AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1103650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103650 MtrunA17_Chr7g0234201 99.074 216 1 1 1 216 1 215 1.58e-154 426
Msa1103650 MtrunA17_Chr7g0214241 80.193 207 38 1 13 216 14 220 4.15e-120 340
Msa1103650 MtrunA17_Chr1g0189361 71.875 192 54 0 1 192 1 192 7.44e-96 278
Msa1103650 MtrunA17_Chr4g0032201 56.098 205 90 0 12 216 10 214 1.76e-81 242
Msa1103650 MtrunA17_Chr3g0123821 55.981 209 86 2 12 215 14 221 7.06e-80 238
Msa1103650 MtrunA17_Chr8g0381841 63.068 176 65 0 12 187 15 190 3.02e-79 236
Msa1103650 MtrunA17_Chr3g0112681 56.190 210 83 2 12 216 10 215 1.26e-78 234
Msa1103650 MtrunA17_Chr1g0174281 53.333 210 92 1 12 215 13 222 3.09e-78 234
Msa1103650 MtrunA17_Chr2g0315551 61.850 173 66 0 12 184 11 183 2.49e-77 231
Msa1103650 MtrunA17_Chr2g0276941 53.521 213 92 3 10 216 8 219 3.20e-77 231
Msa1103650 MtrunA17_Chr7g0231131 54.286 210 88 2 12 213 13 222 1.59e-76 229
Msa1103650 MtrunA17_Chr4g0040781 55.502 209 86 2 12 216 11 216 1.61e-76 229
Msa1103650 MtrunA17_Chr2g0283131 54.930 213 81 3 12 216 11 216 2.75e-76 229
Msa1103650 MtrunA17_Chr2g0319951 60.571 175 69 0 12 186 11 185 2.81e-76 229
Msa1103650 MtrunA17_Chr8g0351861 60.674 178 70 0 10 187 12 189 3.45e-76 229
Msa1103650 MtrunA17_Chr4g0046261 54.545 209 88 2 12 216 11 216 1.59e-75 227
Msa1103650 MtrunA17_Chr2g0325091 56.098 205 90 0 12 216 9 213 1.82e-75 226
Msa1103650 MtrunA17_Chr7g0275991 53.571 196 88 1 12 204 18 213 2.32e-71 216
Msa1103650 MtrunA17_Chr8g0346421 51.208 207 97 2 12 214 24 230 1.65e-70 214
Msa1103650 MtrunA17_Chr6g0482721 58.960 173 71 0 12 184 10 182 2.82e-65 201
Msa1103650 MtrunA17_Chr8g0392931 55.851 188 81 1 12 199 12 197 1.88e-62 193
Msa1103650 MtrunA17_Chr7g0250531 46.829 205 100 1 12 216 6 201 3.69e-60 187
Msa1103650 MtrunA17_Chr4g0055651 46.829 205 100 1 12 216 6 201 1.81e-59 185
Msa1103650 MtrunA17_Chr2g0276931 49.153 177 90 0 12 188 7 183 5.43e-59 184
Msa1103650 MtrunA17_Chr2g0290891 44.928 207 111 1 13 216 5 211 8.50e-58 181
Msa1103650 MtrunA17_Chr8g0335471 45.411 207 101 2 12 216 6 202 1.39e-55 176
Msa1103650 MtrunA17_Chr6g0458081 43.269 208 115 1 12 216 4 211 3.05e-55 175
Msa1103650 MtrunA17_Chr1g0182321 43.689 206 110 4 12 215 13 214 5.73e-54 172
Msa1103650 MtrunA17_Chr1g0182301 43.689 206 110 4 12 215 13 214 9.44e-54 171
Msa1103650 MtrunA17_Chr1g0212521 41.463 205 116 2 12 215 13 214 6.20e-53 169
Msa1103650 MtrunA17_Chr4g0030911 42.718 206 111 4 12 215 13 213 7.39e-53 169
Msa1103650 MtrunA17_Chr8g0349711 50.292 171 85 0 13 183 5 175 5.60e-52 167
Msa1103650 MtrunA17_Chr7g0263071 47.879 165 85 1 12 175 13 177 5.53e-51 164
Msa1103650 MtrunA17_Chr2g0327911 39.048 210 120 4 8 215 9 212 3.45e-50 162
Msa1103650 MtrunA17_Chr8g0384311 44.495 218 87 7 12 215 11 208 8.31e-49 158
Msa1103650 MtrunA17_Chr8g0349681 43.192 213 113 2 7 216 377 584 6.92e-48 165
Msa1103650 MtrunA17_Chr8g0349681 46.237 186 96 1 2 183 159 344 1.99e-45 159
Msa1103650 MtrunA17_Chr8g0349681 49.045 157 80 0 13 169 12 168 5.59e-43 152
Msa1103650 MtrunA17_Chr3g0109721 40.000 205 103 4 16 216 12 200 1.48e-45 150
Msa1103650 MtrunA17_Chr1g0199331 42.286 175 100 1 2 175 19 193 1.58e-45 150
Msa1103650 MtrunA17_Chr1g0159481 42.273 220 92 7 12 216 15 214 2.30e-45 150
Msa1103650 MtrunA17_Chr3g0130271 42.661 218 92 8 12 215 10 208 9.45e-45 148
Msa1103650 MtrunA17_Chr7g0265001 49.682 157 77 2 15 169 17 173 4.78e-44 146
Msa1103650 MtrunA17_Chr5g0433561 38.049 205 107 4 16 216 12 200 9.44e-44 145
Msa1103650 MtrunA17_Chr1g0180291 50.943 159 71 4 15 169 15 170 1.81e-43 145
Msa1103650 MtrunA17_Chr3g0123971 41.558 154 90 0 15 168 10 163 1.03e-42 143
Msa1103650 MtrunA17_Chr5g0400131 42.208 154 89 0 15 168 10 163 1.90e-42 142
Msa1103650 MtrunA17_Chr8g0382221 41.558 154 90 0 15 168 10 163 2.33e-42 142
Msa1103650 MtrunA17_Chr8g0390561 42.857 168 95 1 16 182 11 178 6.39e-41 138
Msa1103650 MtrunA17_Chr4g0055081 40.260 154 92 0 15 168 10 163 1.88e-40 137
Msa1103650 MtrunA17_Chr1g0197331 44.211 190 89 6 12 195 13 191 2.15e-40 137
Msa1103650 MtrunA17_Chr6g0466301 40.123 162 90 3 14 168 8 169 1.61e-35 124
Msa1103650 MtrunA17_Chr6g0465491 40.123 162 90 3 14 168 8 169 1.61e-35 124
Msa1103650 MtrunA17_Chr2g0331691 36.628 172 102 3 14 178 10 181 2.13e-34 121
Msa1103650 MtrunA17_Chr8g0383261 37.725 167 97 3 14 173 12 178 2.72e-34 121
Msa1103650 MtrunA17_Chr1g0201121 36.628 172 102 2 14 178 8 179 5.97e-34 120
Msa1103650 MtrunA17_Chr4g0034871 35.119 168 102 3 14 174 8 175 5.78e-33 117
Msa1103650 MtrunA17_Chr4g0004661 36.047 172 103 3 14 178 64 235 6.81e-33 119
Msa1103650 MtrunA17_Chr6g0465471 34.868 152 92 2 29 173 5 156 1.91e-23 93.2
Msa1103650 MtrunA17_Chr6g0466161 34.395 157 96 2 29 178 5 161 2.14e-23 93.2
Msa1103650 MtrunA17_Chr3g0138101 28.571 161 112 3 15 175 14 171 3.07e-20 85.1
Msa1103650 MtrunA17_Chr3g0138121 28.571 161 112 3 15 175 14 171 3.11e-20 85.1
Msa1103650 MtrunA17_Chr3g0138111 28.571 161 112 3 15 175 14 171 3.31e-20 85.1
Msa1103650 MtrunA17_Chr2g0325101 32.184 174 104 5 14 175 6 177 7.15e-20 83.6
Msa1103650 MtrunA17_Chr3g0117931 30.460 174 107 5 14 175 8 179 6.54e-19 81.3
Msa1103650 MtrunA17_Chr5g0405791 29.885 174 108 5 14 175 6 177 6.57e-18 78.6
Msa1103650 MtrunA17_Chr8g0371501 29.310 174 109 5 14 175 6 177 1.18e-17 77.8
Msa1103650 MtrunA17_Chr4g0046211 33.333 132 85 3 14 144 6 135 1.19e-17 76.6
Msa1103650 MtrunA17_Chr6g0486041 29.834 181 113 5 14 182 6 184 1.23e-17 77.8
Msa1103650 MtrunA17_Chr6g0466431 35.000 100 56 1 14 113 8 98 1.27e-17 75.1
Msa1103650 MtrunA17_Chr6g0465611 35.000 100 56 1 14 113 8 98 1.27e-17 75.1
Msa1103650 MtrunA17_Chr4g0037021 28.729 181 115 5 14 182 6 184 1.71e-17 77.4
Msa1103650 MtrunA17_Chr5g0443631 24.118 170 119 4 15 177 105 271 3.67e-13 67.0
Msa1103650 MtrunA17_Chr2g0331841 47.222 72 37 1 83 153 2 73 4.42e-13 62.8
Msa1103650 MtrunA17_Chr1g0178291 27.711 166 113 3 17 182 431 589 2.34e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103650 AT3G07410.1 80.861 209 38 1 10 216 8 216 1.40e-122 346
Msa1103650 AT1G05810.1 79.439 214 42 1 5 216 3 216 3.69e-122 345
Msa1103650 AT1G05810.2 79.439 214 42 1 5 216 49 262 4.48e-122 347
Msa1103650 AT2G31680.1 79.070 215 42 2 5 216 3 217 5.30e-121 342
Msa1103650 AT2G43130.1 77.830 212 46 1 5 216 3 213 1.81e-119 338
Msa1103650 AT5G47520.1 64.091 220 75 1 1 216 1 220 4.19e-97 282
Msa1103650 AT1G07410.1 57.073 205 87 1 12 216 10 213 9.92e-81 240
Msa1103650 AT4G39990.1 55.769 208 89 2 12 216 15 222 2.51e-80 239
Msa1103650 AT1G09630.1 52.535 217 100 2 1 216 1 215 1.01e-79 238
Msa1103650 AT5G65270.1 53.991 213 86 3 12 215 15 224 1.30e-78 235
Msa1103650 AT4G18430.1 55.981 209 85 2 12 216 11 216 1.82e-78 234
Msa1103650 AT5G60860.1 56.938 209 83 2 12 216 11 216 2.01e-78 234
Msa1103650 AT3G12160.1 55.024 209 87 2 12 215 13 219 2.31e-78 234
Msa1103650 AT1G06400.1 56.039 207 87 3 12 216 11 215 3.15e-77 231
Msa1103650 AT1G28550.1 55.714 210 85 3 12 216 11 217 5.37e-77 231
Msa1103650 AT1G16920.1 63.158 171 63 0 12 182 11 181 7.30e-77 230
Msa1103650 AT5G59150.1 63.158 171 63 0 12 182 10 180 1.18e-76 230
Msa1103650 AT3G46830.1 62.573 171 64 0 12 182 10 180 1.32e-76 230
Msa1103650 AT3G46830.2 62.573 171 64 0 12 182 10 180 1.32e-76 230
Msa1103650 AT5G47960.1 62.428 173 65 0 12 184 13 185 5.55e-76 228
Msa1103650 AT4G18800.1 55.072 207 87 3 12 216 11 213 4.99e-75 226
Msa1103650 AT2G33870.1 52.582 213 95 3 8 216 7 217 7.31e-75 225
Msa1103650 AT3G15060.1 53.991 213 83 3 12 216 11 216 1.22e-74 225
Msa1103650 AT5G45750.1 52.683 205 97 0 12 216 11 215 2.25e-74 224
Msa1103650 AT1G73640.1 52.913 206 92 2 1 206 1 201 2.64e-69 212
Msa1103650 AT1G18200.1 58.152 184 76 1 1 184 1 183 1.71e-68 209
Msa1103650 AT1G01200.1 53.299 197 88 3 12 204 26 222 4.83e-66 204
Msa1103650 AT4G17170.1 45.146 206 110 1 13 215 5 210 1.49e-57 181
Msa1103650 AT4G35860.1 43.478 207 114 1 12 215 4 210 1.93e-57 181
Msa1103650 AT4G17530.1 44.878 205 104 1 12 216 6 201 7.83e-57 179
Msa1103650 AT3G11730.1 51.220 164 80 0 12 175 6 169 1.13e-55 176
Msa1103650 AT1G02130.1 42.927 205 109 1 12 216 6 202 2.59e-55 175
Msa1103650 AT5G47200.1 44.390 205 105 1 12 216 6 201 1.74e-54 173
Msa1103650 AT4G17160.1 49.711 173 87 0 13 185 5 177 2.04e-54 173
Msa1103650 AT5G59150.2 59.843 127 51 0 56 182 3 129 9.61e-53 167
Msa1103650 AT3G46060.2 42.439 205 114 3 12 215 13 214 1.97e-52 168
Msa1103650 AT3G46060.3 42.439 205 114 3 12 215 13 214 1.97e-52 168
Msa1103650 AT3G46060.1 42.439 205 114 3 12 215 13 214 1.97e-52 168
Msa1103650 AT5G59840.1 42.029 207 112 4 12 215 13 214 9.00e-52 167
Msa1103650 AT3G09900.1 44.498 209 107 4 12 216 13 216 1.08e-51 166
Msa1103650 AT3G53610.2 42.512 207 111 5 12 215 13 214 1.76e-51 166
Msa1103650 AT3G53610.3 42.512 207 111 5 12 215 13 214 1.76e-51 166
Msa1103650 AT3G53610.1 42.512 207 111 5 12 215 13 214 1.76e-51 166
Msa1103650 AT5G03520.1 43.478 207 110 4 12 216 13 214 2.99e-50 162
Msa1103650 AT1G43890.3 46.078 204 86 6 12 211 11 194 7.59e-47 154
Msa1103650 AT1G43890.1 46.078 204 86 6 12 211 11 194 7.59e-47 154
Msa1103650 AT1G43890.2 46.078 204 86 6 12 211 11 194 7.59e-47 154
Msa1103650 AT5G45130.1 40.299 201 108 4 16 216 12 200 7.80e-47 153
Msa1103650 AT3G54840.1 44.767 172 90 2 16 186 35 202 1.91e-46 152
Msa1103650 AT3G54840.2 47.097 155 81 1 16 169 35 189 3.64e-46 151
Msa1103650 AT3G54840.3 44.444 171 90 2 17 186 2 168 4.56e-46 150
Msa1103650 AT4G19640.1 37.624 202 112 3 16 216 12 200 1.21e-45 150
Msa1103650 AT5G45130.2 40.201 199 107 4 18 216 22 208 1.36e-45 150
Msa1103650 AT5G03530.2 43.925 214 105 6 8 216 7 210 1.01e-43 146
Msa1103650 AT5G03530.1 43.925 214 105 6 8 216 7 210 1.01e-43 146
Msa1103650 AT2G44610.1 42.208 154 89 0 15 168 10 163 1.27e-42 143
Msa1103650 AT4G35860.2 42.073 164 92 1 55 215 1 164 2.89e-42 140
Msa1103650 AT5G10260.1 40.909 154 91 0 15 168 10 163 5.71e-42 141
Msa1103650 AT2G22290.1 40.909 154 91 0 15 168 10 163 6.78e-41 139
Msa1103650 AT4G39890.1 41.290 155 90 1 15 168 10 164 1.40e-40 138
Msa1103650 AT5G64990.1 40.260 154 92 0 15 168 8 161 4.16e-39 134
Msa1103650 AT5G03520.2 41.176 170 93 4 49 216 40 204 3.15e-38 132
Msa1103650 AT5G64990.2 38.509 161 92 1 15 168 8 168 2.09e-36 127
Msa1103650 AT3G09910.5 43.182 176 93 4 8 179 7 179 7.76e-36 125
Msa1103650 AT3G09910.4 43.182 176 93 4 8 179 7 179 7.76e-36 125
Msa1103650 AT3G09910.3 45.181 166 84 4 8 169 7 169 2.09e-35 124
Msa1103650 AT3G09910.1 45.181 166 84 4 8 169 7 169 2.09e-35 124
Msa1103650 AT3G09910.2 45.181 166 84 4 8 169 7 169 2.09e-35 124
Msa1103650 AT1G22740.1 38.323 167 96 3 14 173 8 174 2.46e-35 124
Msa1103650 AT1G52280.1 37.209 172 101 3 14 178 8 179 2.29e-34 122
Msa1103650 AT4G19640.2 40.769 130 77 0 16 145 12 141 2.97e-34 119
Msa1103650 AT3G18820.1 37.500 168 98 3 14 174 8 175 3.02e-34 121
Msa1103650 AT2G21880.1 39.506 162 91 3 14 168 9 170 3.08e-34 121
Msa1103650 AT4G19640.3 40.458 131 78 0 16 146 12 142 7.84e-34 120
Msa1103650 AT3G16100.1 36.628 172 102 2 14 178 8 179 1.70e-33 119
Msa1103650 AT1G49300.2 37.037 162 95 3 14 168 8 169 3.18e-31 114
Msa1103650 AT1G49300.1 37.037 162 95 3 14 168 8 169 3.18e-31 114
Msa1103650 AT4G09720.1 35.465 172 104 2 14 178 8 179 3.94e-31 113
Msa1103650 AT4G09720.4 34.463 177 104 2 14 178 8 184 2.69e-30 111
Msa1103650 AT5G39620.1 36.702 188 111 5 11 191 2 188 4.29e-30 110
Msa1103650 AT5G46025.1 50.000 106 52 1 76 180 6 111 2.03e-29 106
Msa1103650 AT4G09720.3 33.333 183 104 2 14 178 8 190 3.82e-29 108
Msa1103650 AT2G21880.4 37.931 145 83 3 31 168 1 145 4.34e-26 100
Msa1103650 AT2G21880.3 37.931 145 83 3 31 168 1 145 4.34e-26 100
Msa1103650 AT2G21880.2 34.568 162 91 4 14 168 9 162 2.14e-24 95.9
Msa1103650 AT2G44690.1 33.333 180 106 6 14 181 18 195 8.98e-22 89.4
Msa1103650 AT5G55080.1 28.161 174 114 3 6 175 5 171 1.18e-21 89.4
Msa1103650 AT4G09720.6 35.915 142 84 2 44 178 4 145 1.54e-21 87.8
Msa1103650 AT4G09720.5 35.915 142 84 2 44 178 4 145 1.54e-21 87.8
Msa1103650 AT4G09720.2 35.915 142 84 2 44 178 4 145 1.54e-21 87.8
Msa1103650 AT5G20020.1 28.571 161 112 3 15 175 14 171 3.34e-20 85.5
Msa1103650 AT5G20010.1 28.571 161 112 3 15 175 14 171 4.96e-20 85.1
Msa1103650 AT5G55190.1 28.571 161 112 3 15 175 14 171 5.62e-20 84.7
Msa1103650 AT5G45970.1 30.233 172 106 5 14 173 6 175 2.64e-18 80.1
Msa1103650 AT5G62880.1 29.310 174 109 5 14 175 8 179 3.91e-18 79.7
Msa1103650 AT4G35020.1 29.310 174 109 5 14 175 6 177 5.27e-18 79.0
Msa1103650 AT4G35020.2 29.310 174 109 5 14 175 6 177 5.27e-18 79.0
Msa1103650 AT4G35020.3 29.310 174 109 5 14 175 6 177 5.27e-18 79.0
Msa1103650 AT3G48040.1 28.736 174 110 5 14 175 8 179 9.49e-18 78.6
Msa1103650 AT1G20090.1 29.310 174 109 5 14 175 5 176 1.59e-17 77.8
Msa1103650 AT3G51300.1 30.233 172 106 5 16 175 8 177 1.94e-17 77.4
Msa1103650 AT1G75840.1 28.736 174 110 5 14 175 6 177 2.57e-17 77.0
Msa1103650 AT2G17800.2 29.885 174 108 5 14 175 6 177 3.22e-17 77.0
Msa1103650 AT2G17800.1 29.885 174 108 5 14 175 6 177 3.22e-17 77.0
Msa1103650 AT4G28950.1 28.492 179 116 5 14 182 6 182 3.49e-17 77.0
Msa1103650 AT4G35950.1 29.310 174 109 5 14 175 6 177 3.65e-17 76.6
Msa1103650 AT5G62880.2 32.374 139 84 4 14 151 8 137 4.29e-16 73.9
Msa1103650 AT3G48040.2 31.724 145 89 4 14 157 8 143 1.21e-15 72.4
Msa1103650 AT4G35020.4 33.333 114 73 3 16 128 8 119 3.72e-14 67.4
Msa1103650 AT4G35020.5 33.333 114 73 3 16 128 8 119 3.72e-14 67.4
Msa1103650 AT4G08190.1 46.970 66 32 1 103 168 65 127 3.87e-12 61.6

Find 60 sgRNAs with CRISPR-Local

Find 500 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTATTTGTTATCGTATT+TGG 0.070797 7_3:+39752608 None:intergenic
AAGCCATAAAATTAACTTAT+TGG 0.148356 7_3:-39752590 Msa1103650:three_prime_UTR
AGAAGAAGGTTTGTTCTTTA+TGG 0.172410 7_3:-39753164 Msa1103650:CDS
CACAGACAATTCAGCTTTAT+AGG 0.206635 7_3:+39753042 None:intergenic
TTTCCCTAGCTACTATTTCT+TGG 0.259784 7_3:-39752864 Msa1103650:three_prime_UTR
GCTTATTATCGTGGTGCTTT+TGG 0.272296 7_3:-39761812 Msa1103650:CDS
AATCGAGTAACCCTGGTTAA+TGG 0.282441 7_3:-39753019 Msa1103650:CDS
AAAATATTGTTATAGTTTCA+TGG 0.317692 7_3:+39752732 None:intergenic
AATACTATATTCTCATTTGC+TGG 0.341987 7_3:-39752641 Msa1103650:three_prime_UTR
AAGAAGTGAAAGCACAGATC+TGG 0.376183 7_3:-39761874 Msa1103650:CDS
TCAAATTCAAAAGCAACAAT+TGG 0.379555 7_3:-39761935 Msa1103650:CDS
GGTGGGAAATAAGTGTGATT+TGG 0.403953 7_3:-39753233 Msa1103650:CDS
TTGTTGTTTATGATATTAGT+AGG 0.412303 7_3:-39761784 Msa1103650:CDS
TTAACTTTGAATTGATACTT+TGG 0.421538 7_3:-39752939 Msa1103650:three_prime_UTR
CAATTCAGCTTTATAGGAAT+CGG 0.426361 7_3:+39753048 None:intergenic
ATCGAGTAACCCTGGTTAAT+GGG 0.426791 7_3:-39753018 Msa1103650:CDS
CTCTTCAAAATCGTCCTAAT+CGG 0.438519 7_3:-39762016 Msa1103650:CDS
CTACGGCAGAGTCGCCGATT+AGG 0.443849 7_3:+39762002 None:intergenic
TTGAAGAGTGTGTGTGTGGA+TGG 0.450997 7_3:+39762123 None:intergenic
GTAACCCTGGTTAATGGGTC+TGG 0.458809 7_3:-39753013 Msa1103650:CDS
TGATATTATTGTAAATTTCA+CGG 0.460213 7_3:+39753089 None:intergenic
AAAAGCTCATCAAGAACAAC+AGG 0.467539 7_3:+39752967 None:intergenic
TGACAATCTCAAAAGCCGTT+TGG 0.477114 7_3:+39753113 None:intergenic
CTCAAAAGCCGTTTGGACAT+TGG 0.477298 7_3:+39753120 None:intergenic
AATCGGAGTTTAAGACTTTG+CGG 0.478253 7_3:+39753065 None:intergenic
GAACAACATACAGCTCTTGA+AGG 0.481104 7_3:+39752914 None:intergenic
GAACTCGTTTCGCGCGAATC+GGG 0.485723 7_3:+39761961 None:intergenic
TCTTTCAGAATGTATGGATG+AGG 0.489449 7_3:+39752789 None:intergenic
CAAACCTTCTTCTTCTGCAA+GGG 0.490087 7_3:+39753174 None:intergenic
CGATTCTACCAATGTCCAAA+CGG 0.506467 7_3:-39753128 Msa1103650:CDS
AAAGCCCTTGCAGAAGAAGA+AGG 0.508966 7_3:-39753178 Msa1103650:CDS
AGAAGTGAAAGCACAGATCT+GGG 0.521054 7_3:-39761873 Msa1103650:CDS
GTTACTTCTGCTTATTATCG+TGG 0.527788 7_3:-39761821 Msa1103650:CDS
AATGCCAAGAAATAGTAGCT+AGG 0.529928 7_3:+39752860 None:intergenic
GCACAGATCTGGGATACTGC+TGG 0.534325 7_3:-39761863 Msa1103650:CDS
ATGCCAAGAAATAGTAGCTA+GGG 0.535914 7_3:+39752861 None:intergenic
CACCGTTGCGAGAATGTTGG+TGG 0.536683 7_3:-39753251 Msa1103650:CDS
TCAGAAGAAAACAACGAAGA+AGG 0.540081 7_3:-39762052 Msa1103650:CDS
CGTTTCGCGCGAATCGGGAG+AGG 0.545663 7_3:+39761966 None:intergenic
TTGAACCAGACCCATTAACC+AGG 0.551489 7_3:+39753008 None:intergenic
GTTTATGATATTAGTAGGAG+AGG 0.553351 7_3:-39761779 Msa1103650:CDS
GGGATACTGCTGGACAAGAA+AGG 0.554659 7_3:-39761853 Msa1103650:CDS
TTCGCGCGAATCGGGAGAGG+AGG 0.560289 7_3:+39761969 None:intergenic
ACAAACCTTCTTCTTCTGCA+AGG 0.560683 7_3:+39753173 None:intergenic
CTTTCAGAATGTATGGATGA+GGG 0.572561 7_3:+39752790 None:intergenic
GTCTGTGAATCGAGTAACCC+TGG 0.578070 7_3:-39753026 Msa1103650:CDS
GAAGAAAACAACGAAGAAGG+AGG 0.579942 7_3:-39762049 Msa1103650:CDS
TGAGTTTCAGACGCAGATGG+TGG 0.580080 7_3:-39761909 Msa1103650:CDS
AGTTGAGTTTCAGACGCAGA+TGG 0.592347 7_3:-39761912 Msa1103650:CDS
ACGCAGATGGTGGAGATCGA+TGG 0.599170 7_3:-39761899 Msa1103650:CDS
TATCAGAGAAGTGAGCATAG+AGG 0.606671 7_3:-39753206 Msa1103650:CDS
CAGAGAAGTGAGCATAGAGG+AGG 0.611372 7_3:-39753203 Msa1103650:CDS
TCCCACCAACATTCTCGCAA+CGG 0.615034 7_3:+39753249 None:intergenic
AGAGAAGTGAGCATAGAGGA+GGG 0.616692 7_3:-39753202 Msa1103650:CDS
CTAATCGGCGACTCTGCCGT+AGG 0.635372 7_3:-39762001 Msa1103650:CDS
GAATTTGAAGAGTGTGTGTG+TGG 0.646827 7_3:+39762119 None:intergenic
TGAACCAGACCCATTAACCA+GGG 0.656644 7_3:+39753009 None:intergenic
ACCGTTGCGAGAATGTTGGT+GGG 0.661082 7_3:-39753250 Msa1103650:CDS
ACATTGAGGAGGAACAGAAG+AGG 0.666501 7_3:+39752828 None:intergenic
TAGCACCGTTGCGAGAATGT+TGG 0.709575 7_3:-39753254 Msa1103650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GCAAAAAAAAAAAAAAAAAA+AGG + chr7_3:39753501-39753520 None:intergenic 10.0%
!!! TTTCTTTTAAATTTTTCTTT+TGG - chr7_3:39753993-39754012 Msa1103650:intron 10.0%
!!! AACAAAAAAAATTGTTTTTA+TGG - chr7_3:39754082-39754101 Msa1103650:intron 10.0%
!! ATTCATTTAAATATTTCATA+AGG + chr7_3:39754282-39754301 None:intergenic 10.0%
!! CCTAAAATAATAATAATAAT+GGG + chr7_3:39754768-39754787 None:intergenic 10.0%
!!! CCATTATTATTATTATTTTA+GGG - chr7_3:39754766-39754785 Msa1103650:intron 10.0%
!!! ATATTGTATGATTATTTTTA+GGG + chr7_3:39754814-39754833 None:intergenic 10.0%
!!! TATATTGTATGATTATTTTT+AGG + chr7_3:39754815-39754834 None:intergenic 10.0%
!!! TTTGACTTATATTAAAATTA+AGG - chr7_3:39755073-39755092 Msa1103650:intron 10.0%
!! TTGACTTATATTAAAATTAA+GGG - chr7_3:39755074-39755093 Msa1103650:intron 10.0%
!!! AGATTTTAAAATAAGTTTAT+AGG - chr7_3:39755106-39755125 Msa1103650:intron 10.0%
!!! ATTGTTAATTTTTTTTTCTT+TGG + chr7_3:39755208-39755227 None:intergenic 10.0%
!! AGAAAAAAAAATTAACAATA+CGG - chr7_3:39755209-39755228 Msa1103650:intron 10.0%
!! TAATAACAACAATATTTAAA+AGG - chr7_3:39755256-39755275 Msa1103650:intron 10.0%
!!! ATCATGTTTTTTTTTAAATA+TGG - chr7_3:39755314-39755333 Msa1103650:intron 10.0%
!! TTTATAATATGCTAAAATTT+AGG + chr7_3:39755662-39755681 None:intergenic 10.0%
!! ATTTATAAAATTAGACATAA+AGG + chr7_3:39755954-39755973 None:intergenic 10.0%
!! TTTATAAATAAAAATGTACA+TGG - chr7_3:39755965-39755984 Msa1103650:intron 10.0%
!! TTATAAATAAAAATGTACAT+GGG - chr7_3:39755966-39755985 Msa1103650:intron 10.0%
!!! ATTTCAAATTCTTTTATTTT+TGG + chr7_3:39757108-39757127 None:intergenic 10.0%
!!! AAAAAAATTCATCATAATTT+TGG - chr7_3:39758276-39758295 Msa1103650:intron 10.0%
!!! TAATTAATTTTTTATTCAAG+AGG - chr7_3:39759021-39759040 Msa1103650:intron 10.0%
!! ATATTAATTAAGGAATTAAT+TGG + chr7_3:39759472-39759491 None:intergenic 10.0%
!! TGTATGTATTATTTAAATAA+GGG + chr7_3:39760733-39760752 None:intergenic 10.0%
!! ATGTATGTATTATTTAAATA+AGG + chr7_3:39760734-39760753 None:intergenic 10.0%
!!! TATAATTTTTTTTTCTCTTT+GGG - chr7_3:39761852-39761871 Msa1103650:CDS 10.0%
!! TCGTAAAAAAAAAAAAGTAA+TGG + chr7_3:39753047-39753066 None:intergenic 15.0%
!! ATTATAAGCACTTAAATTAT+AGG + chr7_3:39753165-39753184 None:intergenic 15.0%
!! GTTTATTGTTTATGTTAAAA+TGG - chr7_3:39753357-39753376 Msa1103650:intron 15.0%
!!! GGTTTTTTTTTTTTTTTTTG+CGG - chr7_3:39753407-39753426 Msa1103650:intron 15.0%
!! TCAAAAAAAAAAAGATTAGT+CGG - chr7_3:39753521-39753540 Msa1103650:intron 15.0%
!! TTATCCAAATAAAAAAAGAA+GGG - chr7_3:39753573-39753592 Msa1103650:intron 15.0%
!!! TGAAAACAATGATTTTTTAT+GGG + chr7_3:39753884-39753903 None:intergenic 15.0%
!!! TTGAAAACAATGATTTTTTA+TGG + chr7_3:39753885-39753904 None:intergenic 15.0%
!! GACAAAGTTAATTAATTAAT+GGG - chr7_3:39754178-39754197 Msa1103650:intron 15.0%
!!! GTATTCATTCTTTTTTTTTA+AGG - chr7_3:39754400-39754419 Msa1103650:intron 15.0%
!!! CAATTTTAATTTTTCAAGTT+TGG + chr7_3:39754553-39754572 None:intergenic 15.0%
!!! AATATGAAAATCACTTATTT+TGG - chr7_3:39754613-39754632 Msa1103650:intron 15.0%
!!! TTTTTTTTTTGTTAACCTTA+TGG + chr7_3:39754727-39754746 None:intergenic 15.0%
!!! AATAATAATAATGGGTATTT+AGG + chr7_3:39754760-39754779 None:intergenic 15.0%
!!! CCCATTATTATTATTATTTT+AGG - chr7_3:39754765-39754784 Msa1103650:intron 15.0%
!! CCCTAAAATAATAATAATAA+TGG + chr7_3:39754769-39754788 None:intergenic 15.0%
!!! ATAAATTTGCTTCTATTTAA+TGG - chr7_3:39754960-39754979 Msa1103650:intron 15.0%
!!! TAAACTTTAAAATTAGTTAC+AGG - chr7_3:39755164-39755183 Msa1103650:intron 15.0%
!!! AAACTTTAAAATTAGTTACA+GGG - chr7_3:39755165-39755184 Msa1103650:intron 15.0%
!!! TATTGCTCAAATTTAATTTT+GGG + chr7_3:39755797-39755816 None:intergenic 15.0%
!!! TTATTGCTCAAATTTAATTT+TGG + chr7_3:39755798-39755817 None:intergenic 15.0%
!! TTGTAGAAAATTAGTAAAAT+TGG + chr7_3:39755839-39755858 None:intergenic 15.0%
!!! AAAAGACAAATTTTAGATTT+AGG + chr7_3:39756168-39756187 None:intergenic 15.0%
!!! TTTTACTGAAAAAAGTTTAT+TGG - chr7_3:39756854-39756873 Msa1103650:intron 15.0%
!!! TTATACATTTTTAAATGATG+TGG + chr7_3:39757019-39757038 None:intergenic 15.0%
!!! TTTTCAAATTCATTTACTTT+TGG + chr7_3:39757323-39757342 None:intergenic 15.0%
!!! TAATTTTATAGATTTGTTGA+AGG - chr7_3:39757935-39757954 Msa1103650:intron 15.0%
!!! TTTAATTAAGTCTAATTTGT+TGG + chr7_3:39757989-39758008 None:intergenic 15.0%
!!! ATTCCTTTAATTTTGATATT+AGG + chr7_3:39758100-39758119 None:intergenic 15.0%
!!! TGAATTTTTTTGTTAGTTTT+TGG + chr7_3:39758267-39758286 None:intergenic 15.0%
!!! TAGAATTTTTTCATATTTGA+GGG + chr7_3:39758804-39758823 None:intergenic 15.0%
!!! CTTAAGTTATACATATATTT+TGG - chr7_3:39759147-39759166 Msa1103650:intron 15.0%
!! ATAATTTATTACTAGGTATT+TGG + chr7_3:39759872-39759891 None:intergenic 15.0%
!! CTATATGATAATTTATTACT+AGG + chr7_3:39759879-39759898 None:intergenic 15.0%
!!! TCTTTTATTTGATTAGAATT+AGG - chr7_3:39759938-39759957 Msa1103650:intron 15.0%
!!! TTAAATGATTTGCAAATTTT+AGG + chr7_3:39760048-39760067 None:intergenic 15.0%
!! AAATTTGCAAATCATTTAAA+AGG - chr7_3:39760049-39760068 Msa1103650:intron 15.0%
!! AATTTGCAAATCATTTAAAA+GGG - chr7_3:39760050-39760069 Msa1103650:intron 15.0%
!! AGGTTATTATATTTGATAAA+CGG - chr7_3:39760078-39760097 Msa1103650:intron 15.0%
!! TGATATTATTGTAAATTTCA+CGG + chr7_3:39761657-39761676 None:intergenic 15.0%
!!! CTATAATTTTTTTTTCTCTT+TGG - chr7_3:39761851-39761870 Msa1103650:CDS 15.0%
!! AAAATATTGTTATAGTTTCA+TGG + chr7_3:39762014-39762033 None:intergenic 15.0%
!!! TATTTTCATGATAGAAATTA+TGG - chr7_3:39762028-39762047 Msa1103650:CDS 15.0%
!!! TGATTTTTTTTGTGGTTTTT+TGG + chr7_3:39752663-39752682 None:intergenic 20.0%
!!! TTGTTGTTTATGATATTAGT+AGG - chr7_3:39752959-39752978 Msa1103650:exon 20.0%
!! TTAAGTGCTTATAATTAGTA+TGG - chr7_3:39753170-39753189 Msa1103650:CDS 20.0%
!!! GTAAAAAGTGCTTATAATAA+GGG - chr7_3:39753379-39753398 Msa1103650:intron 20.0%
!!! TTTTTTTTTTTTTTTGCGGA+TGG - chr7_3:39753411-39753430 Msa1103650:intron 20.0%
!! TGAAATTAATTCGACATAAA+AGG + chr7_3:39753466-39753485 None:intergenic 20.0%
!! GTTATCCAAATAAAAAAAGA+AGG - chr7_3:39753572-39753591 Msa1103650:intron 20.0%
!!! ATGTCATTATCAATTTTGAT+TGG + chr7_3:39753800-39753819 None:intergenic 20.0%
!! AACAAATTGTCTCTATATAT+AGG + chr7_3:39753834-39753853 None:intergenic 20.0%
!! AAATAAAAGAAAAGAGAATG+GGG + chr7_3:39753908-39753927 None:intergenic 20.0%
!! CAAATAAAAGAAAAGAGAAT+GGG + chr7_3:39753909-39753928 None:intergenic 20.0%
!! ACAAATAAAAGAAAAGAGAA+TGG + chr7_3:39753910-39753929 None:intergenic 20.0%
!!! GTCTGTTTTAAATAAATCAA+AGG + chr7_3:39754110-39754129 None:intergenic 20.0%
!! AAAACAAATAGATATTTGAG+TGG - chr7_3:39754156-39754175 Msa1103650:intron 20.0%
!! GGACAAAGTTAATTAATTAA+TGG - chr7_3:39754177-39754196 Msa1103650:intron 20.0%
!! TAAATATTTCATAAGGATGA+AGG + chr7_3:39754275-39754294 None:intergenic 20.0%
!! AAAGAATGAATACAAAGATA+TGG + chr7_3:39754393-39754412 None:intergenic 20.0%
!! TTAAAACTTATAATCGCAAA+TGG - chr7_3:39754439-39754458 Msa1103650:intron 20.0%
!!! TCCATCAAATGATTTTTTTT+GGG - chr7_3:39754654-39754673 Msa1103650:intron 20.0%
!! ACAATATAATTTCCACTAAA+CGG - chr7_3:39754837-39754856 Msa1103650:intron 20.0%
!!! TCATCTTTTAAAAAAGGAAT+AGG + chr7_3:39754917-39754936 None:intergenic 20.0%
!!! GGAATATCATCTTTTAAAAA+AGG + chr7_3:39754923-39754942 None:intergenic 20.0%
!! TTTAAAAGATGATATTCCAT+AGG - chr7_3:39754925-39754944 Msa1103650:intron 20.0%
!!! CTTATTTTAAAATCTCAGTT+TGG + chr7_3:39755101-39755120 None:intergenic 20.0%
!!! ATTGACCAATTTTAAAGTTA+TGG - chr7_3:39755133-39755152 Msa1103650:intron 20.0%
!!! TTGACCAATTTTAAAGTTAT+GGG - chr7_3:39755134-39755153 Msa1103650:intron 20.0%
!!! AAGGTAATTGATTTAACTTA+TGG - chr7_3:39755438-39755457 Msa1103650:intron 20.0%
!! ATAAAATGTTTAGATGAGTT+AGG + chr7_3:39755564-39755583 None:intergenic 20.0%
!!! ATCAATCGAAAACATTTTTT+AGG - chr7_3:39755691-39755710 Msa1103650:intron 20.0%
!! GGAAAGATTATTCAATAAAA+TGG - chr7_3:39755712-39755731 Msa1103650:intron 20.0%
!! AATTAAATTTGAGCAATAAC+CGG - chr7_3:39755799-39755818 Msa1103650:intron 20.0%
!! ATTGGAATTTAAAAAATCAC+CGG + chr7_3:39755821-39755840 None:intergenic 20.0%
!! GTTTAATTGTTCTTGATTAT+TGG - chr7_3:39756876-39756895 Msa1103650:intron 20.0%
!!! AATTTTATGAGTTTCTTGAA+AGG - chr7_3:39756937-39756956 Msa1103650:intron 20.0%
!!! ATTTTATGAGTTTCTTGAAA+GGG - chr7_3:39756938-39756957 Msa1103650:intron 20.0%
!!! TTTAATTGAGTCTAATGTTT+TGG + chr7_3:39756990-39757009 None:intergenic 20.0%
!!! ATTCTTTTATTTTTGGTCTT+TGG + chr7_3:39757101-39757120 None:intergenic 20.0%
!!! TACAAGTTGAATGAAATAAA+TGG - chr7_3:39757130-39757149 Msa1103650:intron 20.0%
!!! AATGACATAACACTTTTTTT+TGG + chr7_3:39757220-39757239 None:intergenic 20.0%
!! AATCAGTTTATCATAATGTT+AGG - chr7_3:39757447-39757466 Msa1103650:intron 20.0%
!!! CTTTAATTTTGATATTAGGT+GGG + chr7_3:39758096-39758115 None:intergenic 20.0%
!! TTAACATAAGAGAAATGATA+AGG - chr7_3:39758165-39758184 Msa1103650:intron 20.0%
!! TAACATAAGAGAAATGATAA+GGG - chr7_3:39758166-39758185 Msa1103650:intron 20.0%
!! AATGATAAGGGAAAAAATTA+AGG - chr7_3:39758178-39758197 Msa1103650:intron 20.0%
!!! ATGCTATAAGATATTTTGTA+AGG + chr7_3:39758378-39758397 None:intergenic 20.0%
!! ACTTAATGCCTTAAAATATT+GGG + chr7_3:39758689-39758708 None:intergenic 20.0%
!!! CTAGAATTTTTTCATATTTG+AGG + chr7_3:39758805-39758824 None:intergenic 20.0%
!!! TGTTGTATCATTTAAAATGT+TGG - chr7_3:39759359-39759378 Msa1103650:intron 20.0%
!! ATGTCAAAGCATATTAATTA+AGG + chr7_3:39759482-39759501 None:intergenic 20.0%
!!! AATAGTTGGCAAATTTTAAT+TGG + chr7_3:39759711-39759730 None:intergenic 20.0%
!!! AGAATTTTTCAAGAAATAGT+TGG + chr7_3:39759725-39759744 None:intergenic 20.0%
!! AGGATAAATACATTTGAATT+TGG - chr7_3:39759958-39759977 Msa1103650:intron 20.0%
!! TAAATACATTTGAATTTGGA+AGG - chr7_3:39759962-39759981 Msa1103650:intron 20.0%
!! TATGCTAAATTTGATTAAGT+AGG + chr7_3:39760537-39760556 None:intergenic 20.0%
!! CATTATTATATGAGTCAAAT+AGG - chr7_3:39760590-39760609 Msa1103650:intron 20.0%
!!! AGGTGTTTGTTTTTAAAAAA+AGG + chr7_3:39760706-39760725 None:intergenic 20.0%
!! ATGTATTATTTAAATAAGGG+AGG + chr7_3:39760730-39760749 None:intergenic 20.0%
!! TTCCTCTATATTGTAATATA+GGG + chr7_3:39760759-39760778 None:intergenic 20.0%
!! ATTCCTCTATATTGTAATAT+AGG + chr7_3:39760760-39760779 None:intergenic 20.0%
!! TATATTACAATATAGAGGAA+TGG - chr7_3:39760759-39760778 Msa1103650:intron 20.0%
!!! TCAAATTAATCCTTTTTTGT+TGG - chr7_3:39760914-39760933 Msa1103650:intron 20.0%
!! AGTATCAAATAAGTATAACT+TGG + chr7_3:39761116-39761135 None:intergenic 20.0%
!!! AGAGATAAACTTTTAAAACT+TGG - chr7_3:39761344-39761363 Msa1103650:intron 20.0%
!! TTAACTTTGAATTGATACTT+TGG - chr7_3:39761804-39761823 Msa1103650:CDS 20.0%
!! AAGCCATAAAATTAACTTAT+TGG - chr7_3:39762153-39762172 Msa1103650:five_prime_UTR 20.0%
!!! TAGCCAATAAGTTAATTTTA+TGG + chr7_3:39762159-39762178 None:intergenic 20.0%
!!! CATTGTTGTGATTTTTTTTG+TGG + chr7_3:39752671-39752690 None:intergenic 25.0%
! TCAAATTCAAAAGCAACAAT+TGG - chr7_3:39752808-39752827 Msa1103650:three_prime_UTR 25.0%
! GCATAATTGAGTGTAATTAT+AGG - chr7_3:39753125-39753144 Msa1103650:CDS 25.0%
!!! ACTTTTTTGAGTTTGATTTG+TGG - chr7_3:39753211-39753230 Msa1103650:CDS 25.0%
!!! GACTAATTTGCCTATTTTTA+GGG - chr7_3:39753233-39753252 Msa1103650:CDS 25.0%
! AAGAACATATCCCTAAAAAT+AGG + chr7_3:39753246-39753265 None:intergenic 25.0%
! ATGTTCTTGAATGTTACTAT+TGG - chr7_3:39753258-39753277 Msa1103650:CDS 25.0%
!!! GGTAAAAAGTGCTTATAATA+AGG - chr7_3:39753378-39753397 Msa1103650:intron 25.0%
!!! CAAACCCTTCTTTTTTTATT+TGG + chr7_3:39753580-39753599 None:intergenic 25.0%
! AATAAAAAAAGAAGGGTTTG+AGG - chr7_3:39753580-39753599 Msa1103650:intron 25.0%
!!! GATTCAATATCCATTTTGAT+TGG + chr7_3:39753721-39753740 None:intergenic 25.0%
!! TTTTTGTTAGCCAATCAAAA+TGG - chr7_3:39753747-39753766 Msa1103650:intron 25.0%
!!! AAACAATGATTTTTTATGGG+AGG + chr7_3:39753881-39753900 None:intergenic 25.0%
! TAGAAACATGAATAGAGATT+CGG + chr7_3:39754047-39754066 None:intergenic 25.0%
! ATTGTGGAAAGGATTAAATA+TGG + chr7_3:39754478-39754497 None:intergenic 25.0%
!!! CTCCATCAAATGATTTTTTT+TGG - chr7_3:39754653-39754672 Msa1103650:intron 25.0%
! TCCCAAAAAAAATCATTTGA+TGG + chr7_3:39754658-39754677 None:intergenic 25.0%
! TTATATGTAGTACAAACCTA+TGG + chr7_3:39754944-39754963 None:intergenic 25.0%
! GATACTAACAAAGTTTAATC+TGG - chr7_3:39754999-39755018 Msa1103650:intron 25.0%
! TTAATCTGGTTATACGATAA+AGG - chr7_3:39755013-39755032 Msa1103650:intron 25.0%
!!! TAGTCCCATAACTTTAAAAT+TGG + chr7_3:39755141-39755160 None:intergenic 25.0%
! TACTAATAGTAGCATTACAA+AGG - chr7_3:39755378-39755397 Msa1103650:intron 25.0%
! ACATGCATTATGCTATTAAA+AGG + chr7_3:39755901-39755920 None:intergenic 25.0%
! ACAAACATGTTCAAAAATGT+GGG - chr7_3:39756529-39756548 Msa1103650:intron 25.0%
! TAAGAGAAAAAGATATGCAA+TGG - chr7_3:39756664-39756683 Msa1103650:intron 25.0%
! AAGAGAAAAAGATATGCAAT+GGG - chr7_3:39756665-39756684 Msa1103650:intron 25.0%
!!! ACACATTTTTCAAAAGTTGT+TGG - chr7_3:39756913-39756932 Msa1103650:intron 25.0%
!!! TACATAAAAGTGCTTTTCTA+AGG - chr7_3:39757065-39757084 Msa1103650:intron 25.0%
!!! TTTTATTTTTGGTCTTTGGT+AGG + chr7_3:39757097-39757116 None:intergenic 25.0%
!!! ATTTACTTTTGGCATTTGAT+GGG + chr7_3:39757312-39757331 None:intergenic 25.0%
! TGAGTTAACATTCTACATAT+TGG + chr7_3:39757625-39757644 None:intergenic 25.0%
! ACACAACATGTTCAAAAATT+TGG - chr7_3:39757732-39757751 Msa1103650:intron 25.0%
! CACAACATGTTCAAAAATTT+GGG - chr7_3:39757733-39757752 Msa1103650:intron 25.0%
! TATTATTCACTACTCTCTTA+TGG + chr7_3:39757904-39757923 None:intergenic 25.0%
!!! CCTTTAATTTTGATATTAGG+TGG + chr7_3:39758097-39758116 None:intergenic 25.0%
! CCACCTAATATCAAAATTAA+AGG - chr7_3:39758094-39758113 Msa1103650:intron 25.0%
!!! ATCATAATTTTGGAAATACC+AGG - chr7_3:39758286-39758305 Msa1103650:intron 25.0%
!!! TCATAATTTTGGAAATACCA+GGG - chr7_3:39758287-39758306 Msa1103650:intron 25.0%
!! TAAGATATTTTGTAAGGATG+TGG + chr7_3:39758372-39758391 None:intergenic 25.0%
! AATTCCTTAAAGCTCTATAT+TGG + chr7_3:39758452-39758471 None:intergenic 25.0%
! TAAGGAATTAACTAGGTATA+TGG - chr7_3:39758463-39758482 Msa1103650:intron 25.0%
! AAGGAATTAACTAGGTATAT+GGG - chr7_3:39758464-39758483 Msa1103650:intron 25.0%
! TAAAATATTGGGTGAAAATG+TGG + chr7_3:39758678-39758697 None:intergenic 25.0%
!! CATTTTCACCCAATATTTTA+AGG - chr7_3:39758678-39758697 Msa1103650:intron 25.0%
! CACTTAATGCCTTAAAATAT+TGG + chr7_3:39758690-39758709 None:intergenic 25.0%
! GAAATTGTAAACAACTAGTA+TGG + chr7_3:39758848-39758867 None:intergenic 25.0%
! ACAATGCATTGAAATATGTA+GGG + chr7_3:39758915-39758934 None:intergenic 25.0%
! TACAATGCATTGAAATATGT+AGG + chr7_3:39758916-39758935 None:intergenic 25.0%
! GATTGTACACCAAAAAAATA+TGG - chr7_3:39759798-39759817 Msa1103650:intron 25.0%
!!! ACTATCTGACCATATTTTTT+TGG + chr7_3:39759810-39759829 None:intergenic 25.0%
! TGTGCATATATTCTTAACTA+TGG - chr7_3:39760356-39760375 Msa1103650:intron 25.0%
! AGAACATAAGATAAAGCAAA+TGG + chr7_3:39760407-39760426 None:intergenic 25.0%
!! TTTTTATCTGACACTTTACT+CGG - chr7_3:39760427-39760446 Msa1103650:intron 25.0%
! ATGTTTGGAAGACTAAATTA+AGG + chr7_3:39760622-39760641 None:intergenic 25.0%
! ATTATTTAAATAAGGGAGGT+AGG + chr7_3:39760726-39760745 None:intergenic 25.0%
! TCCTCTATATTGTAATATAG+GGG + chr7_3:39760758-39760777 None:intergenic 25.0%
! TAGAGGAATGGATATAATTA+AGG - chr7_3:39760771-39760790 Msa1103650:intron 25.0%
! AGAGGAATGGATATAATTAA+GGG - chr7_3:39760772-39760791 Msa1103650:intron 25.0%
!! TAATATCTTTTGCAAAAGTG+AGG - chr7_3:39760800-39760819 Msa1103650:intron 25.0%
!! TGTCAGTTAAACATGTTTTA+AGG - chr7_3:39760831-39760850 Msa1103650:intron 25.0%
!! CTCTATTGATAACATAAAGA+GGG + chr7_3:39760871-39760890 None:intergenic 25.0%
!! ACTCTATTGATAACATAAAG+AGG + chr7_3:39760872-39760891 None:intergenic 25.0%
! ATTTCTTAGTCCAACAAAAA+AGG + chr7_3:39760927-39760946 None:intergenic 25.0%
! ATCAAATTAGTCCTGATTAA+GGG + chr7_3:39760963-39760982 None:intergenic 25.0%
!! ATGGTATTTTGTATGATAGA+TGG - chr7_3:39760981-39761000 Msa1103650:intron 25.0%
! CATAAGAACTAAAAACATTG+AGG + chr7_3:39761932-39761951 None:intergenic 25.0%
!! TTTTCTTCTTTCAGAATGTA+TGG + chr7_3:39761963-39761982 None:intergenic 25.0%
!!! TAGAAATTATGGAGTTTTAG+AGG - chr7_3:39762039-39762058 Msa1103650:CDS 25.0%
!!! AGTTTTAGAGGCAATATTTT+TGG - chr7_3:39762051-39762070 Msa1103650:CDS 25.0%
! AATACTATATTCTCATTTGC+TGG - chr7_3:39762102-39762121 Msa1103650:five_prime_UTR 25.0%
!!! CGATCTTAAGTTTTAAACAT+TGG + chr7_3:39762183-39762202 None:intergenic 25.0%
! ACGATTATCTTTTTGTGTTG+GGG + chr7_3:39752582-39752601 None:intergenic 30.0%
! GACGATTATCTTTTTGTGTT+GGG + chr7_3:39752583-39752602 None:intergenic 30.0%
! AGACGATTATCTTTTTGTGT+TGG + chr7_3:39752584-39752603 None:intergenic 30.0%
GTTTATGATATTAGTAGGAG+AGG - chr7_3:39752964-39752983 Msa1103650:exon 30.0%
AGCACTTAAATTATAGGTGT+CGG + chr7_3:39753159-39753178 None:intergenic 30.0%
!! GGACTAATTTGCCTATTTTT+AGG - chr7_3:39753232-39753251 Msa1103650:CDS 30.0%
ATCGCTTGTACTTACATAAA+TGG - chr7_3:39753550-39753569 Msa1103650:intron 30.0%
TTTCTGTCAACCAATCAAAA+TGG - chr7_3:39753708-39753727 Msa1103650:intron 30.0%
!! AGTCATTGATCCATTTTGAT+TGG + chr7_3:39753760-39753779 None:intergenic 30.0%
AAACATTATACACTAACGCA+AGG + chr7_3:39754230-39754249 None:intergenic 30.0%
!!! CTCAAATTTTAGTTACGTCA+CGG - chr7_3:39754681-39754700 Msa1103650:intron 30.0%
AAGTAATAAAGACCGTTTAG+TGG + chr7_3:39754852-39754871 None:intergenic 30.0%
AATAGTAGCATTACAAAGGA+AGG - chr7_3:39755382-39755401 Msa1103650:intron 30.0%
! AAAGAATTGACTTAACTGCA+AGG - chr7_3:39755419-39755438 Msa1103650:intron 30.0%
!!! ACGAATGTTGATTTTGTGAA+AGG - chr7_3:39756105-39756124 Msa1103650:intron 30.0%
TAGATTTAGGCTAGTATCAT+TGG + chr7_3:39756155-39756174 None:intergenic 30.0%
TGAGTTAACGTTCTACATAT+CGG + chr7_3:39756421-39756440 None:intergenic 30.0%
CACAAACATGTTCAAAAATG+TGG - chr7_3:39756528-39756547 Msa1103650:intron 30.0%
AAGCAAAGTGAATACGAAAA+AGG - chr7_3:39756619-39756638 Msa1103650:intron 30.0%
AAGGAAAACTTTGGATTTAG+AGG + chr7_3:39756711-39756730 None:intergenic 30.0%
AGTGGTAAAAAGGAAAACTT+TGG + chr7_3:39756720-39756739 None:intergenic 30.0%
GGTTTAATCTAGTGGTAAAA+AGG + chr7_3:39756730-39756749 None:intergenic 30.0%
!! TTGTGATTTTTCGACTCTAA+GGG + chr7_3:39756751-39756770 None:intergenic 30.0%
!! ATTGTGATTTTTCGACTCTA+AGG + chr7_3:39756752-39756771 None:intergenic 30.0%
TAAAAAACCAAGATGAGAGA+TGG + chr7_3:39756839-39756858 None:intergenic 30.0%
!! CATTTACTTTTGGCATTTGA+TGG + chr7_3:39757313-39757332 None:intergenic 30.0%
ATGATTATCCAACCTAATGT+AGG + chr7_3:39757486-39757505 None:intergenic 30.0%
!! TAGTGTCAATCTAACTTGTT+TGG + chr7_3:39757525-39757544 None:intergenic 30.0%
TCACACAGTTGGTTAAAATA+TGG + chr7_3:39757663-39757682 None:intergenic 30.0%
GTGTTCTTAATTATGTGACA+CGG - chr7_3:39757689-39757708 Msa1103650:intron 30.0%
!! TAGATTTGTTGAAGGAATTG+AGG - chr7_3:39757943-39757962 Msa1103650:intron 30.0%
! TACGGAATATATTGAGTTGT+TGG - chr7_3:39758226-39758245 Msa1103650:intron 30.0%
! ACGGAATATATTGAGTTGTT+GGG - chr7_3:39758227-39758246 Msa1103650:intron 30.0%
!! AGAGCTTTAAGGAATTAACT+AGG - chr7_3:39758456-39758475 Msa1103650:intron 30.0%
TCTATTCGATTCAACTTTGT+GGG + chr7_3:39758629-39758648 None:intergenic 30.0%
! TGGTATCATTCTTATTTGTG+TGG + chr7_3:39758658-39758677 None:intergenic 30.0%
TATAGTCTAACATTGAGTAG+AGG + chr7_3:39758751-39758770 None:intergenic 30.0%
ATTCCACTTATTCACTCTAA+GGG + chr7_3:39758872-39758891 None:intergenic 30.0%
CAATGCATTGAAATATGTAG+GGG + chr7_3:39758914-39758933 None:intergenic 30.0%
! CTTTTATTCAAGAGTAGACT+AGG - chr7_3:39758977-39758996 Msa1103650:intron 30.0%
ATGGAATAAAACTCTGTGTA+AGG - chr7_3:39759080-39759099 Msa1103650:intron 30.0%
!! GGACATTGTTCATTTTTGTA+AGG - chr7_3:39759168-39759187 Msa1103650:intron 30.0%
!!! TTTTTTGTGTGTTAACCCTA+GGG + chr7_3:39759329-39759348 None:intergenic 30.0%
!!! TTTTTTTGTGTGTTAACCCT+AGG + chr7_3:39759330-39759349 None:intergenic 30.0%
! TAGCATTTTCCATGACATTA+TGG - chr7_3:39759767-39759786 Msa1103650:intron 30.0%
!! GTATTTGGAAGTGCTTATAT+AGG + chr7_3:39759857-39759876 None:intergenic 30.0%
TGTTTCCTTCATGTTATGAA+TGG - chr7_3:39760000-39760019 Msa1103650:intron 30.0%
GTTTCCTTCATGTTATGAAT+GGG - chr7_3:39760001-39760020 Msa1103650:intron 30.0%
AATCATTTAAAAGGGACACT+AGG - chr7_3:39760058-39760077 Msa1103650:intron 30.0%
ACATACATCTAGCAAAAACA+GGG + chr7_3:39760111-39760130 None:intergenic 30.0%
TACATACATCTAGCAAAAAC+AGG + chr7_3:39760112-39760131 None:intergenic 30.0%
! GGTAGATGAGAGATTTTTAT+GGG - chr7_3:39760182-39760201 Msa1103650:intron 30.0%
TGTATTGTGAATTGTGAAGA+TGG - chr7_3:39760323-39760342 Msa1103650:intron 30.0%
AATGATGACACTTGTATGTT+TGG + chr7_3:39760637-39760656 None:intergenic 30.0%
ACCCCTATATTACAATATAG+AGG - chr7_3:39760754-39760773 Msa1103650:intron 30.0%
GAGGAATGGATATAATTAAG+GGG - chr7_3:39760773-39760792 Msa1103650:intron 30.0%
! TTTGATGATACTATGCATGA+TGG + chr7_3:39760899-39760918 None:intergenic 30.0%
CATCAAATTAGTCCTGATTA+AGG + chr7_3:39760964-39760983 None:intergenic 30.0%
CTTAATCAGGACTAATTTGA+TGG - chr7_3:39760962-39760981 Msa1103650:intron 30.0%
ATAGATGGAGTAAAATGATC+AGG - chr7_3:39760996-39761015 Msa1103650:intron 30.0%
ATAGAAGTCACAGAAATGTT+TGG - chr7_3:39761029-39761048 Msa1103650:intron 30.0%
TAATGCAAGTATCATCACTT+AGG + chr7_3:39761059-39761078 None:intergenic 30.0%
ACTTATTTGATACTTGTGAC+TGG - chr7_3:39761122-39761141 Msa1103650:intron 30.0%
! AGAAGAAGGTTTGTTCTTTA+TGG - chr7_3:39761579-39761598 Msa1103650:intron 30.0%
! CAATTCAGCTTTATAGGAAT+CGG + chr7_3:39761698-39761717 None:intergenic 30.0%
AAGAACTAAAAACATTGAGG+AGG + chr7_3:39761929-39761948 None:intergenic 30.0%
!! GGCTTATTTGTTATCGTATT+TGG + chr7_3:39762138-39762157 None:intergenic 30.0%
! TCTTTTTGTGTTGGGGTTTT+GGG + chr7_3:39752575-39752594 None:intergenic 35.0%
! ATCTTTTTGTGTTGGGGTTT+TGG + chr7_3:39752576-39752595 None:intergenic 35.0%
!!! TTGTGGTTTTTTGGATGAGA+AGG + chr7_3:39752654-39752673 None:intergenic 35.0%
TCAGAAGAAAACAACGAAGA+AGG - chr7_3:39752691-39752710 Msa1103650:three_prime_UTR 35.0%
CTCTTCAAAATCGTCCTAAT+CGG - chr7_3:39752727-39752746 Msa1103650:three_prime_UTR 35.0%
GTTACTTCTGCTTATTATCG+TGG - chr7_3:39752922-39752941 Msa1103650:three_prime_UTR 35.0%
!!! GAACTTTTGAGAGTATCAAG+AGG - chr7_3:39752986-39753005 Msa1103650:CDS 35.0%
CGGATAGTAATTTGAGAAAG+TGG - chr7_3:39753103-39753122 Msa1103650:CDS 35.0%
GTGCTTATAATAAGGGATTG+TGG - chr7_3:39753386-39753405 Msa1103650:intron 35.0%
! TGAGTTCTCTTTTCCTAATC+GGG + chr7_3:39753443-39753462 None:intergenic 35.0%
! GTGAGTTCTCTTTTCCTAAT+CGG + chr7_3:39753444-39753463 None:intergenic 35.0%
ACATGTACTATCGCTTATAG+AGG + chr7_3:39753655-39753674 None:intergenic 35.0%
TCTATAAGCGATAGTACATG+TGG - chr7_3:39753654-39753673 Msa1103650:intron 35.0%
ATGGAACGAATATTGTGGAA+AGG + chr7_3:39754489-39754508 None:intergenic 35.0%
!! TTGTTTTTCCGTAGAAGTCA+AGG + chr7_3:39754512-39754531 None:intergenic 35.0%
! CTTTGGCTTAAATGTCACTT+TGG + chr7_3:39755191-39755210 None:intergenic 35.0%
TGTTTAGATGAGTTAGGCTT+CGG + chr7_3:39755558-39755577 None:intergenic 35.0%
! CATTGCACTAACGATTTTTG+AGG - chr7_3:39756005-39756024 Msa1103650:intron 35.0%
! TTGTGATTTTCCAACTCTCA+GGG + chr7_3:39756206-39756225 None:intergenic 35.0%
! ATTGTGATTTTCCAACTCTC+AGG + chr7_3:39756207-39756226 None:intergenic 35.0%
CTGAGAGTTTATCATAATGC+CGG - chr7_3:39756242-39756261 Msa1103650:intron 35.0%
TGAGAGTTTATCATAATGCC+GGG - chr7_3:39756243-39756262 Msa1103650:intron 35.0%
TGAGATTACCCATATGTCTA+GGG + chr7_3:39756367-39756386 None:intergenic 35.0%
ATGAGATTACCCATATGTCT+AGG + chr7_3:39756368-39756387 None:intergenic 35.0%
!! TGTTCAAAAATGTGGGTTAG+TGG - chr7_3:39756536-39756555 Msa1103650:intron 35.0%
TATCCCTTCTCATGAAAGAA+AGG + chr7_3:39756588-39756607 None:intergenic 35.0%
! ACTCTAAGGGTTTAATCTAG+TGG + chr7_3:39756738-39756757 None:intergenic 35.0%
TGGTATGAAAGAGAACAACA+TGG - chr7_3:39757150-39757169 Msa1103650:intron 35.0%
CGTCTTCACAAAAAACCTTA+AGG - chr7_3:39757545-39757564 Msa1103650:intron 35.0%
! ACAAAAAACCTTAAGGCACT+AGG - chr7_3:39757552-39757571 Msa1103650:intron 35.0%
AACACATGTAATCACACAGT+TGG + chr7_3:39757674-39757693 None:intergenic 35.0%
TTAATTATGTGACACGGTCA+TGG - chr7_3:39757695-39757714 Msa1103650:intron 35.0%
TATCTCTTCTCGTGAAAGAA+AGG + chr7_3:39757792-39757811 None:intergenic 35.0%
! GCTTTGTCTGTGAAAGTATA+CGG - chr7_3:39758208-39758227 Msa1103650:intron 35.0%
! CGGAATATATTGAGTTGTTG+GGG - chr7_3:39758228-39758247 Msa1103650:intron 35.0%
! GGAATATATTGAGTTGTTGG+GGG - chr7_3:39758229-39758248 Msa1103650:intron 35.0%
!!! TTTGTTAGTTTTTGGATCCC+CGG + chr7_3:39758259-39758278 None:intergenic 35.0%
!! TGTGGTTTCTAGTATACTGT+GGG + chr7_3:39758334-39758353 None:intergenic 35.0%
AAGCTCTATATTGGATGGAA+TGG + chr7_3:39758443-39758462 None:intergenic 35.0%
CCTTAAAGCTCTATATTGGA+TGG + chr7_3:39758448-39758467 None:intergenic 35.0%
CCATCCAATATAGAGCTTTA+AGG - chr7_3:39758445-39758464 Msa1103650:intron 35.0%
CTATTCGATTCAACTTTGTG+GGG + chr7_3:39758628-39758647 None:intergenic 35.0%
CTCTATTCGATTCAACTTTG+TGG + chr7_3:39758630-39758649 None:intergenic 35.0%
CAAAGTTGAATCGAATAGAG+AGG - chr7_3:39758630-39758649 Msa1103650:intron 35.0%
AACATTGAGTAGAGGATTGA+AGG + chr7_3:39758743-39758762 None:intergenic 35.0%
GATTCCACTTATTCACTCTA+AGG + chr7_3:39758873-39758892 None:intergenic 35.0%
AGAGTGAATAAGTGGAATCT+CGG - chr7_3:39758874-39758893 Msa1103650:intron 35.0%
TTACAACCAAAGAGGTTAAG+AGG - chr7_3:39759049-39759068 Msa1103650:intron 35.0%
TACAACCAAAGAGGTTAAGA+GGG - chr7_3:39759050-39759069 Msa1103650:intron 35.0%
ATAAAACTCTGTGTAAGGTG+TGG - chr7_3:39759085-39759104 Msa1103650:intron 35.0%
AGCAATCCTGATTTATCTCT+TGG - chr7_3:39759274-39759293 Msa1103650:intron 35.0%
ATTTATCTCTTGGTCGAACT+CGG - chr7_3:39759284-39759303 Msa1103650:intron 35.0%
! TTTTTGTGTGTTAACCCTAG+GGG + chr7_3:39759328-39759347 None:intergenic 35.0%
! TTCAATATAATGCGCTGATC+TGG - chr7_3:39759913-39759932 Msa1103650:intron 35.0%
AATTTGGAAGGATATCTACC+TGG - chr7_3:39759974-39759993 Msa1103650:intron 35.0%
AACATGAAGGAAACAAAACC+AGG + chr7_3:39759995-39760014 None:intergenic 35.0%
AACTCCCATTCATAACATGA+AGG + chr7_3:39760008-39760027 None:intergenic 35.0%
!! AACAGGTGTTGATGATCAAA+GGG + chr7_3:39760140-39760159 None:intergenic 35.0%
AGGAATGCTAATTAAGCAAC+AGG + chr7_3:39760157-39760176 None:intergenic 35.0%
CTTAATTAGCATTCCTGTGA+CGG - chr7_3:39760161-39760180 Msa1103650:intron 35.0%
! CGGTAGATGAGAGATTTTTA+TGG - chr7_3:39760181-39760200 Msa1103650:intron 35.0%
AATTCACAATACAGTCAGTC+AGG + chr7_3:39760316-39760335 None:intergenic 35.0%
GAATGGATATAATTAAGGGG+AGG - chr7_3:39760776-39760795 Msa1103650:intron 35.0%
TAAGTATAACTTGGTACTCG+AGG + chr7_3:39761107-39761126 None:intergenic 35.0%
TTGATACTTGTGACTGGAAA+TGG - chr7_3:39761128-39761147 Msa1103650:intron 35.0%
CGCTATTAGCGAAATTTCAA+AGG + chr7_3:39761376-39761395 None:intergenic 35.0%
AACTCTGTTACGAAACTGTA+TGG + chr7_3:39761437-39761456 None:intergenic 35.0%
! CAGTTTCGTAACAGAGTTTT+TGG - chr7_3:39761439-39761458 Msa1103650:intron 35.0%
! AATCGGAGTTTAAGACTTTG+CGG + chr7_3:39761681-39761700 None:intergenic 35.0%
! CACAGACAATTCAGCTTTAT+AGG + chr7_3:39761704-39761723 None:intergenic 35.0%
AAAAGCTCATCAAGAACAAC+AGG + chr7_3:39761779-39761798 None:intergenic 35.0%
! TTTCCCTAGCTACTATTTCT+TGG - chr7_3:39761879-39761898 Msa1103650:CDS 35.0%
ATGCCAAGAAATAGTAGCTA+GGG + chr7_3:39761885-39761904 None:intergenic 35.0%
AATGCCAAGAAATAGTAGCT+AGG + chr7_3:39761886-39761905 None:intergenic 35.0%
CTTTCAGAATGTATGGATGA+GGG + chr7_3:39761956-39761975 None:intergenic 35.0%
TCTTTCAGAATGTATGGATG+AGG + chr7_3:39761957-39761976 None:intergenic 35.0%
!! TTTTTGTGTTGGGGTTTTGG+GGG + chr7_3:39752573-39752592 None:intergenic 40.0%
! CTTTTTGTGTTGGGGTTTTG+GGG + chr7_3:39752574-39752593 None:intergenic 40.0%
! GAATTTGAAGAGTGTGTGTG+TGG + chr7_3:39752627-39752646 None:intergenic 40.0%
GAAGAAAACAACGAAGAAGG+AGG - chr7_3:39752694-39752713 Msa1103650:three_prime_UTR 40.0%
!! CGATTAGGACGATTTTGAAG+AGG + chr7_3:39752729-39752748 None:intergenic 40.0%
!! GAGGAGGTTTGATTTTCCTA+CGG + chr7_3:39752761-39752780 None:intergenic 40.0%
! AAGAAGTGAAAGCACAGATC+TGG - chr7_3:39752869-39752888 Msa1103650:three_prime_UTR 40.0%
! AGAAGTGAAAGCACAGATCT+GGG - chr7_3:39752870-39752889 Msa1103650:three_prime_UTR 40.0%
! GCTTATTATCGTGGTGCTTT+TGG - chr7_3:39752931-39752950 Msa1103650:three_prime_UTR 40.0%
!!! CTTTTGAGAGTATCAAGAGG+TGG - chr7_3:39752989-39753008 Msa1103650:CDS 40.0%
!! GGTTTGAGGCGTGTATTTTT+CGG - chr7_3:39753594-39753613 Msa1103650:intron 40.0%
CAAGGATGGAACGAATATTG+TGG + chr7_3:39754494-39754513 None:intergenic 40.0%
! TTTTCCGTAGAAGTCAAGGA+TGG + chr7_3:39754508-39754527 None:intergenic 40.0%
CTCTTCTCTTAGGAACCATA+AGG - chr7_3:39754709-39754728 Msa1103650:intron 40.0%
CAAAGGAAGGTAGACTCAAT+TGG - chr7_3:39755395-39755414 Msa1103650:intron 40.0%
CAGGGTCAAAACAAATCTCA+TGG + chr7_3:39755527-39755546 None:intergenic 40.0%
CTAGATTAAACCCTGAGAGT+TGG - chr7_3:39756193-39756212 Msa1103650:intron 40.0%
CGGCATTATGATAAACTCTC+AGG + chr7_3:39756244-39756263 None:intergenic 40.0%
ATGATTACCCAACCCAATGT+AGG + chr7_3:39756282-39756301 None:intergenic 40.0%
!! TTGGGTTGGGTAATCATGTT+AGG - chr7_3:39756285-39756304 Msa1103650:intron 40.0%
ACCTTAAAGCCCTAGACATA+TGG - chr7_3:39756355-39756374 Msa1103650:intron 40.0%
CCTTAAAGCCCTAGACATAT+GGG - chr7_3:39756356-39756375 Msa1103650:intron 40.0%
AGTGGTGATTTCATGGATGT+AGG - chr7_3:39756554-39756573 Msa1103650:intron 40.0%
GCTCCTTTCTTTCATGAGAA+GGG - chr7_3:39756582-39756601 Msa1103650:intron 40.0%
! ATGGGTTTTCTGTCATGAGT+TGG - chr7_3:39756683-39756702 Msa1103650:intron 40.0%
ACATGAACCATCTCTCATCT+TGG - chr7_3:39756829-39756848 Msa1103650:intron 40.0%
CTAATGTAGGCTCTATTGGA+AGG + chr7_3:39757473-39757492 None:intergenic 40.0%
CTTCCAATAGAGCCTACATT+AGG - chr7_3:39757471-39757490 Msa1103650:intron 40.0%
CAACCTAATGTAGGCTCTAT+TGG + chr7_3:39757477-39757496 None:intergenic 40.0%
CAATAGAGCCTACATTAGGT+TGG - chr7_3:39757475-39757494 Msa1103650:intron 40.0%
CCAATTTACCTAGTGCCTTA+AGG + chr7_3:39757563-39757582 None:intergenic 40.0%
! CCTTAAGGCACTAGGTAAAT+TGG - chr7_3:39757560-39757579 Msa1103650:intron 40.0%
!! GTGTGGTTTCTAGTATACTG+TGG + chr7_3:39758335-39758354 None:intergenic 40.0%
GGAATGGTAGATTTCGAAGA+AGG + chr7_3:39758427-39758446 None:intergenic 40.0%
ATTCAACTTTGTGGGGAAAG+CGG + chr7_3:39758621-39758640 None:intergenic 40.0%
TCTCCCTTAGAGTGAATAAG+TGG - chr7_3:39758866-39758885 Msa1103650:intron 40.0%
GAGTGAATAAGTGGAATCTC+GGG - chr7_3:39758875-39758894 Msa1103650:intron 40.0%
! AGGTGCTTTTACAACCAAAG+AGG - chr7_3:39759041-39759060 Msa1103650:intron 40.0%
ACAACCAAAGAGGTTAAGAG+GGG - chr7_3:39759051-39759070 Msa1103650:intron 40.0%
ATATCCCCTCTTAACCTCTT+TGG + chr7_3:39759058-39759077 None:intergenic 40.0%
AGGTTAAGAGGGGATATAGA+TGG - chr7_3:39759061-39759080 Msa1103650:intron 40.0%
! CAAGAATTGTTGTTCCACAC+AGG + chr7_3:39759254-39759273 None:intergenic 40.0%
GTTCGACCAAGAGATAAATC+AGG + chr7_3:39759283-39759302 None:intergenic 40.0%
TTTATCTCTTGGTCGAACTC+GGG - chr7_3:39759285-39759304 Msa1103650:intron 40.0%
GGCAAATAGTGCATTGTGAT+TGG + chr7_3:39759638-39759657 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG - chr7_3:39759646-39759665 Msa1103650:intron 40.0%
CTATTTGCCACAATTCAAGG+AGG - chr7_3:39759649-39759668 Msa1103650:intron 40.0%
TGTGGCTGAAAAATAGGAAG+TGG - chr7_3:39759672-39759691 Msa1103650:intron 40.0%
CCTATCTCACCATAATGTCA+TGG + chr7_3:39759779-39759798 None:intergenic 40.0%
CCATGACATTATGGTGAGAT+AGG - chr7_3:39759776-39759795 Msa1103650:intron 40.0%
! CAAATTTTAGGCCACTACTG+AGG + chr7_3:39760036-39760055 None:intergenic 40.0%
!! CAACAGGTGTTGATGATCAA+AGG + chr7_3:39760141-39760160 None:intergenic 40.0%
GTATAATGCAGCCCTTAATC+AGG - chr7_3:39760949-39760968 Msa1103650:intron 40.0%
TGGTTAATCTGCAACAGTCA+CGG - chr7_3:39761148-39761167 Msa1103650:intron 40.0%
GGTGGGAAATAAGTGTGATT+TGG - chr7_3:39761510-39761529 Msa1103650:intron 40.0%
TATCAGAGAAGTGAGCATAG+AGG - chr7_3:39761537-39761556 Msa1103650:intron 40.0%
CAAACCTTCTTCTTCTGCAA+GGG + chr7_3:39761572-39761591 None:intergenic 40.0%
ACAAACCTTCTTCTTCTGCA+AGG + chr7_3:39761573-39761592 None:intergenic 40.0%
CGATTCTACCAATGTCCAAA+CGG - chr7_3:39761615-39761634 Msa1103650:intron 40.0%
TGACAATCTCAAAAGCCGTT+TGG + chr7_3:39761633-39761652 None:intergenic 40.0%
AATCGAGTAACCCTGGTTAA+TGG - chr7_3:39761724-39761743 Msa1103650:intron 40.0%
ATCGAGTAACCCTGGTTAAT+GGG - chr7_3:39761725-39761744 Msa1103650:intron 40.0%
GAACAACATACAGCTCTTGA+AGG + chr7_3:39761832-39761851 None:intergenic 40.0%
! TTGAAGAGTGTGTGTGTGGA+TGG + chr7_3:39752623-39752642 None:intergenic 45.0%
AGTTGAGTTTCAGACGCAGA+TGG - chr7_3:39752831-39752850 Msa1103650:three_prime_UTR 45.0%
CGTTCCATCCTTGACTTCTA+CGG - chr7_3:39754501-39754520 Msa1103650:intron 45.0%
CACGGTTGAACTCTTCTCTT+AGG - chr7_3:39754699-39754718 Msa1103650:intron 45.0%
!! GGCTTGAAGAGCATTTAGAG+AGG + chr7_3:39755506-39755525 None:intergenic 45.0%
ATTTCCAGTGGAGCCTACAT+TGG - chr7_3:39756266-39756285 Msa1103650:intron 45.0%
TTTCCAGTGGAGCCTACATT+GGG - chr7_3:39756267-39756286 Msa1103650:intron 45.0%
! CCCATATGTCTAGGGCTTTA+AGG + chr7_3:39756359-39756378 None:intergenic 45.0%
!! GTGGGTTAGTGGTGATTTCA+TGG - chr7_3:39756547-39756566 Msa1103650:intron 45.0%
CGCTCCTTTCTTTCATGAGA+AGG - chr7_3:39756581-39756600 Msa1103650:intron 45.0%
AATACCAGGGAATCCTACAC+TGG - chr7_3:39758300-39758319 Msa1103650:intron 45.0%
ATACCAGGGAATCCTACACT+GGG - chr7_3:39758301-39758320 Msa1103650:intron 45.0%
TGGTATCAATCTCACTCGTG+TGG + chr7_3:39758352-39758371 None:intergenic 45.0%
TTCAACTTTGTGGGGAAAGC+GGG + chr7_3:39758620-39758639 None:intergenic 45.0%
TATGTGCACTGAGACGAGAT+TGG - chr7_3:39758950-39758969 Msa1103650:intron 45.0%
ATGTGCACTGAGACGAGATT+GGG - chr7_3:39758951-39758970 Msa1103650:intron 45.0%
TTCCACACAGGAATCGAGTT+CGG + chr7_3:39759242-39759261 None:intergenic 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG - chr7_3:39759666-39759685 Msa1103650:intron 45.0%
! TTTTAGGCCACTACTGAGGT+AGG + chr7_3:39760032-39760051 None:intergenic 45.0%
AATCTCTCATCTACCGTCAC+AGG + chr7_3:39760177-39760196 None:intergenic 45.0%
AATGTTGCTACCACCATGAC+TGG - chr7_3:39760288-39760307 Msa1103650:intron 45.0%
TGGAGTAAAATGATCAGGCG+AGG - chr7_3:39761001-39761020 Msa1103650:intron 45.0%
GCTGTCCAATCTTCGTCAAA+CGG - chr7_3:39761239-39761258 Msa1103650:intron 45.0%
CTCAACCGTTTGACGAAGAT+TGG + chr7_3:39761247-39761266 None:intergenic 45.0%
! GCTAATTGTGTCTGCTGCTT+AGG - chr7_3:39761306-39761325 Msa1103650:intron 45.0%
AGAGAAGTGAGCATAGAGGA+GGG - chr7_3:39761541-39761560 Msa1103650:intron 45.0%
AAAGCCCTTGCAGAAGAAGA+AGG - chr7_3:39761565-39761584 Msa1103650:intron 45.0%
CTCAAAAGCCGTTTGGACAT+TGG + chr7_3:39761626-39761645 None:intergenic 45.0%
TGAACCAGACCCATTAACCA+GGG + chr7_3:39761737-39761756 None:intergenic 45.0%
TTGAACCAGACCCATTAACC+AGG + chr7_3:39761738-39761757 None:intergenic 45.0%
ACATTGAGGAGGAACAGAAG+AGG + chr7_3:39761918-39761937 None:intergenic 45.0%
TGAGTTTCAGACGCAGATGG+TGG - chr7_3:39752834-39752853 Msa1103650:three_prime_UTR 50.0%
GGGATACTGCTGGACAAGAA+AGG - chr7_3:39752890-39752909 Msa1103650:three_prime_UTR 50.0%
ACGACACTGACACACAGACA+CGG - chr7_3:39753083-39753102 Msa1103650:CDS 50.0%
CGGATGGAGAAAACCCGATT+AGG - chr7_3:39753427-39753446 Msa1103650:intron 50.0%
TAGGCTTCGGAAGCTCATCA+GGG + chr7_3:39755545-39755564 None:intergenic 50.0%
TTAGGCTTCGGAAGCTCATC+AGG + chr7_3:39755546-39755565 None:intergenic 50.0%
CATAATGCCGGGATTTCCAG+TGG - chr7_3:39756254-39756273 Msa1103650:intron 50.0%
AGTGGAGCCTACATTGGGTT+GGG - chr7_3:39756272-39756291 Msa1103650:intron 50.0%
! TTGAGTTGTTGGGGGACTAC+CGG - chr7_3:39758237-39758256 Msa1103650:intron 50.0%
ATACCCAGTGTAGGATTCCC+TGG + chr7_3:39758307-39758326 None:intergenic 50.0%
GTGGGAATCATACCCAGTGT+AGG + chr7_3:39758316-39758335 None:intergenic 50.0%
AAAGCGGGAGTGATTCAAGG+TGG + chr7_3:39758605-39758624 None:intergenic 50.0%
ATTCTAGCCCGTGCTTTGCA+CGG - chr7_3:39758818-39758837 Msa1103650:intron 50.0%
ATGGATACCCGTGCAAAGCA+CGG + chr7_3:39758829-39758848 None:intergenic 50.0%
TGTGCACTGAGACGAGATTG+GGG - chr7_3:39758952-39758971 Msa1103650:intron 50.0%
TGTGTTAACCCTAGGGGAAG+GGG + chr7_3:39759322-39759341 None:intergenic 50.0%
GTGTGTTAACCCTAGGGGAA+GGG + chr7_3:39759323-39759342 None:intergenic 50.0%
TGTGTGTTAACCCTAGGGGA+AGG + chr7_3:39759324-39759343 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG - chr7_3:39759654-39759673 Msa1103650:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG + chr7_3:39759659-39759678 None:intergenic 50.0%
GGAGTTACCTACCTCAGTAG+TGG - chr7_3:39760022-39760041 Msa1103650:intron 50.0%
AGTCAGTCAGGAACCAGTCA+TGG + chr7_3:39760304-39760323 None:intergenic 50.0%
TCTGCTGATGTAGTGACTGC+AGG - chr7_3:39761268-39761287 Msa1103650:intron 50.0%
AGTGACTGCAGGCTAAGTCT+CGG - chr7_3:39761279-39761298 Msa1103650:intron 50.0%
TAGCACCGTTGCGAGAATGT+TGG - chr7_3:39761489-39761508 Msa1103650:intron 50.0%
ACCGTTGCGAGAATGTTGGT+GGG - chr7_3:39761493-39761512 Msa1103650:intron 50.0%
TCCCACCAACATTCTCGCAA+CGG + chr7_3:39761497-39761516 None:intergenic 50.0%
CAGAGAAGTGAGCATAGAGG+AGG - chr7_3:39761540-39761559 Msa1103650:intron 50.0%
GTCTGTGAATCGAGTAACCC+TGG - chr7_3:39761717-39761736 Msa1103650:intron 50.0%
! GTAACCCTGGTTAATGGGTC+TGG - chr7_3:39761730-39761749 Msa1103650:intron 50.0%
GAACTCGTTTCGCGCGAATC+GGG + chr7_3:39752785-39752804 None:intergenic 55.0%
CGAACTCGTTTCGCGCGAAT+CGG + chr7_3:39752786-39752805 None:intergenic 55.0%
!! ACGCAGATGGTGGAGATCGA+TGG - chr7_3:39752844-39752863 Msa1103650:three_prime_UTR 55.0%
! GCACAGATCTGGGATACTGC+TGG - chr7_3:39752880-39752899 Msa1103650:three_prime_UTR 55.0%
CTGTGTGTCAGTGTCGTGTC+TGG + chr7_3:39753080-39753099 None:intergenic 55.0%
ACTTATGGTGTGCATGCGCG+AGG - chr7_3:39755453-39755472 Msa1103650:intron 55.0%
GTAGGCTCCACTGGAAATCC+CGG + chr7_3:39756264-39756283 None:intergenic 55.0%
CAACCCAATGTAGGCTCCAC+TGG + chr7_3:39756273-39756292 None:intergenic 55.0%
CAGTGGAGCCTACATTGGGT+TGG - chr7_3:39756271-39756290 Msa1103650:intron 55.0%
TGAGTTGTTGGGGGACTACC+GGG - chr7_3:39758238-39758257 Msa1103650:intron 55.0%
GGGAAAGCGGGAGTGATTCA+AGG + chr7_3:39758608-39758627 None:intergenic 55.0%
TTCTAGCCCGTGCTTTGCAC+GGG - chr7_3:39758819-39758838 Msa1103650:intron 55.0%
TGGATACCCGTGCAAAGCAC+GGG + chr7_3:39758828-39758847 None:intergenic 55.0%
AGCCGAACTCGATTCCTGTG+TGG - chr7_3:39759237-39759256 Msa1103650:intron 55.0%
GTGTTAACCCTAGGGGAAGG+GGG + chr7_3:39759321-39759340 None:intergenic 55.0%
CAGTCAGGAACCAGTCATGG+TGG + chr7_3:39760301-39760320 None:intergenic 55.0%
CAGTCACGGATCTCGACTGT+TGG - chr7_3:39761162-39761181 Msa1103650:intron 55.0%
CGGATCTCGACTGTTGGATG+AGG - chr7_3:39761168-39761187 Msa1103650:intron 55.0%
CACCGTTGCGAGAATGTTGG+TGG - chr7_3:39761492-39761511 Msa1103650:intron 55.0%
! CTACGGCAGAGTCGCCGATT+AGG + chr7_3:39752744-39752763 None:intergenic 60.0%
CTAATCGGCGACTCTGCCGT+AGG - chr7_3:39752742-39752761 Msa1103650:three_prime_UTR 60.0%
GAGTTGTTGGGGGACTACCG+GGG - chr7_3:39758239-39758258 Msa1103650:intron 60.0%
TGGTCGAACTCGGGATGAGC+AGG - chr7_3:39759294-39759313 Msa1103650:intron 60.0%
TTCGCGCGAATCGGGAGAGG+AGG + chr7_3:39752777-39752796 None:intergenic 65.0%
CGTTTCGCGCGAATCGGGAG+AGG + chr7_3:39752780-39752799 None:intergenic 65.0%
AGCAGGACCCCCTTCCCCTA+GGG - chr7_3:39759311-39759330 Msa1103650:intron 65.0%
GAGCAGGACCCCCTTCCCCT+AGG - chr7_3:39759310-39759329 Msa1103650:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 39752563 39762202 39752563 ID=Msa1103650;Name=Msa1103650
chr7_3 mRNA 39752563 39762202 39752563 ID=Msa1103650-mRNA-1;Parent=Msa1103650;Name=Msa1103650-mRNA-1;_AED=0.01;_eAED=0.01;_QI=125|1|1|1|1|1|2|413|216
chr7_3 exon 39752563 39753286 39752563 ID=Msa1103650-mRNA-1:exon:8111;Parent=Msa1103650-mRNA-1
chr7_3 exon 39761738 39762202 39761738 ID=Msa1103650-mRNA-1:exon:8110;Parent=Msa1103650-mRNA-1
chr7_3 five_prime_UTR 39762078 39762202 39762078 ID=Msa1103650-mRNA-1:five_prime_utr;Parent=Msa1103650-mRNA-1
chr7_3 CDS 39761738 39762077 39761738 ID=Msa1103650-mRNA-1:cds;Parent=Msa1103650-mRNA-1
chr7_3 CDS 39752976 39753286 39752976 ID=Msa1103650-mRNA-1:cds;Parent=Msa1103650-mRNA-1
chr7_3 three_prime_UTR 39752563 39752975 39752563 ID=Msa1103650-mRNA-1:three_prime_utr;Parent=Msa1103650-mRNA-1
Gene Sequence

>Msa1103650

ATGTCAGAAGAAAACAACGAAGAAGGAGGAGAAGAGTACCTCTTCAAAATCGTCCTAATCGGCGACTCTGCCGTAGGAAAATCAAACCTCCTCTCCCGATTCGCGCGAAACGAGTTCGATTCAAATTCAAAAGCAACAATTGGAGTTGAGTTTCAGACGCAGATGGTGGAGATCGATGGTAAAGAAGTGAAAGCACAGATCTGGGATACTGCTGGACAAGAAAGGTTTAGAGCTGTTACTTCTGCTTATTATCGTGGTGCTTTTGGTGCTCTTGTTGTTTATGATATTAGTAGGAGAGGAACTTTTGAGAGTATCAAGAGGTGGCTTGATGAACTCACTACTCAAAATGATAGCACCGTTGCGAGAATGTTGGTGGGAAATAAGTGTGATTTGGAGAATATCAGAGAAGTGAGCATAGAGGAGGGCAAAGCCCTTGCAGAAGAAGAAGGTTTGTTCTTTATGGAGACATCAGCACTCGATTCTACCAATGTCCAAACGGCTTTTGAGATTGTCATCCGTGAAATTTACAATAATATCAGCCGCAAAGTCTTAAACTCCGATTCCTATAAAGCTGAATTGTCTGTGAATCGAGTAACCCTGGTTAATGGGTCTGGTTCAAAGAAAAATATGTTCAGTTCCTGTTGTTCTTGA
Protein sequence

>Msa1103650

MSEENNEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLENIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSDSYKAELSVNRVTLVNGSGSKKNMFSSCCS*