Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1112000 | XP_003623630.2 | 97.419 | 310 | 6 | 1 | 1 | 308 | 1 | 310 | 0.0 | 613 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1112000 | sp|Q9ZVH7|FAX3_ARATH | 46.789 | 327 | 138 | 11 | 4 | 303 | 2 | 319 | 2.44e-79 | 247 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1112000 | G7KY60 | 97.419 | 310 | 6 | 1 | 1 | 308 | 1 | 310 | 0.0 | 613 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0020630 | Msa1112000 | 0.827447 | 1.556738e-54 | -8.615850e-47 |
Msa0027540 | Msa1112000 | 0.841485 | 4.618922e-58 | -8.615850e-47 |
Msa0032120 | Msa1112000 | 0.814757 | 1.309734e-51 | -8.615850e-47 |
Msa0038350 | Msa1112000 | -0.836262 | 1.037490e-56 | -8.615850e-47 |
Msa0044710 | Msa1112000 | 0.837197 | 5.991379e-57 | -8.615850e-47 |
Msa0046660 | Msa1112000 | -0.818884 | 1.552846e-52 | -8.615850e-47 |
Msa0050720 | Msa1112000 | 0.830857 | 2.318892e-55 | -8.615850e-47 |
Msa0050770 | Msa1112000 | 0.836913 | 7.080357e-57 | -8.615850e-47 |
Msa0062020 | Msa1112000 | -0.801347 | 9.398280e-49 | -8.615850e-47 |
Msa0075310 | Msa1112000 | 0.848927 | 4.486224e-60 | -8.615850e-47 |
Msa0084680 | Msa1112000 | 0.817609 | 3.017849e-52 | -8.615850e-47 |
Msa0091480 | Msa1112000 | 0.813763 | 2.171432e-51 | -8.615850e-47 |
Msa0091770 | Msa1112000 | 0.830929 | 2.226275e-55 | -8.615850e-47 |
Msa0101320 | Msa1112000 | -0.801200 | 1.007418e-48 | -8.615850e-47 |
Msa0103160 | Msa1112000 | 0.818588 | 1.812894e-52 | -8.615850e-47 |
Msa0106370 | Msa1112000 | -0.813753 | 2.182295e-51 | -8.615850e-47 |
Msa0605620 | Msa1112000 | 0.805747 | 1.149589e-49 | -8.615850e-47 |
Msa0621120 | Msa1112000 | 0.821571 | 3.760883e-53 | -8.615850e-47 |
Msa0624730 | Msa1112000 | 0.805560 | 1.258508e-49 | -8.615850e-47 |
Msa0626230 | Msa1112000 | 0.801690 | 7.995234e-49 | -8.615850e-47 |
Msa0629370 | Msa1112000 | 0.806965 | 6.366028e-50 | -8.615850e-47 |
Msa0630990 | Msa1112000 | 0.804617 | 1.982520e-49 | -8.615850e-47 |
Msa0638320 | Msa1112000 | 0.800777 | 1.229377e-48 | -8.615850e-47 |
Msa0646570 | Msa1112000 | 0.802843 | 4.628079e-49 | -8.615850e-47 |
Msa0646640 | Msa1112000 | 0.807880 | 4.072949e-50 | -8.615850e-47 |
Msa0657050 | Msa1112000 | 0.811699 | 6.143421e-51 | -8.615850e-47 |
Msa0657670 | Msa1112000 | 0.833272 | 5.866696e-56 | -8.615850e-47 |
Msa0669220 | Msa1112000 | 0.806599 | 7.606649e-50 | -8.615850e-47 |
Msa0672120 | Msa1112000 | 0.827374 | 1.620897e-54 | -8.615850e-47 |
Msa0674220 | Msa1112000 | 0.803336 | 3.660152e-49 | -8.615850e-47 |
Msa0701030 | Msa1112000 | 0.811908 | 5.531505e-51 | -8.615850e-47 |
Msa0714600 | Msa1112000 | 0.848485 | 5.948398e-60 | -8.615850e-47 |
Msa0717920 | Msa1112000 | -0.814139 | 1.793343e-51 | -8.615850e-47 |
Msa0722930 | Msa1112000 | 0.808759 | 2.644801e-50 | -8.615850e-47 |
Msa0723140 | Msa1112000 | 0.807891 | 4.049659e-50 | -8.615850e-47 |
Msa0725480 | Msa1112000 | -0.818333 | 2.070043e-52 | -8.615850e-47 |
Msa0728280 | Msa1112000 | 0.800872 | 1.175289e-48 | -8.615850e-47 |
Msa0728380 | Msa1112000 | 0.808503 | 2.999199e-50 | -8.615850e-47 |
Msa0728540 | Msa1112000 | 0.813403 | 2.605791e-51 | -8.615850e-47 |
Msa0730180 | Msa1112000 | 0.801182 | 1.015736e-48 | -8.615850e-47 |
Msa0743650 | Msa1112000 | 0.828901 | 6.946783e-55 | -8.615850e-47 |
Msa0748610 | Msa1112000 | 0.811147 | 8.097754e-51 | -8.615850e-47 |
Msa0750380 | Msa1112000 | 0.801366 | 9.314932e-49 | -8.615850e-47 |
Msa0760890 | Msa1112000 | 0.817864 | 2.643477e-52 | -8.615850e-47 |
Msa0766100 | Msa1112000 | -0.824313 | 8.635344e-54 | -8.615850e-47 |
Msa0768490 | Msa1112000 | 0.808573 | 2.898792e-50 | -8.615850e-47 |
Msa0773610 | Msa1112000 | 0.802819 | 4.680954e-49 | -8.615850e-47 |
Msa0776480 | Msa1112000 | 0.817452 | 3.274085e-52 | -8.615850e-47 |
Msa0779240 | Msa1112000 | 0.801286 | 9.673378e-49 | -8.615850e-47 |
Msa0780140 | Msa1112000 | 0.807577 | 4.722474e-50 | -8.615850e-47 |
Msa0783340 | Msa1112000 | 0.824496 | 7.820247e-54 | -8.615850e-47 |
Msa0789280 | Msa1112000 | 0.802021 | 6.835139e-49 | -8.615850e-47 |
Msa0789290 | Msa1112000 | 0.802400 | 5.711287e-49 | -8.615850e-47 |
Msa0789300 | Msa1112000 | 0.801060 | 1.075835e-48 | -8.615850e-47 |
Msa0792510 | Msa1112000 | 0.808545 | 2.938970e-50 | -8.615850e-47 |
Msa0813320 | Msa1112000 | -0.850179 | 2.007514e-60 | -8.615850e-47 |
Msa0816640 | Msa1112000 | 0.807933 | 3.967319e-50 | -8.615850e-47 |
Msa0824140 | Msa1112000 | 0.807770 | 4.297097e-50 | -8.615850e-47 |
Msa0828570 | Msa1112000 | 0.839277 | 1.744681e-57 | -8.615850e-47 |
Msa0830720 | Msa1112000 | 0.804162 | 2.465567e-49 | -8.615850e-47 |
Msa0127440 | Msa1112000 | 0.802966 | 4.366255e-49 | -8.615850e-47 |
Msa0149500 | Msa1112000 | 0.802409 | 5.687999e-49 | -8.615850e-47 |
Msa0159750 | Msa1112000 | 0.827826 | 1.262281e-54 | -8.615850e-47 |
Msa0168100 | Msa1112000 | 0.834946 | 2.233773e-56 | -8.615850e-47 |
Msa0182930 | Msa1112000 | 0.850093 | 2.121956e-60 | -8.615850e-47 |
Msa0185640 | Msa1112000 | -0.809330 | 1.996306e-50 | -8.615850e-47 |
Msa0185700 | Msa1112000 | 0.806947 | 6.423271e-50 | -8.615850e-47 |
Msa0194570 | Msa1112000 | 0.804876 | 1.750050e-49 | -8.615850e-47 |
Msa0200950 | Msa1112000 | -0.816422 | 5.577056e-52 | -8.615850e-47 |
Msa0207000 | Msa1112000 | 0.812248 | 4.665174e-51 | -8.615850e-47 |
Msa0238070 | Msa1112000 | -0.803064 | 4.166774e-49 | -8.615850e-47 |
Msa0376510 | Msa1112000 | 0.814367 | 1.597626e-51 | -8.615850e-47 |
Msa0377280 | Msa1112000 | 0.812962 | 3.255998e-51 | -8.615850e-47 |
Msa0378080 | Msa1112000 | 0.805078 | 1.588239e-49 | -8.615850e-47 |
Msa0380310 | Msa1112000 | 0.803631 | 3.179852e-49 | -8.615850e-47 |
Msa0413740 | Msa1112000 | 0.805055 | 1.605989e-49 | -8.615850e-47 |
Msa0418430 | Msa1112000 | 0.835480 | 1.637088e-56 | -8.615850e-47 |
Msa0425050 | Msa1112000 | 0.824516 | 7.738542e-54 | -8.615850e-47 |
Msa0430620 | Msa1112000 | 0.832711 | 8.086670e-56 | -8.615850e-47 |
Msa0462590 | Msa1112000 | 0.837033 | 6.600185e-57 | -8.615850e-47 |
Msa0465790 | Msa1112000 | 0.806768 | 7.008318e-50 | -8.615850e-47 |
Msa0465800 | Msa1112000 | 0.830541 | 2.770679e-55 | -8.615850e-47 |
Msa0470180 | Msa1112000 | 0.817257 | 3.622706e-52 | -8.615850e-47 |
Msa0472740 | Msa1112000 | 0.840632 | 7.735448e-58 | -8.615850e-47 |
Msa0481380 | Msa1112000 | 0.801819 | 7.520513e-49 | -8.615850e-47 |
Msa0981740 | Msa1112000 | 0.813427 | 2.573470e-51 | -8.615850e-47 |
Msa1004210 | Msa1112000 | 0.840479 | 8.483903e-58 | -8.615850e-47 |
Msa1004260 | Msa1112000 | 0.805251 | 1.460613e-49 | -8.615850e-47 |
Msa1016670 | Msa1112000 | 0.815339 | 9.723871e-52 | -8.615850e-47 |
Msa1018020 | Msa1112000 | -0.824909 | 6.251310e-54 | -8.615850e-47 |
Msa1036390 | Msa1112000 | 0.807703 | 4.439774e-50 | -8.615850e-47 |
Msa1038050 | Msa1112000 | 0.812582 | 3.942837e-51 | -8.615850e-47 |
Msa1038320 | Msa1112000 | 0.805839 | 1.099706e-49 | -8.615850e-47 |
Msa1042890 | Msa1112000 | -0.820122 | 8.104527e-53 | -8.615850e-47 |
Msa1046610 | Msa1112000 | 0.848191 | 7.170448e-60 | -8.615850e-47 |
Msa1058010 | Msa1112000 | 0.813242 | 2.826845e-51 | -8.615850e-47 |
Msa1064210 | Msa1112000 | 0.802559 | 5.297710e-49 | -8.615850e-47 |
Msa1072350 | Msa1112000 | 0.809898 | 1.507029e-50 | -8.615850e-47 |
Msa1073840 | Msa1112000 | 0.825445 | 4.668596e-54 | -8.615850e-47 |
Msa1080460 | Msa1112000 | 0.816906 | 4.343235e-52 | -8.615850e-47 |
Msa1102540 | Msa1112000 | 0.830159 | 3.436276e-55 | -8.615850e-47 |
Msa1103650 | Msa1112000 | 0.809647 | 1.706431e-50 | -8.615850e-47 |
Msa0240780 | Msa1112000 | 0.803735 | 3.024648e-49 | -8.615850e-47 |
Msa0258670 | Msa1112000 | -0.832024 | 1.196947e-55 | -8.615850e-47 |
Msa0264940 | Msa1112000 | -0.821408 | 4.102998e-53 | -8.615850e-47 |
Msa0265580 | Msa1112000 | 0.802096 | 6.595830e-49 | -8.615850e-47 |
Msa0282170 | Msa1112000 | 0.810977 | 8.812028e-51 | -8.615850e-47 |
Msa0288240 | Msa1112000 | 0.811551 | 6.615355e-51 | -8.615850e-47 |
Msa0288330 | Msa1112000 | 0.810398 | 1.176049e-50 | -8.615850e-47 |
Msa0298940 | Msa1112000 | 0.858346 | 8.774887e-63 | -8.615850e-47 |
Msa0298970 | Msa1112000 | 0.836204 | 1.073265e-56 | -8.615850e-47 |
Msa0301180 | Msa1112000 | 0.806984 | 6.307680e-50 | -8.615850e-47 |
Msa0302990 | Msa1112000 | -0.821879 | 3.193125e-53 | -8.615850e-47 |
Msa0318250 | Msa1112000 | 0.847816 | 9.102622e-60 | -8.615850e-47 |
Msa0318270 | Msa1112000 | 0.858239 | 9.440837e-63 | -8.615850e-47 |
Msa0318310 | Msa1112000 | 0.854331 | 1.321550e-61 | -8.615850e-47 |
Msa0320540 | Msa1112000 | 0.804481 | 2.116126e-49 | -8.615850e-47 |
Msa0326670 | Msa1112000 | 0.804905 | 1.725824e-49 | -8.615850e-47 |
Msa0342200 | Msa1112000 | 0.819404 | 1.182343e-52 | -8.615850e-47 |
Msa0342340 | Msa1112000 | -0.804236 | 2.379590e-49 | -8.615850e-47 |
Msa0354390 | Msa1112000 | 0.804678 | 1.925112e-49 | -8.615850e-47 |
Msa0358170 | Msa1112000 | 0.833650 | 4.722145e-56 | -8.615850e-47 |
Msa1111630 | Msa1112000 | 0.905291 | 5.011083e-80 | -8.615850e-47 |
Msa1112000 | Msa1114020 | 0.807356 | 5.262021e-50 | -8.615850e-47 |
Msa1112000 | Msa1116550 | 0.847048 | 1.479009e-59 | -8.615850e-47 |
Msa1112000 | Msa1118140 | 0.808551 | 2.929783e-50 | -8.615850e-47 |
Msa1112000 | Msa1118150 | 0.812678 | 3.756927e-51 | -8.615850e-47 |
Msa1112000 | Msa1129560 | 0.826398 | 2.772999e-54 | -8.615850e-47 |
Msa1112000 | Msa1129720 | 0.808543 | 2.940912e-50 | -8.615850e-47 |
Msa1112000 | Msa1140010 | 0.801390 | 9.210345e-49 | -8.615850e-47 |
Msa1112000 | Msa1147980 | -0.814987 | 1.164343e-51 | -8.615850e-47 |
Msa1112000 | Msa1159360 | 0.800973 | 1.120860e-48 | -8.615850e-47 |
Msa1112000 | Msa1167170 | 0.861106 | 1.295180e-63 | -8.615850e-47 |
Msa1112000 | Msa1171690 | 0.805374 | 1.376793e-49 | -8.615850e-47 |
Msa1112000 | Msa1177240 | 0.840743 | 7.235201e-58 | -8.615850e-47 |
Msa1112000 | Msa1188940 | 0.809920 | 1.490706e-50 | -8.615850e-47 |
Msa1112000 | Msa1204980 | -0.803256 | 3.801275e-49 | -8.615850e-47 |
Msa1112000 | Msa1210770 | 0.823757 | 1.166580e-53 | -8.615850e-47 |
Msa1112000 | Msa1222030 | -0.807578 | 4.721214e-50 | -8.615850e-47 |
Msa1112000 | Msa1223460 | 0.831820 | 1.344025e-55 | -8.615850e-47 |
Msa1112000 | Msa1246740 | 0.806413 | 8.326669e-50 | -8.615850e-47 |
Msa1112000 | Msa1256540 | -0.807595 | 4.680695e-50 | -8.615850e-47 |
Msa1112000 | Msa1261470 | 0.846858 | 1.668135e-59 | -8.615850e-47 |
Msa1112000 | Msa1262310 | 0.840933 | 6.450264e-58 | -8.615850e-47 |
Msa1112000 | Msa1265820 | -0.810613 | 1.056596e-50 | -8.615850e-47 |
Msa1112000 | Msa1265960 | 0.812009 | 5.258142e-51 | -8.615850e-47 |
Msa1112000 | Msa1284520 | 0.803611 | 3.209256e-49 | -8.615850e-47 |
Msa1112000 | Msa1288320 | -0.815017 | 1.146499e-51 | -8.615850e-47 |
Msa1112000 | Msa1296960 | -0.807724 | 4.395680e-50 | -8.615850e-47 |
Msa1112000 | Msa1304180 | 0.849449 | 3.210451e-60 | -8.615850e-47 |
Msa1112000 | Msa1310110 | 0.806863 | 6.689789e-50 | -8.615850e-47 |
Msa1112000 | Msa1317030 | 0.845995 | 2.867698e-59 | -8.615850e-47 |
Msa1112000 | Msa1329990 | 0.811526 | 6.699339e-51 | -8.615850e-47 |
Msa1112000 | Msa1335970 | -0.819201 | 1.315040e-52 | -8.615850e-47 |
Msa1112000 | Msa1347290 | 0.831859 | 1.314533e-55 | -8.615850e-47 |
Msa1112000 | Msa1347620 | 0.819507 | 1.119784e-52 | -8.615850e-47 |
Msa1112000 | Msa1385620 | 0.801594 | 8.366199e-49 | -8.615850e-47 |
Msa1112000 | Msa1385900 | 0.816794 | 4.600975e-52 | -8.615850e-47 |
Msa1112000 | Msa1395230 | -0.800171 | 1.633505e-48 | -8.615850e-47 |
Msa1112000 | Msa1396750 | -0.846196 | 2.527563e-59 | -8.615850e-47 |
Msa1112000 | Msa1398480 | 0.831218 | 1.891124e-55 | -8.615850e-47 |
Msa1112000 | Msa1410430 | -0.815117 | 1.089650e-51 | -8.615850e-47 |
Msa1112000 | Msa1411070 | 0.829625 | 4.636811e-55 | -8.615850e-47 |
Msa1112000 | Msa1418200 | 0.834674 | 2.615261e-56 | -8.615850e-47 |
Msa1112000 | Msa1421870 | 0.829295 | 5.575484e-55 | -8.615850e-47 |
Msa1112000 | Msa1427830 | 0.819961 | 8.820746e-53 | -8.615850e-47 |
Msa1112000 | Msa1428420 | 0.836282 | 1.025085e-56 | -8.615850e-47 |
Msa1112000 | Msa1438270 | 0.807530 | 4.832948e-50 | -8.615850e-47 |
Msa1112000 | Msa1440610 | 0.826117 | 3.234597e-54 | -8.615850e-47 |
Msa1112000 | Msa1449880 | 0.800921 | 1.148449e-48 | -8.615850e-47 |
Msa1112000 | Msa1450020 | 0.804613 | 1.985734e-49 | -8.615850e-47 |
Msa1112000 | Msa1453620 | 0.837219 | 5.914255e-57 | -8.615850e-47 |
Msa1112000 | Msa1454110 | 0.807260 | 5.512433e-50 | -8.615850e-47 |
Msa1112000 | Msa1456810 | 0.809474 | 1.858438e-50 | -8.615850e-47 |
Msa1112000 | Msa1460310 | -0.821946 | 3.081482e-53 | -8.615850e-47 |
Msa1112000 | Msa1464560 | 0.813852 | 2.075437e-51 | -8.615850e-47 |
Msa0505390 | Msa1112000 | 0.808114 | 3.630165e-50 | -8.615850e-47 |
Msa0518040 | Msa1112000 | 0.811789 | 5.871950e-51 | -8.615850e-47 |
Msa0524050 | Msa1112000 | 0.829524 | 4.906589e-55 | -8.615850e-47 |
Msa0524120 | Msa1112000 | 0.804790 | 1.823655e-49 | -8.615850e-47 |
Msa0526640 | Msa1112000 | -0.836798 | 7.574658e-57 | -8.615850e-47 |
Msa0530950 | Msa1112000 | 0.816108 | 6.553270e-52 | -8.615850e-47 |
Msa0532300 | Msa1112000 | 0.810184 | 1.307985e-50 | -8.615850e-47 |
Msa0540070 | Msa1112000 | 0.805545 | 1.267729e-49 | -8.615850e-47 |
Msa0554140 | Msa1112000 | 0.808923 | 2.439925e-50 | -8.615850e-47 |
Msa0564930 | Msa1112000 | 0.815283 | 1.001063e-51 | -8.615850e-47 |
Msa0577230 | Msa1112000 | 0.802166 | 6.382948e-49 | -8.615850e-47 |
Msa0583740 | Msa1112000 | 0.837409 | 5.286257e-57 | -8.615850e-47 |
Msa0591780 | Msa1112000 | 0.802544 | 5.335859e-49 | -8.615850e-47 |
Msa0843690 | Msa1112000 | 0.815534 | 8.802410e-52 | -8.615850e-47 |
Msa0845590 | Msa1112000 | -0.808552 | 2.927654e-50 | -8.615850e-47 |
Msa0853540 | Msa1112000 | 0.804937 | 1.699701e-49 | -8.615850e-47 |
Msa0863250 | Msa1112000 | 0.804290 | 2.319015e-49 | -8.615850e-47 |
Msa0863770 | Msa1112000 | 0.829352 | 5.400748e-55 | -8.615850e-47 |
Msa0867050 | Msa1112000 | -0.813165 | 2.939094e-51 | -8.615850e-47 |
Msa0909710 | Msa1112000 | 0.826111 | 3.245550e-54 | -8.615850e-47 |
Msa0937940 | Msa1112000 | 0.811397 | 7.145541e-51 | -8.615850e-47 |
Msa0950320 | Msa1112000 | 0.823898 | 1.080924e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1112000 | MtrunA17_Chr7g0244941 | 97.419 | 310 | 6 | 1 | 1 | 308 | 1 | 310 | 0.0 | 613 |
Msa1112000 | MtrunA17_Chr7g0257051 | 32.184 | 174 | 106 | 2 | 127 | 296 | 54 | 219 | 8.23e-20 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1112000 | AT2G38550.1 | 46.789 | 327 | 138 | 11 | 4 | 303 | 2 | 319 | 2.48e-80 | 247 |
Msa1112000 | AT3G57280.1 | 28.931 | 159 | 102 | 3 | 146 | 296 | 57 | 212 | 5.71e-15 | 73.2 |
Find 107 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGAAATTTACTCTCTTA+TGG | 0.180959 | 7_3:-57763295 | None:intergenic |
GATGGGTGTGGTTGAGTTTA+GGG | 0.212767 | 7_3:-57757742 | None:intergenic |
GATGATCTCAGCAAAGTTTC+TGG | 0.226891 | 7_3:+57759308 | Msa1112000:CDS |
AGATGGGTGTGGTTGAGTTT+AGG | 0.238483 | 7_3:-57757743 | None:intergenic |
CAAATCATGTCTTGCCTTAT+CGG | 0.253536 | 7_3:-57759177 | None:intergenic |
TTCCTTTCCTTTATGATAAC+AGG | 0.269414 | 7_3:+57760749 | Msa1112000:CDS |
CGGAAAATGCAGAGGAAGTT+TGG | 0.270047 | 7_3:-57757551 | None:intergenic |
CTGCGTGAGATCAGCATATT+AGG | 0.305459 | 7_3:+57762067 | Msa1112000:CDS |
GATGTTTCTCTTACCAAATA+AGG | 0.308050 | 7_3:+57763367 | Msa1112000:three_prime_UTR |
CAGGAAGCATTGCAGCAATA+AGG | 0.309359 | 7_3:+57760768 | Msa1112000:CDS |
GGGCGAAGAAAACGAGAGTT+TGG | 0.320704 | 7_3:-57757663 | None:intergenic |
GCCCTCTTCTCTTGCTTTGA+AGG | 0.322787 | 7_3:+57760862 | Msa1112000:CDS |
TTGCTGATGGTTAGGATTAG+TGG | 0.332050 | 7_3:+57763105 | Msa1112000:three_prime_UTR |
GCATTGCAGCAATAAGGTTT+GGG | 0.336448 | 7_3:+57760774 | Msa1112000:CDS |
TTAGAAGGTAAACCACAAAA+AGG | 0.338660 | 7_3:+57762775 | Msa1112000:CDS |
GAAACTCATCGAAGCCATTT+AGG | 0.344874 | 7_3:-57757693 | None:intergenic |
CTTCTTAGAATACACTTCAT+AGG | 0.347106 | 7_3:-57759108 | None:intergenic |
CAGCAAAGTTTCTGGAGTTC+GGG | 0.348326 | 7_3:+57759316 | Msa1112000:CDS |
TCAGCAAAGTTTCTGGAGTT+CGG | 0.355747 | 7_3:+57759315 | Msa1112000:CDS |
GAAAACGAGAGTTTGGGAAT+TGG | 0.366535 | 7_3:-57757656 | None:intergenic |
AGCATTGCAGCAATAAGGTT+TGG | 0.368282 | 7_3:+57760773 | Msa1112000:CDS |
AATCAAACAGGTTGGTTGTT+CGG | 0.378634 | 7_3:-57757571 | None:intergenic |
CGAAGCCATTTAGGTTGAAA+AGG | 0.389526 | 7_3:-57757684 | None:intergenic |
AATGCTTCCTGTTATCATAA+AGG | 0.390887 | 7_3:-57760756 | None:intergenic |
CCCTCTTCTCTTGCTTTGAA+GGG | 0.393105 | 7_3:+57760863 | Msa1112000:CDS |
CTTATTTCACTGCTTTGATC+AGG | 0.394428 | 7_3:+57762205 | Msa1112000:CDS |
AACAATGGAATCAATGAAAG+AGG | 0.408728 | 7_3:-57757616 | None:intergenic |
CGGTTTGCTGCGTTGATTGA+GGG | 0.408744 | 7_3:-57757840 | None:intergenic |
GGAAGCATGGAAGCAGGCTT+TGG | 0.413475 | 7_3:+57759037 | Msa1112000:CDS |
TTTACATGCTTACTTGAGCC+TGG | 0.419544 | 7_3:+57763318 | Msa1112000:three_prime_UTR |
TGGTTAGGATTAGTGGTTCA+TGG | 0.420233 | 7_3:+57763112 | Msa1112000:three_prime_UTR |
CAGAGGAAGTTTGGAATAAT+CGG | 0.424723 | 7_3:-57757542 | None:intergenic |
AAGACTCGTTGCTGATGGTT+AGG | 0.426716 | 7_3:+57763097 | Msa1112000:three_prime_UTR |
ACTTTGCTGAGATCATCATC+TGG | 0.441046 | 7_3:-57759302 | None:intergenic |
TCCACAATTTCCTTCACCTC+AGG | 0.451532 | 7_3:-57759266 | None:intergenic |
GCAGCGAAAACGAGGGTTAA+CGG | 0.453399 | 7_3:-57757860 | None:intergenic |
AGCATATGATCTTACCTGTC+TGG | 0.456066 | 7_3:-57760886 | None:intergenic |
CATTTGCAGTGGTGCGGTAG+CGG | 0.456458 | 7_3:+57762729 | Msa1112000:intron |
TGCAGGTTTGTTACTATCTG+CGG | 0.463565 | 7_3:+57760721 | Msa1112000:intron |
GCAGGTTTGTTACTATCTGC+GGG | 0.468290 | 7_3:+57760722 | Msa1112000:intron |
TTATGTGGGATATTATGAAC+TGG | 0.468625 | 7_3:+57763221 | Msa1112000:three_prime_UTR |
TCAAACTTTGAAGGTGAAGC+AGG | 0.469674 | 7_3:+57762799 | Msa1112000:CDS |
GTTGGGCTTGCAGCTATAGC+AGG | 0.473435 | 7_3:+57762034 | Msa1112000:intron |
GGTGAAGTTGAGGTAGAGAA+GGG | 0.479329 | 7_3:+57758984 | Msa1112000:CDS |
AGTGAAGAATGAAATCAAAC+AGG | 0.484400 | 7_3:-57757583 | None:intergenic |
GGTTAGGATTAGTGGTTCAT+GGG | 0.488878 | 7_3:+57763113 | Msa1112000:three_prime_UTR |
TGGTGAAGTTGAGGTAGAGA+AGG | 0.492662 | 7_3:+57758983 | Msa1112000:CDS |
GTTGAAGATACAGGCCGATA+AGG | 0.495852 | 7_3:+57759163 | Msa1112000:CDS |
AGGAAGAGAGAGTTTGAAAG+TGG | 0.502707 | 7_3:-57757810 | None:intergenic |
GCAGGCTTTGGATACATTCA+AGG | 0.503712 | 7_3:+57759049 | Msa1112000:CDS |
CTTGCTTTGAAGGGCCAGAC+AGG | 0.507466 | 7_3:+57760872 | Msa1112000:CDS |
GGCGAAGAAAACGAGAGTTT+GGG | 0.510115 | 7_3:-57757662 | None:intergenic |
TTCAGAACAGTTGAAGATAC+AGG | 0.510496 | 7_3:+57759154 | Msa1112000:CDS |
CTATGAAGTGTATTCTAAGA+AGG | 0.512585 | 7_3:+57759109 | Msa1112000:CDS |
GAAGCCATTTAGGTTGAAAA+GGG | 0.513339 | 7_3:-57757683 | None:intergenic |
TTACATGCTTACTTGAGCCT+GGG | 0.514785 | 7_3:+57763319 | Msa1112000:three_prime_UTR |
AGGAAACTAGTTCAGTGATA+AGG | 0.517640 | 7_3:+57762819 | Msa1112000:exon |
GCGAAGGAAATCACTGAAGA+AGG | 0.518243 | 7_3:+57759209 | Msa1112000:CDS |
GAACAAGCTTTGAAGCTACA+AGG | 0.523582 | 7_3:+57759071 | Msa1112000:CDS |
TCGTCAAGACTCGTTGCTGA+TGG | 0.524011 | 7_3:+57763092 | Msa1112000:three_prime_UTR |
ACGGTTTGCTGCGTTGATTG+AGG | 0.525103 | 7_3:-57757841 | None:intergenic |
ATCACAGGAAGCATGGAAGC+AGG | 0.525285 | 7_3:+57759031 | Msa1112000:CDS |
ACCTGAGGTGAAGGAAATTG+TGG | 0.531778 | 7_3:+57759265 | Msa1112000:CDS |
CCCTTCAAAGCAAGAGAAGA+GGG | 0.533399 | 7_3:-57760863 | None:intergenic |
CTTTGCTGAGATCATCATCT+GGG | 0.538560 | 7_3:-57759301 | None:intergenic |
GTTAGTTACTTTACAACCCC+AGG | 0.543512 | 7_3:-57763336 | None:intergenic |
AGGAGGAATCACAGGAAGCA+TGG | 0.543731 | 7_3:+57759024 | Msa1112000:CDS |
TGATTTGAGTGTTGTGGCGA+AGG | 0.544539 | 7_3:+57759193 | Msa1112000:CDS |
CTTCGGAGAATGAGAGAGAT+GGG | 0.547043 | 7_3:-57757759 | None:intergenic |
TGAGAATTCACCTGAGGTGA+AGG | 0.548278 | 7_3:+57759256 | Msa1112000:CDS |
TAGGATTAGTGGTTCATGGG+TGG | 0.549493 | 7_3:+57763116 | Msa1112000:three_prime_UTR |
GTGTTGCGGTGTTTGAGTAA+AGG | 0.557167 | 7_3:-57757788 | None:intergenic |
ACTTCGGAGAATGAGAGAGA+TGG | 0.559423 | 7_3:-57757760 | None:intergenic |
TAACACAGAAACTGAATCCA+TGG | 0.560337 | 7_3:-57757717 | None:intergenic |
TACATGCTTACTTGAGCCTG+GGG | 0.561937 | 7_3:+57763320 | Msa1112000:three_prime_UTR |
TAGTTCTGAGGAGGAATCAC+AGG | 0.564462 | 7_3:+57759016 | Msa1112000:CDS |
GCGTAGCAGCAGCGAAAACG+AGG | 0.568145 | 7_3:-57757868 | None:intergenic |
TTGAGTAAAGGATGAAACTT+CGG | 0.573545 | 7_3:-57757776 | None:intergenic |
AAGAATGAAATCAAACAGGT+TGG | 0.573943 | 7_3:-57757579 | None:intergenic |
TTGTGAACTGTATAGGATCA+TGG | 0.575738 | 7_3:+57758963 | Msa1112000:intron |
GGGGAATGATGTTAGTTCTG+AGG | 0.580091 | 7_3:+57759004 | Msa1112000:CDS |
AACAAGCTTTGAAGCTACAA+GGG | 0.592755 | 7_3:+57759072 | Msa1112000:CDS |
CATTGCAGCAATAAGGTTTG+GGG | 0.597894 | 7_3:+57760775 | Msa1112000:CDS |
GCCCTTCAAAGCAAGAGAAG+AGG | 0.598127 | 7_3:-57760864 | None:intergenic |
GGACTTACAGAGTCATGTTG+AGG | 0.601334 | 7_3:-57757890 | None:intergenic |
AAGACATGATTTGAGTGTTG+TGG | 0.608087 | 7_3:+57759187 | Msa1112000:CDS |
ATAGGATCATGGTGAAGTTG+AGG | 0.610635 | 7_3:+57758974 | Msa1112000:intron |
AGTGAAGACTGAAGAATGCA+AGG | 0.611193 | 7_3:-57763272 | None:intergenic |
ACAATGGAATCAATGAAAGA+GGG | 0.615187 | 7_3:-57757615 | None:intergenic |
AGGAAGTTTGGAATAATCGG+TGG | 0.620484 | 7_3:-57757539 | None:intergenic |
TTCCTGTTATCATAAAGGAA+AGG | 0.622707 | 7_3:-57760751 | None:intergenic |
GGCTTCGATGAGTTTCACCA+TGG | 0.627621 | 7_3:+57757700 | Msa1112000:CDS |
GTGAAGTTGAGGTAGAGAAG+GGG | 0.628557 | 7_3:+57758985 | Msa1112000:CDS |
GAATGATGTTAGTTCTGAGG+AGG | 0.633496 | 7_3:+57759007 | Msa1112000:CDS |
ACAAGCTTTGAAGCTACAAG+GGG | 0.644302 | 7_3:+57759073 | Msa1112000:CDS |
GTATTCTAAGAAGGCCATTG+TGG | 0.645713 | 7_3:+57759118 | Msa1112000:CDS |
TGCTGCTGAGAATTCACCTG+AGG | 0.654229 | 7_3:+57759250 | Msa1112000:CDS |
GAGAATGAGAGAGATGGGTG+TGG | 0.656406 | 7_3:-57757754 | None:intergenic |
GCTGAGATCATCATCTGGGG+AGG | 0.657948 | 7_3:-57759297 | None:intergenic |
TGGTTGTTCGGAAAATGCAG+AGG | 0.658234 | 7_3:-57757559 | None:intergenic |
GGTTTGTTACTATCTGCGGG+TGG | 0.661424 | 7_3:+57760725 | Msa1112000:intron |
GTTTGGCATTTGCAGTGGTG+CGG | 0.667652 | 7_3:+57762723 | Msa1112000:intron |
AGTATCTTGCAAAACCACAA+TGG | 0.670863 | 7_3:-57759132 | None:intergenic |
CGTTGATTGAGGGCATAACG+AGG | 0.686365 | 7_3:-57757830 | None:intergenic |
AGAGTTTGAAAGTGGTGTTG+CGG | 0.690634 | 7_3:-57757802 | None:intergenic |
TTTGCTGAGATCATCATCTG+GGG | 0.696144 | 7_3:-57759300 | None:intergenic |
CGTAGCAGCAGCGAAAACGA+GGG | 0.710585 | 7_3:-57757867 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTATTATAAAAATATTGAA+AGG | + | chr7_3:57758605-57758624 | Msa1112000:intron | 10.0% |
!!! | ATGGTTAATAAATTTTAAAT+CGG | + | chr7_3:57759384-57759403 | Msa1112000:intron | 10.0% |
!!! | TTTTTTTCTTAATTCTAAAA+AGG | + | chr7_3:57760935-57760954 | Msa1112000:intron | 10.0% |
!!! | TTTTTTCTTAATTCTAAAAA+GGG | + | chr7_3:57760936-57760955 | Msa1112000:intron | 10.0% |
!!! | ATTTTGGTTTTATATAATAT+TGG | + | chr7_3:57761767-57761786 | Msa1112000:intron | 10.0% |
!! | TTTAGTTGAAAATTGAAATT+TGG | - | chr7_3:57758007-57758026 | None:intergenic | 15.0% |
!! | ATTTATGTTTGAATATATCT+AGG | + | chr7_3:57758281-57758300 | Msa1112000:intron | 15.0% |
!!! | AAAGACAAAAAAATGTTTTA+GGG | - | chr7_3:57758656-57758675 | None:intergenic | 15.0% |
!!! | AAAAGACAAAAAAATGTTTT+AGG | - | chr7_3:57758657-57758676 | None:intergenic | 15.0% |
!!! | TGGTTAATAAATTTTAAATC+GGG | + | chr7_3:57759385-57759404 | Msa1112000:intron | 15.0% |
!!! | GTAATTTTGTAATTTTAGTA+GGG | - | chr7_3:57761094-57761113 | None:intergenic | 15.0% |
!!! | TGTAATTTTGTAATTTTAGT+AGG | - | chr7_3:57761095-57761114 | None:intergenic | 15.0% |
!! | AATCACAATAAACAATTAAT+TGG | + | chr7_3:57761131-57761150 | Msa1112000:intron | 15.0% |
!!! | TATTTATTTTTGAAAAGTAG+TGG | + | chr7_3:57763247-57763266 | Msa1112000:three_prime_UTR | 15.0% |
!!! | ACTTTATTCATTTTCTCAAA+TGG | + | chr7_3:57757924-57757943 | Msa1112000:intron | 20.0% |
!!! | CTTTATTCATTTTCTCAAAT+GGG | + | chr7_3:57757925-57757944 | Msa1112000:intron | 20.0% |
!!! | TTTATTCATTTTCTCAAATG+GGG | + | chr7_3:57757926-57757945 | Msa1112000:intron | 20.0% |
!! | ATAGATTATAGATAGATAGA+TGG | + | chr7_3:57758044-57758063 | Msa1112000:intron | 20.0% |
!! | AAAATTACAAAATGGCTAAA+AGG | - | chr7_3:57758099-57758118 | None:intergenic | 20.0% |
!! | TACATGTGAAAATTACAAAA+TGG | - | chr7_3:57758107-57758126 | None:intergenic | 20.0% |
!!! | TGATTCTATATAATTGATTC+TGG | + | chr7_3:57758233-57758252 | Msa1112000:intron | 20.0% |
!! | GTTTAATTGAAGCTAAAAAT+TGG | - | chr7_3:57758364-57758383 | None:intergenic | 20.0% |
!! | TCAATTAAACTCAATTCTAT+AGG | + | chr7_3:57758374-57758393 | Msa1112000:intron | 20.0% |
!! | ACAAAAAATACTCTCAAATA+CGG | - | chr7_3:57758531-57758550 | None:intergenic | 20.0% |
!!! | AAGACAAAAAAATGTTTTAG+GGG | - | chr7_3:57758655-57758674 | None:intergenic | 20.0% |
!! | TATTATGAAGAAAAACAGAT+TGG | + | chr7_3:57758697-57758716 | Msa1112000:intron | 20.0% |
!! | ATTATGAAGAAAAACAGATT+GGG | + | chr7_3:57758698-57758717 | Msa1112000:intron | 20.0% |
!! | TGAAATAAGACTTGATATTT+AGG | + | chr7_3:57758847-57758866 | Msa1112000:intron | 20.0% |
!! | GAAATAAGACTTGATATTTA+GGG | + | chr7_3:57758848-57758867 | Msa1112000:intron | 20.0% |
!!! | ACATAATTTTGTCTTCTAAA+GGG | + | chr7_3:57758871-57758890 | Msa1112000:intron | 20.0% |
!!! | AATATAGCAAGGTTTTAAAT+TGG | + | chr7_3:57759468-57759487 | Msa1112000:intron | 20.0% |
!! | AGATTATTTATTGATGTTGT+TGG | + | chr7_3:57759648-57759667 | Msa1112000:intron | 20.0% |
!! | TCTCATTAAATGATTTAGTA+AGG | + | chr7_3:57760581-57760600 | Msa1112000:intron | 20.0% |
!!! | AGTCTGAAATCATATAAAAA+AGG | + | chr7_3:57760836-57760855 | Msa1112000:CDS | 20.0% |
!! | AATTGTTTATTGTGATTCAA+AGG | - | chr7_3:57761128-57761147 | None:intergenic | 20.0% |
!! | AACAATTAATTGGACTTAAT+AGG | + | chr7_3:57761141-57761160 | Msa1112000:intron | 20.0% |
!!! | TATTTTCTCTATTTAGAGTT+GGG | - | chr7_3:57761194-57761213 | None:intergenic | 20.0% |
!!! | ATATTTTCTCTATTTAGAGT+TGG | - | chr7_3:57761195-57761214 | None:intergenic | 20.0% |
!! | CTAAATAGAGAAAATATAAG+TGG | + | chr7_3:57761198-57761217 | Msa1112000:intron | 20.0% |
!! | ACAATTAAACCAATGATAAT+TGG | - | chr7_3:57761512-57761531 | None:intergenic | 20.0% |
!!! | CATTTATTTTATGCCAATAA+GGG | + | chr7_3:57761563-57761582 | Msa1112000:intron | 20.0% |
!!! | ATTTATTTTATGCCAATAAG+GGG | + | chr7_3:57761564-57761583 | Msa1112000:intron | 20.0% |
!! | TTCAAAAAATCATTGTTTCA+TGG | + | chr7_3:57761593-57761612 | Msa1112000:intron | 20.0% |
!! | TAAAAGAAATCGTAAAAGTA+TGG | + | chr7_3:57761679-57761698 | Msa1112000:intron | 20.0% |
!!! | AAAAGAAATCGTAAAAGTAT+GGG | + | chr7_3:57761680-57761699 | Msa1112000:intron | 20.0% |
!!! | TATTTTAGGGTTTGAAATTT+TGG | + | chr7_3:57761751-57761770 | Msa1112000:intron | 20.0% |
!! | GTGATCAAATATATTAGAAT+TGG | + | chr7_3:57761849-57761868 | Msa1112000:intron | 20.0% |
!!! | TCAACTATTTTGTAATTGAT+TGG | + | chr7_3:57761944-57761963 | Msa1112000:intron | 20.0% |
!! | TAATGAATTAGTGTTACAAA+CGG | + | chr7_3:57762439-57762458 | Msa1112000:intron | 20.0% |
!!! | TTTTGTTGTATAACTTTGTT+TGG | + | chr7_3:57762706-57762725 | Msa1112000:intron | 20.0% |
!! | ATGATATCAATAAACTGAAT+AGG | - | chr7_3:57762849-57762868 | None:intergenic | 20.0% |
!! | ATGTTTAACTGAACTTTATT+GGG | - | chr7_3:57762883-57762902 | None:intergenic | 20.0% |
!! | TATGTTTAACTGAACTTTAT+TGG | - | chr7_3:57762884-57762903 | None:intergenic | 20.0% |
! | TCAAAGTAAGAGAAAAACAA+TGG | - | chr7_3:57757634-57757653 | None:intergenic | 25.0% |
!! | TGAATAAAGTTAGATCCTTT+TGG | - | chr7_3:57757914-57757933 | None:intergenic | 25.0% |
! | TGCATTGAATTTGACAAAAA+TGG | - | chr7_3:57757957-57757976 | None:intergenic | 25.0% |
!!! | TTCACCTCTAAAATCAATTT+TGG | + | chr7_3:57758409-57758428 | Msa1112000:intron | 25.0% |
! | TTATGAAGAAAAACAGATTG+GGG | + | chr7_3:57758699-57758718 | Msa1112000:intron | 25.0% |
!! | GACATAATTTTGTCTTCTAA+AGG | + | chr7_3:57758870-57758889 | Msa1112000:intron | 25.0% |
!! | TTCTAAAGGGACTTATAATT+AGG | + | chr7_3:57758884-57758903 | Msa1112000:intron | 25.0% |
! | TAACAGTTTCTGCATTATTT+AGG | - | chr7_3:57759437-57759456 | None:intergenic | 25.0% |
! | CGAAAAGTTATGAATAAATG+TGG | + | chr7_3:57759530-57759549 | Msa1112000:intron | 25.0% |
! | ATTACGATTTATGCATGATA+AGG | + | chr7_3:57759823-57759842 | Msa1112000:intron | 25.0% |
! | ATCATATAAATATGGCATTG+TGG | + | chr7_3:57759987-57760006 | Msa1112000:intron | 25.0% |
! | TTGATATGCTACATATGATT+TGG | - | chr7_3:57760501-57760520 | None:intergenic | 25.0% |
!!! | CAATTTTGACTACCATAATA+TGG | + | chr7_3:57760518-57760537 | Msa1112000:intron | 25.0% |
! | GAACATTAAAGTGGATATTT+GGG | - | chr7_3:57760671-57760690 | None:intergenic | 25.0% |
! | TGAACATTAAAGTGGATATT+TGG | - | chr7_3:57760672-57760691 | None:intergenic | 25.0% |
!!! | GATTTCATTTTTGACAATCT+TGG | - | chr7_3:57761017-57761036 | None:intergenic | 25.0% |
! | AAACATTTAAATCCAGGAAT+CGG | + | chr7_3:57761064-57761083 | Msa1112000:intron | 25.0% |
! | GTAAAAATTGCATTTCAACT+CGG | - | chr7_3:57761473-57761492 | None:intergenic | 25.0% |
!!! | GCATTTATTTTATGCCAATA+AGG | + | chr7_3:57761562-57761581 | Msa1112000:intron | 25.0% |
!!! | TTTATTTTATGCCAATAAGG+GGG | + | chr7_3:57761565-57761584 | Msa1112000:intron | 25.0% |
!!! | ATGAAAGTGTTGCATATTTT+AGG | + | chr7_3:57761737-57761756 | Msa1112000:intron | 25.0% |
!!! | TGAAAGTGTTGCATATTTTA+GGG | + | chr7_3:57761738-57761757 | Msa1112000:intron | 25.0% |
! | CACAAATTAAAGCAGATAAA+AGG | - | chr7_3:57761795-57761814 | None:intergenic | 25.0% |
!! | AGCTGATTTAAATTACTTGT+TGG | + | chr7_3:57762016-57762035 | Msa1112000:intron | 25.0% |
!! | GCTGATTTAAATTACTTGTT+GGG | + | chr7_3:57762017-57762036 | Msa1112000:intron | 25.0% |
!! | ATTTGACTTAAACAGTAAAC+AGG | - | chr7_3:57762395-57762414 | None:intergenic | 25.0% |
! | GTTGAACATTAAATGACATT+TGG | + | chr7_3:57762632-57762651 | Msa1112000:intron | 25.0% |
!! | AGACTGTCATAGTAAATTTT+TGG | + | chr7_3:57763035-57763054 | Msa1112000:three_prime_UTR | 25.0% |
!! | TTTATTTCTTTGATATTCGC+AGG | + | chr7_3:57763064-57763083 | Msa1112000:intron | 25.0% |
! | TTGTGAAATTTACTCTCTTA+TGG | - | chr7_3:57763298-57763317 | None:intergenic | 25.0% |
AAGAATGAAATCAAACAGGT+TGG | - | chr7_3:57757582-57757601 | None:intergenic | 30.0% | |
AGTGAAGAATGAAATCAAAC+AGG | - | chr7_3:57757586-57757605 | None:intergenic | 30.0% | |
ACAATGGAATCAATGAAAGA+GGG | - | chr7_3:57757618-57757637 | None:intergenic | 30.0% | |
AACAATGGAATCAATGAAAG+AGG | - | chr7_3:57757619-57757638 | None:intergenic | 30.0% | |
TTGAGTAAAGGATGAAACTT+CGG | - | chr7_3:57757779-57757798 | None:intergenic | 30.0% | |
CACAGTTGAATTACACAAAA+TGG | - | chr7_3:57758190-57758209 | None:intergenic | 30.0% | |
AATTCAACTGTGTGTATGTT+TGG | + | chr7_3:57758198-57758217 | Msa1112000:intron | 30.0% | |
! | TAAAAGTGAGTTGAAGGTAA+AGG | + | chr7_3:57758257-57758276 | Msa1112000:intron | 30.0% |
AAAAATACTCTCAAATACGG+TGG | - | chr7_3:57758528-57758547 | None:intergenic | 30.0% | |
!!! | CAAAAAAATGTTTTAGGGGA+GGG | - | chr7_3:57758651-57758670 | None:intergenic | 30.0% |
!!! | ACAAAAAAATGTTTTAGGGG+AGG | - | chr7_3:57758652-57758671 | None:intergenic | 30.0% |
! | TTTTTGTCTTTTCCCATGTT+AGG | + | chr7_3:57758665-57758684 | Msa1112000:intron | 30.0% |
! | TTTTGTCTTTTCCCATGTTA+GGG | + | chr7_3:57758666-57758685 | Msa1112000:intron | 30.0% |
ATACAAAATTCCCCTAACAT+GGG | - | chr7_3:57758680-57758699 | None:intergenic | 30.0% | |
AATACAAAATTCCCCTAACA+TGG | - | chr7_3:57758681-57758700 | None:intergenic | 30.0% | |
TATGAAGAAAAACAGATTGG+GGG | + | chr7_3:57758700-57758719 | Msa1112000:intron | 30.0% | |
CTTTCAATAATGCTACTACT+AGG | - | chr7_3:57758805-57758824 | None:intergenic | 30.0% | |
GGACTTATAATTAGGAAGAT+AGG | + | chr7_3:57758892-57758911 | Msa1112000:intron | 30.0% | |
!! | TGTTGTTGAATTTGCTAATG+TGG | + | chr7_3:57758939-57758958 | Msa1112000:intron | 30.0% |
CTTCTTAGAATACACTTCAT+AGG | - | chr7_3:57759111-57759130 | None:intergenic | 30.0% | |
! | CTATGAAGTGTATTCTAAGA+AGG | + | chr7_3:57759109-57759128 | Msa1112000:CDS | 30.0% |
! | TTTTATGTTGGTATACCCTA+TGG | + | chr7_3:57759341-57759360 | Msa1112000:CDS | 30.0% |
TACCCTATGGTATGTATTTA+TGG | + | chr7_3:57759354-57759373 | Msa1112000:intron | 30.0% | |
AGCCATAAATACATACCATA+GGG | - | chr7_3:57759359-57759378 | None:intergenic | 30.0% | |
ATGTATTTATGGCTGTTGTA+TGG | + | chr7_3:57759365-57759384 | Msa1112000:intron | 30.0% | |
AGATGCATTTGAATATAGCA+AGG | + | chr7_3:57759457-57759476 | Msa1112000:intron | 30.0% | |
!!! | AAGGTTTTAAATTGGAGTTG+TGG | + | chr7_3:57759476-57759495 | Msa1112000:intron | 30.0% |
CTGCAATATCATTATTTGGA+AGG | - | chr7_3:57759587-57759606 | None:intergenic | 30.0% | |
TCAATAAATAATCTAGTCCG+TGG | - | chr7_3:57759642-57759661 | None:intergenic | 30.0% | |
TTGTCCTCAACCTATTAATA+GGG | - | chr7_3:57759750-57759769 | None:intergenic | 30.0% | |
ATTGTCCTCAACCTATTAAT+AGG | - | chr7_3:57759751-57759770 | None:intergenic | 30.0% | |
GCATATTTAAGTCCTACAAA+AGG | - | chr7_3:57759854-57759873 | None:intergenic | 30.0% | |
AGGACTTAAATATGCTGATA+AGG | + | chr7_3:57759859-57759878 | Msa1112000:intron | 30.0% | |
TGATGAAAGTTATCCTCTAA+TGG | + | chr7_3:57759898-57759917 | Msa1112000:intron | 30.0% | |
! | GTCATTGATAACATTGACAA+GGG | - | chr7_3:57759934-57759953 | None:intergenic | 30.0% |
CTTGTCAATGTTATCAATGA+CGG | + | chr7_3:57759933-57759952 | Msa1112000:intron | 30.0% | |
! | TGATAAAGCATTCAATAAGC+CGG | - | chr7_3:57760544-57760563 | None:intergenic | 30.0% |
GATATGACTATTATACTGAC+TGG | + | chr7_3:57760620-57760639 | Msa1112000:intron | 30.0% | |
ATTAAAGTGGATATTTGGGA+GGG | - | chr7_3:57760667-57760686 | None:intergenic | 30.0% | |
ACATCACATGAACATTAAAG+TGG | - | chr7_3:57760680-57760699 | None:intergenic | 30.0% | |
TAACAAACCTGCAAAGTAAT+AGG | - | chr7_3:57760714-57760733 | None:intergenic | 30.0% | |
TTCCTTTCCTTTATGATAAC+AGG | + | chr7_3:57760749-57760768 | Msa1112000:CDS | 30.0% | |
TTCCTGTTATCATAAAGGAA+AGG | - | chr7_3:57760754-57760773 | None:intergenic | 30.0% | |
AATGCTTCCTGTTATCATAA+AGG | - | chr7_3:57760759-57760778 | None:intergenic | 30.0% | |
GAGAGAAAACATTTAAATCC+AGG | + | chr7_3:57761058-57761077 | Msa1112000:intron | 30.0% | |
TGTTTATTGTGATTCAAAGG+TGG | - | chr7_3:57761125-57761144 | None:intergenic | 30.0% | |
!! | TTAATGGGCTTCTATTTCAT+GGG | - | chr7_3:57761260-57761279 | None:intergenic | 30.0% |
TGTAAATTACATACCCTTTC+CGG | - | chr7_3:57761287-57761306 | None:intergenic | 30.0% | |
! | AAATCATATCTTGGTGTGAT+TGG | - | chr7_3:57761396-57761415 | None:intergenic | 30.0% |
! | TCACACCAAGATATGATTTT+TGG | + | chr7_3:57761397-57761416 | Msa1112000:intron | 30.0% |
!!! | ATTTTTGGTGTGCATAAGAT+TGG | + | chr7_3:57761412-57761431 | Msa1112000:intron | 30.0% |
! | ATTGGTCAATAGTATTGAAC+TGG | + | chr7_3:57761430-57761449 | Msa1112000:intron | 30.0% |
TCATGGTCGAAATGATTTAT+TGG | + | chr7_3:57761610-57761629 | Msa1112000:intron | 30.0% | |
CATGGTCGAAATGATTTATT+GGG | + | chr7_3:57761611-57761630 | Msa1112000:intron | 30.0% | |
TCGAAATGATTTATTGGGTT+TGG | + | chr7_3:57761616-57761635 | Msa1112000:intron | 30.0% | |
AATTTAAATCAGCTTTGCGA+TGG | - | chr7_3:57762010-57762029 | None:intergenic | 30.0% | |
TAAACATGAAAAACAGCAAG+TGG | - | chr7_3:57762340-57762359 | None:intergenic | 30.0% | |
TTGAATAGAAACCTAATGCT+AGG | - | chr7_3:57762597-57762616 | None:intergenic | 30.0% | |
TTAGAAGGTAAACCACAAAA+AGG | + | chr7_3:57762775-57762794 | Msa1112000:CDS | 30.0% | |
! | TCAAAGTTTGAACCTTTTTG+TGG | - | chr7_3:57762790-57762809 | None:intergenic | 30.0% |
CAAAAAGGTTCAAACTTTGA+AGG | + | chr7_3:57762790-57762809 | Msa1112000:CDS | 30.0% | |
! | AAGCAATATCATGATTTTCC+AGG | - | chr7_3:57763152-57763171 | None:intergenic | 30.0% |
! | TGCATGAACTACATTTTATG+TGG | + | chr7_3:57763206-57763225 | Msa1112000:three_prime_UTR | 30.0% |
! | GCATGAACTACATTTTATGT+GGG | + | chr7_3:57763207-57763226 | Msa1112000:three_prime_UTR | 30.0% |
TTATGTGGGATATTATGAAC+TGG | + | chr7_3:57763221-57763240 | Msa1112000:three_prime_UTR | 30.0% | |
GATGTTTCTCTTACCAAATA+AGG | + | chr7_3:57763367-57763386 | Msa1112000:three_prime_UTR | 30.0% | |
!!! | CACTTTTTCACATCCTTATT+TGG | - | chr7_3:57763383-57763402 | None:intergenic | 30.0% |
! | ATAAGGATGTGAAAAAGTGT+AGG | + | chr7_3:57763384-57763403 | Msa1112000:three_prime_UTR | 30.0% |
! | CAGAGGAAGTTTGGAATAAT+CGG | - | chr7_3:57757545-57757564 | None:intergenic | 35.0% |
!! | AATCAAACAGGTTGGTTGTT+CGG | - | chr7_3:57757574-57757593 | None:intergenic | 35.0% |
!! | GAAGCCATTTAGGTTGAAAA+GGG | - | chr7_3:57757686-57757705 | None:intergenic | 35.0% |
TAACACAGAAACTGAATCCA+TGG | - | chr7_3:57757720-57757739 | None:intergenic | 35.0% | |
!! | GGGACCAAAATTGATTTTAG+AGG | - | chr7_3:57758416-57758435 | None:intergenic | 35.0% |
!! | AAAATCAATTTTGGTCCCTC+TGG | + | chr7_3:57758418-57758437 | Msa1112000:intron | 35.0% |
! | TTTGTCTTTTCCCATGTTAG+GGG | + | chr7_3:57758667-57758686 | Msa1112000:intron | 35.0% |
!! | AAGAGCTTTGAGAAAAAGGA+AGG | - | chr7_3:57758735-57758754 | None:intergenic | 35.0% |
TATGTTTGGGAGTTTAGTAG+GGG | - | chr7_3:57758762-57758781 | None:intergenic | 35.0% | |
CTATGTTTGGGAGTTTAGTA+GGG | - | chr7_3:57758763-57758782 | None:intergenic | 35.0% | |
! | ATGTGGATTGTGAACTGTAT+AGG | + | chr7_3:57758956-57758975 | Msa1112000:intron | 35.0% |
TTGTGAACTGTATAGGATCA+TGG | + | chr7_3:57758963-57758982 | Msa1112000:intron | 35.0% | |
!! | AACAAGCTTTGAAGCTACAA+GGG | + | chr7_3:57759072-57759091 | Msa1112000:CDS | 35.0% |
AGTATCTTGCAAAACCACAA+TGG | - | chr7_3:57759135-57759154 | None:intergenic | 35.0% | |
TTCAGAACAGTTGAAGATAC+AGG | + | chr7_3:57759154-57759173 | Msa1112000:CDS | 35.0% | |
CAAATCATGTCTTGCCTTAT+CGG | - | chr7_3:57759180-57759199 | None:intergenic | 35.0% | |
! | AAGACATGATTTGAGTGTTG+TGG | + | chr7_3:57759187-57759206 | Msa1112000:CDS | 35.0% |
CAGCCATAAATACATACCAT+AGG | - | chr7_3:57759360-57759379 | None:intergenic | 35.0% | |
GAATAAATGTGGCTGAATTG+TGG | + | chr7_3:57759541-57759560 | Msa1112000:intron | 35.0% | |
TAGTCCGTGGTTTCAATTTA+CGG | - | chr7_3:57759629-57759648 | None:intergenic | 35.0% | |
!! | TGTTGTTGGCTAAAGTTTTG+TGG | + | chr7_3:57759662-57759681 | Msa1112000:intron | 35.0% |
GATTCTATACCGACACATTT+AGG | + | chr7_3:57759718-57759737 | Msa1112000:intron | 35.0% | |
TAGGCTAAGTCCCTATTAAT+AGG | + | chr7_3:57759737-57759756 | Msa1112000:intron | 35.0% | |
AAGTCCCTATTAATAGGTTG+AGG | + | chr7_3:57759743-57759762 | Msa1112000:intron | 35.0% | |
ACTTGATCATCTTCACATGT+TGG | + | chr7_3:57759776-57759795 | Msa1112000:intron | 35.0% | |
CTTGATCATCTTCACATGTT+GGG | + | chr7_3:57759777-57759796 | Msa1112000:intron | 35.0% | |
AAATCGTAATCCCCATTAGT+AGG | - | chr7_3:57759813-57759832 | None:intergenic | 35.0% | |
!!! | GATAAGGATTAGCCTTTTGT+AGG | + | chr7_3:57759839-57759858 | Msa1112000:intron | 35.0% |
AAAGTTATCCTCTAATGGAG+AGG | + | chr7_3:57759903-57759922 | Msa1112000:intron | 35.0% | |
! | CGTCATTGATAACATTGACA+AGG | - | chr7_3:57759935-57759954 | None:intergenic | 35.0% |
ATGCCTATATTATCTGCCAT+AGG | - | chr7_3:57760013-57760032 | None:intergenic | 35.0% | |
TGGCAGATAATATAGGCATA+TGG | + | chr7_3:57760014-57760033 | Msa1112000:intron | 35.0% | |
ATAATGCCATGTCAGCAATT+TGG | + | chr7_3:57760060-57760079 | Msa1112000:intron | 35.0% | |
ATCAGTCCTTACTCCTTATA+AGG | - | chr7_3:57760096-57760115 | None:intergenic | 35.0% | |
TTTGACTACCATAATATGGC+CGG | + | chr7_3:57760522-57760541 | Msa1112000:intron | 35.0% | |
CATTAAAGTGGATATTTGGG+AGG | - | chr7_3:57760668-57760687 | None:intergenic | 35.0% | |
TGATACTCCTATTACTTTGC+AGG | + | chr7_3:57760704-57760723 | Msa1112000:intron | 35.0% | |
!! | ATAAGGTTTGGGGTGATTTT+AGG | + | chr7_3:57760785-57760804 | Msa1112000:CDS | 35.0% |
CATACTATTGCAAACGTTAG+AGG | - | chr7_3:57760991-57761010 | None:intergenic | 35.0% | |
ATCTCCTACCTAAGATTGAA+AGG | + | chr7_3:57761034-57761053 | Msa1112000:intron | 35.0% | |
TCTCCTACCTAAGATTGAAA+GGG | + | chr7_3:57761035-57761054 | Msa1112000:intron | 35.0% | |
GAGAAAATATAAGTGGAGAC+CGG | + | chr7_3:57761205-57761224 | Msa1112000:intron | 35.0% | |
! | GACTATAGTCCTCTATTTTC+CGG | - | chr7_3:57761227-57761246 | None:intergenic | 35.0% |
!! | CTTAATGGGCTTCTATTTCA+TGG | - | chr7_3:57761261-57761280 | None:intergenic | 35.0% |
ATAGAAGCCCATTAAGTAAC+CGG | + | chr7_3:57761265-57761284 | Msa1112000:intron | 35.0% | |
! | GGAAAGGGTATGTAATTTAC+AGG | + | chr7_3:57761286-57761305 | Msa1112000:intron | 35.0% |
TAGGATGACCTAGAATACTT+GGG | - | chr7_3:57761371-57761390 | None:intergenic | 35.0% | |
GCACACCAAAAATCATATCT+TGG | - | chr7_3:57761405-57761424 | None:intergenic | 35.0% | |
TCAACGCATCCAATTATCAT+TGG | + | chr7_3:57761500-57761519 | Msa1112000:intron | 35.0% | |
TTTGAAGAAAACCCCCTTAT+TGG | - | chr7_3:57761579-57761598 | None:intergenic | 35.0% | |
! | GAAATCGTAAAAGTATGGGT+TGG | + | chr7_3:57761684-57761703 | Msa1112000:intron | 35.0% |
AACAAGTGCAAGCTAGTAAT+TGG | - | chr7_3:57761715-57761734 | None:intergenic | 35.0% | |
!! | AAGGCACATATAAGTATCGA+TGG | - | chr7_3:57761902-57761921 | None:intergenic | 35.0% |
TGTTTAGAGAGCTGGATAAA+AGG | - | chr7_3:57761921-57761940 | None:intergenic | 35.0% | |
!! | AGTGAAATAAGTTGATCCCT+GGG | - | chr7_3:57762196-57762215 | None:intergenic | 35.0% |
CTTATTTCACTGCTTTGATC+AGG | + | chr7_3:57762205-57762224 | Msa1112000:CDS | 35.0% | |
TTGAGATTATCGGTAAAGGT+TGG | - | chr7_3:57762317-57762336 | None:intergenic | 35.0% | |
TTCCTACTTGACATTGCATT+TGG | + | chr7_3:57762466-57762485 | Msa1112000:intron | 35.0% | |
ACTGGCAAATAATTGCTAGT+TGG | + | chr7_3:57762489-57762508 | Msa1112000:intron | 35.0% | |
! | GGCATTTTATGTCTATAGAC+TGG | + | chr7_3:57762750-57762769 | Msa1112000:CDS | 35.0% |
!!! | GTCTATAGACTGGTTTTAGA+AGG | + | chr7_3:57762760-57762779 | Msa1112000:CDS | 35.0% |
AGGAAACTAGTTCAGTGATA+AGG | + | chr7_3:57762819-57762838 | Msa1112000:exon | 35.0% | |
! | AGGAAGTTTGGAATAATCGG+TGG | - | chr7_3:57757542-57757561 | None:intergenic | 40.0% |
GAAAACGAGAGTTTGGGAAT+TGG | - | chr7_3:57757659-57757678 | None:intergenic | 40.0% | |
! | TTCGCCCTTTTCAACCTAAA+TGG | + | chr7_3:57757679-57757698 | Msa1112000:exon | 40.0% |
!! | CGAAGCCATTTAGGTTGAAA+AGG | - | chr7_3:57757687-57757706 | None:intergenic | 40.0% |
GAAACTCATCGAAGCCATTT+AGG | - | chr7_3:57757696-57757715 | None:intergenic | 40.0% | |
! | AGAGTTTGAAAGTGGTGTTG+CGG | - | chr7_3:57757805-57757824 | None:intergenic | 40.0% |
AGGAAGAGAGAGTTTGAAAG+TGG | - | chr7_3:57757813-57757832 | None:intergenic | 40.0% | |
CATGACTCTGTAAGTCCAAA+AGG | + | chr7_3:57757896-57757915 | Msa1112000:intron | 40.0% | |
! | TCTGGCTAAAAGTGAGTTGA+AGG | + | chr7_3:57758251-57758270 | Msa1112000:intron | 40.0% |
! | GTTTTTCTGCAGCTCTGTTT+GGG | + | chr7_3:57758440-57758459 | Msa1112000:intron | 40.0% |
!!! | AATGTTTTAGGGGAGGGTTT+AGG | - | chr7_3:57758645-57758664 | None:intergenic | 40.0% |
!! | AGGGAAGAGCTTTGAGAAAA+AGG | - | chr7_3:57758739-57758758 | None:intergenic | 40.0% |
GCTATGTTTGGGAGTTTAGT+AGG | - | chr7_3:57758764-57758783 | None:intergenic | 40.0% | |
TGCTACTACTAGGTTGTCTT+GGG | - | chr7_3:57758795-57758814 | None:intergenic | 40.0% | |
ATGCTACTACTAGGTTGTCT+TGG | - | chr7_3:57758796-57758815 | None:intergenic | 40.0% | |
ATAGGATCATGGTGAAGTTG+AGG | + | chr7_3:57758974-57758993 | Msa1112000:intron | 40.0% | |
!! | GAATGATGTTAGTTCTGAGG+AGG | + | chr7_3:57759007-57759026 | Msa1112000:CDS | 40.0% |
!! | GAACAAGCTTTGAAGCTACA+AGG | + | chr7_3:57759071-57759090 | Msa1112000:CDS | 40.0% |
!! | ACAAGCTTTGAAGCTACAAG+GGG | + | chr7_3:57759073-57759092 | Msa1112000:CDS | 40.0% |
! | GTATTCTAAGAAGGCCATTG+TGG | + | chr7_3:57759118-57759137 | Msa1112000:CDS | 40.0% |
TTTGCTGAGATCATCATCTG+GGG | - | chr7_3:57759303-57759322 | None:intergenic | 40.0% | |
CTTTGCTGAGATCATCATCT+GGG | - | chr7_3:57759304-57759323 | None:intergenic | 40.0% | |
ACTTTGCTGAGATCATCATC+TGG | - | chr7_3:57759305-57759324 | None:intergenic | 40.0% | |
GATGATCTCAGCAAAGTTTC+TGG | + | chr7_3:57759308-57759327 | Msa1112000:CDS | 40.0% | |
!! | TCAGCAAAGTTTCTGGAGTT+CGG | + | chr7_3:57759315-57759334 | Msa1112000:CDS | 40.0% |
GCGGCTGCAATATCATTATT+TGG | - | chr7_3:57759591-57759610 | None:intergenic | 40.0% | |
TCGACCGTAAATTGAAACCA+CGG | + | chr7_3:57759622-57759641 | Msa1112000:intron | 40.0% | |
!! | TGTTGGCTAAAGTTTTGTGG+CGG | + | chr7_3:57759665-57759684 | Msa1112000:intron | 40.0% |
!! | GAGGTATTGCTCCTACTAAT+GGG | + | chr7_3:57759799-57759818 | Msa1112000:intron | 40.0% |
! | AGGTATTGCTCCTACTAATG+GGG | + | chr7_3:57759800-57759819 | Msa1112000:intron | 40.0% |
AAATATGGCATTGTGGCCTA+TGG | + | chr7_3:57759994-57760013 | Msa1112000:intron | 40.0% | |
TGGCCTATGGCAGATAATAT+AGG | + | chr7_3:57760007-57760026 | Msa1112000:intron | 40.0% | |
GTTGTTGACACAATCAGTCA+TGG | + | chr7_3:57760036-57760055 | Msa1112000:intron | 40.0% | |
TCCTTACTCCTTATAAGGAC+CGG | - | chr7_3:57760091-57760110 | None:intergenic | 40.0% | |
TGATGTTGTGGGTGTCTTTA+TGG | + | chr7_3:57760112-57760131 | Msa1112000:intron | 40.0% | |
TGGGTGTCTTTATGGATGTT+GGG | + | chr7_3:57760120-57760139 | Msa1112000:intron | 40.0% | |
CGTTGAATTGTATGCGCTTT+CGG | + | chr7_3:57760186-57760205 | Msa1112000:intron | 40.0% | |
TCAATAAGCCGGCCATATTA+TGG | - | chr7_3:57760533-57760552 | None:intergenic | 40.0% | |
!! | TGCAGGTTTGTTACTATCTG+CGG | + | chr7_3:57760721-57760740 | Msa1112000:intron | 40.0% |
AGCATTGCAGCAATAAGGTT+TGG | + | chr7_3:57760773-57760792 | Msa1112000:CDS | 40.0% | |
GCATTGCAGCAATAAGGTTT+GGG | + | chr7_3:57760774-57760793 | Msa1112000:CDS | 40.0% | |
CATTGCAGCAATAAGGTTTG+GGG | + | chr7_3:57760775-57760794 | Msa1112000:CDS | 40.0% | |
!! | GATTTTAGGTGGTGTGCTAT+TGG | + | chr7_3:57760799-57760818 | Msa1112000:CDS | 40.0% |
AGCATATGATCTTACCTGTC+TGG | - | chr7_3:57760889-57760908 | None:intergenic | 40.0% | |
CTCCTACCTAAGATTGAAAG+GGG | + | chr7_3:57761036-57761055 | Msa1112000:intron | 40.0% | |
TTCTCTCCCCTTTCAATCTT+AGG | - | chr7_3:57761045-57761064 | None:intergenic | 40.0% | |
ACCCTTTCCGGTTACTTAAT+GGG | - | chr7_3:57761275-57761294 | None:intergenic | 40.0% | |
TACCCTTTCCGGTTACTTAA+TGG | - | chr7_3:57761276-57761295 | None:intergenic | 40.0% | |
GTAGGATGACCTAGAATACT+TGG | - | chr7_3:57761372-57761391 | None:intergenic | 40.0% | |
! | TATCTTGGTGTGATTGGTGT+AGG | - | chr7_3:57761390-57761409 | None:intergenic | 40.0% |
! | GGTCAATAGTATTGAACTGG+AGG | + | chr7_3:57761433-57761452 | Msa1112000:intron | 40.0% |
! | GTTGATGTTGTTTAGAGAGC+TGG | - | chr7_3:57761929-57761948 | None:intergenic | 40.0% |
!!! | CTCTTGTTTTCCTTTTCCCA+GGG | + | chr7_3:57762177-57762196 | Msa1112000:intron | 40.0% |
!! | ATAAGTTGATCCCTGGGAAA+AGG | - | chr7_3:57762190-57762209 | None:intergenic | 40.0% |
!! | CAGTGAAATAAGTTGATCCC+TGG | - | chr7_3:57762197-57762216 | None:intergenic | 40.0% |
ATTATCGGTAAAGGTTGGCA+TGG | - | chr7_3:57762312-57762331 | None:intergenic | 40.0% | |
GTGGTTGAGATTATCGGTAA+AGG | - | chr7_3:57762321-57762340 | None:intergenic | 40.0% | |
CAGCAAGTGGTTGAGATTAT+CGG | - | chr7_3:57762327-57762346 | None:intergenic | 40.0% | |
GTCCAAATGCAATGTCAAGT+AGG | - | chr7_3:57762471-57762490 | None:intergenic | 40.0% | |
ACTTGACATTGCATTTGGAC+TGG | + | chr7_3:57762471-57762490 | Msa1112000:intron | 40.0% | |
CAGAAAACTCACCTAGCATT+AGG | + | chr7_3:57762583-57762602 | Msa1112000:intron | 40.0% | |
TATTCAACCTGCAGAAATGC+AGG | + | chr7_3:57762610-57762629 | Msa1112000:intron | 40.0% | |
! | ACTTTGTTTGGCATTTGCAG+TGG | + | chr7_3:57762718-57762737 | Msa1112000:intron | 40.0% |
! | TCAAACTTTGAAGGTGAAGC+AGG | + | chr7_3:57762799-57762818 | Msa1112000:CDS | 40.0% |
TTTCTTTGATATTCGCAGGC+CGG | + | chr7_3:57763068-57763087 | Msa1112000:intron | 40.0% | |
TTGCTGATGGTTAGGATTAG+TGG | + | chr7_3:57763105-57763124 | Msa1112000:three_prime_UTR | 40.0% | |
! | TGGTTAGGATTAGTGGTTCA+TGG | + | chr7_3:57763112-57763131 | Msa1112000:three_prime_UTR | 40.0% |
! | GGTTAGGATTAGTGGTTCAT+GGG | + | chr7_3:57763113-57763132 | Msa1112000:three_prime_UTR | 40.0% |
AGTGAAGACTGAAGAATGCA+AGG | - | chr7_3:57763275-57763294 | None:intergenic | 40.0% | |
TTTACATGCTTACTTGAGCC+TGG | + | chr7_3:57763318-57763337 | Msa1112000:three_prime_UTR | 40.0% | |
TTACATGCTTACTTGAGCCT+GGG | + | chr7_3:57763319-57763338 | Msa1112000:three_prime_UTR | 40.0% | |
! | GTTAGTTACTTTACAACCCC+AGG | - | chr7_3:57763339-57763358 | None:intergenic | 40.0% |
!! | GGTTTTGTCACGTGTGTGTT+GGG | - | chr7_3:57757521-57757540 | None:intergenic | 45.0% |
!!! | TGGTTTTGTCACGTGTGTGT+TGG | - | chr7_3:57757522-57757541 | None:intergenic | 45.0% |
CGGAAAATGCAGAGGAAGTT+TGG | - | chr7_3:57757554-57757573 | None:intergenic | 45.0% | |
TGGTTGTTCGGAAAATGCAG+AGG | - | chr7_3:57757562-57757581 | None:intergenic | 45.0% | |
GGCGAAGAAAACGAGAGTTT+GGG | - | chr7_3:57757665-57757684 | None:intergenic | 45.0% | |
GATGGGTGTGGTTGAGTTTA+GGG | - | chr7_3:57757745-57757764 | None:intergenic | 45.0% | |
AGATGGGTGTGGTTGAGTTT+AGG | - | chr7_3:57757746-57757765 | None:intergenic | 45.0% | |
CTTCGGAGAATGAGAGAGAT+GGG | - | chr7_3:57757762-57757781 | None:intergenic | 45.0% | |
ACTTCGGAGAATGAGAGAGA+TGG | - | chr7_3:57757763-57757782 | None:intergenic | 45.0% | |
GTGTTGCGGTGTTTGAGTAA+AGG | - | chr7_3:57757791-57757810 | None:intergenic | 45.0% | |
GGACTTACAGAGTCATGTTG+AGG | - | chr7_3:57757893-57757912 | None:intergenic | 45.0% | |
AGAGCTGCAGAAAAACCAGA+GGG | - | chr7_3:57758436-57758455 | None:intergenic | 45.0% | |
! | GGTTTTTCTGCAGCTCTGTT+TGG | + | chr7_3:57758439-57758458 | Msa1112000:intron | 45.0% |
TTTGGGAGTTTAGTAGGGGA+GGG | - | chr7_3:57758758-57758777 | None:intergenic | 45.0% | |
GGGAGATGAAGGCTATGTTT+GGG | - | chr7_3:57758775-57758794 | None:intergenic | 45.0% | |
TGGGAGATGAAGGCTATGTT+TGG | - | chr7_3:57758776-57758795 | None:intergenic | 45.0% | |
TAGGTTGTCTTGGGAGATGA+AGG | - | chr7_3:57758786-57758805 | None:intergenic | 45.0% | |
TGGTGAAGTTGAGGTAGAGA+AGG | + | chr7_3:57758983-57759002 | Msa1112000:CDS | 45.0% | |
GGTGAAGTTGAGGTAGAGAA+GGG | + | chr7_3:57758984-57759003 | Msa1112000:CDS | 45.0% | |
GTGAAGTTGAGGTAGAGAAG+GGG | + | chr7_3:57758985-57759004 | Msa1112000:CDS | 45.0% | |
!! | GGGGAATGATGTTAGTTCTG+AGG | + | chr7_3:57759004-57759023 | Msa1112000:CDS | 45.0% |
!! | TAGTTCTGAGGAGGAATCAC+AGG | + | chr7_3:57759016-57759035 | Msa1112000:CDS | 45.0% |
!! | GCAGGCTTTGGATACATTCA+AGG | + | chr7_3:57759049-57759068 | Msa1112000:CDS | 45.0% |
GTTGAAGATACAGGCCGATA+AGG | + | chr7_3:57759163-57759182 | Msa1112000:CDS | 45.0% | |
! | TGATTTGAGTGTTGTGGCGA+AGG | + | chr7_3:57759193-57759212 | Msa1112000:CDS | 45.0% |
GCGAAGGAAATCACTGAAGA+AGG | + | chr7_3:57759209-57759228 | Msa1112000:CDS | 45.0% | |
TGAGAATTCACCTGAGGTGA+AGG | + | chr7_3:57759256-57759275 | Msa1112000:CDS | 45.0% | |
ACCTGAGGTGAAGGAAATTG+TGG | + | chr7_3:57759265-57759284 | Msa1112000:CDS | 45.0% | |
TCCACAATTTCCTTCACCTC+AGG | - | chr7_3:57759269-57759288 | None:intergenic | 45.0% | |
!! | CAGCAAAGTTTCTGGAGTTC+GGG | + | chr7_3:57759316-57759335 | Msa1112000:CDS | 45.0% |
! | GGAGTTCGGGACTTTTATGT+TGG | + | chr7_3:57759329-57759348 | Msa1112000:CDS | 45.0% |
GCTGAATTGTGGTTACGATG+CGG | + | chr7_3:57759552-57759571 | Msa1112000:intron | 45.0% | |
GGGACTTAGCCTAAATGTGT+CGG | - | chr7_3:57759730-57759749 | None:intergenic | 45.0% | |
GATCATCTTCACATGTTGGG+AGG | + | chr7_3:57759780-57759799 | Msa1112000:intron | 45.0% | |
!! | GGAGGTATTGCTCCTACTAA+TGG | + | chr7_3:57759798-57759817 | Msa1112000:intron | 45.0% |
!! | CAATGACGGACGACAGATTA+TGG | + | chr7_3:57759947-57759966 | Msa1112000:intron | 45.0% |
GTGTTGCCAAATTGCTGACA+TGG | - | chr7_3:57760069-57760088 | None:intergenic | 45.0% | |
TGTCAGCAATTTGGCAACAC+CGG | + | chr7_3:57760069-57760088 | Msa1112000:intron | 45.0% | |
ACCGGTCCTTATAAGGAGTA+AGG | + | chr7_3:57760087-57760106 | Msa1112000:intron | 45.0% | |
AGGAGTAAGGACTGATGTTG+TGG | + | chr7_3:57760100-57760119 | Msa1112000:intron | 45.0% | |
GGAGTAAGGACTGATGTTGT+GGG | + | chr7_3:57760101-57760120 | Msa1112000:intron | 45.0% | |
GTGGGTGTCTTTATGGATGT+TGG | + | chr7_3:57760119-57760138 | Msa1112000:intron | 45.0% | |
GATGTTGGGCTGATGTAACA+GGG | + | chr7_3:57760134-57760153 | Msa1112000:intron | 45.0% | |
!! | GCAGGTTTGTTACTATCTGC+GGG | + | chr7_3:57760722-57760741 | Msa1112000:intron | 45.0% |
!! | CAGGAAGCATTGCAGCAATA+AGG | + | chr7_3:57760768-57760787 | Msa1112000:CDS | 45.0% |
!! | AGGTTTGGGGTGATTTTAGG+TGG | + | chr7_3:57760788-57760807 | Msa1112000:CDS | 45.0% |
CCCTTCAAAGCAAGAGAAGA+GGG | - | chr7_3:57760866-57760885 | None:intergenic | 45.0% | |
! | CCCTCTTCTCTTGCTTTGAA+GGG | + | chr7_3:57760863-57760882 | Msa1112000:CDS | 45.0% |
CTCCCCTTTCAATCTTAGGT+AGG | - | chr7_3:57761041-57761060 | None:intergenic | 45.0% | |
AAGTGGAGACCGGAAAATAG+AGG | + | chr7_3:57761215-57761234 | Msa1112000:intron | 45.0% | |
CTTCTATTTCATGGGACCGT+GGG | - | chr7_3:57761252-57761271 | None:intergenic | 45.0% | |
AGCCCATTAAGTAACCGGAA+AGG | + | chr7_3:57761270-57761289 | Msa1112000:intron | 45.0% | |
GCCCATTAAGTAACCGGAAA+GGG | + | chr7_3:57761271-57761290 | Msa1112000:intron | 45.0% | |
ACCTTTACTGCAGGTCTAGT+GGG | - | chr7_3:57761315-57761334 | None:intergenic | 45.0% | |
! | TAGACCTGCAGTAAAGGTGT+GGG | + | chr7_3:57761317-57761336 | Msa1112000:intron | 45.0% |
ACCTAGAATACTTGGGCGAT+TGG | - | chr7_3:57761364-57761383 | None:intergenic | 45.0% | |
CTGCGTGAGATCAGCATATT+AGG | + | chr7_3:57762067-57762086 | Msa1112000:CDS | 45.0% | |
!!! | GCTCTTGTTTTCCTTTTCCC+AGG | + | chr7_3:57762176-57762195 | Msa1112000:intron | 45.0% |
TGTTCAACCTGCATTTCTGC+AGG | - | chr7_3:57762620-57762639 | None:intergenic | 45.0% | |
TTCTTTGATATTCGCAGGCC+GGG | + | chr7_3:57763069-57763088 | Msa1112000:intron | 45.0% | |
AAGACTCGTTGCTGATGGTT+AGG | + | chr7_3:57763097-57763116 | Msa1112000:three_prime_UTR | 45.0% | |
! | TAGGATTAGTGGTTCATGGG+TGG | + | chr7_3:57763116-57763135 | Msa1112000:three_prime_UTR | 45.0% |
TACATGCTTACTTGAGCCTG+GGG | + | chr7_3:57763320-57763339 | Msa1112000:three_prime_UTR | 45.0% | |
!!! | TATTTATATGATAAATTTTT+TGG | - | chr7_3:57759979-57759998 | None:intergenic | 5.0% |
!! | AAAAATTTATCATATAAATA+TGG | + | chr7_3:57759979-57759998 | Msa1112000:intron | 5.0% |
GGGCGAAGAAAACGAGAGTT+TGG | - | chr7_3:57757666-57757685 | None:intergenic | 50.0% | |
GGCTTCGATGAGTTTCACCA+TGG | + | chr7_3:57757700-57757719 | Msa1112000:CDS | 50.0% | |
GAGAATGAGAGAGATGGGTG+TGG | - | chr7_3:57757757-57757776 | None:intergenic | 50.0% | |
! | CGTTGATTGAGGGCATAACG+AGG | - | chr7_3:57757833-57757852 | None:intergenic | 50.0% |
!! | CGGTTTGCTGCGTTGATTGA+GGG | - | chr7_3:57757843-57757862 | None:intergenic | 50.0% |
!! | ACGGTTTGCTGCGTTGATTG+AGG | - | chr7_3:57757844-57757863 | None:intergenic | 50.0% |
GCAGCGAAAACGAGGGTTAA+CGG | - | chr7_3:57757863-57757882 | None:intergenic | 50.0% | |
CAGAGCTGCAGAAAAACCAG+AGG | - | chr7_3:57758437-57758456 | None:intergenic | 50.0% | |
TGCAGCTCTGTTTGGGAGTT+TGG | + | chr7_3:57758447-57758466 | Msa1112000:intron | 50.0% | |
AGCTCTGTTTGGGAGTTTGG+AGG | + | chr7_3:57758450-57758469 | Msa1112000:intron | 50.0% | |
GCTCTGTTTGGGAGTTTGGA+GGG | + | chr7_3:57758451-57758470 | Msa1112000:intron | 50.0% | |
CTCTGTTTGGGAGTTTGGAG+GGG | + | chr7_3:57758452-57758471 | Msa1112000:intron | 50.0% | |
GTTTGGGAGTTTAGTAGGGG+AGG | - | chr7_3:57758759-57758778 | None:intergenic | 50.0% | |
AGGAGGAATCACAGGAAGCA+TGG | + | chr7_3:57759024-57759043 | Msa1112000:CDS | 50.0% | |
! | ATCACAGGAAGCATGGAAGC+AGG | + | chr7_3:57759031-57759050 | Msa1112000:CDS | 50.0% |
TGCTGCTGAGAATTCACCTG+AGG | + | chr7_3:57759250-57759269 | Msa1112000:CDS | 50.0% | |
ACGGTCGATGACAGCAATTG+CGG | - | chr7_3:57759610-57759629 | None:intergenic | 50.0% | |
!! | TGGCTAAAGTTTTGTGGCGG+CGG | + | chr7_3:57759668-57759687 | Msa1112000:intron | 50.0% |
GGGCTTTACCTCTCCATTAG+AGG | - | chr7_3:57759914-57759933 | None:intergenic | 50.0% | |
TGGCAACACCGGTCCTTATA+AGG | + | chr7_3:57760080-57760099 | Msa1112000:intron | 50.0% | |
GGATGTTGGGCTGATGTAAC+AGG | + | chr7_3:57760133-57760152 | Msa1112000:intron | 50.0% | |
!! | GGTTTGTTACTATCTGCGGG+TGG | + | chr7_3:57760725-57760744 | Msa1112000:intron | 50.0% |
GCCCTCTTCTCTTGCTTTGA+AGG | + | chr7_3:57760862-57760881 | Msa1112000:CDS | 50.0% | |
GCCCTTCAAAGCAAGAGAAG+AGG | - | chr7_3:57760867-57760886 | None:intergenic | 50.0% | |
TAGTAGGGTCTTCCGATTCC+TGG | - | chr7_3:57761079-57761098 | None:intergenic | 50.0% | |
AGAGGACTATAGTCAGCCCA+CGG | + | chr7_3:57761233-57761252 | Msa1112000:intron | 50.0% | |
GCTTCTATTTCATGGGACCG+TGG | - | chr7_3:57761253-57761272 | None:intergenic | 50.0% | |
ACCCACTAGACCTGCAGTAA+AGG | + | chr7_3:57761311-57761330 | Msa1112000:intron | 50.0% | |
CACCTTTACTGCAGGTCTAG+TGG | - | chr7_3:57761316-57761335 | None:intergenic | 50.0% | |
CTAGACCTGCAGTAAAGGTG+TGG | + | chr7_3:57761316-57761335 | Msa1112000:intron | 50.0% | |
ATTGGCAGGCTTCTGCAATC+AGG | - | chr7_3:57761346-57761365 | None:intergenic | 50.0% | |
AGAATACTTGGGCGATTGGC+AGG | - | chr7_3:57761360-57761379 | None:intergenic | 50.0% | |
GCCAATCGCCCAAGTATTCT+AGG | + | chr7_3:57761360-57761379 | Msa1112000:intron | 50.0% | |
GTTTGGCATTTGCAGTGGTG+CGG | + | chr7_3:57762723-57762742 | Msa1112000:intron | 50.0% | |
TCGTCAAGACTCGTTGCTGA+TGG | + | chr7_3:57763092-57763111 | Msa1112000:three_prime_UTR | 50.0% | |
ATGGGTGGAAAAATCGAGCC+TGG | + | chr7_3:57763131-57763150 | Msa1112000:three_prime_UTR | 50.0% | |
CGTAGCAGCAGCGAAAACGA+GGG | - | chr7_3:57757870-57757889 | None:intergenic | 55.0% | |
GGAGTTTGGAGGGGAGTAGA+GGG | + | chr7_3:57758461-57758480 | Msa1112000:intron | 55.0% | |
! | GGAAGCATGGAAGCAGGCTT+TGG | + | chr7_3:57759037-57759056 | Msa1112000:CDS | 55.0% |
GCTGAGATCATCATCTGGGG+AGG | - | chr7_3:57759300-57759319 | None:intergenic | 55.0% | |
GGCTGATGTAACAGGGCTCA+TGG | + | chr7_3:57760141-57760160 | Msa1112000:intron | 55.0% | |
!! | CTTGCTTTGAAGGGCCAGAC+AGG | + | chr7_3:57760872-57760891 | Msa1112000:CDS | 55.0% |
GATGCCCACACCTTTACTGC+AGG | - | chr7_3:57761324-57761343 | None:intergenic | 55.0% | |
GTTGGGCTTGCAGCTATAGC+AGG | + | chr7_3:57762034-57762053 | Msa1112000:intron | 55.0% | |
CATTTGCAGTGGTGCGGTAG+CGG | + | chr7_3:57762729-57762748 | Msa1112000:intron | 55.0% | |
AGCAACGAGTCTTGACGACC+CGG | - | chr7_3:57763090-57763109 | None:intergenic | 55.0% | |
GCGTAGCAGCAGCGAAAACG+AGG | - | chr7_3:57757871-57757890 | None:intergenic | 60.0% | |
GGGAGTTTGGAGGGGAGTAG+AGG | + | chr7_3:57758460-57758479 | Msa1112000:intron | 60.0% | |
TGGAGGGGAGTAGAGGGCTT+TGG | + | chr7_3:57758467-57758486 | Msa1112000:intron | 60.0% | |
GGAGGGGAGTAGAGGGCTTT+GGG | + | chr7_3:57758468-57758487 | Msa1112000:intron | 60.0% | |
GAGGGGAGTAGAGGGCTTTG+GGG | + | chr7_3:57758469-57758488 | Msa1112000:intron | 60.0% | |
! | AGGGGAGTAGAGGGCTTTGG+GGG | + | chr7_3:57758470-57758489 | Msa1112000:intron | 60.0% |
!! | AGTAGAGGGCTTTGGGGGGA+GGG | + | chr7_3:57758475-57758494 | Msa1112000:intron | 60.0% |
!! | GGGGAGTAGAGGGCTTTGGG+GGG | + | chr7_3:57758471-57758490 | Msa1112000:intron | 65.0% |
!! | GAGTAGAGGGCTTTGGGGGG+AGG | + | chr7_3:57758474-57758493 | Msa1112000:intron | 65.0% |
!! | GTAGAGGGCTTTGGGGGGAG+GGG | + | chr7_3:57758476-57758495 | Msa1112000:intron | 65.0% |
! | CTTTGGGGGGAGGGGAAGAG+AGG | + | chr7_3:57758484-57758503 | Msa1112000:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 57757517 | 57763466 | 57757517 | ID=Msa1112000;Name=Msa1112000 |
chr7_3 | mRNA | 57757517 | 57763466 | 57757517 | ID=Msa1112000-mRNA-1;Parent=Msa1112000;Name=Msa1112000-mRNA-1;_AED=0.02;_eAED=0.02;_QI=181|1|1|1|0.57|0.62|8|471|308 |
chr7_3 | exon | 57757517 | 57757904 | 57757517 | ID=Msa1112000-mRNA-1:exon:12561;Parent=Msa1112000-mRNA-1 |
chr7_3 | exon | 57758978 | 57759362 | 57758978 | ID=Msa1112000-mRNA-1:exon:12562;Parent=Msa1112000-mRNA-1 |
chr7_3 | exon | 57760726 | 57760893 | 57760726 | ID=Msa1112000-mRNA-1:exon:12563;Parent=Msa1112000-mRNA-1 |
chr7_3 | exon | 57762047 | 57762093 | 57762047 | ID=Msa1112000-mRNA-1:exon:12564;Parent=Msa1112000-mRNA-1 |
chr7_3 | exon | 57762198 | 57762226 | 57762198 | ID=Msa1112000-mRNA-1:exon:12565;Parent=Msa1112000-mRNA-1 |
chr7_3 | exon | 57762738 | 57762840 | 57762738 | ID=Msa1112000-mRNA-1:exon:12566;Parent=Msa1112000-mRNA-1 |
chr7_3 | exon | 57762980 | 57763062 | 57762980 | ID=Msa1112000-mRNA-1:exon:12567;Parent=Msa1112000-mRNA-1 |
chr7_3 | exon | 57763091 | 57763466 | 57763091 | ID=Msa1112000-mRNA-1:exon:12568;Parent=Msa1112000-mRNA-1 |
chr7_3 | five_prime_UTR | 57757517 | 57757697 | 57757517 | ID=Msa1112000-mRNA-1:five_prime_utr;Parent=Msa1112000-mRNA-1 |
chr7_3 | CDS | 57757698 | 57757904 | 57757698 | ID=Msa1112000-mRNA-1:cds;Parent=Msa1112000-mRNA-1 |
chr7_3 | CDS | 57758978 | 57759362 | 57758978 | ID=Msa1112000-mRNA-1:cds;Parent=Msa1112000-mRNA-1 |
chr7_3 | CDS | 57760726 | 57760893 | 57760726 | ID=Msa1112000-mRNA-1:cds;Parent=Msa1112000-mRNA-1 |
chr7_3 | CDS | 57762047 | 57762093 | 57762047 | ID=Msa1112000-mRNA-1:cds;Parent=Msa1112000-mRNA-1 |
chr7_3 | CDS | 57762198 | 57762226 | 57762198 | ID=Msa1112000-mRNA-1:cds;Parent=Msa1112000-mRNA-1 |
chr7_3 | CDS | 57762738 | 57762828 | 57762738 | ID=Msa1112000-mRNA-1:cds;Parent=Msa1112000-mRNA-1 |
chr7_3 | three_prime_UTR | 57762829 | 57762840 | 57762829 | ID=Msa1112000-mRNA-1:three_prime_utr;Parent=Msa1112000-mRNA-1 |
chr7_3 | three_prime_UTR | 57762980 | 57763062 | 57762980 | ID=Msa1112000-mRNA-1:three_prime_utr;Parent=Msa1112000-mRNA-1 |
chr7_3 | three_prime_UTR | 57763091 | 57763466 | 57763091 | ID=Msa1112000-mRNA-1:three_prime_utr;Parent=Msa1112000-mRNA-1 |
Gene Sequence |
Protein sequence |