178 97 2 783 928 621 798 2.46e-16 84.7
Msa1255740 AT1G07810.1 27.528 178 97 2 783 928 621 798 3.02e-16 84.7
Msa1255740 AT3G22910.1 28.261 184 99 2 783 933 636 819 1.35e-15 82.4
Msa1255740 AT1G10130.1 27.451 204 110 3 777 942 572 775 1.47e-15 82.4
Msa1255740 AT3G63380.1 27.451 204 114 3 764 933 620 823 3.44e-15 81.3
Msa1255740 AT1G80660.2 29.944 177 94 1 782 928 354 530 8.00e-15 79.7
Msa1255740 AT1G80660.4 29.944 177 94 1 782 928 483 659 1.02e-14 79.3
Msa1255740 AT1G80660.1 29.944 177 94 1 782 928 483 659 1.03e-14 79.3
Msa1255740 AT1G80660.3 29.944 177 94 1 782 928 483 659 1.04e-14 79.3
Msa1255740 AT4G00900.2 27.778 180 96 3 783 928 615 794 1.34e-13 75.9
Msa1255740 AT4G00900.1 27.778 180 96 3 783 928 615 794 1.34e-13 75.9
Msa1255740 AT4G30190.2 41.414 99 51 1 841 939 600 691 3.87e-12 71.2

Find 192 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATGGTATCCATGATTT+TGG 0.108191 8_2:-54811143 None:intergenic
GATACTTTAAATTGTTAATT+TGG 0.138620 8_2:+54810027 Msa1255740:CDS
AAATCTGGTCAGCATATTTC+TGG 0.165291 8_2:-54810811 None:intergenic
CTAAATTACATTTGGGCTTT+AGG 0.167127 8_2:+54813275 Msa1255740:CDS
CATGGCTCAAACAGGAATTT+TGG 0.195063 8_2:+54812191 Msa1255740:CDS
ACCTTTGCTCAAAGCTTTAT+AGG 0.215149 8_2:-54810225 None:intergenic
TGGGGAAATTGTTGGAGTTT+TGG 0.216418 8_2:+54812224 Msa1255740:CDS
CCCCTTTGCTTATTAATATA+GGG 0.226562 8_2:-54809734 None:intergenic
CATACTTGGTGGCAGAATTC+TGG 0.236557 8_2:+54813062 Msa1255740:intron
TTCTATTCTGTTTATGTTGT+TGG 0.237087 8_2:+54810296 Msa1255740:CDS
TAATGGTGACAGGTGATAAT+TGG 0.244399 8_2:+54812319 Msa1255740:CDS
TGAGTGTAGCTTATAATCTT+TGG 0.245165 8_2:-54809678 None:intergenic
TATTCTACTTGGCAAGTATT+TGG 0.258143 8_2:+54810388 Msa1255740:CDS
CTGAATAACTTGGAGATTAA+TGG 0.264775 8_2:+54813455 Msa1255740:CDS
ATTGTCAATATGTTGAATAT+TGG 0.283011 8_2:+54810134 Msa1255740:CDS
ATGAGTTCAATGAAGGTTCT+TGG 0.287670 8_2:-54809918 None:intergenic
TGTTCAAAACAAGGAAATAA+TGG 0.301600 8_2:+54812089 Msa1255740:CDS
AAAATTGAACTTAAAATTGA+TGG 0.308965 8_2:+54809768 Msa1255740:CDS
AGGCTACCACCTTGGATTGC+TGG 0.311724 8_2:+54813356 Msa1255740:CDS
ACTATCATCTTCCATGGATT+TGG 0.319744 8_2:-54809499 None:intergenic
AATGTCTAAATATGTTTCTA+TGG 0.322277 8_2:-54809856 None:intergenic
GTTCTTGGACCGGTCATATA+AGG 0.326179 8_2:-54809903 None:intergenic
ATCGATGACGACGTTCCTTT+AGG 0.333985 8_2:-54807290 None:intergenic
ATTGAACTCATTGAATCTTC+AGG 0.339049 8_2:+54809930 Msa1255740:CDS
TACTAAAGTAAAGGAATTGC+AGG 0.342890 8_2:+54812416 Msa1255740:CDS
TGCAAGCTCAAAACTATTCA+TGG 0.345012 8_2:-54811165 None:intergenic
ATAGCTTGTCCTTGTGCTCT+AGG 0.346551 8_2:+54811215 Msa1255740:CDS
TCCCCTTTGCTTATTAATAT+AGG 0.347780 8_2:-54809735 None:intergenic
TCTCATGAAGAGTAACTTAG+AGG 0.350334 8_2:+54813202 Msa1255740:CDS
AAAGAATTTGTATCTATTGC+AGG 0.354477 8_2:+54812048 Msa1255740:CDS
CTCTTACAACATGGATATCA+TGG 0.354672 8_2:+54811093 Msa1255740:CDS
GTTAGTAAGGTTGCTGTATC+AGG 0.355494 8_2:-54810467 None:intergenic
ATGACATGTGCTGCCTGTGC+TGG 0.357393 8_2:+54807362 Msa1255740:CDS
ATTTGGAAGTGTTGGCTAAA+GGG 0.358609 8_2:+54810405 Msa1255740:CDS
TCAACAATGGACTTTGCTAT+TGG 0.359587 8_2:-54811970 None:intergenic
TTTGAGCTTGCACTTCAGTT+TGG 0.367139 8_2:+54811176 Msa1255740:CDS
ATATCATTGAACAATCTCTT+AGG 0.367455 8_2:+54809814 Msa1255740:CDS
AATACCAGGTAAACGTTTGA+TGG 0.367794 8_2:-54807399 None:intergenic
CTCATTGAATCTTCAGGATC+AGG 0.369788 8_2:+54809936 Msa1255740:CDS
GGTGCTTGGGAATGCATAAA+TGG 0.370898 8_2:+54807200 Msa1255740:CDS
TATACGTCTAAATTACATTT+GGG 0.371723 8_2:+54813268 Msa1255740:CDS
AAGACAGGAACTCTGACTAT+TGG 0.375068 8_2:+54811451 Msa1255740:CDS
AATGGTGACAGGTGATAATT+GGG 0.389397 8_2:+54812320 Msa1255740:CDS
GAACAAAGTATTTAGAAATC+TGG 0.389901 8_2:-54810826 None:intergenic
ACTAACTCTTGATGATGATA+AGG 0.390882 8_2:+54810484 Msa1255740:CDS
GTATACGTCTAAATTACATT+TGG 0.391057 8_2:+54813267 Msa1255740:CDS
AGTTCGTAGAAATCTTTAAC+TGG 0.397341 8_2:-54811514 None:intergenic
ATCATCATCAAGAGTTAGTA+AGG 0.402245 8_2:-54810480 None:intergenic
ACTTTAGTAGCTTTAGTCTC+AGG 0.403729 8_2:-54812402 None:intergenic
CATGGATTTGTTGATAGCAT+TGG 0.403773 8_2:+54810256 Msa1255740:CDS
TGCATTCATTCCCAAAATCA+TGG 0.404748 8_2:+54811132 Msa1255740:CDS
ATGGATTTGTTGATAGCATT+GGG 0.405336 8_2:+54810257 Msa1255740:CDS
GATGATAAGGGAAATGTTAT+AGG 0.408930 8_2:+54810497 Msa1255740:CDS
TATTTGAAACAAAGTGTTGT+TGG 0.409780 8_2:-54809523 None:intergenic
CTAACTCTTGATGATGATAA+GGG 0.413373 8_2:+54810485 Msa1255740:CDS
TGAATATTGGATTGCTCATA+AGG 0.413770 8_2:+54810147 Msa1255740:CDS
TATAAGCTACACTCAACTAA+TGG 0.414425 8_2:+54809686 Msa1255740:CDS
AAAAGTATGCCAGCAGCAAT+AGG 0.418214 8_2:-54813317 None:intergenic
ACCCTATATTAATAAGCAAA+GGG 0.421164 8_2:+54809733 Msa1255740:CDS
TCACCCTTCATCTTAGCAAC+AGG 0.422708 8_2:-54810659 None:intergenic
AGACAGGAACTCTGACTATT+GGG 0.427560 8_2:+54811452 Msa1255740:CDS
AATCTGTGAGAGTGCAGTTT+CGG 0.429782 8_2:-54810747 None:intergenic
CTAGCCATTCCTATTGCTGC+TGG 0.431313 8_2:+54813308 Msa1255740:CDS
ACACCAGTACAATTTGTCAT+AGG 0.432543 8_2:+54810182 Msa1255740:CDS
CATGTTAAGGTAACAAGGGT+TGG 0.441522 8_2:+54810722 Msa1255740:CDS
TGCTAAGATGAAGGGTGATA+TGG 0.444253 8_2:+54810664 Msa1255740:CDS
AAAATCACTTCCTTCAAAAT+GGG 0.444783 8_2:-54810336 None:intergenic
GGTAGCCTAAATCTAGTAGA+AGG 0.450781 8_2:-54813341 None:intergenic
TGCATTGTGTTTGATAAGAC+AGG 0.453034 8_2:+54811436 Msa1255740:CDS
TTCTGCTTCTTCAGTTGCTA+AGG 0.455731 8_2:-54809643 None:intergenic
TGTGCGCACTTTCTAATGCT+TGG 0.459345 8_2:-54811310 None:intergenic
CATTGAAGATGCTGGATTTG+AGG 0.464702 8_2:+54809476 Msa1255740:CDS
GCTGAAAACATGGCTCAAAC+AGG 0.465875 8_2:+54812183 Msa1255740:CDS
AATGAAAATAAAGAGCATAA+TGG 0.467111 8_2:+54812302 Msa1255740:CDS
GCCTATAAAGCTTTGAGCAA+AGG 0.468765 8_2:+54810224 Msa1255740:CDS
TATTTGGAAGTGTTGGCTAA+AGG 0.475035 8_2:+54810404 Msa1255740:CDS
AACCCTATATTAATAAGCAA+AGG 0.475803 8_2:+54809732 Msa1255740:CDS
CAGCTCTTCAATCCCTTCGT+GGG 0.479337 8_2:+54809601 Msa1255740:CDS
TGGCAAGTATTTGGAAGTGT+TGG 0.481436 8_2:+54810397 Msa1255740:CDS
CTCAAATCCAGCATCTTCAA+TGG 0.486228 8_2:-54809475 None:intergenic
TCAGCTCTTCAATCCCTTCG+TGG 0.486525 8_2:+54809600 Msa1255740:CDS
TTGGATTGCTGGAGCTGCAA+TGG 0.487123 8_2:+54813367 Msa1255740:CDS
GCACTAGTAGCAGCTGATGT+TGG 0.489521 8_2:+54813128 Msa1255740:CDS
TGGATATCATGGTTTGTAGC+TGG 0.490244 8_2:+54811104 Msa1255740:CDS
ACAAGCTATCGCGAAACTCA+TGG 0.491462 8_2:+54810436 Msa1255740:CDS
ACAATATTTCCAAATGATGA+TGG 0.492720 8_2:+54809972 Msa1255740:CDS
CTTCCTATGACAAATTGTAC+TGG 0.493139 8_2:-54810185 None:intergenic
GTTGGAACTATCATCTTCCA+TGG 0.493276 8_2:-54809505 None:intergenic
TCCAAGTTATTCAGCTTGGT+TGG 0.493343 8_2:-54813446 None:intergenic
TAAAGGAACGTCGTCATCGA+TGG 0.493470 8_2:+54807292 Msa1255740:CDS
AATCTCCAAGTTATTCAGCT+TGG 0.494811 8_2:-54813450 None:intergenic
TTCAATGAAGGTTCTTGGAC+CGG 0.496093 8_2:-54809913 None:intergenic
TGCTATTTGCACCCCACGAA+GGG 0.498106 8_2:-54809613 None:intergenic
ACCAACCAAGCTGAATAACT+TGG 0.498362 8_2:+54813445 Msa1255740:CDS
CGTGAGGCCATTGAAGATGC+TGG 0.500885 8_2:+54809468 Msa1255740:CDS
ATCATCATTTGGAAATATTG+TGG 0.502032 8_2:-54809970 None:intergenic
GTTGGAATGGCAATTGGTGC+TGG 0.502064 8_2:+54813146 Msa1255740:CDS
AATTCTATTGCTAGACAAGC+TGG 0.504479 8_2:+54812351 Msa1255740:CDS
TCATTGGATGGGGAAATTGT+TGG 0.506185 8_2:+54812216 Msa1255740:CDS
ACTTGTTGAGTCTGCTCAGA+TGG 0.506554 8_2:+54810775 Msa1255740:CDS
AAGAGCTGATTGCACATTGG+AGG 0.507470 8_2:-54809586 None:intergenic
GCTGATGTTGGAATGGCAAT+TGG 0.508224 8_2:+54813140 Msa1255740:CDS
TCAAAACTATTCATGGAAGA+TGG 0.508510 8_2:-54811158 None:intergenic
AAAGCCTGTTGCTAAGATGA+AGG 0.510906 8_2:+54810655 Msa1255740:CDS
AGCCACTCCTACAGCGGTCA+TGG 0.513949 8_2:+54811241 Msa1255740:CDS
ACTTATAAACCTTATATGAC+CGG 0.516568 8_2:+54809894 Msa1255740:CDS
ATGAAGGGTGATATGGTGAT+TGG 0.516775 8_2:+54810671 Msa1255740:CDS
GTGAAAGAGAAATTGATAGC+AGG 0.519960 8_2:+54810519 Msa1255740:CDS
GTCATGGTTGGTACCGGAGT+TGG 0.522797 8_2:+54811257 Msa1255740:CDS
GTAAATGAGAGTATGATAAC+TGG 0.523529 8_2:+54810626 Msa1255740:CDS
AACGCAGAAAACAACAGTTA+TGG 0.524614 8_2:-54807333 None:intergenic
GGATACACTGTAGGAATGGT+AGG 0.525626 8_2:+54813083 Msa1255740:CDS
TGGTCAGCATATTTCTGGAC+TGG 0.527297 8_2:-54810806 None:intergenic
AGATTCAATGAGTTCAATGA+AGG 0.527436 8_2:-54809925 None:intergenic
GACTAAAGCTACTAAAGTAA+AGG 0.529942 8_2:+54812407 Msa1255740:CDS
TTTCTATGGTTTCAACACCT+TGG 0.531148 8_2:-54809842 None:intergenic
ACAGCGGTCATGGTTGGTAC+CGG 0.534259 8_2:+54811251 Msa1255740:CDS
CAAAACAAGGAAATAATGGT+TGG 0.535760 8_2:+54812093 Msa1255740:CDS
TGTCTTGAATGATAAAGCTC+AGG 0.535973 8_2:+54807439 Msa1255740:CDS
TTGTTGCTGCAGCAGAGGCA+AGG 0.537822 8_2:+54811536 Msa1255740:CDS
ACATCAGCTGCTACTAGTGC+TGG 0.539899 8_2:-54813125 None:intergenic
TGATGTGATCAAAGTTGTGC+CGG 0.544422 8_2:+54810556 Msa1255740:CDS
ACGTCGTCATCGATGGAAGA+AGG 0.548274 8_2:+54807299 Msa1255740:CDS
ATAAAGAGCATAATGGTGAC+AGG 0.549153 8_2:+54812309 Msa1255740:CDS
TCTAAAACATCTTTAACTCC+AGG 0.552204 8_2:-54810104 None:intergenic
GATAGTGTGACTCAGGTGAC+AGG 0.555624 8_2:-54807250 None:intergenic
TTCTGGATACACTGTAGGAA+TGG 0.557596 8_2:+54813079 Msa1255740:CDS
TTTGTATCTATTGCAGGACA+TGG 0.560376 8_2:+54812054 Msa1255740:CDS
GATGGAAGAAGGCTCAGAGC+TGG 0.560671 8_2:+54807310 Msa1255740:CDS
AAAGCCATCAAACGTTTACC+TGG 0.561493 8_2:+54807395 Msa1255740:CDS
CAGAATTCTGGATACACTGT+AGG 0.561507 8_2:+54813074 Msa1255740:intron
ATGAACAAAATCATTCATCA+TGG 0.562767 8_2:+54812016 Msa1255740:CDS
TCAGTTTGGAATTTCAGTCA+TGG 0.566870 8_2:+54811190 Msa1255740:CDS
CTAGATTTAGGCTACCACCT+TGG 0.567788 8_2:+54813348 Msa1255740:CDS
ACAACAGCCTCTCGAATACC+AGG 0.568117 8_2:-54807413 None:intergenic
GTGGCTAGGCCTAGAGCACA+AGG 0.569251 8_2:-54811224 None:intergenic
ACCTTGAGTTGCACCAACTC+CGG 0.571323 8_2:-54811270 None:intergenic
GAGCAAAGGTTATGCAAACA+TGG 0.571538 8_2:+54810238 Msa1255740:CDS
CGAACTTGTTGCTGCAGCAG+AGG 0.574506 8_2:+54811531 Msa1255740:CDS
TATTGGATTGCTCATAAGGT+GGG 0.575330 8_2:+54810151 Msa1255740:CDS
TTAGGATATGTCGTCATCGA+CGG 0.577012 8_2:-54807272 None:intergenic
ACCGGAGTTGGTGCAACTCA+AGG 0.578148 8_2:+54811269 Msa1255740:CDS
GGTGGTACTGTGAATGAGAA+TGG 0.580964 8_2:+54810692 Msa1255740:CDS
ACTAGCAGAAGCTGAAAACA+TGG 0.583541 8_2:+54812173 Msa1255740:CDS
AGTAGCAGCTGATGTTGGAA+TGG 0.584059 8_2:+54813133 Msa1255740:CDS
GGGTTACACTTGCAGTGCTG+TGG 0.586770 8_2:+54807224 Msa1255740:CDS
AAGGGTGATATGGTGATTGG+TGG 0.590370 8_2:+54810674 Msa1255740:CDS
AGCATTAGAAAGTGCGCACA+AGG 0.592786 8_2:+54811313 Msa1255740:CDS
TCATTGAATCTTCAGGATCA+GGG 0.598992 8_2:+54809937 Msa1255740:CDS
AACCATGACCGCTGTAGGAG+TGG 0.599538 8_2:-54811243 None:intergenic
GGTTACACTTGCAGTGCTGT+GGG 0.600608 8_2:+54807225 Msa1255740:CDS
AAGCCTGTTGCTAAGATGAA+GGG 0.600773 8_2:+54810656 Msa1255740:CDS
TTGAAGAGCTGATTGCACAT+TGG 0.601857 8_2:-54809589 None:intergenic
TGACCGCTGTAGGAGTGGCT+AGG 0.602822 8_2:-54811238 None:intergenic
TGGATTTGAGGCCAAATCCA+TGG 0.603953 8_2:+54809488 Msa1255740:CDS
TTGTGTTATCTCTTACAACA+TGG 0.604454 8_2:+54811084 Msa1255740:CDS
TGGGGTGCAAATAGCACAAG+TGG 0.611430 8_2:+54809620 Msa1255740:CDS
ACTGTAGGAATGGTAGGAGA+TGG 0.612600 8_2:+54813089 Msa1255740:CDS
CAAGGTGTGTTGATCAAAGG+TGG 0.614870 8_2:+54811287 Msa1255740:CDS
ATGGTTCTTATGTATATACC+TGG 0.615086 8_2:+54810086 Msa1255740:CDS
ACTCCTACAGCGGTCATGGT+TGG 0.617392 8_2:+54811245 Msa1255740:CDS
CTTGGGAATGCATAAATGGA+GGG 0.618666 8_2:+54807204 Msa1255740:CDS
ATTGCAGCTCCAGCAATCCA+AGG 0.621783 8_2:-54813365 None:intergenic
TATTGAAACTGTCATGGCTG+AGG 0.621886 8_2:+54812374 Msa1255740:CDS
TCGATGACGACATATCCTAA+AGG 0.622723 8_2:+54807275 Msa1255740:CDS
ATCGACGGATAGTGTGACTC+AGG 0.623312 8_2:-54807257 None:intergenic
GGCGCAAAAGTAGCATCAGA+TGG 0.626608 8_2:+54810578 Msa1255740:CDS
GATGTGATCAAAGTTGTGCC+GGG 0.629015 8_2:+54810557 Msa1255740:CDS
GTGCTATTTGCACCCCACGA+AGG 0.629621 8_2:-54809614 None:intergenic
ATATTGGATTGCTCATAAGG+TGG 0.629989 8_2:+54810150 Msa1255740:CDS
AGCTCTTCAATCCCTTCGTG+GGG 0.630501 8_2:+54809602 Msa1255740:CDS
TTTCTCAACAGATCCAGCAC+AGG 0.634499 8_2:-54807375 None:intergenic
GTACCAACCATGACCGCTGT+AGG 0.635820 8_2:-54811248 None:intergenic
CAAATATGTAGAGTACACAT+AGG 0.636295 8_2:+54809540 Msa1255740:CDS
TATTGCAGGACATGGAGTGA+AGG 0.637874 8_2:+54812062 Msa1255740:CDS
GAAGGCAATTGTTCAAAACA+AGG 0.642903 8_2:+54812080 Msa1255740:CDS
TATGCCAGCAGCAATAGGAA+TGG 0.645015 8_2:-54813312 None:intergenic
TCATAACATAGCTATTTCAG+TGG 0.645859 8_2:+54812137 Msa1255740:CDS
AGGCCTAGCCACTCCTACAG+CGG 0.649430 8_2:+54811235 Msa1255740:CDS
ACGTTTACCTGGTATTCGAG+AGG 0.650760 8_2:+54807406 Msa1255740:CDS
CAATCTCTTAGGACACTCCA+AGG 0.653190 8_2:+54809825 Msa1255740:CDS
TTTGCATGTTAAGGTAACAA+GGG 0.654335 8_2:+54810718 Msa1255740:CDS
ACTCAAGGTGTGTTGATCAA+AGG 0.657349 8_2:+54811284 Msa1255740:CDS
ATGGAAACTATATCAAACAC+AGG 0.661215 8_2:+54809705 Msa1255740:CDS
AGCTGGTATTGAAACTGTCA+TGG 0.661486 8_2:+54812368 Msa1255740:CDS
GCTTGGGAATGCATAAATGG+AGG 0.664067 8_2:+54807203 Msa1255740:CDS
CCCTATATTAATAAGCAAAG+GGG 0.671266 8_2:+54809734 Msa1255740:CDS
ATATGTAGAGTACACATAGG+TGG 0.685983 8_2:+54809543 Msa1255740:CDS
TCTGACTATTGGGAAGCCAG+TGG 0.686617 8_2:+54811462 Msa1255740:CDS
ACAGGAAGAGAGCATACGTG+AGG 0.715485 8_2:+54809452 Msa1255740:intron
GCAGCTCCAGCAATCCAAGG+TGG 0.740644 8_2:-54813362 None:intergenic
ATGGTGACAGGTGATAATTG+GGG 0.767964 8_2:+54812321 Msa1255740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTATAATGTTTCT+TGG + chr8_2:54807555-54807574 Msa1255740:intron 10.0%
!!! TTAATTATTTTTTAGATTGT+AGG + chr8_2:54807964-54807983 Msa1255740:intron 10.0%
!!! AATAGTATTTAGTATATTTT+AGG - chr8_2:54808127-54808146 None:intergenic 10.0%
!!! TATTGATTTTTTTTCTTTTT+TGG + chr8_2:54808330-54808349 Msa1255740:intron 10.0%
!!! AGATTTTTCAATTAATAAAA+AGG - chr8_2:54808399-54808418 None:intergenic 10.0%
!!! TTATATTTTTTAGTAGATAA+CGG + chr8_2:54809381-54809400 Msa1255740:intron 10.0%
!! ATATACTATATAGATTAAAT+TGG + chr8_2:54811761-54811780 Msa1255740:intron 10.0%
!! TATACTATATAGATTAAATT+GGG + chr8_2:54811762-54811781 Msa1255740:intron 10.0%
!! AGAAAAACAATACTTAAAAA+GGG - chr8_2:54808053-54808072 None:intergenic 15.0%
!! AAGAAAAACAATACTTAAAA+AGG - chr8_2:54808054-54808073 None:intergenic 15.0%
!!! CTAAATACTATTTTTTTAGA+AGG + chr8_2:54808135-54808154 Msa1255740:intron 15.0%
!!! GTAATTTGTTTTTTTTTTGT+TGG - chr8_2:54808496-54808515 None:intergenic 15.0%
!! ATATTGATATATGCAAAAAT+TGG + chr8_2:54808898-54808917 Msa1255740:intron 15.0%
!! AATATAAATATGCCAATTAT+AGG - chr8_2:54809368-54809387 None:intergenic 15.0%
!! AAAATTGAACTTAAAATTGA+TGG + chr8_2:54809768-54809787 Msa1255740:CDS 15.0%
!! GATACTTTAAATTGTTAATT+TGG + chr8_2:54810027-54810046 Msa1255740:CDS 15.0%
!! TAATAATTTAGACTTACTAT+AGG - chr8_2:54810851-54810870 None:intergenic 15.0%
!! TAAACATTTAAGTCAAATAA+TGG + chr8_2:54811016-54811035 Msa1255740:intron 15.0%
!! ATAGTTATATCTATATGATT+AGG + chr8_2:54811933-54811952 Msa1255740:intron 15.0%
!! AATCTAAACAAAATATTTAG+TGG + chr8_2:54812722-54812741 Msa1255740:intron 15.0%
!! ATCTAAACAAAATATTTAGT+GGG + chr8_2:54812723-54812742 Msa1255740:intron 15.0%
!! TTATTTAAGTACAATTACTT+TGG - chr8_2:54812754-54812773 None:intergenic 15.0%
!! AAAAATTGAATGAAAAATGA+AGG - chr8_2:54812913-54812932 None:intergenic 15.0%
!! ATATAGGGTTAATATATTTA+TGG - chr8_2:54813010-54813029 None:intergenic 15.0%
!! GATTGTCTAAATATTATATA+GGG - chr8_2:54813025-54813044 None:intergenic 15.0%
!! AGATTGTCTAAATATTATAT+AGG - chr8_2:54813026-54813045 None:intergenic 15.0%
!!! CAATTAAAATGAAACAGTTT+TGG - chr8_2:54808078-54808097 None:intergenic 20.0%
!! ATTCCAAAAAAAGTTATCAT+GGG - chr8_2:54808588-54808607 None:intergenic 20.0%
!!! AATTAGTTTTAGCAATTTGA+GGG - chr8_2:54808877-54808896 None:intergenic 20.0%
!! TTTCGCTAATTATAAATAAG+AGG + chr8_2:54808994-54809013 Msa1255740:intron 20.0%
!! TTCGCTAATTATAAATAAGA+GGG + chr8_2:54808995-54809014 Msa1255740:intron 20.0%
!! ACAAAATATATGCGTTATTA+TGG - chr8_2:54809430-54809449 None:intergenic 20.0%
!!! AATGTCTAAATATGTTTCTA+TGG - chr8_2:54809859-54809878 None:intergenic 20.0%
!! ATTGTCAATATGTTGAATAT+TGG + chr8_2:54810134-54810153 Msa1255740:CDS 20.0%
!!! CTTATTTCTTTTATTCTACT+TGG + chr8_2:54810377-54810396 Msa1255740:CDS 20.0%
!!! TTTAGTCTTCATAAAAATCA+CGG - chr8_2:54810916-54810935 None:intergenic 20.0%
!! ATATGAAAATCAGTTATGTT+AGG - chr8_2:54811689-54811708 None:intergenic 20.0%
!! TTAGTCTATTTGGAAATTAA+TGG + chr8_2:54811875-54811894 Msa1255740:intron 20.0%
!!! AATGAAAATAAAGAGCATAA+TGG + chr8_2:54812302-54812321 Msa1255740:CDS 20.0%
!! AACTCATATTTAAACCAAAA+AGG - chr8_2:54812516-54812535 None:intergenic 20.0%
!! ATCCAAACAAAAAAAACTTA+CGG - chr8_2:54812570-54812589 None:intergenic 20.0%
!! AATCTTTACAAATTCAAACA+CGG - chr8_2:54812701-54812720 None:intergenic 20.0%
!!! ATTGCAAATTTTTTTGAACT+CGG - chr8_2:54812862-54812881 None:intergenic 20.0%
!! TATACGTCTAAATTACATTT+GGG + chr8_2:54813268-54813287 Msa1255740:CDS 20.0%
! CAAGTGTGTGTATATATAAT+TGG - chr8_2:54807873-54807892 None:intergenic 25.0%
! AACAATACTTAAAAAGGGAA+CGG - chr8_2:54808048-54808067 None:intergenic 25.0%
! TACCTCAAAATATAATCTAG+AGG + chr8_2:54808513-54808532 Msa1255740:intron 25.0%
!! TTCCTCTAGATTATATTTTG+AGG - chr8_2:54808518-54808537 None:intergenic 25.0%
! AAAAAAAGTTATCATGGGAA+TGG - chr8_2:54808583-54808602 None:intergenic 25.0%
!!! ATTCCCATGATAACTTTTTT+TGG + chr8_2:54808582-54808601 Msa1255740:intron 25.0%
! GATTCCAAAAAAAGTTATCA+TGG - chr8_2:54808589-54808608 None:intergenic 25.0%
!!! TAAGAGGAATTCTTTTGATT+TGG - chr8_2:54808693-54808712 None:intergenic 25.0%
! GAACATTTGTTTGCAAAATA+TGG - chr8_2:54808838-54808857 None:intergenic 25.0%
!!! CAATTAGTTTTAGCAATTTG+AGG - chr8_2:54808878-54808897 None:intergenic 25.0%
! TCGCTAATTATAAATAAGAG+GGG + chr8_2:54808996-54809015 Msa1255740:intron 25.0%
!!! ATTTTTTTGTGTTAACCTTC+CGG + chr8_2:54809121-54809140 Msa1255740:intron 25.0%
!!! TATTTGAAACAAAGTGTTGT+TGG - chr8_2:54809526-54809545 None:intergenic 25.0%
! AACCCTATATTAATAAGCAA+AGG + chr8_2:54809732-54809751 Msa1255740:CDS 25.0%
! ACCCTATATTAATAAGCAAA+GGG + chr8_2:54809733-54809752 Msa1255740:CDS 25.0%
! ATATCATTGAACAATCTCTT+AGG + chr8_2:54809814-54809833 Msa1255740:CDS 25.0%
! ACTTATAAACCTTATATGAC+CGG + chr8_2:54809894-54809913 Msa1255740:CDS 25.0%
! ATCATCATTTGGAAATATTG+TGG - chr8_2:54809973-54809992 None:intergenic 25.0%
! ACAATATTTCCAAATGATGA+TGG + chr8_2:54809972-54809991 Msa1255740:CDS 25.0%
!!! TCCTGTTTTTTTAACATCTA+TGG + chr8_2:54810067-54810086 Msa1255740:CDS 25.0%
! ACCATAGATGTTAAAAAAAC+AGG - chr8_2:54810071-54810090 None:intergenic 25.0%
!! ATAGGAAGAAGATTTTATGT+TGG + chr8_2:54810200-54810219 Msa1255740:CDS 25.0%
! TTCTATTCTGTTTATGTTGT+TGG + chr8_2:54810296-54810315 Msa1255740:CDS 25.0%
! AAAATCACTTCCTTCAAAAT+GGG - chr8_2:54810339-54810358 None:intergenic 25.0%
! AAAAATCACTTCCTTCAAAA+TGG - chr8_2:54810340-54810359 None:intergenic 25.0%
!! GAACAAAGTATTTAGAAATC+TGG - chr8_2:54810829-54810848 None:intergenic 25.0%
!! GACAGATTTTATACACTTTA+CGG - chr8_2:54811636-54811655 None:intergenic 25.0%
!! TACTTTAGAGATTAAAACGA+TGG + chr8_2:54811708-54811727 Msa1255740:intron 25.0%
!! TTCATCTTGTGTGATATTTT+TGG - chr8_2:54812001-54812020 None:intergenic 25.0%
! ATGAACAAAATCATTCATCA+TGG + chr8_2:54812016-54812035 Msa1255740:CDS 25.0%
! AAAGAATTTGTATCTATTGC+AGG + chr8_2:54812048-54812067 Msa1255740:CDS 25.0%
! TGTTCAAAACAAGGAAATAA+TGG + chr8_2:54812089-54812108 Msa1255740:CDS 25.0%
! CATATTTAAACCAAAAAGGA+GGG - chr8_2:54812512-54812531 None:intergenic 25.0%
! TCATATTTAAACCAAAAAGG+AGG - chr8_2:54812513-54812532 None:intergenic 25.0%
! TCCAAACAAAAAAAACTTAC+GGG - chr8_2:54812569-54812588 None:intergenic 25.0%
! TGATAGTTATTTGACATACT+TGG + chr8_2:54813048-54813067 Msa1255740:intron 25.0%
! GTATACGTCTAAATTACATT+TGG + chr8_2:54813267-54813286 Msa1255740:CDS 25.0%
!! TTTTTCCTTCTACTAGATTT+AGG + chr8_2:54813336-54813355 Msa1255740:CDS 25.0%
!! TAAAAAGTTTGATGGTGCTT+GGG + chr8_2:54807187-54807206 Msa1255740:CDS 30.0%
ACATATACTCACGTTAACAA+TGG - chr8_2:54807480-54807499 None:intergenic 30.0%
! TATAATGTTTCTTGGCTCTT+AGG + chr8_2:54807563-54807582 Msa1255740:intron 30.0%
! TTTCTCTAGGAGATTACTTA+TGG + chr8_2:54807624-54807643 Msa1255740:intron 30.0%
! CGATCAAATTTTCAACTCAA+AGG - chr8_2:54808635-54808654 None:intergenic 30.0%
CAAGTGTTTAGGAGTAATTT+CGG - chr8_2:54808785-54808804 None:intergenic 30.0%
TATGAGTTCTTCAAGTGTTT+AGG - chr8_2:54808796-54808815 None:intergenic 30.0%
! ACAACGTTTTGCTTATAACA+TGG - chr8_2:54809075-54809094 None:intergenic 30.0%
! ATAGTTAGGACGAATTGTTT+TGG - chr8_2:54809207-54809226 None:intergenic 30.0%
AGTTACCTAAACGAATAGTT+AGG - chr8_2:54809221-54809240 None:intergenic 30.0%
! AACGCATATATTTTGTACAC+AGG + chr8_2:54809434-54809453 Msa1255740:intron 30.0%
CAAATATGTAGAGTACACAT+AGG + chr8_2:54809540-54809559 Msa1255740:CDS 30.0%
TGAGTGTAGCTTATAATCTT+TGG - chr8_2:54809681-54809700 None:intergenic 30.0%
TATAAGCTACACTCAACTAA+TGG + chr8_2:54809686-54809705 Msa1255740:CDS 30.0%
ATGGAAACTATATCAAACAC+AGG + chr8_2:54809705-54809724 Msa1255740:CDS 30.0%
CCCCTTTGCTTATTAATATA+GGG - chr8_2:54809737-54809756 None:intergenic 30.0%
CCCTATATTAATAAGCAAAG+GGG + chr8_2:54809734-54809753 Msa1255740:CDS 30.0%
TCCCCTTTGCTTATTAATAT+AGG - chr8_2:54809738-54809757 None:intergenic 30.0%
AGATTCAATGAGTTCAATGA+AGG - chr8_2:54809928-54809947 None:intergenic 30.0%
ATTGAACTCATTGAATCTTC+AGG + chr8_2:54809930-54809949 Msa1255740:CDS 30.0%
ATGGTTCTTATGTATATACC+TGG + chr8_2:54810086-54810105 Msa1255740:CDS 30.0%
! TCTAAAACATCTTTAACTCC+AGG - chr8_2:54810107-54810126 None:intergenic 30.0%
!! TGGAGTTAAAGATGTTTTAG+AGG + chr8_2:54810106-54810125 Msa1255740:CDS 30.0%
TGAATATTGGATTGCTCATA+AGG + chr8_2:54810147-54810166 Msa1255740:CDS 30.0%
!! ATGGATTTGTTGATAGCATT+GGG + chr8_2:54810257-54810276 Msa1255740:CDS 30.0%
! ACATTTTCTTCCCATTTTGA+AGG + chr8_2:54810326-54810345 Msa1255740:CDS 30.0%
TATTCTACTTGGCAAGTATT+TGG + chr8_2:54810388-54810407 Msa1255740:CDS 30.0%
ATCATCATCAAGAGTTAGTA+AGG - chr8_2:54810483-54810502 None:intergenic 30.0%
!! ACTAACTCTTGATGATGATA+AGG + chr8_2:54810484-54810503 Msa1255740:CDS 30.0%
!! CTAACTCTTGATGATGATAA+GGG + chr8_2:54810485-54810504 Msa1255740:CDS 30.0%
GATGATAAGGGAAATGTTAT+AGG + chr8_2:54810497-54810516 Msa1255740:CDS 30.0%
!!! ATCAGATGGTTTTGTTGTTT+GGG + chr8_2:54810592-54810611 Msa1255740:CDS 30.0%
! GTAAATGAGAGTATGATAAC+TGG + chr8_2:54810626-54810645 Msa1255740:CDS 30.0%
! TTTTGCATGTTAAGGTAACA+AGG + chr8_2:54810717-54810736 Msa1255740:CDS 30.0%
TTTGCATGTTAAGGTAACAA+GGG + chr8_2:54810718-54810737 Msa1255740:CDS 30.0%
TTGTGTTATCTCTTACAACA+TGG + chr8_2:54811084-54811103 Msa1255740:CDS 30.0%
! AAGATGGTATCCATGATTTT+GGG - chr8_2:54811145-54811164 None:intergenic 30.0%
TGAGTTTCCTAATGTTGAAA+TGG - chr8_2:54811388-54811407 None:intergenic 30.0%
AGTTCGTAGAAATCTTTAAC+TGG - chr8_2:54811517-54811536 None:intergenic 30.0%
!!! ATTTTTGGCATGATCAACAA+TGG - chr8_2:54811986-54812005 None:intergenic 30.0%
! GATACAAATTCTTTTGCTTC+TGG - chr8_2:54812042-54812061 None:intergenic 30.0%
CAAAACAAGGAAATAATGGT+TGG + chr8_2:54812093-54812112 Msa1255740:CDS 30.0%
! TCATAACATAGCTATTTCAG+TGG + chr8_2:54812137-54812156 Msa1255740:CDS 30.0%
!! AACAGGAATTTTGGTATCAT+TGG + chr8_2:54812200-54812219 Msa1255740:CDS 30.0%
!! GAATTTTGGTATCATTGGAT+GGG + chr8_2:54812205-54812224 Msa1255740:CDS 30.0%
!! AATTTTGGTATCATTGGATG+GGG + chr8_2:54812206-54812225 Msa1255740:CDS 30.0%
! GAAATAACTTCTTTTGCATC+AGG - chr8_2:54812270-54812289 None:intergenic 30.0%
GACTAAAGCTACTAAAGTAA+AGG + chr8_2:54812407-54812426 Msa1255740:CDS 30.0%
TACTAAAGTAAAGGAATTGC+AGG + chr8_2:54812416-54812435 Msa1255740:CDS 30.0%
AAGCAATAATTTGGGAAATG+GGG - chr8_2:54812460-54812479 None:intergenic 30.0%
GAAGCAATAATTTGGGAAAT+GGG - chr8_2:54812461-54812480 None:intergenic 30.0%
TGAAGCAATAATTTGGGAAA+TGG - chr8_2:54812462-54812481 None:intergenic 30.0%
AAGGAGTGAAGCAATAATTT+GGG - chr8_2:54812468-54812487 None:intergenic 30.0%
AAAGGAGTGAAGCAATAATT+TGG - chr8_2:54812469-54812488 None:intergenic 30.0%
AATTATTGCTTCACTCCTTT+AGG + chr8_2:54812469-54812488 Msa1255740:intron 30.0%
ATTATTGCTTCACTCCTTTA+GGG + chr8_2:54812470-54812489 Msa1255740:intron 30.0%
CCAAACAAAAAAAACTTACG+GGG - chr8_2:54812568-54812587 None:intergenic 30.0%
ATAACCGTTATTGAATTTGC+AGG - chr8_2:54812598-54812617 None:intergenic 30.0%
TAGTTATTTGACATACTTGG+TGG + chr8_2:54813051-54813070 Msa1255740:intron 30.0%
CTAAATTACATTTGGGCTTT+AGG + chr8_2:54813275-54813294 Msa1255740:CDS 30.0%
CTGAATAACTTGGAGATTAA+TGG + chr8_2:54813455-54813474 Msa1255740:CDS 30.0%
ATGGGTCGTAAAAAGTTTGA+TGG + chr8_2:54807179-54807198 Msa1255740:CDS 35.0%
!! GTAAAAAGTTTGATGGTGCT+TGG + chr8_2:54807186-54807205 Msa1255740:CDS 35.0%
AACGCAGAAAACAACAGTTA+TGG - chr8_2:54807336-54807355 None:intergenic 35.0%
!!! AACTGTTGTTTTCTGCGTTA+TGG + chr8_2:54807337-54807356 Msa1255740:CDS 35.0%
!!! ACTGTTGTTTTCTGCGTTAT+GGG + chr8_2:54807338-54807357 Msa1255740:CDS 35.0%
AATACCAGGTAAACGTTTGA+TGG - chr8_2:54807402-54807421 None:intergenic 35.0%
TGTCTTGAATGATAAAGCTC+AGG + chr8_2:54807439-54807458 Msa1255740:CDS 35.0%
ATACTCACGTTAACAATGGT+GGG - chr8_2:54807476-54807495 None:intergenic 35.0%
TATACTCACGTTAACAATGG+TGG - chr8_2:54807477-54807496 None:intergenic 35.0%
ATGTGTCTACTTCTTTCTCT+AGG + chr8_2:54807611-54807630 Msa1255740:intron 35.0%
ATACTTAAAAAGGGAACGGA+TGG - chr8_2:54808044-54808063 None:intergenic 35.0%
AAAGCAGAGATAAGTACAAG+AGG + chr8_2:54808427-54808446 Msa1255740:intron 35.0%
TTATCATGGGAATGGTTCAT+GGG - chr8_2:54808575-54808594 None:intergenic 35.0%
AAAGGATCTCAAAGTAGAAG+AGG - chr8_2:54808617-54808636 None:intergenic 35.0%
TTAGCAATTTGAGGGAATTC+TGG - chr8_2:54808869-54808888 None:intergenic 35.0%
! GTTTTGCTTATAACATGGCA+CGG - chr8_2:54809070-54809089 None:intergenic 35.0%
!!! ATCCAGGTTCGATTTTTTGT+GGG - chr8_2:54809181-54809200 None:intergenic 35.0%
!!! AATCCAGGTTCGATTTTTTG+TGG - chr8_2:54809182-54809201 None:intergenic 35.0%
!!! CGAATTGTTTTGGATAATCC+AGG - chr8_2:54809197-54809216 None:intergenic 35.0%
TTCGTCCTAACTATTCGTTT+AGG + chr8_2:54809213-54809232 Msa1255740:intron 35.0%
CAAAGTTGCACATGTTAGAA+AGG + chr8_2:54809283-54809302 Msa1255740:intron 35.0%
TGCGTTATTATGGTATGCAA+TGG - chr8_2:54809420-54809439 None:intergenic 35.0%
ACTATCATCTTCCATGGATT+TGG - chr8_2:54809502-54809521 None:intergenic 35.0%
ATATGTAGAGTACACATAGG+TGG + chr8_2:54809543-54809562 Msa1255740:CDS 35.0%
TTTCTATGGTTTCAACACCT+TGG - chr8_2:54809845-54809864 None:intergenic 35.0%
ATGAGTTCAATGAAGGTTCT+TGG - chr8_2:54809921-54809940 None:intergenic 35.0%
TCATTGAATCTTCAGGATCA+GGG + chr8_2:54809937-54809956 Msa1255740:CDS 35.0%
! GCTTTTCTTCCATCATCATT+TGG - chr8_2:54809984-54810003 None:intergenic 35.0%
ATATTGGATTGCTCATAAGG+TGG + chr8_2:54810150-54810169 Msa1255740:CDS 35.0%
TATTGGATTGCTCATAAGGT+GGG + chr8_2:54810151-54810170 Msa1255740:CDS 35.0%
ACACCAGTACAATTTGTCAT+AGG + chr8_2:54810182-54810201 Msa1255740:CDS 35.0%
CTTCCTATGACAAATTGTAC+TGG - chr8_2:54810188-54810207 None:intergenic 35.0%
! ACCTTTGCTCAAAGCTTTAT+AGG - chr8_2:54810228-54810247 None:intergenic 35.0%
!! CATGGATTTGTTGATAGCAT+TGG + chr8_2:54810256-54810275 Msa1255740:CDS 35.0%
!! TATTTGGAAGTGTTGGCTAA+AGG + chr8_2:54810404-54810423 Msa1255740:CDS 35.0%
!! ATTTGGAAGTGTTGGCTAAA+GGG + chr8_2:54810405-54810424 Msa1255740:CDS 35.0%
! GTGAAAGAGAAATTGATAGC+AGG + chr8_2:54810519-54810538 Msa1255740:CDS 35.0%
!!! CATCAGATGGTTTTGTTGTT+TGG + chr8_2:54810591-54810610 Msa1255740:CDS 35.0%
!!! TCAGATGGTTTTGTTGTTTG+GGG + chr8_2:54810593-54810612 Msa1255740:CDS 35.0%
! GAATGGTGTTTTGCATGTTA+AGG + chr8_2:54810709-54810728 Msa1255740:CDS 35.0%
AAATCTGGTCAGCATATTTC+TGG - chr8_2:54810814-54810833 None:intergenic 35.0%
ACAGAGCTTCAACAAAATCA+CGG + chr8_2:54810938-54810957 Msa1255740:intron 35.0%
!!! TAATTAGTGCCTGTTTTTGC+AGG + chr8_2:54811058-54811077 Msa1255740:intron 35.0%
CTCTTACAACATGGATATCA+TGG + chr8_2:54811093-54811112 Msa1255740:CDS 35.0%
TGCATTCATTCCCAAAATCA+TGG + chr8_2:54811132-54811151 Msa1255740:CDS 35.0%
! GAAGATGGTATCCATGATTT+TGG - chr8_2:54811146-54811165 None:intergenic 35.0%
! TCAGTTTGGAATTTCAGTCA+TGG + chr8_2:54811190-54811209 Msa1255740:CDS 35.0%
ACAAGGTGAGTGAATAACAT+TGG + chr8_2:54811330-54811349 Msa1255740:intron 35.0%
! CAACTTGCCATTTCAACATT+AGG + chr8_2:54811378-54811397 Msa1255740:intron 35.0%
!! CTTGTTGCTTACAATTTTGC+AGG + chr8_2:54811408-54811427 Msa1255740:intron 35.0%
TGCATTGTGTTTGATAAGAC+AGG + chr8_2:54811436-54811455 Msa1255740:CDS 35.0%
!! AGTTTTGTAGTTACAACCAC+TGG - chr8_2:54811481-54811500 None:intergenic 35.0%
! TCAACAATGGACTTTGCTAT+TGG - chr8_2:54811973-54811992 None:intergenic 35.0%
TTTGTATCTATTGCAGGACA+TGG + chr8_2:54812054-54812073 Msa1255740:CDS 35.0%
GAAGGCAATTGTTCAAAACA+AGG + chr8_2:54812080-54812099 Msa1255740:CDS 35.0%
!! GGAATTTTGGTATCATTGGA+TGG + chr8_2:54812204-54812223 Msa1255740:CDS 35.0%
! TCTTTTGCATCAGGTTTCAA+TGG - chr8_2:54812261-54812280 None:intergenic 35.0%
! ATAAAGAGCATAATGGTGAC+AGG + chr8_2:54812309-54812328 Msa1255740:CDS 35.0%
TAATGGTGACAGGTGATAAT+TGG + chr8_2:54812319-54812338 Msa1255740:CDS 35.0%
AATGGTGACAGGTGATAATT+GGG + chr8_2:54812320-54812339 Msa1255740:CDS 35.0%
AATTCTATTGCTAGACAAGC+TGG + chr8_2:54812351-54812370 Msa1255740:CDS 35.0%
!! ACTTTAGTAGCTTTAGTCTC+AGG - chr8_2:54812405-54812424 None:intergenic 35.0%
TGCAGGTACACACAAAATTA+TGG + chr8_2:54812433-54812452 Msa1255740:intron 35.0%
AAAAAGGAGGGAAACAATGA+GGG - chr8_2:54812500-54812519 None:intergenic 35.0%
GGGATTAAAACCTACACTAA+CGG - chr8_2:54812548-54812567 None:intergenic 35.0%
!!! CCCCGTAAGTTTTTTTTGTT+TGG + chr8_2:54812565-54812584 Msa1255740:intron 35.0%
CAGTCCTGCAAATTCAATAA+CGG + chr8_2:54812591-54812610 Msa1255740:intron 35.0%
! CCACGTTACGTGATTTTATT+GGG + chr8_2:54812646-54812665 Msa1255740:intron 35.0%
AATAATCAATAAGCCCCTCT+AGG + chr8_2:54812769-54812788 Msa1255740:intron 35.0%
CATTCAGGAAAACTCGAATT+CGG + chr8_2:54812798-54812817 Msa1255740:intron 35.0%
TCTCATGAAGAGTAACTTAG+AGG + chr8_2:54813202-54813221 Msa1255740:CDS 35.0%
! AGTTTTCTTTGCAAGGTCAA+TGG - chr8_2:54813240-54813259 None:intergenic 35.0%
! GTGAGAAAGTTTTCTTTGCA+AGG - chr8_2:54813247-54813266 None:intergenic 35.0%
AATCTCCAAGTTATTCAGCT+TGG - chr8_2:54813453-54813472 None:intergenic 35.0%
CTTGGGAATGCATAAATGGA+GGG + chr8_2:54807204-54807223 Msa1255740:CDS 40.0%
TTAGGATATGTCGTCATCGA+CGG - chr8_2:54807275-54807294 None:intergenic 40.0%
TCGATGACGACATATCCTAA+AGG + chr8_2:54807275-54807294 Msa1255740:CDS 40.0%
AAAGCCATCAAACGTTTACC+TGG + chr8_2:54807395-54807414 Msa1255740:CDS 40.0%
CACTTGCATCTGATCAGTTA+AGG + chr8_2:54807887-54807906 Msa1255740:intron 40.0%
ATCAGTTAAGGAAGCTGAAG+AGG + chr8_2:54807899-54807918 Msa1255740:intron 40.0%
GTTATCATGGGAATGGTTCA+TGG - chr8_2:54808576-54808595 None:intergenic 40.0%
GACGTTGTGGCTTATTTGAA+AGG - chr8_2:54808665-54808684 None:intergenic 40.0%
! GGAAAAGGCAATGCTTTAAG+AGG - chr8_2:54808709-54808728 None:intergenic 40.0%
GTGTTTAGGAGTAATTTCGG+TGG - chr8_2:54808782-54808801 None:intergenic 40.0%
! TTTTTGTGTTAACCTTCCGG+TGG + chr8_2:54809124-54809143 Msa1255740:intron 40.0%
! TTTTGTGTTAACCTTCCGGT+GGG + chr8_2:54809125-54809144 Msa1255740:intron 40.0%
TTCCCACAAAAAATCGAACC+TGG + chr8_2:54809176-54809195 Msa1255740:intron 40.0%
TGAACGCTAGTGCCTATAAT+TGG + chr8_2:54809353-54809372 Msa1255740:intron 40.0%
CTCAAATCCAGCATCTTCAA+TGG - chr8_2:54809478-54809497 None:intergenic 40.0%
CATTGAAGATGCTGGATTTG+AGG + chr8_2:54809476-54809495 Msa1255740:CDS 40.0%
GTTGGAACTATCATCTTCCA+TGG - chr8_2:54809508-54809527 None:intergenic 40.0%
TTGAAGAGCTGATTGCACAT+TGG - chr8_2:54809592-54809611 None:intergenic 40.0%
TTCTGCTTCTTCAGTTGCTA+AGG - chr8_2:54809646-54809665 None:intergenic 40.0%
TTCAATGAAGGTTCTTGGAC+CGG - chr8_2:54809916-54809935 None:intergenic 40.0%
CTCATTGAATCTTCAGGATC+AGG + chr8_2:54809936-54809955 Msa1255740:CDS 40.0%
!! GCCTATAAAGCTTTGAGCAA+AGG + chr8_2:54810224-54810243 Msa1255740:CDS 40.0%
GAGCAAAGGTTATGCAAACA+TGG + chr8_2:54810238-54810257 Msa1255740:CDS 40.0%
! TGGCAAGTATTTGGAAGTGT+TGG + chr8_2:54810397-54810416 Msa1255740:CDS 40.0%
GTTAGTAAGGTTGCTGTATC+AGG - chr8_2:54810470-54810489 None:intergenic 40.0%
TGATGTGATCAAAGTTGTGC+CGG + chr8_2:54810556-54810575 Msa1255740:CDS 40.0%
AAAGCCTGTTGCTAAGATGA+AGG + chr8_2:54810655-54810674 Msa1255740:CDS 40.0%
AAGCCTGTTGCTAAGATGAA+GGG + chr8_2:54810656-54810675 Msa1255740:CDS 40.0%
TGCTAAGATGAAGGGTGATA+TGG + chr8_2:54810664-54810683 Msa1255740:CDS 40.0%
ATGAAGGGTGATATGGTGAT+TGG + chr8_2:54810671-54810690 Msa1255740:CDS 40.0%
CATGTTAAGGTAACAAGGGT+TGG + chr8_2:54810722-54810741 Msa1255740:CDS 40.0%
! AATCTGTGAGAGTGCAGTTT+CGG - chr8_2:54810750-54810769 None:intergenic 40.0%
TACTAACTAGCTACCGTGAT+TGG + chr8_2:54810872-54810891 Msa1255740:intron 40.0%
ACACAATCACCTGCAAAAAC+AGG - chr8_2:54811070-54811089 None:intergenic 40.0%
! TGGATATCATGGTTTGTAGC+TGG + chr8_2:54811104-54811123 Msa1255740:CDS 40.0%
! ACTCAAGGTGTGTTGATCAA+AGG + chr8_2:54811284-54811303 Msa1255740:CDS 40.0%
! ATGGCAAGTTGAGAGAACAA+TGG - chr8_2:54811369-54811388 None:intergenic 40.0%
AAGACAGGAACTCTGACTAT+TGG + chr8_2:54811451-54811470 Msa1255740:CDS 40.0%
AGACAGGAACTCTGACTATT+GGG + chr8_2:54811452-54811471 Msa1255740:CDS 40.0%
! GTGTCTCTCGTTAGTCTATT+TGG + chr8_2:54811865-54811884 Msa1255740:intron 40.0%
ACTAGCAGAAGCTGAAAACA+TGG + chr8_2:54812173-54812192 Msa1255740:CDS 40.0%
! CATGGCTCAAACAGGAATTT+TGG + chr8_2:54812191-54812210 Msa1255740:CDS 40.0%
TCATTGGATGGGGAAATTGT+TGG + chr8_2:54812216-54812235 Msa1255740:CDS 40.0%
! TGGGGAAATTGTTGGAGTTT+TGG + chr8_2:54812224-54812243 Msa1255740:CDS 40.0%
ATGGTGACAGGTGATAATTG+GGG + chr8_2:54812321-54812340 Msa1255740:CDS 40.0%
! AGCTGGTATTGAAACTGTCA+TGG + chr8_2:54812368-54812387 Msa1255740:CDS 40.0%
TATTGAAACTGTCATGGCTG+AGG + chr8_2:54812374-54812393 Msa1255740:CDS 40.0%
AAAAGGAGGGAAACAATGAG+GGG - chr8_2:54812499-54812518 None:intergenic 40.0%
CAAAAAGGAGGGAAACAATG+AGG - chr8_2:54812501-54812520 None:intergenic 40.0%
! CTCATTGTTTCCCTCCTTTT+TGG + chr8_2:54812499-54812518 Msa1255740:intron 40.0%
TTAGTAACTGCCGTTAGTGT+AGG + chr8_2:54812535-54812554 Msa1255740:intron 40.0%
AGTCTCTAACGTCAGCTTAT+TGG + chr8_2:54812622-54812641 Msa1255740:intron 40.0%
GTCTCTAACGTCAGCTTATT+GGG + chr8_2:54812623-54812642 Msa1255740:intron 40.0%
! GCCACGTTACGTGATTTTAT+TGG + chr8_2:54812645-54812664 Msa1255740:intron 40.0%
CCCAATAAAATCACGTAACG+TGG - chr8_2:54812649-54812668 None:intergenic 40.0%
! CTGAATGATTAGTCCTAGAG+GGG - chr8_2:54812785-54812804 None:intergenic 40.0%
! CCTGAATGATTAGTCCTAGA+GGG - chr8_2:54812786-54812805 None:intergenic 40.0%
! TCCTGAATGATTAGTCCTAG+AGG - chr8_2:54812787-54812806 None:intergenic 40.0%
! AACTCGAATTCGGATTTTGC+TGG + chr8_2:54812808-54812827 Msa1255740:intron 40.0%
CAGAATTCTGGATACACTGT+AGG + chr8_2:54813074-54813093 Msa1255740:intron 40.0%
TTCTGGATACACTGTAGGAA+TGG + chr8_2:54813079-54813098 Msa1255740:CDS 40.0%
! AAAAGTATGCCAGCAGCAAT+AGG - chr8_2:54813320-54813339 None:intergenic 40.0%
GGTAGCCTAAATCTAGTAGA+AGG - chr8_2:54813344-54813363 None:intergenic 40.0%
ACCAACCAAGCTGAATAACT+TGG + chr8_2:54813445-54813464 Msa1255740:CDS 40.0%
TCCAAGTTATTCAGCTTGGT+TGG - chr8_2:54813449-54813468 None:intergenic 40.0%
GGTGCTTGGGAATGCATAAA+TGG + chr8_2:54807200-54807219 Msa1255740:CDS 45.0%
GCTTGGGAATGCATAAATGG+AGG + chr8_2:54807203-54807222 Msa1255740:CDS 45.0%
ATCGATGACGACGTTCCTTT+AGG - chr8_2:54807293-54807312 None:intergenic 45.0%
TAAAGGAACGTCGTCATCGA+TGG + chr8_2:54807292-54807311 Msa1255740:CDS 45.0%
TTTCTCAACAGATCCAGCAC+AGG - chr8_2:54807378-54807397 None:intergenic 45.0%
ACGTTTACCTGGTATTCGAG+AGG + chr8_2:54807406-54807425 Msa1255740:CDS 45.0%
AGTTAAGGAAGCTGAAGAGG+AGG + chr8_2:54807902-54807921 Msa1255740:intron 45.0%
GTTAAGGAAGCTGAAGAGGA+GGG + chr8_2:54807903-54807922 Msa1255740:intron 45.0%
TCTCAAAGTAGAAGAGGTGG+TGG - chr8_2:54808611-54808630 None:intergenic 45.0%
GGATCTCAAAGTAGAAGAGG+TGG - chr8_2:54808614-54808633 None:intergenic 45.0%
! TGATTTGGCATACGACGTTG+TGG - chr8_2:54808678-54808697 None:intergenic 45.0%
AGGAGTAATTTCGGTGGTGT+CGG - chr8_2:54808776-54808795 None:intergenic 45.0%
! ATTTGAGGGAATTCTGGAGG+TGG - chr8_2:54808863-54808882 None:intergenic 45.0%
GCAATTTGAGGGAATTCTGG+AGG - chr8_2:54808866-54808885 None:intergenic 45.0%
TTTGTGTTAACCTTCCGGTG+GGG + chr8_2:54809126-54809145 Msa1255740:intron 45.0%
GACTTTAATTGTCTCCCCAC+CGG - chr8_2:54809143-54809162 None:intergenic 45.0%
! TGGATTTGAGGCCAAATCCA+TGG + chr8_2:54809488-54809507 Msa1255740:CDS 45.0%
AAGAGCTGATTGCACATTGG+AGG - chr8_2:54809589-54809608 None:intergenic 45.0%
CAATCTCTTAGGACACTCCA+AGG + chr8_2:54809825-54809844 Msa1255740:CDS 45.0%
GTTCTTGGACCGGTCATATA+AGG - chr8_2:54809906-54809925 None:intergenic 45.0%
ACAAGCTATCGCGAAACTCA+TGG + chr8_2:54810436-54810455 Msa1255740:CDS 45.0%
GATGTGATCAAAGTTGTGCC+GGG + chr8_2:54810557-54810576 Msa1255740:CDS 45.0%
TCACCCTTCATCTTAGCAAC+AGG - chr8_2:54810662-54810681 None:intergenic 45.0%
AAGGGTGATATGGTGATTGG+TGG + chr8_2:54810674-54810693 Msa1255740:CDS 45.0%
GGTGGTACTGTGAATGAGAA+TGG + chr8_2:54810692-54810711 Msa1255740:CDS 45.0%
! ACTTGTTGAGTCTGCTCAGA+TGG + chr8_2:54810775-54810794 Msa1255740:CDS 45.0%
!! TGGTCAGCATATTTCTGGAC+TGG - chr8_2:54810809-54810828 None:intergenic 45.0%
TAACTAGCTACCGTGATTGG+TGG + chr8_2:54810875-54810894 Msa1255740:intron 45.0%
CGTCACAATTCCACCAATCA+CGG - chr8_2:54810888-54810907 None:intergenic 45.0%
! ATAGCTTGTCCTTGTGCTCT+AGG + chr8_2:54811215-54811234 Msa1255740:CDS 45.0%
! CAAGGTGTGTTGATCAAAGG+TGG + chr8_2:54811287-54811306 Msa1255740:CDS 45.0%
TGTGCGCACTTTCTAATGCT+TGG - chr8_2:54811313-54811332 None:intergenic 45.0%
! AGCATTAGAAAGTGCGCACA+AGG + chr8_2:54811313-54811332 Msa1255740:CDS 45.0%
TATTGCAGGACATGGAGTGA+AGG + chr8_2:54812062-54812081 Msa1255740:CDS 45.0%
GCTGAAAACATGGCTCAAAC+AGG + chr8_2:54812183-54812202 Msa1255740:CDS 45.0%
ACAATGAGGGGAAACCCTAA+AGG - chr8_2:54812487-54812506 None:intergenic 45.0%
!! CCCTCTAGGACTAATCATTC+AGG + chr8_2:54812783-54812802 Msa1255740:intron 45.0%
! CATACTTGGTGGCAGAATTC+TGG + chr8_2:54813062-54813081 Msa1255740:intron 45.0%
GGATACACTGTAGGAATGGT+AGG + chr8_2:54813083-54813102 Msa1255740:CDS 45.0%
ACTGTAGGAATGGTAGGAGA+TGG + chr8_2:54813089-54813108 Msa1255740:CDS 45.0%
AGTAGCAGCTGATGTTGGAA+TGG + chr8_2:54813133-54813152 Msa1255740:CDS 45.0%
GCTGATGTTGGAATGGCAAT+TGG + chr8_2:54813140-54813159 Msa1255740:CDS 45.0%
TATGCCAGCAGCAATAGGAA+TGG - chr8_2:54813315-54813334 None:intergenic 45.0%
CTAGATTTAGGCTACCACCT+TGG + chr8_2:54813348-54813367 Msa1255740:CDS 45.0%
!! ACATTATAATAAAAATATAA+AGG - chr8_2:54807551-54807570 None:intergenic 5.0%
!!! TAATTTTTTATTTTTTTTTG+AGG + chr8_2:54807758-54807777 Msa1255740:intron 5.0%
!!! TTAATATAGTTTTTTTTTTT+AGG - chr8_2:54808163-54808182 None:intergenic 5.0%
!!! TTTTGAAATTTTAATTTATT+CGG - chr8_2:54811838-54811857 None:intergenic 5.0%
!!! TAAAAAAAATTAAATTTTGT+AGG + chr8_2:54812982-54813001 Msa1255740:intron 5.0%
!!! AAAAAAAATTAAATTTTGTA+GGG + chr8_2:54812983-54813002 Msa1255740:intron 5.0%
GGTTACACTTGCAGTGCTGT+GGG + chr8_2:54807225-54807244 Msa1255740:CDS 50.0%
GATAGTGTGACTCAGGTGAC+AGG - chr8_2:54807253-54807272 None:intergenic 50.0%
ATCGACGGATAGTGTGACTC+AGG - chr8_2:54807260-54807279 None:intergenic 50.0%
ACGTCGTCATCGATGGAAGA+AGG + chr8_2:54807299-54807318 Msa1255740:CDS 50.0%
ACAACAGCCTCTCGAATACC+AGG - chr8_2:54807416-54807435 None:intergenic 50.0%
! AGCATTGCCTTTTCCCACCA+AGG + chr8_2:54808714-54808733 Msa1255740:intron 50.0%
TCTGCATCCTTGGTGGGAAA+AGG - chr8_2:54808724-54808743 None:intergenic 50.0%
! TTTTCCCACCAAGGATGCAG+AGG + chr8_2:54808723-54808742 Msa1255740:intron 50.0%
! AGTAATTTCGGTGGTGTCGG+GGG - chr8_2:54808773-54808792 None:intergenic 50.0%
! GAGTAATTTCGGTGGTGTCG+GGG - chr8_2:54808774-54808793 None:intergenic 50.0%
GGAGTAATTTCGGTGGTGTC+GGG - chr8_2:54808775-54808794 None:intergenic 50.0%
TTAATTGTCTCCCCACCGGA+AGG - chr8_2:54809139-54809158 None:intergenic 50.0%
! ACAGGAAGAGAGCATACGTG+AGG + chr8_2:54809452-54809471 Msa1255740:intron 50.0%
TCAGCTCTTCAATCCCTTCG+TGG + chr8_2:54809600-54809619 Msa1255740:CDS 50.0%
CAGCTCTTCAATCCCTTCGT+GGG + chr8_2:54809601-54809620 Msa1255740:CDS 50.0%
AGCTCTTCAATCCCTTCGTG+GGG + chr8_2:54809602-54809621 Msa1255740:CDS 50.0%
! TGCTATTTGCACCCCACGAA+GGG - chr8_2:54809616-54809635 None:intergenic 50.0%
TGGGGTGCAAATAGCACAAG+TGG + chr8_2:54809620-54809639 Msa1255740:CDS 50.0%
!!! TCTGATGCTACTTTTGCGCC+CGG - chr8_2:54810578-54810597 None:intergenic 50.0%
GGCGCAAAAGTAGCATCAGA+TGG + chr8_2:54810578-54810597 Msa1255740:CDS 50.0%
! ACCTTGAGTTGCACCAACTC+CGG - chr8_2:54811273-54811292 None:intergenic 50.0%
TCTGACTATTGGGAAGCCAG+TGG + chr8_2:54811462-54811481 Msa1255740:CDS 50.0%
GTCCTCGAGTGTGACATGTT+TGG + chr8_2:54811802-54811821 Msa1255740:intron 50.0%
GACCAAACATGTCACACTCG+AGG - chr8_2:54811807-54811826 None:intergenic 50.0%
ACATCAGCTGCTACTAGTGC+TGG - chr8_2:54813128-54813147 None:intergenic 50.0%
GCACTAGTAGCAGCTGATGT+TGG + chr8_2:54813128-54813147 Msa1255740:CDS 50.0%
GTTGGAATGGCAATTGGTGC+TGG + chr8_2:54813146-54813165 Msa1255740:CDS 50.0%
CTAGCCATTCCTATTGCTGC+TGG + chr8_2:54813308-54813327 Msa1255740:CDS 50.0%
ATTGCAGCTCCAGCAATCCA+AGG - chr8_2:54813368-54813387 None:intergenic 50.0%
TTGGATTGCTGGAGCTGCAA+TGG + chr8_2:54813367-54813386 Msa1255740:CDS 50.0%
GGGTTACACTTGCAGTGCTG+TGG + chr8_2:54807224-54807243 Msa1255740:CDS 55.0%
GATGGAAGAAGGCTCAGAGC+TGG + chr8_2:54807310-54807329 Msa1255740:CDS 55.0%
ATGACATGTGCTGCCTGTGC+TGG + chr8_2:54807362-54807381 Msa1255740:CDS 55.0%
CTCACCTCTGCATCCTTGGT+GGG - chr8_2:54808730-54808749 None:intergenic 55.0%
CGTGAGGCCATTGAAGATGC+TGG + chr8_2:54809468-54809487 Msa1255740:CDS 55.0%
!! GTGCTATTTGCACCCCACGA+AGG - chr8_2:54809617-54809636 None:intergenic 55.0%
AACCATGACCGCTGTAGGAG+TGG - chr8_2:54811246-54811265 None:intergenic 55.0%
ACTCCTACAGCGGTCATGGT+TGG + chr8_2:54811245-54811264 Msa1255740:CDS 55.0%
GTACCAACCATGACCGCTGT+AGG - chr8_2:54811251-54811270 None:intergenic 55.0%
! ACAGCGGTCATGGTTGGTAC+CGG + chr8_2:54811251-54811270 Msa1255740:CDS 55.0%
! GTCATGGTTGGTACCGGAGT+TGG + chr8_2:54811257-54811276 Msa1255740:CDS 55.0%
!! ACCGGAGTTGGTGCAACTCA+AGG + chr8_2:54811269-54811288 Msa1255740:CDS 55.0%
!! CGAACTTGTTGCTGCAGCAG+AGG + chr8_2:54811531-54811550 Msa1255740:CDS 55.0%
TTGTTGCTGCAGCAGAGGCA+AGG + chr8_2:54811536-54811555 Msa1255740:CDS 55.0%
AGGCTACCACCTTGGATTGC+TGG + chr8_2:54813356-54813375 Msa1255740:CDS 55.0%
CCTCACCTCTGCATCCTTGG+TGG - chr8_2:54808731-54808750 None:intergenic 60.0%
CCACCAAGGATGCAGAGGTG+AGG + chr8_2:54808728-54808747 Msa1255740:intron 60.0%
CCTCCTCACCTCTGCATCCT+TGG - chr8_2:54808734-54808753 None:intergenic 60.0%
CCAAGGATGCAGAGGTGAGG+AGG + chr8_2:54808731-54808750 Msa1255740:intron 60.0%
TGCAGAGGTGAGGAGGAGCA+AGG + chr8_2:54808738-54808757 Msa1255740:intron 60.0%
GTGGCTAGGCCTAGAGCACA+AGG - chr8_2:54811227-54811246 None:intergenic 60.0%
AGGCCTAGCCACTCCTACAG+CGG + chr8_2:54811235-54811254 Msa1255740:CDS 60.0%
TGACCGCTGTAGGAGTGGCT+AGG - chr8_2:54811241-54811260 None:intergenic 60.0%
AGCCACTCCTACAGCGGTCA+TGG + chr8_2:54811241-54811260 Msa1255740:CDS 60.0%
GCAGCTCCAGCAATCCAAGG+TGG - chr8_2:54813365-54813384 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 54807179 54813540 54807179 ID=Msa1255740;Name=Msa1255740
chr8_2 mRNA 54807179 54813540 54807179 ID=Msa1255740-mRNA-1;Parent=Msa1255740;Name=Msa1255740-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.4|0.16|1|1|1|6|47|989
chr8_2 exon 54807179 54807460 54807179 ID=Msa1255740-mRNA-1:exon:16973;Parent=Msa1255740-mRNA-1
chr8_2 exon 54809456 54810853 54809456 ID=Msa1255740-mRNA-1:exon:16974;Parent=Msa1255740-mRNA-1
chr8_2 exon 54811080 54811334 54811080 ID=Msa1255740-mRNA-1:exon:16975;Parent=Msa1255740-mRNA-1
chr8_2 exon 54811430 54811564 54811430 ID=Msa1255740-mRNA-1:exon:16976;Parent=Msa1255740-mRNA-1
chr8_2 exon 54811955 54812437 54811955 ID=Msa1255740-mRNA-1:exon:16977;Parent=Msa1255740-mRNA-1
chr8_2 exon 54813077 54813540 54813077 ID=Msa1255740-mRNA-1:exon:16978;Parent=Msa1255740-mRNA-1
chr8_2 CDS 54807179 54807460 54807179 ID=Msa1255740-mRNA-1:cds;Parent=Msa1255740-mRNA-1
chr8_2 CDS 54809456 54810853 54809456 ID=Msa1255740-mRNA-1:cds;Parent=Msa1255740-mRNA-1
chr8_2 CDS 54811080 54811334 54811080 ID=Msa1255740-mRNA-1:cds;Parent=Msa1255740-mRNA-1
chr8_2 CDS 54811430 54811564 54811430 ID=Msa1255740-mRNA-1:cds;Parent=Msa1255740-mRNA-1
chr8_2 CDS 54811955 54812437 54811955 ID=Msa1255740-mRNA-1:cds;Parent=Msa1255740-mRNA-1
chr8_2 CDS 54813077 54813493 54813077 ID=Msa1255740-mRNA-1:cds;Parent=Msa1255740-mRNA-1
chr8_2 three_prime_UTR 54813494 54813540 54813494 ID=Msa1255740-mRNA-1:three_prime_utr;Parent=Msa1255740-mRNA-1
Gene Sequence

>Msa1255740

ATGGGTCGTAAAAAGTTTGATGGTGCTTGGGAATGCATAAATGGAGGGTTACACTTGCAGTGCTGTGGGAACCTGTCACCTGAGTCACACTATCCGTCGATGACGACATATCCTAAAGGAACGTCGTCATCGATGGAAGAAGGCTCAGAGCTGGCCATAACTGTTGTTTTCTGCGTTATGGGAATGACATGTGCTGCCTGTGCTGGATCTGTTGAGAAAGCCATCAAACGTTTACCTGGTATTCGAGAGGCTGTTGTTGATGTCTTGAATGATAAAGCTCAGGAAGAGAGCATACGTGAGGCCATTGAAGATGCTGGATTTGAGGCCAAATCCATGGAAGATGATAGTTCCAACAACACTTTGTTTCAAATATGTAGAGTACACATAGGTGGCATGACTTGTACTTCTTGCTCCTCCAATGTGCAATCAGCTCTTCAATCCCTTCGTGGGGTGCAAATAGCACAAGTGGCCTTAGCAACTGAAGAAGCAGAAATTCGTTACGATCCAAAGATTATAAGCTACACTCAACTAATGGAAACTATATCAAACACAGGTTTTAACCCTATATTAATAAGCAAAGGGGAACACATAAGCAAAATTGAACTTAAAATTGATGGCATAAAAAATGAACAATCAATGTATATCATTGAACAATCTCTTAGGACACTCCAAGGTGTTGAAACCATAGAAACATATTTAGACATTAATAAAATTGTGTTAACTTATAAACCTTATATGACCGGTCCAAGAACCTTCATTGAACTCATTGAATCTTCAGGATCAGGGTGTTTTAGAGCCACAATATTTCCAAATGATGATGGAAGAAAAGCACATAAACAAGAAGAAATTAATAGATACTTTAAATTGTTAATTTGGAGTTTGATTTTTACTATTCCTGTTTTTTTAACATCTATGGTTCTTATGTATATACCTGGAGTTAAAGATGTTTTAGAGGTCAAAATTGTCAATATGTTGAATATTGGATTGCTCATAAGGTGGGAATTTTCGACACCAGTACAATTTGTCATAGGAAGAAGATTTTATGTTGGAGCCTATAAAGCTTTGAGCAAAGGTTATGCAAACATGGATTTGTTGATAGCATTGGGAACAAATGCAGCTTATTTCTATTCTGTTTATGTTGTTGGAAGAGCTACATTTTCTTCCCATTTTGAAGGAAGTGATTTTTTCGAAACAAGTTCTATGCTTATTTCTTTTATTCTACTTGGCAAGTATTTGGAAGTGTTGGCTAAAGGGAAAACATCACAAGCTATCGCGAAACTCATGGATTTAACACCTGATACAGCAACCTTACTAACTCTTGATGATGATAAGGGAAATGTTATAGGTGAAAGAGAAATTGATAGCAGGTTGATACAGAAGAATGATGTGATCAAAGTTGTGCCGGGCGCAAAAGTAGCATCAGATGGTTTTGTTGTTTGGGGACAAAGTCATGTAAATGAGAGTATGATAACTGGTGAAGCAAAGCCTGTTGCTAAGATGAAGGGTGATATGGTGATTGGTGGTACTGTGAATGAGAATGGTGTTTTGCATGTTAAGGTAACAAGGGTTGGATCCGAAACTGCACTCTCACAGATTGTTAGACTTGTTGAGTCTGCTCAGATGGCTAAAGCTCCAGTCCAGAAATATGCTGACCAGATTTCTAAATACTTTGTTCCTATAGTGATTGTGTTATCTCTTACAACATGGATATCATGGTTTGTAGCTGGAAAATTGCATTCATTCCCAAAATCATGGATACCATCTTCCATGAATAGTTTTGAGCTTGCACTTCAGTTTGGAATTTCAGTCATGGTCATAGCTTGTCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCGGTCATGGTTGGTACCGGAGTTGGTGCAACTCAAGGTGTGTTGATCAAAGGTGGCCAAGCATTAGAAAGTGCGCACAAGGTGAATTGCATTGTGTTTGATAAGACAGGAACTCTGACTATTGGGAAGCCAGTGGTTGTAACTACAAAACTCTTCAAGAATATGCCAGTTAAAGATTTCTACGAACTTGTTGCTGCAGCAGAGGCAAGGCTTCTTGTGAATAGTGAACATCCAATAGCAAAGTCCATTGTTGATCATGCCAAAAATATCACACAAGATGAACAAAATCATTCATCATGGCCAGAAGCAAAAGAATTTGTATCTATTGCAGGACATGGAGTGAAGGCAATTGTTCAAAACAAGGAAATAATGGTTGGAAATAAAAAACTGATGTTAGATCATAACATAGCTATTTCAGTGGAAGCTGAAGAAATACTAGCAGAAGCTGAAAACATGGCTCAAACAGGAATTTTGGTATCATTGGATGGGGAAATTGTTGGAGTTTTGGCTGTGTCTGATCCATTGAAACCTGATGCAAAAGAAGTTATTTCTATTCTTAAATCAATGAAAATAAAGAGCATAATGGTGACAGGTGATAATTGGGGAACTGCAAATTCTATTGCTAGACAAGCTGGTATTGAAACTGTCATGGCTGAGGCTCAACCTGAGACTAAAGCTACTAAAGTAAAGGAATTGCAGAATTCTGGATACACTGTAGGAATGGTAGGAGATGGTATCAATGATTCACCAGCACTAGTAGCAGCTGATGTTGGAATGGCAATTGGTGCTGGCACAGACATTGCTATTGAAGCAGCTGACATTGTTCTCATGAAGAGTAACTTAGAGGATATAATAATTGCCATTGACCTTGCAAAGAAAACTTTCTCACGTATACGTCTAAATTACATTTGGGCTTTAGGTTATAATATTCTAGCCATTCCTATTGCTGCTGGCATACTTTTTCCTTCTACTAGATTTAGGCTACCACCTTGGATTGCTGGAGCTGCAATGGCTGCTTCTTCTATCAGTGTTGTTTGCTCTTCTCTCTTGTTGAAGAAATACAAGAAACCAACCAAGCTGAATAACTTGGAGATTAATGGTATTCAGATTGAATAA
Protein sequence

>Msa1255740

MGRKKFDGAWECINGGLHLQCCGNLSPESHYPSMTTYPKGTSSSMEEGSELAITVVFCVMGMTCAACAGSVEKAIKRLPGIREAVVDVLNDKAQEESIREAIEDAGFEAKSMEDDSSNNTLFQICRVHIGGMTCTSCSSNVQSALQSLRGVQIAQVALATEEAEIRYDPKIISYTQLMETISNTGFNPILISKGEHISKIELKIDGIKNEQSMYIIEQSLRTLQGVETIETYLDINKIVLTYKPYMTGPRTFIELIESSGSGCFRATIFPNDDGRKAHKQEEINRYFKLLIWSLIFTIPVFLTSMVLMYIPGVKDVLEVKIVNMLNIGLLIRWEFSTPVQFVIGRRFYVGAYKALSKGYANMDLLIALGTNAAYFYSVYVVGRATFSSHFEGSDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPDTATLLTLDDDKGNVIGEREIDSRLIQKNDVIKVVPGAKVASDGFVVWGQSHVNESMITGEAKPVAKMKGDMVIGGTVNENGVLHVKVTRVGSETALSQIVRLVESAQMAKAPVQKYADQISKYFVPIVIVLSLTTWISWFVAGKLHSFPKSWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVTTKLFKNMPVKDFYELVAAAEARLLVNSEHPIAKSIVDHAKNITQDEQNHSSWPEAKEFVSIAGHGVKAIVQNKEIMVGNKKLMLDHNIAISVEAEEILAEAENMAQTGILVSLDGEIVGVLAVSDPLKPDAKEVISILKSMKIKSIMVTGDNWGTANSIARQAGIETVMAEAQPETKATKVKELQNSGYTVGMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLAKKTFSRIRLNYIWALGYNILAIPIAAGILFPSTRFRLPPWIAGAAMAASSISVVCSSLLLKKYKKPTKLNNLEINGIQIE*