AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0234150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0234150 MtrunA17_Chr2g0292181 89.113 248 25 1 53 298 115 362 1.25e-158 446
Msa0234150 MtrunA17_Chr2g0292181 67.832 143 40 3 1 139 1 141 1.98e-56 186
Msa0234150 MtrunA17_Chr2g0292241 75.600 250 57 2 53 298 106 355 3.59e-133 381
Msa0234150 MtrunA17_Chr2g0292241 54.478 134 55 3 10 139 1 132 3.72e-38 138
Msa0234150 MtrunA17_Chr2g0292211 75.000 248 59 2 53 298 117 363 6.02e-131 376
Msa0234150 MtrunA17_Chr2g0292211 48.889 135 63 3 9 139 11 143 1.51e-30 117
Msa0234150 MtrunA17_Chr2g0292251 79.452 219 45 0 70 288 124 342 1.25e-124 360
Msa0234150 MtrunA17_Chr2g0292251 47.788 113 53 3 31 139 21 131 1.24e-22 96.3
Msa0234150 MtrunA17_Chr2g0292151 55.367 354 93 5 10 298 1 354 2.12e-121 352
Msa0234150 MtrunA17_Chr2g0292111 55.211 355 93 5 10 298 1 355 1.28e-118 345
Msa0234150 MtrunA17_Chr2g0291751 64.231 260 84 3 48 298 96 355 5.00e-111 325
Msa0234150 MtrunA17_Chr2g0291751 63.014 73 27 0 10 82 1 73 1.73e-27 109
Msa0234150 MtrunA17_Chr2g0292271 59.919 247 97 1 53 297 106 352 9.86e-98 291
Msa0234150 MtrunA17_Chr2g0292091 57.480 254 99 3 44 290 87 338 4.97e-97 289
Msa0234150 MtrunA17_Chr2g0292091 39.130 115 62 3 10 123 1 108 4.47e-15 74.7
Msa0234150 MtrunA17_Chr2g0292261 65.596 218 70 2 82 297 137 351 2.40e-94 283
Msa0234150 MtrunA17_Chr2g0292261 56.716 134 52 3 10 139 1 132 9.65e-42 147
Msa0234150 MtrunA17_Chr2g0292101 58.039 255 96 4 45 298 101 345 3.33e-92 277
Msa0234150 MtrunA17_Chr2g0292101 39.167 120 64 4 10 127 1 113 8.87e-16 76.6
Msa0234150 MtrunA17_Chr2g0292291 63.134 217 77 2 82 297 138 352 1.86e-91 275
Msa0234150 MtrunA17_Chr2g0292291 51.538 130 57 3 12 137 4 131 6.63e-35 129
Msa0234150 MtrunA17_Chr2g0292281 59.722 216 75 3 82 297 33 236 7.84e-84 252
Msa0234150 MtrunA17_Chr1g0175561 56.796 206 89 0 70 275 121 326 2.51e-78 241
Msa0234150 MtrunA17_Chr1g0175561 33.607 122 74 3 30 146 16 135 5.38e-14 71.2
Msa0234150 MtrunA17_Chr7g0258811 52.889 225 104 1 53 275 147 371 8.19e-78 241
Msa0234150 MtrunA17_Chr2g0299691 49.528 212 100 2 68 276 152 359 5.34e-63 202
Msa0234150 MtrunA17_Chr2g0299691 36.792 106 57 4 37 137 55 155 7.60e-12 65.1
Msa0234150 MtrunA17_Chr4g0070951 48.804 209 105 1 70 276 122 330 4.60e-61 197
Msa0234150 MtrunA17_Chr8g0372601 44.493 227 123 2 52 276 106 331 3.29e-59 192
Msa0234150 MtrunA17_Chr8g0372601 32.075 106 66 3 38 139 30 133 1.98e-11 63.9
Msa0234150 MtrunA17_Chr5g0404721 45.133 226 121 2 52 275 106 330 3.64e-59 192
Msa0234150 MtrunA17_Chr5g0404721 36.792 106 61 3 38 139 30 133 2.13e-13 69.7
Msa0234150 MtrunA17_Chr5g0402581 46.860 207 106 3 70 275 123 326 1.30e-56 185
Msa0234150 MtrunA17_Chr5g0402571 44.928 207 110 3 70 275 123 326 7.76e-54 178
Msa0234150 MtrunA17_Chr5g0402571 32.773 119 74 3 36 150 25 141 7.77e-11 62.0
Msa0234150 MtrunA17_Chr5g0438021 44.934 227 112 4 53 275 108 325 2.97e-53 176
Msa0234150 MtrunA17_Chr3g0106921 45.652 230 111 5 51 275 100 320 6.55e-53 175
Msa0234150 MtrunA17_Chr4g0013171 46.377 207 101 3 70 275 124 321 1.76e-52 174
Msa0234150 MtrunA17_Chr3g0114451 43.111 225 117 3 53 275 103 318 2.75e-52 174
Msa0234150 MtrunA17_Chr3g0129061 50.000 188 83 3 86 271 140 318 3.06e-52 174
Msa0234150 MtrunA17_Chr3g0129061 33.043 115 70 3 10 123 4 112 1.29e-12 67.4
Msa0234150 MtrunA17_Chr2g0320031 45.631 206 104 2 70 275 122 319 3.46e-52 173
Msa0234150 MtrunA17_Chr5g0432441 47.619 210 97 4 70 275 126 326 1.09e-51 172
Msa0234150 MtrunA17_Chr4g0013191 43.668 229 116 5 51 275 121 340 5.68e-51 171
Msa0234150 MtrunA17_Chr1g0148021 41.748 206 118 1 70 275 125 328 8.92e-51 170
Msa0234150 MtrunA17_Chr7g0244461 41.262 206 112 2 70 275 116 312 1.13e-50 169
Msa0234150 MtrunA17_Chr3g0129051 47.059 204 97 3 70 271 124 318 1.36e-50 169
Msa0234150 MtrunA17_Chr2g0320071 42.718 206 109 2 70 275 121 317 2.13e-50 169
Msa0234150 MtrunA17_Chr2g0320071 32.812 128 80 3 16 139 3 128 3.35e-13 68.9
Msa0234150 MtrunA17_Chr4g0013181 45.411 207 103 3 70 275 156 353 2.49e-50 169
Msa0234150 MtrunA17_Chr4g0013201 44.660 206 105 2 70 275 142 338 4.31e-50 169
Msa0234150 MtrunA17_Chr2g0320061 43.689 206 108 2 70 275 121 318 6.30e-50 167
Msa0234150 MtrunA17_Chr3g0129041 50.000 192 85 3 86 275 140 322 8.19e-50 167
Msa0234150 MtrunA17_Chr3g0129041 32.174 115 71 3 10 123 4 112 5.63e-12 65.5
Msa0234150 MtrunA17_Chr2g0279041 42.654 211 112 5 70 275 119 325 1.79e-49 167
Msa0234150 MtrunA17_Chr4g0072091 43.564 202 112 1 70 271 120 319 4.89e-49 166
Msa0234150 MtrunA17_Chr2g0320051 34.259 324 141 6 16 275 3 318 6.19e-49 165
Msa0234150 MtrunA17_Chr2g0320101 43.478 207 106 4 70 275 121 317 7.96e-49 165
Msa0234150 MtrunA17_Chr2g0320101 33.594 128 79 3 16 139 3 128 3.45e-13 68.9
Msa0234150 MtrunA17_Chr5g0421411 40.171 234 133 6 49 276 54 286 1.14e-48 163
Msa0234150 MtrunA17_Chr1g0155611 41.150 226 131 1 52 275 122 347 1.17e-48 165
Msa0234150 MtrunA17_Chr2g0322861 41.827 208 117 3 70 275 181 386 1.47e-48 166
Msa0234150 MtrunA17_Chr2g0279061 42.180 211 113 5 70 275 60 266 2.24e-48 162
Msa0234150 MtrunA17_Chr5g0401431 40.976 205 119 1 70 274 126 328 2.71e-48 164
Msa0234150 MtrunA17_Chr3g0114461 45.789 190 95 2 86 275 11 192 2.86e-48 159
Msa0234150 MtrunA17_Chr7g0225221 43.204 206 111 2 70 275 121 320 3.95e-48 163
Msa0234150 MtrunA17_Chr4g0046131 39.300 257 149 5 21 272 89 343 3.04e-47 161
Msa0234150 MtrunA17_Chr5g0432341 41.518 224 121 3 54 275 106 321 3.12e-47 160
Msa0234150 MtrunA17_Chr4g0013821 38.362 232 136 4 52 281 104 330 4.11e-47 161
Msa0234150 MtrunA17_Chr1g0213061 33.022 321 140 7 22 276 11 322 5.11e-47 160
Msa0234150 MtrunA17_Chr4g0076211 40.708 226 125 5 53 275 114 333 6.70e-47 160
Msa0234150 MtrunA17_Chr2g0320091 42.512 207 109 3 70 275 121 318 1.98e-46 159
Msa0234150 MtrunA17_Chr2g0320091 31.250 128 82 3 16 139 3 128 7.82e-11 62.0
Msa0234150 MtrunA17_Chr5g0432351 41.071 224 122 3 54 275 106 321 6.91e-46 157
Msa0234150 MtrunA17_Chr3g0106901 42.632 190 100 2 86 275 143 323 7.14e-46 157
Msa0234150 MtrunA17_Chr3g0106901 39.394 99 57 2 25 122 18 114 6.28e-12 65.1
Msa0234150 MtrunA17_Chr4g0038171 41.228 228 122 4 53 275 101 321 8.50e-46 157
Msa0234150 MtrunA17_Chr4g0068621 37.168 226 135 4 53 275 115 336 1.70e-45 157
Msa0234150 MtrunA17_Chr3g0128061 40.865 208 120 2 70 276 122 327 1.84e-45 156
Msa0234150 MtrunA17_Chr4g0043391 41.228 228 122 4 53 275 104 324 3.07e-45 155
Msa0234150 MtrunA17_Chr4g0043391 42.000 100 55 2 24 122 13 110 2.41e-13 69.3
Msa0234150 MtrunA17_Chr6g0467121 43.162 234 115 6 53 284 157 374 3.65e-45 157
Msa0234150 MtrunA17_Chr5g0400331 42.381 210 117 2 70 275 122 331 4.85e-45 155
Msa0234150 MtrunA17_Chr4g0063671 40.284 211 118 4 70 275 113 320 7.41e-45 154
Msa0234150 MtrunA17_Chr6g0467161 40.175 229 116 6 54 277 126 338 8.11e-45 155
Msa0234150 MtrunA17_Chr4g0013721 38.326 227 133 4 53 277 177 398 8.62e-45 157
Msa0234150 MtrunA17_Chr4g0024121 40.580 207 120 2 70 275 122 326 1.10e-44 154
Msa0234150 MtrunA17_Chr4g0053871 42.927 205 110 3 70 274 126 323 1.62e-44 154
Msa0234150 MtrunA17_Chr5g0432331 46.524 187 92 2 89 275 174 352 2.41e-44 154
Msa0234150 MtrunA17_Chr7g0268501 38.222 225 132 4 53 275 101 320 2.71e-44 153
Msa0234150 MtrunA17_Chr7g0268521 38.222 225 132 4 53 275 101 320 2.71e-44 153
Msa0234150 MtrunA17_Chr2g0296621 40.175 229 127 6 51 276 121 342 3.89e-44 153
Msa0234150 MtrunA17_Chr4g0038161 41.667 228 120 4 53 275 101 320 1.25e-43 151
Msa0234150 MtrunA17_Chr3g0107881 40.000 225 126 2 53 275 107 324 2.54e-43 150
Msa0234150 MtrunA17_Chr3g0107881 44.000 75 34 1 23 89 12 86 1.73e-11 63.9
Msa0234150 MtrunA17_Chr4g0038151 40.789 228 122 4 53 275 102 321 3.29e-43 150
Msa0234150 MtrunA17_Chr7g0244451 38.222 225 128 3 53 275 101 316 2.03e-42 148
Msa0234150 MtrunA17_Chr7g0224371 36.123 227 129 4 56 276 107 323 3.23e-41 145
Msa0234150 MtrunA17_Chr5g0405991 37.611 226 130 7 53 275 99 316 4.07e-41 144
Msa0234150 MtrunA17_Chr1g0164891 40.838 191 106 4 88 275 206 392 4.59e-41 146
Msa0234150 MtrunA17_Chr7g0254201 36.681 229 135 5 51 277 94 314 1.40e-40 143
Msa0234150 MtrunA17_Chr4g0004591 30.851 282 147 4 38 274 77 355 1.04e-39 142
Msa0234150 MtrunA17_Chr1g0204011 38.835 206 121 3 70 275 122 322 6.12e-39 139
Msa0234150 MtrunA17_Chr6g0467251 35.294 255 148 8 21 271 83 324 8.69e-39 139
Msa0234150 MtrunA17_Chr2g0278671 39.336 211 119 4 70 275 117 323 9.56e-38 136
Msa0234150 MtrunA17_Chr2g0329641 35.981 214 122 5 70 275 129 335 2.29e-37 135
Msa0234150 MtrunA17_Chr8g0371381 35.922 206 125 3 70 275 121 319 4.71e-37 134
Msa0234150 MtrunA17_Chr1g0197411 37.313 201 119 3 78 275 134 330 6.69e-37 134
Msa0234150 MtrunA17_Chr5g0432401 34.875 281 151 8 20 274 11 285 1.05e-35 129
Msa0234150 MtrunA17_Chr6g0451571 36.842 209 123 4 68 275 134 334 2.83e-35 130
Msa0234150 MtrunA17_Chr1g0157051 36.585 205 124 3 70 274 119 317 1.58e-34 127
Msa0234150 MtrunA17_Chr1g0194151 37.629 194 109 4 88 275 146 333 3.54e-34 127
Msa0234150 MtrunA17_Chr8g0364291 36.019 211 124 4 68 275 122 324 4.71e-34 126
Msa0234150 MtrunA17_Chr4g0075241 34.043 235 141 6 44 275 104 327 7.62e-34 125
Msa0234150 MtrunA17_Chr5g0413051 39.037 187 106 5 94 275 194 377 1.20e-33 126
Msa0234150 MtrunA17_Chr1g0194271 36.869 198 112 3 88 275 146 340 1.58e-33 125
Msa0234150 MtrunA17_Chr7g0254231 34.348 230 134 6 51 276 96 312 2.03e-33 124
Msa0234150 MtrunA17_Chr6g0460711 31.325 249 154 7 35 275 75 314 3.23e-32 121
Msa0234150 MtrunA17_Chr3g0136751 37.019 208 127 2 70 275 117 322 3.71e-32 121
Msa0234150 MtrunA17_Chr1g0188431 35.437 206 121 5 70 275 134 327 6.08e-32 120
Msa0234150 MtrunA17_Chr1g0181511 35.238 210 126 4 70 276 122 324 8.77e-30 115
Msa0234150 MtrunA17_Chr2g0311251 30.380 237 133 4 70 276 107 341 2.98e-29 114
Msa0234150 MtrunA17_Chr6g0477071 30.364 247 154 6 35 275 108 342 5.57e-29 113
Msa0234150 MtrunA17_Chr1g0181431 33.810 210 129 3 70 276 122 324 1.25e-28 112
Msa0234150 MtrunA17_Chr1g0181481 33.810 210 129 3 70 276 122 324 1.97e-28 111
Msa0234150 MtrunA17_Chr2g0316791 30.472 233 130 5 70 272 173 403 4.99e-28 111
Msa0234150 MtrunA17_Chr4g0074851 34.848 198 119 3 86 280 143 333 1.26e-27 109
Msa0234150 MtrunA17_Chr2g0316481 30.043 233 131 5 70 272 173 403 1.77e-27 110
Msa0234150 MtrunA17_Chr2g0316831 30.043 233 131 5 70 272 209 439 2.64e-27 110
Msa0234150 MtrunA17_Chr2g0316191 29.787 235 130 5 70 272 173 404 3.69e-27 109
Msa0234150 MtrunA17_Chr1g0181501 34.197 193 116 4 87 276 6 190 5.54e-27 104
Msa0234150 MtrunA17_Chr2g0311241 28.800 250 142 5 61 276 184 431 1.18e-26 108
Msa0234150 MtrunA17_Chr3g0104101 40.559 143 80 5 138 276 9 150 1.02e-24 97.1
Msa0234150 MtrunA17_Chr5g0432321 43.548 124 62 2 95 218 17 132 2.23e-24 95.5
Msa0234150 MtrunA17_Chr2g0316771 29.348 184 96 4 124 276 7 187 1.39e-20 87.0
Msa0234150 MtrunA17_Chr5g0432361 40.909 88 51 1 187 274 22 108 1.28e-15 71.6
Msa0234150 MtrunA17_Chr4g0013811 45.833 72 39 0 86 157 7 78 1.24e-14 67.8
Msa0234150 MtrunA17_Chr7g0268491 40.594 101 52 4 177 275 3 97 2.28e-13 65.1
Msa0234150 MtrunA17_Chr3g0114491 32.710 107 66 3 37 139 17 121 1.34e-11 61.2
Msa0234150 MtrunA17_Chr2g0316811 28.777 139 83 2 70 193 147 284 2.89e-11 63.2
Msa0234150 MtrunA17_Chr3g0124821 29.592 196 110 7 70 259 183 356 6.51e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0234150 AT2G38380.1 57.339 218 85 3 82 298 139 349 2.79e-79 244
Msa0234150 AT5G06730.1 53.670 218 95 1 61 278 126 337 3.95e-77 239
Msa0234150 AT5G06730.1 35.833 120 71 4 23 138 18 135 4.65e-15 75.1
Msa0234150 AT2G38390.1 51.613 248 106 4 52 298 115 349 4.19e-77 239
Msa0234150 AT2G38390.1 37.615 109 62 3 34 138 27 133 1.41e-13 70.5
Msa0234150 AT5G06720.1 51.293 232 97 2 44 275 118 333 5.16e-75 233
Msa0234150 AT5G06720.1 35.000 120 72 4 23 138 17 134 1.50e-14 73.6
Msa0234150 AT4G08770.1 50.000 246 119 3 53 294 101 346 2.85e-73 229
Msa0234150 AT4G08770.1 37.168 113 65 3 34 142 20 130 1.36e-14 73.6
Msa0234150 AT3G49120.1 50.410 244 117 3 53 292 109 352 8.03e-73 228
Msa0234150 AT3G49120.1 33.858 127 75 4 23 142 14 138 3.18e-14 72.4
Msa0234150 AT3G49110.1 51.230 244 115 3 53 292 110 353 1.60e-72 227
Msa0234150 AT3G49110.1 33.858 127 75 4 23 142 15 139 1.56e-14 73.6
Msa0234150 AT3G32980.1 48.837 258 123 4 44 292 94 351 1.79e-72 227
Msa0234150 AT3G32980.1 35.043 117 70 3 34 146 27 141 2.59e-14 72.8
Msa0234150 AT4G08780.1 48.536 239 119 3 53 287 101 339 4.37e-70 221
Msa0234150 AT4G08780.1 35.965 114 67 3 34 143 20 131 4.74e-15 75.1
Msa0234150 AT5G19880.1 52.577 194 91 1 83 275 136 329 3.22e-66 210
Msa0234150 AT5G19890.1 48.558 208 102 3 70 275 123 327 4.84e-60 194
Msa0234150 AT4G36430.1 47.826 207 107 1 70 276 126 331 1.56e-57 188
Msa0234150 AT2G18150.1 46.602 206 109 1 70 275 132 336 1.68e-57 188
Msa0234150 AT2G18140.1 46.602 206 109 1 70 275 131 335 1.46e-56 186
Msa0234150 AT5G66390.1 43.363 226 125 2 52 275 109 333 1.05e-55 183
Msa0234150 AT5G05340.1 44.934 227 112 4 53 275 107 324 7.19e-55 181
Msa0234150 AT5G05340.1 35.185 108 64 4 35 138 27 132 2.28e-11 63.9
Msa0234150 AT3G50990.1 42.222 225 127 2 53 275 118 341 2.14e-53 177
Msa0234150 AT4G30170.1 43.689 206 114 1 70 275 122 325 5.72e-53 176
Msa0234150 AT1G14550.1 43.333 240 121 5 44 275 89 321 7.82e-53 176
Msa0234150 AT2G18980.1 40.157 254 150 1 22 275 72 323 3.50e-52 174
Msa0234150 AT1G49570.1 41.593 226 125 4 53 273 125 348 3.41e-51 172
Msa0234150 AT4G37530.1 44.175 206 113 1 70 275 126 329 3.78e-51 171
Msa0234150 AT1G71695.1 45.192 208 105 4 72 278 143 342 1.36e-49 168
Msa0234150 AT1G44970.1 40.444 225 132 1 53 275 122 346 1.51e-49 168
Msa0234150 AT5G58390.1 42.411 224 115 5 53 271 98 312 1.05e-48 165
Msa0234150 AT5G15180.1 39.823 226 128 4 56 275 106 329 2.12e-48 164
Msa0234150 AT4G37520.1 42.233 206 117 1 70 275 126 329 2.79e-48 164
Msa0234150 AT5G67400.1 42.233 206 117 1 70 275 126 329 1.11e-47 162
Msa0234150 AT1G68850.1 39.834 241 132 8 48 276 97 336 1.49e-47 162
Msa0234150 AT2G22420.1 39.815 216 125 3 70 285 119 329 1.60e-47 162
Msa0234150 AT1G14540.1 43.689 206 109 2 70 275 117 315 4.71e-47 160
Msa0234150 AT1G14540.1 38.843 121 68 3 23 139 6 124 4.65e-14 71.6
Msa0234150 AT4G37520.2 43.523 193 107 1 83 275 136 326 6.89e-47 160
Msa0234150 AT5G14130.1 40.865 208 116 3 70 275 128 330 2.84e-46 159
Msa0234150 AT5G14130.2 40.865 208 116 3 70 275 169 371 6.64e-46 159
Msa0234150 AT2G41480.1 40.758 211 117 4 70 275 121 328 1.17e-45 157
Msa0234150 AT1G05260.1 39.713 209 122 3 70 276 120 326 1.30e-45 157
Msa0234150 AT4G16270.1 38.053 226 133 5 53 275 127 348 2.54e-45 157
Msa0234150 AT4G16270.1 36.111 108 63 3 35 138 47 152 1.59e-12 67.4
Msa0234150 AT5G58400.1 41.150 226 119 5 51 271 105 321 5.04e-45 155
Msa0234150 AT3G49960.1 39.806 206 122 1 70 275 126 329 1.09e-44 155
Msa0234150 AT3G01190.1 39.320 206 121 3 70 275 120 321 1.23e-44 154
Msa0234150 AT4G11290.1 31.928 332 154 8 10 275 1 326 1.64e-44 154
Msa0234150 AT5G39580.1 39.381 226 130 5 53 275 98 319 8.81e-44 152
Msa0234150 AT2G35380.2 41.905 210 118 3 70 275 38 247 1.86e-43 149
Msa0234150 AT1G05240.1 36.475 244 137 5 44 275 88 325 2.48e-43 151
Msa0234150 AT1G05250.1 36.475 244 137 5 44 275 88 325 2.48e-43 151
Msa0234150 AT5G64120.1 40.580 207 117 4 70 275 127 328 4.15e-43 150
Msa0234150 AT5G24070.1 38.208 212 122 4 70 276 129 336 9.90e-43 150
Msa0234150 AT2G35380.1 41.905 210 118 3 70 275 126 335 1.47e-42 149
Msa0234150 AT4G25980.1 40.284 211 118 3 70 275 119 326 1.47e-42 149
Msa0234150 AT4G37530.2 48.052 154 80 0 70 223 126 279 4.79e-42 146
Msa0234150 AT3G21770.1 37.799 209 126 3 70 276 123 329 6.66e-42 147
Msa0234150 AT5G17820.1 39.130 207 116 5 70 275 116 313 7.77e-42 147
Msa0234150 AT2G43480.1 39.252 214 115 5 70 275 129 335 1.45e-41 147
Msa0234150 AT5G17820.2 39.130 207 116 5 70 275 169 366 6.08e-41 145
Msa0234150 AT3G03670.1 39.216 204 122 1 72 275 120 321 7.46e-41 144
Msa0234150 AT5G51890.1 38.158 228 129 6 53 275 102 322 1.72e-40 144
Msa0234150 AT2G34060.1 41.117 197 112 3 78 272 149 343 1.23e-38 139
Msa0234150 AT5G64110.1 36.681 229 136 4 52 275 106 330 2.41e-38 138
Msa0234150 AT5G64100.1 34.498 229 139 5 52 275 109 331 1.43e-36 133
Msa0234150 AT5G40150.1 37.073 205 121 3 72 275 131 328 3.57e-36 132
Msa0234150 AT1G77100.1 40.191 209 115 4 70 275 118 319 8.96e-36 131
Msa0234150 AT1G24110.1 37.629 194 117 3 83 275 132 322 3.88e-35 129
Msa0234150 AT4G33420.1 36.564 227 130 6 51 275 111 325 1.75e-34 128
Msa0234150 AT4G33420.2 36.564 227 130 6 51 275 158 372 3.40e-34 128
Msa0234150 AT5G42180.1 35.610 205 126 3 70 274 118 316 8.07e-34 126
Msa0234150 AT4G17690.1 35.961 203 122 3 78 279 131 326 1.42e-33 125
Msa0234150 AT1G30870.1 37.879 198 110 6 86 278 159 348 8.36e-33 124
Msa0234150 AT4G26010.1 36.207 232 123 9 51 275 96 309 1.30e-32 122
Msa0234150 AT4G26010.2 36.638 232 122 9 51 275 124 337 1.70e-32 123
Msa0234150 AT4G31760.1 34.450 209 131 3 70 275 121 326 2.57e-32 122
Msa0234150 AT5G47000.1 34.158 202 126 3 79 279 139 334 2.97e-32 122
Msa0234150 AT2G39040.1 39.691 194 109 3 87 275 160 350 5.15e-32 122
Msa0234150 AT3G28200.1 32.850 207 130 3 70 275 118 316 9.16e-32 120
Msa0234150 AT4G33870.1 30.833 240 125 4 70 272 163 398 1.64e-31 121
Msa0234150 AT5G22410.1 31.579 228 144 6 51 271 99 321 3.98e-31 119
Msa0234150 AT2G24800.1 34.286 210 131 4 70 275 123 329 1.67e-30 117
Msa0234150 AT1G34510.1 33.333 240 143 6 39 275 84 309 9.19e-29 112
Msa0234150 AT4G21960.1 35.233 193 115 3 86 275 142 327 6.01e-28 110
Msa0234150 AT2G37130.2 34.762 210 126 4 70 275 94 296 3.18e-27 108
Msa0234150 AT2G37130.1 34.762 210 126 4 70 275 125 327 5.55e-27 108
Msa0234150 AT3G17070.2 34.649 228 127 8 56 275 63 276 1.24e-26 105
Msa0234150 AT3G17070.1 34.483 232 130 8 52 275 122 339 1.62e-26 107
Msa0234150 AT4G08390.3 28.972 214 114 9 54 259 178 361 9.02e-12 65.5
Msa0234150 AT4G08390.2 28.972 214 114 9 54 259 179 362 9.84e-12 65.5
Msa0234150 AT4G08390.5 28.972 214 114 9 54 259 179 362 9.84e-12 65.5
Msa0234150 AT4G08390.1 28.972 214 114 9 54 259 179 362 9.84e-12 65.5
Msa0234150 AT1G77490.2 28.302 212 118 7 54 259 158 341 3.18e-11 63.9
Msa0234150 AT1G77490.1 28.302 212 118 7 54 259 158 341 3.82e-11 63.5

Find 85 sgRNAs with CRISPR-Local

Find 423 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAATTGGCTAGGTTATT+TGG 0.131049 2_2:-6775906 None:intergenic
AGTCATAACATCTTTATTTA+TGG 0.145264 2_2:-6776288 None:intergenic
CTCCAATCTTCAGGGTAAAA+AGG 0.165515 2_2:+6775965 Msa0234150:CDS
TGAAGCCGCAATGATTAAAA+TGG 0.207698 2_2:+6776091 Msa0234150:CDS
CCTTATGACTTCACGAATAA+TGG 0.227694 2_2:-6770137 None:intergenic
TTGTATTTGAAGTATTTCTT+TGG 0.243189 2_2:+6776368 Msa0234150:three_prime_UTR
TAGCTCAATTTAAGTACATT+AGG 0.246177 2_2:+6776235 Msa0234150:exon
TGCTGCGTAGTGGTTGTTCT+TGG 0.292253 2_2:+6770043 Msa0234150:CDS
CCTAAGGGAACCTTCCAATT+AGG 0.299457 2_2:-6775514 None:intergenic
GAACTACTACTCCAATCTTC+AGG 0.316728 2_2:+6775956 Msa0234150:CDS
TTGCAAATTGTAATAATATA+TGG 0.324737 2_2:-6769888 None:intergenic
TTATTTGGTGGTCCGCCATT+AGG 0.325085 2_2:-6775891 None:intergenic
TATTTGGTGGTCCGCCATTA+GGG 0.328859 2_2:-6775890 None:intergenic
TGTATTTGAAGTATTTCTTT+GGG 0.329363 2_2:+6776369 Msa0234150:three_prime_UTR
GACAGGCAGATGGTCCTAAT+TGG 0.340600 2_2:+6775500 Msa0234150:intron
TAGTTCTTGTCAAATTTATC+AGG 0.341189 2_2:-6775939 None:intergenic
AGGAGTCGTTGGGTCAAAAT+TGG 0.352540 2_2:-6775919 None:intergenic
ATGATTAAAATGGGTAATAT+TGG 0.359326 2_2:+6776101 Msa0234150:CDS
AGCTCAATTTAAGTACATTA+GGG 0.369762 2_2:+6776236 Msa0234150:exon
CGAATAATGGAATGAACCTT+TGG 0.376652 2_2:-6770124 None:intergenic
TTTGTTGTTATGAGTATGAT+TGG 0.402767 2_2:-6769987 None:intergenic
TCCGGCTCCATTCAATTCGT+TGG 0.412887 2_2:+6775585 Msa0234150:CDS
GCTCGCTAATCAAAATCTTC+CGG 0.413502 2_2:+6775567 Msa0234150:CDS
CCATTATTCGTGAAGTCATA+AGG 0.419736 2_2:+6770137 Msa0234150:CDS
AGTTGATCCAACGAATTGAA+TGG 0.422071 2_2:-6775592 None:intergenic
AACTTGATCCTTCCTTCTAC+AGG 0.427261 2_2:+6770092 Msa0234150:CDS
TGGACAAGTGTCCCTGTAGA+AGG 0.431111 2_2:-6770104 None:intergenic
AACAACAAAATGAACTCCTT+TGG 0.435964 2_2:+6770001 Msa0234150:CDS
AAATAAGTTGTGTTAAGAGT+TGG 0.446017 2_2:-6775846 None:intergenic
TAAACCATCCCTTCTTCCTA+AGG 0.452261 2_2:-6775530 None:intergenic
TGTCTAGTCTCTATAAATAA+CGG 0.460348 2_2:+6769952 Msa0234150:five_prime_UTR
CTAGCTTGAAATGTAGTGAT+TGG 0.460476 2_2:+6776262 Msa0234150:three_prime_UTR
TTACGCAAAATATGCCCTAA+TGG 0.460673 2_2:+6775876 Msa0234150:CDS
AATTCAAAATCAGTTGAACT+TGG 0.466976 2_2:+6776173 Msa0234150:CDS
TGCGTAGTGGTTGTTCTTGG+AGG 0.471719 2_2:+6770046 Msa0234150:CDS
GAAGCCGCAATGATTAAAAT+GGG 0.473046 2_2:+6776092 Msa0234150:CDS
GAACTTGTTGACAATGCTAA+TGG 0.473631 2_2:-6776036 None:intergenic
TTCCACAGATTCATCGGGTA+TGG 0.479176 2_2:+6776211 Msa0234150:CDS
GGAAGGTTCCCTTAGGAAGA+AGG 0.481031 2_2:+6775521 Msa0234150:CDS
TCAAATTTATCAGGAGTCGT+TGG 0.486420 2_2:-6775930 None:intergenic
TTGATTAGCGAGCGATTGGT+TGG 0.493017 2_2:-6775557 None:intergenic
ACTCAAATTGAATGGCAACT+TGG 0.493452 2_2:-6769843 None:intergenic
GGTAATATTGGTGTGCTGAC+CGG 0.495092 2_2:+6776113 Msa0234150:CDS
GTTGTGTTAAGAGTTGGATC+AGG 0.495573 2_2:-6775840 None:intergenic
AACTACTACTCCAATCTTCA+GGG 0.496833 2_2:+6775957 Msa0234150:CDS
CAAATTTATCAGGAGTCGTT+GGG 0.501770 2_2:-6775929 None:intergenic
AATGTAGGTGCACATACATT+CGG 0.502427 2_2:+6775759 Msa0234150:intron
ACTGATCTAGTTGCTCTCTC+AGG 0.506595 2_2:+6775649 Msa0234150:CDS
CCTCAATACTTTACAAGTCA+TGG 0.508545 2_2:+6769911 Msa0234150:five_prime_UTR
CCTAATTGGAAGGTTCCCTT+AGG 0.512222 2_2:+6775514 Msa0234150:CDS
ATTAGCGAGCGATTGGTTGG+CGG 0.513279 2_2:-6775554 None:intergenic
CCATGACTTGTAAAGTATTG+AGG 0.515557 2_2:-6769911 None:intergenic
AAATCTGCATTTGCTGCTCA+AGG 0.516203 2_2:+6775616 Msa0234150:CDS
TGTGGCTTCCACAGATTCAT+CGG 0.516272 2_2:+6776205 Msa0234150:CDS
TTATACAACTTCAGCAGTAC+AGG 0.516560 2_2:+6775813 Msa0234150:CDS
TTGTTGTTATGAGTATGATT+GGG 0.523132 2_2:-6769986 None:intergenic
GTAATATTGGTGTGCTGACC+GGG 0.523801 2_2:+6776114 Msa0234150:CDS
GCGTAGTGGTTGTTCTTGGA+GGG 0.539622 2_2:+6770047 Msa0234150:CDS
AAGTTGTGCATCTGAGGAGA+AGG 0.543665 2_2:-6770074 None:intergenic
AAATTGGCTAGGTTATTTGG+TGG 0.548775 2_2:-6775903 None:intergenic
GTGGCTTCCACAGATTCATC+GGG 0.558019 2_2:+6776206 Msa0234150:CDS
ACATGTGTCACATAGTTACT+AGG 0.559379 2_2:+6776324 Msa0234150:three_prime_UTR
TCCAACGAATTGAATGGAGC+CGG 0.561618 2_2:-6775586 None:intergenic
CAGATGTTGAGAAAAGCTCT+TGG 0.566213 2_2:-6776004 None:intergenic
AGGATCAAGTTGTGCATCTG+AGG 0.567220 2_2:-6770080 None:intergenic
TAGTTACTAGGTGCTTTGTG+AGG 0.577274 2_2:+6776336 Msa0234150:three_prime_UTR
GAAGGTTCCCTTAGGAAGAA+GGG 0.585149 2_2:+6775522 Msa0234150:CDS
AGTTACTAGGTGCTTTGTGA+GGG 0.587364 2_2:+6776337 Msa0234150:three_prime_UTR
AAACCATCCCTTCTTCCTAA+GGG 0.593389 2_2:-6775529 None:intergenic
CTACAGGGACACTTGTCCAA+AGG 0.594538 2_2:+6770108 Msa0234150:CDS
TCGTTGGGTCAAAATTGGCT+AGG 0.595086 2_2:-6775914 None:intergenic
TGAACTTGGTCTAGTGAATG+TGG 0.599379 2_2:+6776187 Msa0234150:CDS
GGCAGATGGTCCTAATTGGA+AGG 0.605173 2_2:+6775504 Msa0234150:intron
AACCATACCCGATGAATCTG+TGG 0.607568 2_2:-6776213 None:intergenic
CAAGTGTCCCTGTAGAAGGA+AGG 0.607579 2_2:-6770100 None:intergenic
GTTCCCTTAGGAAGAAGGGA+TGG 0.614528 2_2:+6775526 Msa0234150:CDS
AGCTGTCAACGTGAGACCAA+AGG 0.632651 2_2:-6770017 None:intergenic
ACTTGATCCTTCCTTCTACA+GGG 0.634221 2_2:+6770093 Msa0234150:CDS
TGTATGTATTGACAGGCAGA+TGG 0.639188 2_2:+6775490 Msa0234150:intron
CGCAAAATATGCCCTAATGG+CGG 0.644342 2_2:+6775879 Msa0234150:CDS
AGTTGTGCATCTGAGGAGAA+GGG 0.646152 2_2:-6770073 None:intergenic
TAAATAAAGATGTTATGACT+AGG 0.656221 2_2:+6776291 Msa0234150:three_prime_UTR
CAACTAGATCAGTAGTACTG+AGG 0.672059 2_2:-6775639 None:intergenic
GACAGCTCTATGCTGCGTAG+TGG 0.672635 2_2:+6770033 Msa0234150:CDS
ACGAGACTAGCAAGCATACG+AGG 0.681087 2_2:-6770178 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAAATTAATTTATA+AGG - chr2_2:6771296-6771315 None:intergenic 0.0%
!!! TTGTAGAATTTTTTTAAATA+CGG - chr2_2:6770707-6770726 None:intergenic 10.0%
!!! CTTTTTAAAAAAATATCAAA+GGG - chr2_2:6771320-6771339 None:intergenic 10.0%
!! AAGTTAATTTATAATTTGAA+GGG - chr2_2:6771591-6771610 None:intergenic 10.0%
!! AAAGTTAATTTATAATTTGA+AGG - chr2_2:6771592-6771611 None:intergenic 10.0%
!!! AATCAATTCTTATTTTTTAT+GGG + chr2_2:6772390-6772409 Msa0234150:intron 10.0%
!! ATATCATACTAATAAAAAAA+AGG + chr2_2:6772809-6772828 Msa0234150:intron 10.0%
!! TATCATACTAATAAAAAAAA+GGG + chr2_2:6772810-6772829 Msa0234150:intron 10.0%
!!! ATACTTGTTTATTTTTTTTA+GGG - chr2_2:6773408-6773427 None:intergenic 10.0%
!!! AATACTTGTTTATTTTTTTT+AGG - chr2_2:6773409-6773428 None:intergenic 10.0%
!!! AATGAGTATTTTTTTTTTTT+TGG + chr2_2:6773701-6773720 Msa0234150:intron 10.0%
!!! TAAAAGAAAGAATTTTTTTT+CGG - chr2_2:6773971-6773990 None:intergenic 10.0%
!!! TTTATTTTATTAACAACATT+TGG - chr2_2:6774211-6774230 None:intergenic 10.0%
!! GTTGTTAATAAAATAAAAAA+TGG + chr2_2:6774214-6774233 Msa0234150:intron 10.0%
!!! TTCTAATAACAATTTATTTT+AGG + chr2_2:6774959-6774978 Msa0234150:intron 10.0%
!!! TCTAATAACAATTTATTTTA+GGG + chr2_2:6774960-6774979 Msa0234150:intron 10.0%
!! TTGCAAATTGTAATAATATA+TGG - chr2_2:6769891-6769910 None:intergenic 15.0%
!!! TCATAGTTTTTTTTTTTGAA+AGG + chr2_2:6770490-6770509 Msa0234150:intron 15.0%
!! AATATTATTAATTAGCAGTT+AGG - chr2_2:6770682-6770701 None:intergenic 15.0%
!!! TTTTAAACTATATTCACAAA+AGG + chr2_2:6770745-6770764 Msa0234150:intron 15.0%
!! GAAAACAAAAAATAAGTTAA+GGG - chr2_2:6771138-6771157 None:intergenic 15.0%
!! TGAAAACAAAAAATAAGTTA+AGG - chr2_2:6771139-6771158 None:intergenic 15.0%
!! AAATTAATTTATAAGGTCTA+TGG - chr2_2:6771289-6771308 None:intergenic 15.0%
!!! CCTTTTTAAAAAAATATCAA+AGG - chr2_2:6771321-6771340 None:intergenic 15.0%
!!! CCTTTGATATTTTTTTAAAA+AGG + chr2_2:6771318-6771337 Msa0234150:intron 15.0%
!!! ATGAAGATAATTTTTTTTCT+GGG - chr2_2:6771475-6771494 None:intergenic 15.0%
!!! TAATTTGAGATTTTAGTTAA+TGG + chr2_2:6772357-6772376 Msa0234150:intron 15.0%
!!! CAATCAATTCTTATTTTTTA+TGG + chr2_2:6772389-6772408 Msa0234150:intron 15.0%
!! ATTAGACATTAAAAAATTAG+CGG + chr2_2:6772593-6772612 Msa0234150:intron 15.0%
!!! CTGAAAAAACTTAAATTTTT+CGG + chr2_2:6773126-6773145 Msa0234150:intron 15.0%
!! GAAAAAATCGTAAAAAAATT+CGG + chr2_2:6773150-6773169 Msa0234150:intron 15.0%
!! AAAAAATCGTAAAAAAATTC+GGG + chr2_2:6773151-6773170 Msa0234150:intron 15.0%
!! AAAACAAAAAAAAATAAGCA+AGG + chr2_2:6773205-6773224 Msa0234150:intron 15.0%
!! AAACAAAAAAAAATAAGCAA+GGG + chr2_2:6773206-6773225 Msa0234150:intron 15.0%
!! TAAAAATAAACAAAACATGA+GGG - chr2_2:6773937-6773956 None:intergenic 15.0%
!!! AAAAAATGGATATTTTTAGA+AGG + chr2_2:6774228-6774247 Msa0234150:intron 15.0%
!! TTTAGACTTAATTAATGATT+TGG + chr2_2:6774443-6774462 Msa0234150:intron 15.0%
!! TTATAACGTTAATAACTTAT+GGG - chr2_2:6774500-6774519 None:intergenic 15.0%
!! ATTATAACGTTAATAACTTA+TGG - chr2_2:6774501-6774520 None:intergenic 15.0%
!! AAGTTATTAACGTTATAATT+TGG + chr2_2:6774502-6774521 Msa0234150:intron 15.0%
!! ATTAGAACTTCAAAATAATA+TGG - chr2_2:6774946-6774965 None:intergenic 15.0%
!! TAAGAAAAAATTTCTACATT+TGG - chr2_2:6775024-6775043 None:intergenic 15.0%
!! TTTACCAGTAATAAAATAAA+GGG - chr2_2:6775164-6775183 None:intergenic 15.0%
!! ATTTACCAGTAATAAAATAA+AGG - chr2_2:6775165-6775184 None:intergenic 15.0%
!!! TGCAATTTTTTCTAATTAAA+AGG + chr2_2:6775674-6775693 Msa0234150:intron 15.0%
!!! GCAATTTTTTCTAATTAAAA+GGG + chr2_2:6775675-6775694 Msa0234150:intron 15.0%
!! GTATATAACAACAAATTATA+AGG + chr2_2:6775719-6775738 Msa0234150:intron 15.0%
!!! TTTTGTCTGAGTTTAAATTT+AGG - chr2_2:6770642-6770661 None:intergenic 20.0%
!! ATATTAATATTACGCATACA+CGG + chr2_2:6770985-6771004 Msa0234150:intron 20.0%
!! CATATGAAGTTGTAAAAATA+TGG + chr2_2:6771094-6771113 Msa0234150:intron 20.0%
!!! CTTATTTTTTGTTTTCACTT+TGG + chr2_2:6771142-6771161 Msa0234150:intron 20.0%
!! CATTTGATGTTAAAAACTAA+CGG - chr2_2:6771235-6771254 None:intergenic 20.0%
!!! TTTTTAACATCAAATGTCTA+AGG + chr2_2:6771239-6771258 Msa0234150:intron 20.0%
!!! GATGAAGATAATTTTTTTTC+TGG - chr2_2:6771476-6771495 None:intergenic 20.0%
!!! TTTTGTTTCTCTAAGATAAA+GGG - chr2_2:6771879-6771898 None:intergenic 20.0%
!! ATCATAATGAAAATAAGAGA+AGG + chr2_2:6771998-6772017 Msa0234150:intron 20.0%
!! AAAAATTACTTGACCAATAT+AGG + chr2_2:6772291-6772310 Msa0234150:intron 20.0%
!! AAAAAAAACTACACCTATAT+TGG - chr2_2:6772307-6772326 None:intergenic 20.0%
!! AAGAAAAAAAAATCAGATGT+TGG + chr2_2:6772512-6772531 Msa0234150:intron 20.0%
!! TGAAAACCAAAAATAAGTTA+AGG + chr2_2:6772689-6772708 Msa0234150:intron 20.0%
!! GAAAACCAAAAATAAGTTAA+GGG + chr2_2:6772690-6772709 Msa0234150:intron 20.0%
!! AACAAAAAAAAATAAGCAAG+GGG + chr2_2:6773207-6773226 Msa0234150:intron 20.0%
!! AAATGACATCTAATACTATT+TGG + chr2_2:6773498-6773517 Msa0234150:intron 20.0%
!!! TATTTTACTTTAGATCTGTT+TGG + chr2_2:6773549-6773568 Msa0234150:intron 20.0%
!! GTAAAAATAAACAAAACATG+AGG - chr2_2:6773938-6773957 None:intergenic 20.0%
!!! TAGAAAGTAAGATGATTTTT+TGG - chr2_2:6774086-6774105 None:intergenic 20.0%
!! CAAAAAGAAAAGAAAGTAAA+AGG - chr2_2:6774147-6774166 None:intergenic 20.0%
!!! ATTTTTCACTATACTCATTT+AGG - chr2_2:6774183-6774202 None:intergenic 20.0%
!!! CTTATTTGTTGGTTATATTT+TGG + chr2_2:6774473-6774492 Msa0234150:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr2_2:6774741-6774760 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr2_2:6774740-6774759 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr2_2:6774562-6774581 Msa0234150:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr2_2:6774681-6774700 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr2_2:6774681-6774700 Msa0234150:intron 20.0%
!! GAAACCAAAAATTAAGTTAA+GGG + chr2_2:6774712-6774731 Msa0234150:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr2_2:6774562-6774581 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr2_2:6774740-6774759 Msa0234150:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr2_2:6774741-6774760 Msa0234150:intron 20.0%
!! TAAGTTATTACGATACAATT+TGG - chr2_2:6774799-6774818 None:intergenic 20.0%
!! AATTGTATCGTAATAACTTA+TGG + chr2_2:6774799-6774818 Msa0234150:intron 20.0%
!! ATTGTATCGTAATAACTTAT+GGG + chr2_2:6774800-6774819 Msa0234150:intron 20.0%
!! TATAACCAACAAATAACTTA+AGG + chr2_2:6774830-6774849 Msa0234150:intron 20.0%
!! ATAACCAACAAATAACTTAA+GGG + chr2_2:6774831-6774850 Msa0234150:intron 20.0%
!! ATATTATCTATGATTGTAAC+AGG + chr2_2:6775205-6775224 Msa0234150:intron 20.0%
!! TATTATCTATGATTGTAACA+GGG + chr2_2:6775206-6775225 Msa0234150:intron 20.0%
!!! TAGTTGTTATTAATCATGTT+AGG - chr2_2:6775434-6775453 None:intergenic 20.0%
!! AATATATATGCTTCAAATGT+AGG + chr2_2:6775744-6775763 Msa0234150:intron 20.0%
!! ATGATTAAAATGGGTAATAT+TGG + chr2_2:6776101-6776120 Msa0234150:CDS 20.0%
!!! AGTCATAACATCTTTATTTA+TGG - chr2_2:6776291-6776310 None:intergenic 20.0%
!! TAAATAAAGATGTTATGACT+AGG + chr2_2:6776291-6776310 Msa0234150:three_prime_UTR 20.0%
!!! TTGTATTTGAAGTATTTCTT+TGG + chr2_2:6776368-6776387 Msa0234150:three_prime_UTR 20.0%
!!! TGTATTTGAAGTATTTCTTT+GGG + chr2_2:6776369-6776388 Msa0234150:three_prime_UTR 20.0%
!!! CAATTTTCTCTATCTTATTT+TGG + chr2_2:6776405-6776424 Msa0234150:three_prime_UTR 20.0%
!! TTTTGTGAACTCAAATTGAA+TGG - chr2_2:6769854-6769873 None:intergenic 25.0%
! TGTCTAGTCTCTATAAATAA+CGG + chr2_2:6769952-6769971 Msa0234150:five_prime_UTR 25.0%
!! TTGTTGTTATGAGTATGATT+GGG - chr2_2:6769989-6770008 None:intergenic 25.0%
!!! TTTGTTGTTATGAGTATGAT+TGG - chr2_2:6769990-6770009 None:intergenic 25.0%
!! GTTCATGTTAATATTTCTGT+TGG + chr2_2:6770445-6770464 Msa0234150:intron 25.0%
!! TTAGCTCAAATCAATCTTTT+AGG - chr2_2:6770599-6770618 None:intergenic 25.0%
!!! AAAAGATTGATTTGAGCTAA+AGG + chr2_2:6770599-6770618 Msa0234150:intron 25.0%
! TTAATTTATAAGGTCTATGG+TGG - chr2_2:6771286-6771305 None:intergenic 25.0%
!!! TTTTTTAAAAAGGAAAGCGT+TGG + chr2_2:6771328-6771347 Msa0234150:intron 25.0%
!!! TTGTTGTTGTTTGATTTTCT+AGG - chr2_2:6771568-6771587 None:intergenic 25.0%
! AAGAACAAGATTATCAAGAA+CGG + chr2_2:6771852-6771871 Msa0234150:intron 25.0%
!!! GTTTTGTTTCTCTAAGATAA+AGG - chr2_2:6771880-6771899 None:intergenic 25.0%
! CACATTAAAACTGTAAGATT+CGG + chr2_2:6771909-6771928 Msa0234150:intron 25.0%
! ATTTGAGGAGATAAATGTAA+TGG + chr2_2:6772078-6772097 Msa0234150:intron 25.0%
!! ATGGATTATCAATAGAACAA+AGG - chr2_2:6772248-6772267 None:intergenic 25.0%
!!! TTAAGTTGATGAAGATTAAG+AGG + chr2_2:6772455-6772474 Msa0234150:intron 25.0%
! AAAAAAAAATCAGATGTTGG+TGG + chr2_2:6772515-6772534 Msa0234150:intron 25.0%
!! AACTATAAAGTGTCTCAATT+TGG - chr2_2:6772657-6772676 None:intergenic 25.0%
!!! CTTATTTTTGGTTTTCACTT+TGG - chr2_2:6772686-6772705 None:intergenic 25.0%
!! TCAAGTGATTAACTTTTACA+GGG - chr2_2:6773305-6773324 None:intergenic 25.0%
!! TTCAAGTGATTAACTTTTAC+AGG - chr2_2:6772914-6772933 None:intergenic 25.0%
! TAAGGAAAAAAAATAAGCCA+GGG - chr2_2:6773013-6773032 None:intergenic 25.0%
! TTAAGGAAAAAAAATAAGCC+AGG - chr2_2:6773014-6773033 None:intergenic 25.0%
! AAAAAAATTCGGGAAAAAAC+TGG + chr2_2:6773161-6773180 Msa0234150:intron 25.0%
! AAAAAATTCGGGAAAAAACT+GGG + chr2_2:6773162-6773181 Msa0234150:intron 25.0%
!! ACTGGGAAAAAAAATTTTGA+AGG + chr2_2:6773179-6773198 Msa0234150:intron 25.0%
!! TCAAGTGATTAACTTTTACA+GGG + chr2_2:6773305-6773324 Msa0234150:intron 25.0%
!!! TTTTTTGGTAGAAATCGTTA+AGG + chr2_2:6773716-6773735 Msa0234150:intron 25.0%
!!! TTTTTGGTAGAAATCGTTAA+GGG + chr2_2:6773717-6773736 Msa0234150:intron 25.0%
!!! AAGATGATTTTTTGGTTGTT+TGG - chr2_2:6774078-6774097 None:intergenic 25.0%
! GTAAAAGGAAAGAATGTTTA+AGG - chr2_2:6774132-6774151 None:intergenic 25.0%
!!! GTCACTTTAGATTTTACTTT+TGG - chr2_2:6774316-6774335 None:intergenic 25.0%
! TTGGTCATTAACTTATTTGT+TGG + chr2_2:6774462-6774481 Msa0234150:intron 25.0%
! GTAACCAACAAATAACTTAA+AGG - chr2_2:6774772-6774791 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr2_2:6774680-6774699 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr2_2:6774593-6774612 Msa0234150:intron 25.0%
! CCTTAACTCTAATAACATAA+AGG - chr2_2:6774652-6774671 None:intergenic 25.0%
! CCTTTATGTTATTAGAGTTA+AGG + chr2_2:6774649-6774668 Msa0234150:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr2_2:6774680-6774699 Msa0234150:intron 25.0%
!!! CTTAATTTTTGGTTTCGTTT+TGG - chr2_2:6774708-6774727 None:intergenic 25.0%
! CGAAACCAAAAATTAAGTTA+AGG + chr2_2:6774711-6774730 Msa0234150:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr2_2:6774768-6774787 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr2_2:6774771-6774790 Msa0234150:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr2_2:6774772-6774791 Msa0234150:intron 25.0%
!!! ATGACCCTTTATTTTATTAC+TGG + chr2_2:6775157-6775176 Msa0234150:intron 25.0%
! TTATTAATCATGTTAGGATG+AGG - chr2_2:6775428-6775447 None:intergenic 25.0%
!! TAATACATGTATGTATTGAC+AGG + chr2_2:6775483-6775502 Msa0234150:intron 25.0%
! AAATAAGTTGTGTTAAGAGT+TGG - chr2_2:6775849-6775868 None:intergenic 25.0%
! TAGTTCTTGTCAAATTTATC+AGG - chr2_2:6775942-6775961 None:intergenic 25.0%
!!! ATTACCCATTTTAATCATTG+CGG - chr2_2:6776099-6776118 None:intergenic 25.0%
! AATTCAAAATCAGTTGAACT+TGG + chr2_2:6776173-6776192 Msa0234150:CDS 25.0%
! TAGCTCAATTTAAGTACATT+AGG + chr2_2:6776235-6776254 Msa0234150:exon 25.0%
! AGCTCAATTTAAGTACATTA+GGG + chr2_2:6776236-6776255 Msa0234150:exon 25.0%
!!! ATCTTATTTTGGACTTGTTT+TGG + chr2_2:6776416-6776435 Msa0234150:three_prime_UTR 25.0%
AACAACAAAATGAACTCCTT+TGG + chr2_2:6770001-6770020 Msa0234150:CDS 30.0%
AAGTAAGACACAAAAGACAT+GGG - chr2_2:6770263-6770282 None:intergenic 30.0%
TAAGTAAGACACAAAAGACA+TGG - chr2_2:6770264-6770283 None:intergenic 30.0%
ATTCACAAAAGGCAAATGTT+TGG + chr2_2:6770756-6770775 Msa0234150:intron 30.0%
CTACATTAACTGCATCAATT+TGG - chr2_2:6770909-6770928 None:intergenic 30.0%
TTGAGACACTCTATAGTTAT+GGG - chr2_2:6771169-6771188 None:intergenic 30.0%
ATTGAGACACTCTATAGTTA+TGG - chr2_2:6771170-6771189 None:intergenic 30.0%
! AACTATAGAGTGTCTCAATT+TGG + chr2_2:6771171-6771190 Msa0234150:intron 30.0%
!! TCTTCTGCCGTTTATTATTT+TGG + chr2_2:6771203-6771222 Msa0234150:intron 30.0%
GAGAGGACCAAAATAATAAA+CGG - chr2_2:6771213-6771232 None:intergenic 30.0%
CTAAGGTGAACCATATTTAA+AGG + chr2_2:6771256-6771275 Msa0234150:intron 30.0%
TATAGGTCTATTCTATCTTG+CGG + chr2_2:6771355-6771374 Msa0234150:intron 30.0%
CAAAATCAACAGAATTCAAC+TGG + chr2_2:6771676-6771695 Msa0234150:intron 30.0%
TTCAACAAGAAACAAGTAAC+AGG + chr2_2:6771701-6771720 Msa0234150:intron 30.0%
!! CAAAAGGTTGATTTTCTTGT+GGG - chr2_2:6771774-6771793 None:intergenic 30.0%
AGTGAGATTATCAAGAATGA+GGG + chr2_2:6771795-6771814 Msa0234150:intron 30.0%
AATCAGATTCACAACAAGAA+TGG + chr2_2:6771825-6771844 Msa0234150:intron 30.0%
TGATGTGAATGAATTGAATC+CGG - chr2_2:6771971-6771990 None:intergenic 30.0%
!! CATATGGGTTTTGTGATTTT+AGG + chr2_2:6772034-6772053 Msa0234150:intron 30.0%
!!! TTGTGTTTTATTTCAAGCTC+TGG + chr2_2:6772141-6772160 Msa0234150:intron 30.0%
! TGAGTCTTTGAAAATTCTGA+TGG - chr2_2:6772267-6772286 None:intergenic 30.0%
!!! GAGATTTTAGTTAATGGTGA+AGG + chr2_2:6772363-6772382 Msa0234150:intron 30.0%
TGGTTCACTACTATATACAA+TGG + chr2_2:6772535-6772554 Msa0234150:intron 30.0%
GAGATGACCAAAATAGTAAA+CGG + chr2_2:6772615-6772634 Msa0234150:intron 30.0%
TTGAGACACTTTATAGTTAG+AGG + chr2_2:6772659-6772678 Msa0234150:intron 30.0%
!! TTGGTCCCTTAACTTATTTT+TGG - chr2_2:6774581-6774600 None:intergenic 30.0%
TTTAGGCTTAATACATCGTT+TGG - chr2_2:6772717-6772736 None:intergenic 30.0%
AAGGAAAAAAAATAAGCCAG+GGG - chr2_2:6773012-6773031 None:intergenic 30.0%
! GTCAAGTGATTAACTTTTAC+AGG + chr2_2:6773304-6773323 Msa0234150:intron 30.0%
!!! TAAGATTTCCTTTTGCTGTT+TGG + chr2_2:6773428-6773447 Msa0234150:intron 30.0%
!!! CTTGGTTTTGAAAAAGTGAT+GGG + chr2_2:6773451-6773470 Msa0234150:intron 30.0%
!! GATGGGCAATTTAATTTGAA+CGG + chr2_2:6773468-6773487 Msa0234150:intron 30.0%
AAGATCTTCTTTCCATAGTT+TGG + chr2_2:6773790-6773809 Msa0234150:intron 30.0%
! AAGGAAAGAAAGTTTTTGCT+GGG + chr2_2:6773831-6773850 Msa0234150:intron 30.0%
!! ATACTCATTTAGGCTTTGTT+TGG - chr2_2:6774173-6774192 None:intergenic 30.0%
TGAGTGTAAAAGTCAAAAAG+TGG - chr2_2:6774383-6774402 None:intergenic 30.0%
TAAACCATATTTACCCCTTT+AGG - chr2_2:6774427-6774446 None:intergenic 30.0%
! TGGTCCTTTAAGTTATTTGT+TGG + chr2_2:6774522-6774541 Msa0234150:intron 30.0%
! GTTATTTGTTGGTTACATCT+TGG + chr2_2:6774533-6774552 Msa0234150:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr2_2:6774582-6774601 Msa0234150:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr2_2:6774582-6774601 None:intergenic 30.0%
! TGGTCCCTTAACTTAATTTT+TGG - chr2_2:6774719-6774738 None:intergenic 30.0%
TGATCCCTTAAGTTATTTGT+TGG - chr2_2:6774838-6774857 None:intergenic 30.0%
!! CTCTTAGAGAGTTGATATTT+GGG - chr2_2:6775292-6775311 None:intergenic 30.0%
!!! TTTCCACTGCTGTTTTAATT+CGG - chr2_2:6775331-6775350 None:intergenic 30.0%
TGCACAAATTTCCTCAATAT+TGG + chr2_2:6775397-6775416 Msa0234150:intron 30.0%
TCAAAATTGGCTAGGTTATT+TGG - chr2_2:6775909-6775928 None:intergenic 30.0%
ACTCAAATTGAATGGCAACT+TGG - chr2_2:6769846-6769865 None:intergenic 35.0%
!! CCATGACTTGTAAAGTATTG+AGG - chr2_2:6769914-6769933 None:intergenic 35.0%
CCTCAATACTTTACAAGTCA+TGG + chr2_2:6769911-6769930 Msa0234150:five_prime_UTR 35.0%
! CGAATAATGGAATGAACCTT+TGG - chr2_2:6770127-6770146 None:intergenic 35.0%
CCTTATGACTTCACGAATAA+TGG - chr2_2:6770140-6770159 None:intergenic 35.0%
CCATTATTCGTGAAGTCATA+AGG + chr2_2:6770137-6770156 Msa0234150:CDS 35.0%
!! CTTTCATGACTGTTTTGTTC+TGG + chr2_2:6770210-6770229 Msa0234150:CDS 35.0%
GACATGGGAATGAATGAATA+TGG - chr2_2:6770248-6770267 None:intergenic 35.0%
GATATTAACGTGTCAGTGTT+AGG + chr2_2:6770410-6770429 Msa0234150:intron 35.0%
CTGTTGGATATATACTCATG+TGG + chr2_2:6770461-6770480 Msa0234150:intron 35.0%
! TTTGGTGTACATTCCATGTT+AGG + chr2_2:6770774-6770793 Msa0234150:intron 35.0%
TTGGTGTACATTCCATGTTA+GGG + chr2_2:6770775-6770794 Msa0234150:intron 35.0%
! AATAAAAACCGTACGCGTTT+TGG + chr2_2:6770850-6770869 Msa0234150:intron 35.0%
GATGTTAAAAACTAACGGAG+AGG - chr2_2:6771230-6771249 None:intergenic 35.0%
AGGTGAACCATATTTAAAGG+TGG + chr2_2:6771259-6771278 Msa0234150:intron 35.0%
! GAGTATGAATGTGATGATGA+AGG - chr2_2:6771432-6771451 None:intergenic 35.0%
GGTTGTATGAAGATTGACTA+AGG - chr2_2:6771454-6771473 None:intergenic 35.0%
!! AACCTTTTTAAGCGAAACAG+TGG + chr2_2:6771734-6771753 Msa0234150:intron 35.0%
!!! TTTCTTGTGGGTTTTGTTCT+TGG - chr2_2:6771762-6771781 None:intergenic 35.0%
!! GCAAAAGGTTGATTTTCTTG+TGG - chr2_2:6771775-6771794 None:intergenic 35.0%
! CTTGATAATCTCACTGCAAA+AGG - chr2_2:6771790-6771809 None:intergenic 35.0%
CAGTGAGATTATCAAGAATG+AGG + chr2_2:6771794-6771813 Msa0234150:intron 35.0%
AGATTATCAAGAATGAGGGA+AGG + chr2_2:6771799-6771818 Msa0234150:intron 35.0%
AGATTCACAACAAGAATGGA+AGG + chr2_2:6771829-6771848 Msa0234150:intron 35.0%
GATTCAGTTCTTCTGTATCT+GGG + chr2_2:6771931-6771950 Msa0234150:intron 35.0%
GATGTGAATGAATTGAATCC+GGG - chr2_2:6771970-6771989 None:intergenic 35.0%
AGGAGAGTAAATGTTGCATA+TGG + chr2_2:6772018-6772037 Msa0234150:intron 35.0%
GGAGAGTAAATGTTGCATAT+GGG + chr2_2:6772019-6772038 Msa0234150:intron 35.0%
GCATCTGTGTTTCAAATTTG+AGG + chr2_2:6772063-6772082 Msa0234150:intron 35.0%
TGAGGAGATAAATGTAATGG+AGG + chr2_2:6772081-6772100 Msa0234150:intron 35.0%
AAGTCATGAAAAGAGCCATA+AGG - chr2_2:6772202-6772221 None:intergenic 35.0%
TGATGAAGATTAAGAGGAAG+AGG + chr2_2:6772461-6772480 Msa0234150:intron 35.0%
TTAAGAGGAAGAGGAATAAG+AGG + chr2_2:6772470-6772489 Msa0234150:intron 35.0%
TAAGAGGAAGAGGAATAAGA+GGG + chr2_2:6772471-6772490 Msa0234150:intron 35.0%
!! TCTTCTGCCGTTTACTATTT+TGG - chr2_2:6772625-6772644 None:intergenic 35.0%
AGTAAACGGCAGAAGATTTA+TGG + chr2_2:6772629-6772648 Msa0234150:intron 35.0%
GTAAACGGCAGAAGATTTAT+GGG + chr2_2:6772630-6772649 Msa0234150:intron 35.0%
TCAAATGGCCTATAATTGCA+GGG - chr2_2:6773365-6773384 None:intergenic 35.0%
TTCAAATGGCCTATAATTGC+AGG - chr2_2:6773364-6773383 None:intergenic 35.0%
! AACTTTTACAGGGACGAAAT+GGG - chr2_2:6773315-6773334 None:intergenic 35.0%
! TAACTTTTACAGGGACGAAA+TGG - chr2_2:6773314-6773333 None:intergenic 35.0%
!! ATTTTGGTAAATTGCTGACG+TGG - chr2_2:6772966-6772985 None:intergenic 35.0%
ACGTCAGCAATTTACCAAAA+TGG + chr2_2:6772965-6772984 Msa0234150:intron 35.0%
AGCAATTTACCAAAATGGCA+TGG + chr2_2:6772970-6772989 Msa0234150:intron 35.0%
GCAATTTACCAAAATGGCAT+GGG + chr2_2:6772971-6772990 Msa0234150:intron 35.0%
CAATTTACCAAAATGGCATG+GGG + chr2_2:6772972-6772991 Msa0234150:intron 35.0%
GCAAATTACCAAAATGGCAT+GGG - chr2_2:6773247-6773266 None:intergenic 35.0%
! TAACTTTTACAGGGACGAAA+TGG + chr2_2:6773314-6773333 Msa0234150:intron 35.0%
! AACTTTTACAGGGACGAAAT+GGG + chr2_2:6773315-6773334 Msa0234150:intron 35.0%
TTCAAATGGCCTATAATTGC+AGG + chr2_2:6773364-6773383 Msa0234150:intron 35.0%
TCAAATGGCCTATAATTGCA+GGG + chr2_2:6773365-6773384 Msa0234150:intron 35.0%
!!! GCTTGGTTTTGAAAAAGTGA+TGG + chr2_2:6773450-6773469 Msa0234150:intron 35.0%
! CAAGGAAAGAAAGTTTTTGC+TGG + chr2_2:6773830-6773849 Msa0234150:intron 35.0%
AGTAAATGCAGCAAGAATAG+TGG - chr2_2:6773908-6773927 None:intergenic 35.0%
! GATAGTGAAAAGAAAGCGTA+AGG - chr2_2:6774048-6774067 None:intergenic 35.0%
GTTTAAGGAATGAAAGTGAG+TGG - chr2_2:6774117-6774136 None:intergenic 35.0%
AAATGGGAGAGTTACCTAAA+GGG + chr2_2:6774410-6774429 Msa0234150:intron 35.0%
GTTACCTAAAGGGGTAAATA+TGG + chr2_2:6774420-6774439 Msa0234150:intron 35.0%
AATAACATAAAGGACCAGAG+TGG - chr2_2:6774642-6774661 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr2_2:6774779-6774798 None:intergenic 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG + chr2_2:6774983-6775002 Msa0234150:intron 35.0%
!! CCTCTTAGAGAGTTGATATT+TGG - chr2_2:6775293-6775312 None:intergenic 35.0%
CCAAATATCAACTCTCTAAG+AGG + chr2_2:6775290-6775309 Msa0234150:intron 35.0%
! TATCAACTCTCTAAGAGGTT+TGG + chr2_2:6775295-6775314 Msa0234150:intron 35.0%
AAACCGAATTAAAACAGCAG+TGG + chr2_2:6775325-6775344 Msa0234150:intron 35.0%
TGAGGAAATTTGTGCAGAAA+GGG - chr2_2:6775393-6775412 None:intergenic 35.0%
TTGAGGAAATTTGTGCAGAA+AGG - chr2_2:6775394-6775413 None:intergenic 35.0%
! ATGAGGCATTACCAATATTG+AGG - chr2_2:6775411-6775430 None:intergenic 35.0%
AGTTGATCCAACGAATTGAA+TGG - chr2_2:6775595-6775614 None:intergenic 35.0%
AATGTAGGTGCACATACATT+CGG + chr2_2:6775759-6775778 Msa0234150:intron 35.0%
TTATACAACTTCAGCAGTAC+AGG + chr2_2:6775813-6775832 Msa0234150:CDS 35.0%
TTACGCAAAATATGCCCTAA+TGG + chr2_2:6775876-6775895 Msa0234150:CDS 35.0%
AAATTGGCTAGGTTATTTGG+TGG - chr2_2:6775906-6775925 None:intergenic 35.0%
CAAATTTATCAGGAGTCGTT+GGG - chr2_2:6775932-6775951 None:intergenic 35.0%
TCAAATTTATCAGGAGTCGT+TGG - chr2_2:6775933-6775952 None:intergenic 35.0%
AACTACTACTCCAATCTTCA+GGG + chr2_2:6775957-6775976 Msa0234150:CDS 35.0%
TCCAATCTTCAGGGTAAAAA+GGG + chr2_2:6775966-6775985 Msa0234150:CDS 35.0%
!! GAACTTGTTGACAATGCTAA+TGG - chr2_2:6776039-6776058 None:intergenic 35.0%
TGAAGCCGCAATGATTAAAA+TGG + chr2_2:6776091-6776110 Msa0234150:CDS 35.0%
GAAGCCGCAATGATTAAAAT+GGG + chr2_2:6776092-6776111 Msa0234150:CDS 35.0%
!!! TCTAATCTCTCCTTTTTTCC+CGG - chr2_2:6776135-6776154 None:intergenic 35.0%
CTAGCTTGAAATGTAGTGAT+TGG + chr2_2:6776262-6776281 Msa0234150:three_prime_UTR 35.0%
ACATGTGTCACATAGTTACT+AGG + chr2_2:6776324-6776343 Msa0234150:three_prime_UTR 35.0%
AACTTGATCCTTCCTTCTAC+AGG + chr2_2:6770092-6770111 Msa0234150:CDS 40.0%
ACTTGATCCTTCCTTCTACA+GGG + chr2_2:6770093-6770112 Msa0234150:CDS 40.0%
TTCCATGTTAGGGTTGTTTG+TGG + chr2_2:6770785-6770804 Msa0234150:intron 40.0%
! TGGTGGACCACCTTTAAATA+TGG - chr2_2:6771269-6771288 None:intergenic 40.0%
!! AGGAAAGCGTTGGATCATAT+AGG + chr2_2:6771338-6771357 Msa0234150:intron 40.0%
CACCACTGTTTCGCTTAAAA+AGG - chr2_2:6771739-6771758 None:intergenic 40.0%
GGATTCAGTTCTTCTGTATC+TGG + chr2_2:6771930-6771949 Msa0234150:intron 40.0%
ACCTTTGTATCCTCTCCTTA+TGG + chr2_2:6772184-6772203 Msa0234150:intron 40.0%
ATGAAAAGAGCCATAAGGAG+AGG - chr2_2:6772197-6772216 None:intergenic 40.0%
! CTTTTCGTCCCTGCAATTAT+AGG + chr2_2:6772842-6772861 Msa0234150:intron 40.0%
CTCAGGGACGAAAATTCAAA+TGG - chr2_2:6773350-6773369 None:intergenic 40.0%
TGACGTGGCAGTGATTAAAA+GGG - chr2_2:6772951-6772970 None:intergenic 40.0%
GGCAAATTACCAAAATGGCA+TGG - chr2_2:6773248-6773267 None:intergenic 40.0%
ACGTCGGCAAATTACCAAAA+TGG - chr2_2:6773253-6773272 None:intergenic 40.0%
!! ATTTTGGTAATTTGCCGACG+TGG + chr2_2:6773252-6773271 Msa0234150:intron 40.0%
CTCAGGGACGAAAATTCAAA+TGG + chr2_2:6773350-6773369 Msa0234150:intron 40.0%
! CTTTTCGTCCCTGCAATTAT+AGG - chr2_2:6772842-6772861 None:intergenic 40.0%
!!! TTTCCTTTTGCTGTTTGGCT+TGG + chr2_2:6773433-6773452 Msa0234150:intron 40.0%
AAACCAAGCCAAACAGCAAA+AGG - chr2_2:6773439-6773458 None:intergenic 40.0%
! GAAATCGTTAAGGGTGTGTT+TGG + chr2_2:6773726-6773745 Msa0234150:intron 40.0%
TCCAAGGAAAGAAAGATGAG+TGG + chr2_2:6773750-6773769 Msa0234150:intron 40.0%
TCCACTCATCTTTCTTTCCT+TGG - chr2_2:6773754-6773773 None:intergenic 40.0%
AGGAAAGAAAGATGAGTGGA+TGG + chr2_2:6773754-6773773 Msa0234150:intron 40.0%
GGAAAGAAAGATGAGTGGAT+GGG + chr2_2:6773755-6773774 Msa0234150:intron 40.0%
GAAGAAACAATTCCCATGTG+GGG - chr2_2:6773857-6773876 None:intergenic 40.0%
CGAAGAAACAATTCCCATGT+GGG - chr2_2:6773858-6773877 None:intergenic 40.0%
TTCGTCACGTATCTTGTGTT+TGG - chr2_2:6774278-6774297 None:intergenic 40.0%
TTTACACTCAGCCGTTGAAA+TGG + chr2_2:6774393-6774412 Msa0234150:intron 40.0%
TTACACTCAGCCGTTGAAAT+GGG + chr2_2:6774394-6774413 Msa0234150:intron 40.0%
AGGTAACTCTCCCATTTCAA+CGG - chr2_2:6774407-6774426 None:intergenic 40.0%
GAAATGGGAGAGTTACCTAA+AGG + chr2_2:6774409-6774428 Msa0234150:intron 40.0%
AATGGGAGAGTTACCTAAAG+GGG + chr2_2:6774411-6774430 Msa0234150:intron 40.0%
GCAGCAGTATCTATGAGTAT+AGG - chr2_2:6774875-6774894 None:intergenic 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG + chr2_2:6774982-6775001 Msa0234150:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG + chr2_2:6774984-6775003 Msa0234150:intron 40.0%
TTCCTTAACTTATGCCCCAA+GGG - chr2_2:6775001-6775020 None:intergenic 40.0%
CTCCTTAACTTATGCCCTAA+GGG + chr2_2:6775123-6775142 Msa0234150:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr2_2:6775140-6775159 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr2_2:6775141-6775160 None:intergenic 40.0%
AGCATCTTGTTCACTCACAA+TGG - chr2_2:6775267-6775286 None:intergenic 40.0%
TCAGCACAAGAAACTGTGTT+AGG - chr2_2:6775362-6775381 None:intergenic 40.0%
! TGTATGTATTGACAGGCAGA+TGG + chr2_2:6775490-6775509 Msa0234150:intron 40.0%
AAACCATCCCTTCTTCCTAA+GGG - chr2_2:6775532-6775551 None:intergenic 40.0%
TAAACCATCCCTTCTTCCTA+AGG - chr2_2:6775533-6775552 None:intergenic 40.0%
!!! GATTTTGATTAGCGAGCGAT+TGG - chr2_2:6775564-6775583 None:intergenic 40.0%
GCTCGCTAATCAAAATCTTC+CGG + chr2_2:6775567-6775586 Msa0234150:CDS 40.0%
! AAATCTGCATTTGCTGCTCA+AGG + chr2_2:6775616-6775635 Msa0234150:CDS 40.0%
CAACTAGATCAGTAGTACTG+AGG - chr2_2:6775642-6775661 None:intergenic 40.0%
GTTGTGTTAAGAGTTGGATC+AGG - chr2_2:6775843-6775862 None:intergenic 40.0%
GAACTACTACTCCAATCTTC+AGG + chr2_2:6775956-6775975 Msa0234150:CDS 40.0%
CTCCAATCTTCAGGGTAAAA+AGG + chr2_2:6775965-6775984 Msa0234150:CDS 40.0%
! ACCCTTTTTACCCTGAAGAT+TGG - chr2_2:6775970-6775989 None:intergenic 40.0%
CAGATGTTGAGAAAAGCTCT+TGG - chr2_2:6776007-6776026 None:intergenic 40.0%
! CAAGAGCTTTTCTCAACATC+TGG + chr2_2:6776005-6776024 Msa0234150:CDS 40.0%
TGAACTTGGTCTAGTGAATG+TGG + chr2_2:6776187-6776206 Msa0234150:CDS 40.0%
TAGTTACTAGGTGCTTTGTG+AGG + chr2_2:6776336-6776355 Msa0234150:three_prime_UTR 40.0%
AGTTACTAGGTGCTTTGTGA+GGG + chr2_2:6776337-6776356 Msa0234150:three_prime_UTR 40.0%
AGTTGTGCATCTGAGGAGAA+GGG - chr2_2:6770076-6770095 None:intergenic 45.0%
AAGTTGTGCATCTGAGGAGA+AGG - chr2_2:6770077-6770096 None:intergenic 45.0%
! AGGATCAAGTTGTGCATCTG+AGG - chr2_2:6770083-6770102 None:intergenic 45.0%
TAACGTGTCAGTGTTAGGTC+TGG + chr2_2:6770415-6770434 Msa0234150:intron 45.0%
CTCCACAAACAACCCTAACA+TGG - chr2_2:6770790-6770809 None:intergenic 45.0%
!!! AAACCGTACGCGTTTTGGTT+CGG + chr2_2:6770855-6770874 Msa0234150:intron 45.0%
AAACCGAACCAAAACGCGTA+CGG - chr2_2:6770861-6770880 None:intergenic 45.0%
GGAGAGGATACAAAGGTGAT+AGG - chr2_2:6772181-6772200 None:intergenic 45.0%
GCCATAAGGAGAGGATACAA+AGG - chr2_2:6772188-6772207 None:intergenic 45.0%
ACAATGGACCTGCAATCGAA+TGG + chr2_2:6772551-6772570 Msa0234150:intron 45.0%
GACTTCAACCATTCGATTGC+AGG - chr2_2:6772562-6772581 None:intergenic 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG - chr2_2:6773334-6773353 None:intergenic 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG - chr2_2:6773333-6773352 None:intergenic 45.0%
! TTTTACAGGGACGAAATGGG+AGG - chr2_2:6773318-6773337 None:intergenic 45.0%
GCAGTGATTAAAAGGGGAGA+GGG - chr2_2:6773274-6773293 None:intergenic 45.0%
GACGTGGCAGTGATTAAAAG+GGG - chr2_2:6773268-6773287 None:intergenic 45.0%
CTGACGTGGCAGTGATTAAA+AGG - chr2_2:6772952-6772971 None:intergenic 45.0%
!! GTCAATTCCCCATGCCATTT+TGG - chr2_2:6772982-6773001 None:intergenic 45.0%
GGAATTGACGAAAATACCCC+TGG + chr2_2:6772993-6773012 Msa0234150:intron 45.0%
!! CGTCAATTCCCATGCCATTT+TGG + chr2_2:6773236-6773255 Msa0234150:intron 45.0%
! CCTTTTAATCACTGCCACGT+CGG - chr2_2:6772949-6772968 None:intergenic 45.0%
CGACGTGGCAGTGATTAAAA+GGG + chr2_2:6773267-6773286 Msa0234150:intron 45.0%
GACGTGGCAGTGATTAAAAG+GGG + chr2_2:6773268-6773287 Msa0234150:intron 45.0%
GCAGTGATTAAAAGGGGAGA+GGG + chr2_2:6773274-6773293 Msa0234150:intron 45.0%
! TTTTACAGGGACGAAATGGG+AGG + chr2_2:6773318-6773337 Msa0234150:intron 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG + chr2_2:6773333-6773352 Msa0234150:intron 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG + chr2_2:6773334-6773353 Msa0234150:intron 45.0%
! TAAGGGTGTGTTTGGTTCCA+AGG + chr2_2:6773734-6773753 Msa0234150:intron 45.0%
GCGAAGAAACAATTCCCATG+TGG - chr2_2:6773859-6773878 None:intergenic 45.0%
TAAGCTGCAGTACTGCATGA+TGG + chr2_2:6774355-6774374 Msa0234150:intron 45.0%
TAAAGGACCAGAGTGGTTGA+CGG - chr2_2:6774635-6774654 None:intergenic 45.0%
ACTCATAGATACTGCTGCAG+TGG + chr2_2:6774877-6774896 Msa0234150:intron 45.0%
GTTCCTTAACTTATGCCCCA+AGG - chr2_2:6775002-6775021 None:intergenic 45.0%
GCTCCTTAACTTATGCCCTA+AGG + chr2_2:6775122-6775141 Msa0234150:intron 45.0%
TGCCCTTAGGGCATAAGTTA+AGG - chr2_2:6775128-6775147 None:intergenic 45.0%
CCTAAGGGAACCTTCCAATT+AGG - chr2_2:6775517-6775536 None:intergenic 45.0%
CCTAATTGGAAGGTTCCCTT+AGG + chr2_2:6775514-6775533 Msa0234150:CDS 45.0%
GAAGGTTCCCTTAGGAAGAA+GGG + chr2_2:6775522-6775541 Msa0234150:CDS 45.0%
TTGATTAGCGAGCGATTGGT+TGG - chr2_2:6775560-6775579 None:intergenic 45.0%
TCCAACGAATTGAATGGAGC+CGG - chr2_2:6775589-6775608 None:intergenic 45.0%
ACTGATCTAGTTGCTCTCTC+AGG + chr2_2:6775649-6775668 Msa0234150:CDS 45.0%
CGCAAAATATGCCCTAATGG+CGG + chr2_2:6775879-6775898 Msa0234150:CDS 45.0%
! TATTTGGTGGTCCGCCATTA+GGG - chr2_2:6775893-6775912 None:intergenic 45.0%
! TTATTTGGTGGTCCGCCATT+AGG - chr2_2:6775894-6775913 None:intergenic 45.0%
TCGTTGGGTCAAAATTGGCT+AGG - chr2_2:6775917-6775936 None:intergenic 45.0%
AGGAGTCGTTGGGTCAAAAT+TGG - chr2_2:6775922-6775941 None:intergenic 45.0%
! GGTAATATTGGTGTGCTGAC+CGG + chr2_2:6776113-6776132 Msa0234150:CDS 45.0%
! GTAATATTGGTGTGCTGACC+GGG + chr2_2:6776114-6776133 Msa0234150:CDS 45.0%
TGTGGCTTCCACAGATTCAT+CGG + chr2_2:6776205-6776224 Msa0234150:CDS 45.0%
TTCCACAGATTCATCGGGTA+TGG + chr2_2:6776211-6776230 Msa0234150:CDS 45.0%
AACCATACCCGATGAATCTG+TGG - chr2_2:6776216-6776235 None:intergenic 45.0%
!!! TTTTTTTTGTTTATTAATAA+TGG + chr2_2:6772326-6772345 Msa0234150:intron 5.0%
!!! TTTTTTTGTTTATTAATAAT+GGG + chr2_2:6772327-6772346 Msa0234150:intron 5.0%
!!! TTAATTTAATCTATATTTTT+AGG - chr2_2:6772734-6772753 None:intergenic 5.0%
!!! AAAATTTTGAAATTTTTTTA+AGG - chr2_2:6773031-6773050 None:intergenic 5.0%
!! TTAAAAATCATAAAAAATTT+CGG + chr2_2:6773081-6773100 Msa0234150:intron 5.0%
!!! TCTTTTATTATAATTTTTTT+TGG + chr2_2:6773984-6774003 Msa0234150:intron 5.0%
AGCTGTCAACGTGAGACCAA+AGG - chr2_2:6770020-6770039 None:intergenic 50.0%
TGCTGCGTAGTGGTTGTTCT+TGG + chr2_2:6770043-6770062 Msa0234150:CDS 50.0%
TGCGTAGTGGTTGTTCTTGG+AGG + chr2_2:6770046-6770065 Msa0234150:CDS 50.0%
GCGTAGTGGTTGTTCTTGGA+GGG + chr2_2:6770047-6770066 Msa0234150:CDS 50.0%
CAAGTGTCCCTGTAGAAGGA+AGG - chr2_2:6770103-6770122 None:intergenic 50.0%
TGGACAAGTGTCCCTGTAGA+AGG - chr2_2:6770107-6770126 None:intergenic 50.0%
CTACAGGGACACTTGTCCAA+AGG + chr2_2:6770108-6770127 Msa0234150:CDS 50.0%
ACGAGACTAGCAAGCATACG+AGG - chr2_2:6770181-6770200 None:intergenic 50.0%
GGGTTGTTTGTGGAGCAGTT+TGG + chr2_2:6770795-6770814 Msa0234150:intron 50.0%
!!! GTACGCGTTTTGGTTCGGTT+TGG + chr2_2:6770860-6770879 Msa0234150:intron 50.0%
GGCAGTGATTAAAAGGGGAG+AGG - chr2_2:6773273-6773292 None:intergenic 50.0%
CCGACGTGGCAGTGATTAAA+AGG + chr2_2:6773266-6773285 Msa0234150:intron 50.0%
GGCAGTGATTAAAAGGGGAG+AGG + chr2_2:6773273-6773292 Msa0234150:intron 50.0%
TGAGTGGATGGGAAAGAGAG+TGG + chr2_2:6773766-6773785 Msa0234150:intron 50.0%
TCGCTAGAGAGAGCAGAAAG+TGG + chr2_2:6773875-6773894 Msa0234150:intron 50.0%
GGTTGACGGAGGAAGAGTTA+AGG - chr2_2:6774621-6774640 None:intergenic 50.0%
TGCCCTTGGGGCATAAGTTA+AGG + chr2_2:6774996-6775015 Msa0234150:intron 50.0%
GACAGGCAGATGGTCCTAAT+TGG + chr2_2:6775500-6775519 Msa0234150:intron 50.0%
GGCAGATGGTCCTAATTGGA+AGG + chr2_2:6775504-6775523 Msa0234150:intron 50.0%
GGAAGGTTCCCTTAGGAAGA+AGG + chr2_2:6775521-6775540 Msa0234150:CDS 50.0%
GTTCCCTTAGGAAGAAGGGA+TGG + chr2_2:6775526-6775545 Msa0234150:CDS 50.0%
! ATTAGCGAGCGATTGGTTGG+CGG - chr2_2:6775557-6775576 None:intergenic 50.0%
TCCGGCTCCATTCAATTCGT+TGG + chr2_2:6775585-6775604 Msa0234150:CDS 50.0%
GTGGCTTCCACAGATTCATC+GGG + chr2_2:6776206-6776225 Msa0234150:CDS 50.0%
GACAGCTCTATGCTGCGTAG+TGG + chr2_2:6770033-6770052 Msa0234150:CDS 55.0%
CTGGGTTGTTCTTCTGCACC+CGG + chr2_2:6771949-6771968 Msa0234150:intron 55.0%
!! GGTGATAGGCTGAGAGTGCT+TGG - chr2_2:6772167-6772186 None:intergenic 55.0%
! AGTTTTTGCTGGGCCCCACA+TGG + chr2_2:6773841-6773860 Msa0234150:intron 55.0%
! GTTTTTGCTGGGCCCCACAT+GGG + chr2_2:6773842-6773861 Msa0234150:intron 55.0%
TCTTCCTCCGTCAACCACTC+TGG + chr2_2:6774625-6774644 Msa0234150:intron 55.0%
! GGTGTGCTGACCGGGAAAAA+AGG + chr2_2:6776122-6776141 Msa0234150:CDS 55.0%
AGGACCAGAGTGGTTGACGG+AGG - chr2_2:6774632-6774651 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 6769822 6776448 6769822 ID=Msa0234150;Name=Msa0234150
chr2_2 mRNA 6769822 6776448 6769822 ID=Msa0234150-mRNA-1;Parent=Msa0234150;Name=Msa0234150-mRNA-1;_AED=0.11;_eAED=0.11;_QI=161|0.5|1|1|1|1|3|201|298
chr2_2 exon 6769822 6770231 6769822 ID=Msa0234150-mRNA-1:exon:2955;Parent=Msa0234150-mRNA-1
chr2_2 exon 6775505 6775670 6775505 ID=Msa0234150-mRNA-1:exon:2956;Parent=Msa0234150-mRNA-1
chr2_2 exon 6775766 6776448 6775766 ID=Msa0234150-mRNA-1:exon:2957;Parent=Msa0234150-mRNA-1
chr2_2 five_prime_UTR 6769822 6769982 6769822 ID=Msa0234150-mRNA-1:five_prime_utr;Parent=Msa0234150-mRNA-1
chr2_2 CDS 6769983 6770231 6769983 ID=Msa0234150-mRNA-1:cds;Parent=Msa0234150-mRNA-1
chr2_2 CDS 6775505 6775670 6775505 ID=Msa0234150-mRNA-1:cds;Parent=Msa0234150-mRNA-1
chr2_2 CDS 6775766 6776247 6775766 ID=Msa0234150-mRNA-1:cds;Parent=Msa0234150-mRNA-1
chr2_2 three_prime_UTR 6776248 6776448 6776248 ID=Msa0234150-mRNA-1:three_prime_utr;Parent=Msa0234150-mRNA-1
Gene Sequence

>Msa0234150

ATGCCCAATCATACTCATAACAACAAAATGAACTCCTTTGGTCTCACGTTGACAGCTCTATGCTGCGTAGTGGTTGTTCTTGGAGGGTTACCCTTCTCCTCAGATGCACAACTTGATCCTTCCTTCTACAGGGACACTTGTCCAAAGGTTCATTCCATTATTCGTGAAGTCATAAGGAACGTCTCTAAAACAGATCCTCGTATGCTTGCTAGTCTCGTCAGACTTCACTTTCATGACTGTTTTGTTCTGGCAGATGGTCCTAATTGGAAGGTTCCCTTAGGAAGAAGGGATGGTTTAACCGCCAACCAATCGCTCGCTAATCAAAATCTTCCGGCTCCATTCAATTCGTTGGATCAACTTAAATCTGCATTTGCTGCTCAAGGCCTCAGTACTACTGATCTAGTTGCTCTCTCAGGTGCACATACATTCGGAAGAGCACGTTGCACTTTCATCACTGATCGATTATACAACTTCAGCAGTACAGGAAAACCTGATCCAACTCTTAACACAACTTATTTACAAGAATTACGCAAAATATGCCCTAATGGCGGACCACCAAATAACCTAGCCAATTTTGACCCAACGACTCCTGATAAATTTGACAAGAACTACTACTCCAATCTTCAGGGTAAAAAGGGTTTGCTTCAGAGTGACCAAGAGCTTTTCTCAACATCTGGTGCTGATACCATTAGCATTGTCAACAAGTTCAGTGCTGACAAAAATGCTTTCTTTGATAGCTTTGAAGCCGCAATGATTAAAATGGGTAATATTGGTGTGCTGACCGGGAAAAAAGGAGAGATTAGAAAACATTGCAATTTTGTTAATTCAAAATCAGTTGAACTTGGTCTAGTGAATGTGGCTTCCACAGATTCATCGGGTATGGTTAGCTCAATTTAA
Protein sequence

>Msa0234150

MPNHTHNNKMNSFGLTLTALCCVVVVLGGLPFSSDAQLDPSFYRDTCPKVHSIIREVIRNVSKTDPRMLASLVRLHFHDCFVLADGPNWKVPLGRRDGLTANQSLANQNLPAPFNSLDQLKSAFAAQGLSTTDLVALSGAHTFGRARCTFITDRLYNFSSTGKPDPTLNTTYLQELRKICPNGGPPNNLANFDPTTPDKFDKNYYSNLQGKKGLLQSDQELFSTSGADTISIVNKFSADKNAFFDSFEAAMIKMGNIGVLTGKKGEIRKHCNFVNSKSVELGLVNVASTDSSGMVSSI*