AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0043240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043240 MtrunA17_Chr1g0209151 97.078 753 16 2 1 749 1 751 0.0 1454
Msa0043240 MtrunA17_Chr6g0483611 36.808 777 309 32 14 749 4 639 9.94e-100 321
Msa0043240 MtrunA17_Chr8g0392371 38.137 451 167 22 26 468 18 364 2.98e-54 197
Msa0043240 MtrunA17_Chr4g0048541 47.959 196 89 6 24 216 6 191 2.36e-46 171
Msa0043240 MtrunA17_Chr2g0279951 46.099 141 65 3 27 159 8 145 2.96e-32 130
Msa0043240 MtrunA17_Chr4g0049441 47.143 140 61 5 27 159 9 142 1.10e-29 123
Msa0043240 MtrunA17_Chr2g0305141 40.719 167 82 5 54 211 170 328 1.06e-26 117
Msa0043240 MtrunA17_Chr2g0277031 35.669 157 74 4 53 194 11 155 5.22e-25 106
Msa0043240 MtrunA17_Chr4g0065211 38.235 170 91 6 54 214 151 315 8.10e-25 111
Msa0043240 MtrunA17_Chr5g0428011 47.826 115 52 4 51 162 23 132 5.60e-24 104
Msa0043240 MtrunA17_Chr6g0461841 50.000 108 47 3 54 160 190 291 8.37e-23 104
Msa0043240 MtrunA17_Chr5g0428071 34.286 210 115 7 28 218 9 214 1.75e-21 97.8
Msa0043240 MtrunA17_Chr2g0310761 44.340 106 54 2 54 159 168 268 8.23e-21 98.2
Msa0043240 MtrunA17_Chr8g0357611 42.857 105 55 2 55 159 179 278 1.41e-20 97.8
Msa0043240 MtrunA17_Chr2g0310781 41.228 114 62 2 46 159 142 250 5.79e-20 95.5
Msa0043240 MtrunA17_Chr5g0440771 42.342 111 56 3 54 160 3 109 1.22e-19 87.8
Msa0043240 MtrunA17_Chr1g0196631 42.857 105 55 2 54 158 193 292 1.25e-19 94.4
Msa0043240 MtrunA17_Chr5g0412711 40.336 119 67 2 53 171 14 128 1.28e-19 88.6
Msa0043240 MtrunA17_Chr4g0058551 43.590 117 60 3 46 162 2 112 1.64e-19 86.7
Msa0043240 MtrunA17_Chr3g0117061 40.833 120 65 3 52 171 6 119 7.51e-18 82.8
Msa0043240 MtrunA17_Chr4g0072741 44.340 106 54 3 54 159 51 151 1.00e-15 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043240 AT2G01190.1 47.036 776 267 29 27 749 36 720 2.50e-153 463
Msa0043240 AT3G18230.1 41.441 444 193 13 32 466 38 423 1.14e-67 236
Msa0043240 AT4G05150.1 37.847 288 124 11 22 280 36 297 4.02e-39 152
Msa0043240 AT5G09620.1 50.676 148 62 4 27 166 8 152 2.92e-35 141
Msa0043240 AT5G09620.2 50.676 148 62 4 27 166 8 152 4.54e-35 140
Msa0043240 AT5G64430.1 48.993 149 59 4 27 161 8 153 1.90e-32 132
Msa0043240 AT1G25300.1 53.913 115 46 1 46 160 2 109 4.37e-32 126
Msa0043240 AT5G16220.1 48.462 130 56 3 35 162 19 139 7.57e-26 112
Msa0043240 AT5G49920.1 38.356 146 71 4 53 194 8 138 4.21e-25 106
Msa0043240 AT1G79570.3 35.882 170 93 5 51 220 173 326 1.39e-23 107
Msa0043240 AT3G46920.1 38.732 142 83 3 54 194 8 146 2.52e-23 106
Msa0043240 AT3G46920.2 38.732 142 83 3 54 194 74 212 2.80e-23 106
Msa0043240 AT1G79570.4 35.882 170 93 5 51 220 173 326 3.36e-23 106
Msa0043240 AT1G79570.5 35.882 170 93 5 51 220 173 326 3.36e-23 106
Msa0043240 AT1G79570.2 35.882 170 93 5 51 220 173 326 3.70e-23 106
Msa0043240 AT1G79570.1 35.882 170 93 5 51 220 173 326 3.70e-23 106
Msa0043240 AT1G04700.3 43.448 145 70 6 31 174 100 233 2.41e-22 103
Msa0043240 AT1G04700.1 47.934 121 53 5 55 174 122 233 3.09e-22 103
Msa0043240 AT1G04700.2 47.934 121 53 5 55 174 122 233 3.09e-22 103
Msa0043240 AT3G26510.1 40.769 130 68 3 50 174 5 130 4.91e-22 95.1
Msa0043240 AT3G26510.4 40.769 130 68 3 50 174 5 130 4.91e-22 95.1
Msa0043240 AT3G26510.3 40.769 130 68 3 50 174 5 130 4.91e-22 95.1
Msa0043240 AT3G26510.2 40.769 130 68 3 50 174 5 130 4.91e-22 95.1
Msa0043240 AT3G26510.6 40.769 130 68 3 50 174 5 130 4.91e-22 95.1
Msa0043240 AT3G26510.5 40.769 130 68 3 50 174 5 130 4.91e-22 95.1
Msa0043240 AT1G16270.1 44.444 108 55 2 52 159 162 264 6.15e-22 102
Msa0043240 AT1G16270.2 44.444 108 55 2 52 159 162 264 6.15e-22 102
Msa0043240 AT1G16270.3 44.444 108 55 2 52 159 162 264 6.15e-22 102
Msa0043240 AT3G24715.1 45.000 120 58 4 54 170 175 289 2.81e-21 100
Msa0043240 AT3G24715.3 45.000 120 58 4 54 170 175 289 2.81e-21 100
Msa0043240 AT3G24715.2 45.000 120 58 4 54 170 175 289 2.81e-21 100
Msa0043240 AT5G57610.1 38.849 139 79 4 54 192 23 155 3.08e-21 100
Msa0043240 AT2G35050.1 42.500 120 62 4 51 169 173 286 3.46e-21 100
Msa0043240 AT2G35050.2 42.500 120 62 4 51 169 173 286 3.46e-21 100
Msa0043240 AT1G70640.1 42.982 114 57 4 50 162 3 109 2.00e-19 87.0
Msa0043240 AT3G48240.1 43.103 116 57 2 53 168 12 118 6.12e-19 85.5
Msa0043240 AT5G63130.1 40.909 110 56 2 53 162 13 113 5.18e-14 71.6
Msa0043240 AT5G63130.2 40.909 110 56 2 53 162 13 113 5.18e-14 71.6

Find 248 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGACGAAACGGCACCGTTTA+TGG 0.170692 1_1:+74344420 None:intergenic
GTTTCTCAACCTGGATCTTT+TGG 0.172762 1_1:-74344277 Msa0043240:CDS
TTCTGTGCAGCAGGCTAATA+TGG 0.185433 1_1:-74342967 Msa0043240:CDS
CCTTGTTGGGGCTGTCTTGC+AGG 0.210879 1_1:+74342999 None:intergenic
TGGCGAATTTGCCTCCTATT+AGG 0.214995 1_1:-74344156 Msa0043240:CDS
ATGGTGGTTCTGGTGGTGTT+AGG 0.215415 1_1:-74344120 Msa0043240:CDS
CTCTCCAAAACCTTGCTTAA+TGG 0.228074 1_1:-74344685 Msa0043240:CDS
GACTTCTTCGTCTCCGTCTT+TGG 0.229377 1_1:-74344176 Msa0043240:CDS
AGCAGCCGTCATTTCAGTTT+TGG 0.244960 1_1:+74342836 None:intergenic
GCAGCAGGATCAGAAGGTTT+TGG 0.258724 1_1:-74344062 Msa0043240:CDS
GGCGAATTTGCCTCCTATTA+GGG 0.266693 1_1:-74344155 Msa0043240:CDS
AATTATATGACAATCATTTC+AGG 0.285362 1_1:+74342247 None:intergenic
AGAAATATTGTAACCTTGTT+GGG 0.287856 1_1:+74342986 None:intergenic
GGAATTGACTGAGCAGATTC+AGG 0.292958 1_1:+74344493 None:intergenic
TCTTCCATTAAGCAAGGTTT+TGG 0.293356 1_1:+74344681 None:intergenic
CTTCTCCTGATTCAGTTTCA+AGG 0.299311 1_1:-74343661 Msa0043240:intron
GTATCCACCCTTGTAGTTCC+AGG 0.300999 1_1:+74343341 None:intergenic
GGTTGACGGCGTTGGAGGTT+GGG 0.306728 1_1:+74344966 None:intergenic
CAAATTGTTGTTGCTGCTGC+TGG 0.308116 1_1:+74343228 None:intergenic
TCTTCAACATGCACCCTAAT+AGG 0.318542 1_1:+74344142 None:intergenic
GTTGTTGGTGTTGGTGGTAT+TGG 0.331151 1_1:-74344013 Msa0043240:CDS
ATGGAGACTTCTTCGTCCTT+TGG 0.332324 1_1:-74344202 Msa0043240:CDS
CTGCATATATAAAACATAAA+AGG 0.333555 1_1:+74342458 None:intergenic
TCTTGTATTTCATAATTCAT+AGG 0.341458 1_1:-74342349 Msa0043240:three_prime_UTR
AGCATATTCATAAGCATAAC+TGG 0.343168 1_1:+74342680 None:intergenic
GTCTCCATCATAGGCGAATC+AGG 0.346187 1_1:+74344217 None:intergenic
GGTAGGGGAGCACTTCTAAT+GGG 0.347012 1_1:+74342858 None:intergenic
CTGGCAGGGGCAGCAGGATT+AGG 0.349948 1_1:+74342699 None:intergenic
GGGGAGGAATCAACGGAATC+GGG 0.352597 1_1:+74344895 None:intergenic
GTCCCATGAGTCGTTGTTGC+GGG 0.355446 1_1:+74344867 None:intergenic
CATGTTGAAGATGGTGGTTC+TGG 0.360128 1_1:-74344130 Msa0043240:CDS
GGGTAGGGGAGCACTTCTAA+TGG 0.363591 1_1:+74342857 None:intergenic
ACTGAGACGGATGGTGGATC+TGG 0.365420 1_1:+74342730 None:intergenic
TTCAATTGGATGTGGCCTTT+CGG 0.366787 1_1:-74342149 Msa0043240:three_prime_UTR
TAGTTGAGGTGTGGTGGTGG+TGG 0.370870 1_1:+74344919 None:intergenic
CGGTTGACGGCGTTGGAGGT+TGG 0.372039 1_1:+74344965 None:intergenic
ACTGCACATCAGACGGAGTT+TGG 0.374152 1_1:+74344822 None:intergenic
ATTGGTTCTGCTGTGGTTGT+TGG 0.379755 1_1:-74343902 Msa0043240:CDS
TGATGAACAGTTTGCTCAAA+TGG 0.382086 1_1:-74344035 Msa0043240:CDS
GGATAGTATGTAGGAATTGC+AGG 0.382162 1_1:+74343068 None:intergenic
CAGAAATATTGTAACCTTGT+TGG 0.382832 1_1:+74342985 None:intergenic
TTGACATGGTGTATGATTCA+TGG 0.387901 1_1:-74342207 Msa0043240:three_prime_UTR
CAGCAGCAGCAGTTTATTCA+TGG 0.391314 1_1:-74343113 Msa0043240:CDS
CATCAGAGAATACCCTATTC+TGG 0.394884 1_1:+74343873 None:intergenic
CCTGTACATGTTGCTGCACC+TGG 0.396429 1_1:+74343285 None:intergenic
GCGGCGGTTGGTGTTCCAAT+TGG 0.402499 1_1:-74343920 Msa0043240:CDS
TGGTGGTTCTGGTGGTGTTA+GGG 0.407877 1_1:-74344119 Msa0043240:CDS
CGGGTCATTGTTTCTTGACA+TGG 0.410192 1_1:-74342221 Msa0043240:three_prime_UTR
TTCTTGTTGACGAGTTCAAT+TGG 0.411863 1_1:-74342163 Msa0043240:three_prime_UTR
GGATGCTGTGCAGGAACTTC+CGG 0.414421 1_1:+74342570 None:intergenic
TGCTGTTGATGCTGACTTGT+AGG 0.418339 1_1:+74342768 None:intergenic
TGTTGGTGATTACCAGAATA+GGG 0.419360 1_1:-74343885 Msa0043240:CDS
GCTCAAATGGTTGTTGGTGT+TGG 0.422104 1_1:-74344022 Msa0043240:CDS
TGTTCCTGATTCGCCTATGA+TGG 0.422549 1_1:-74344221 Msa0043240:CDS
AACGAATCTAGGTCTTCGTT+TGG 0.425475 1_1:+74344634 None:intergenic
GGTCTTGATGATGATGTTGC+TGG 0.426742 1_1:-74344346 Msa0043240:CDS
GCATAACTGGCAGGGGCAGC+AGG 0.427527 1_1:+74342693 None:intergenic
CTCCGTCTGATGTGCAGTTA+CGG 0.430728 1_1:-74344817 Msa0043240:CDS
CCTGATGGTGTTTCTCAACC+TGG 0.431504 1_1:-74344286 Msa0043240:CDS
GTTGACGGCGTTGGAGGTTG+GGG 0.431698 1_1:+74344967 None:intergenic
CAACCTCCAACGCCGTCAAC+CGG 0.431862 1_1:-74344964 Msa0043240:CDS
AGGGGAGGAATCAACGGAAT+CGG 0.433576 1_1:+74344894 None:intergenic
GCAAACCTTGAAACTGAATC+AGG 0.434694 1_1:+74343656 None:intergenic
TCGTGTTTGCTACCTGTTTG+TGG 0.436327 1_1:-74342421 Msa0043240:three_prime_UTR
TTGTTGGTGATTACCAGAAT+AGG 0.438247 1_1:-74343886 Msa0043240:CDS
GAGGCTGTTGTTGCTGCTGA+TGG 0.438597 1_1:+74343201 None:intergenic
CCAACCGCCGCCAGCGTAGT+TGG 0.439807 1_1:+74343932 None:intergenic
ACCTCGATTAAGCGACGAAA+CGG 0.444945 1_1:+74344408 None:intergenic
TTATATATGCAGTTCTCGTT+GGG 0.445090 1_1:-74342447 Msa0043240:three_prime_UTR
ATTTGCTCTTGATAAACAAC+AGG 0.445416 1_1:+74343374 None:intergenic
GCTGCTTACAGAGCTGCAAC+TGG 0.449004 1_1:-74342816 Msa0043240:CDS
AGCTGCTACTATGATGCAAC+CGG 0.450983 1_1:-74342589 Msa0043240:CDS
TCAAGCTCAGGCACAATCTC+AGG 0.452943 1_1:-74343759 Msa0043240:CDS
GGCAAATACATACCACAAAC+AGG 0.454170 1_1:+74342409 None:intergenic
CTCGATCCTACTGTTAGATC+CGG 0.457694 1_1:-74344460 Msa0043240:CDS
TGATGGGGCTGTTGCTGTGA+TGG 0.459372 1_1:+74343038 None:intergenic
TAGTAGCAGCTGCCATGGTC+TGG 0.462175 1_1:+74342601 None:intergenic
GACATAACAGAGAGCTTTGT+CGG 0.465413 1_1:+74344771 None:intergenic
CCGTCTGACGGATGCTGTGC+AGG 0.467762 1_1:+74342561 None:intergenic
TGGTTCTTTGATACCATAAA+CGG 0.472006 1_1:-74344433 Msa0043240:CDS
TTTATATATGCAGTTCTCGT+TGG 0.473907 1_1:-74342448 Msa0043240:three_prime_UTR
TTACAATATTTCTGTGCAGC+AGG 0.475574 1_1:-74342976 Msa0043240:CDS
GTAGGAACTTGCACAAATTG+AGG 0.475620 1_1:+74342786 None:intergenic
TGGACAGAGGCTACAGGATG+AGG 0.477050 1_1:-74343993 Msa0043240:CDS
TAAATCTTCATCGGTTGAAA+CGG 0.478449 1_1:+74344606 None:intergenic
CAAATGGTTGTTGGTGTTGG+TGG 0.479436 1_1:-74344019 Msa0043240:CDS
TGCGGCTGATGTTGAGGTTG+TGG 0.481004 1_1:+74343161 None:intergenic
GCCGCCAGCGTAGTTGGCAC+TGG 0.484966 1_1:+74343938 None:intergenic
CAGTTTGCTCAAATGGTTGT+TGG 0.485362 1_1:-74344028 Msa0043240:CDS
ACAACCACAGCAGAACCAAT+TGG 0.486447 1_1:+74343905 None:intergenic
GGTCCGGTTGACGGCGTTGG+AGG 0.489230 1_1:+74344961 None:intergenic
TACATAGTAAACCTGGTGAT+GGG 0.489469 1_1:+74343022 None:intergenic
TTGGATGTGGCTGGAGGGAA+AGG 0.491131 1_1:+74344841 None:intergenic
TTACAATTCCCAAAAGATCC+AGG 0.491686 1_1:+74344268 None:intergenic
GCAGCAGCAGCAGGATCAGA+AGG 0.491807 1_1:-74344068 Msa0043240:CDS
GGTGGTCCGGTTGACGGCGT+TGG 0.493691 1_1:+74344958 None:intergenic
GTGTGGTGGTGGTGGAGCCA+CGG 0.495167 1_1:+74344927 None:intergenic
GGTGTATGATTCATGGCTAT+TGG 0.495225 1_1:-74342200 Msa0043240:three_prime_UTR
GATAACGGTGGTCCGGTTGA+CGG 0.499187 1_1:+74344952 None:intergenic
GGGTAGTTGAGGTGTGGTGG+TGG 0.500900 1_1:+74344916 None:intergenic
TGAGAGTAGTATACTTGAGC+AGG 0.501127 1_1:+74342654 None:intergenic
CGATCCACATGGTAGGATCC+AGG 0.502009 1_1:-74343303 Msa0043240:CDS
GGTGGAGCCACGGAGGATAA+CGG 0.503298 1_1:+74344937 None:intergenic
TGCTGCTTCATGCCGTCTGA+CGG 0.504939 1_1:+74342549 None:intergenic
TGTTGCTGTGATGGATATAC+AGG 0.506750 1_1:+74343047 None:intergenic
CACGGAGGATAACGGTGGTC+CGG 0.508705 1_1:+74344945 None:intergenic
GACGAAGAAGTCTCCATCAT+AGG 0.509913 1_1:+74344208 None:intergenic
GAATTGTAAGAATTTGAAGC+AGG 0.512443 1_1:-74344254 Msa0043240:CDS
AAAGTCAAGTGGCGGTGGCT+CGG 0.513401 1_1:-74343690 Msa0043240:CDS
CATATTGAACAAGGTTCCAC+TGG 0.513758 1_1:-74344316 Msa0043240:CDS
TGGTACTGTGAAGGCATTGT+GGG 0.515032 1_1:+74342621 None:intergenic
TAACAGAGAGCTTTGTCGGT+TGG 0.516165 1_1:+74344775 None:intergenic
CAGCAACATGTACAGGATCC+TGG 0.517129 1_1:-74343278 Msa0043240:CDS
CTGAGACGGATGGTGGATCT+GGG 0.517543 1_1:+74342731 None:intergenic
ACCTGTGGCTGAGGAGTTGG+TGG 0.517587 1_1:+74343809 None:intergenic
TTCATCGATCATCATCCTCA+TGG 0.518920 1_1:-74344998 Msa0043240:exon
TCGGGGTAGTTGAGGTGTGG+TGG 0.520239 1_1:+74344913 None:intergenic
GTAGTTGGCACTGGAGGATG+AGG 0.520654 1_1:+74343947 None:intergenic
AGCAGCAGCAGTTTATTCAT+GGG 0.521183 1_1:-74343112 Msa0043240:CDS
CCAACTACGCTGGCGGCGGT+TGG 0.521638 1_1:-74343932 Msa0043240:CDS
TATTCATAAGCATAACTGGC+AGG 0.521937 1_1:+74342684 None:intergenic
TGCTGCTGCGGCTGATGTTG+AGG 0.522699 1_1:+74343155 None:intergenic
TTGTTGAACCAATGTGGTGG+GGG 0.524626 1_1:+74342896 None:intergenic
CCAGGTGCAGCAACATGTAC+AGG 0.525477 1_1:-74343285 Msa0043240:CDS
TCAAGCTCAAAATCAAGCTC+AGG 0.526325 1_1:-74343771 Msa0043240:CDS
CTTATACAGTATAATAACCT+TGG 0.527643 1_1:+74342313 None:intergenic
TAATTCATAGGAAAGGAAAT+CGG 0.527873 1_1:-74342337 Msa0043240:three_prime_UTR
TCAAGATGCTAGTTCAATCA+AGG 0.528420 1_1:+74342124 None:intergenic
AGACGGAGTTTGGATGTGGC+TGG 0.531377 1_1:+74344832 None:intergenic
GAAGGCATTGTGGGCGCCAT+AGG 0.531634 1_1:+74342630 None:intergenic
CAACAAAAGTCAAGTGGCGG+TGG 0.531834 1_1:-74343695 Msa0043240:CDS
GTTCCCGCAACAACGACTCA+TGG 0.532318 1_1:-74344870 Msa0043240:CDS
AGCTGATACTTGAAAGTGAA+AGG 0.533088 1_1:+74344658 None:intergenic
TTTGTTGAACCAATGTGGTG+GGG 0.535933 1_1:+74342895 None:intergenic
CCACCATCCGTCTCAGTCCA+TGG 0.536469 1_1:-74342724 Msa0043240:CDS
AGAGCTTTGTCGGTTGGACG+AGG 0.539750 1_1:+74344781 None:intergenic
TTGACGAGTTCAATTGGATG+TGG 0.539823 1_1:-74342157 Msa0043240:three_prime_UTR
AGTATACTACTCTCAGCCTA+TGG 0.542313 1_1:-74342646 Msa0043240:CDS
CGTCCCATGAGTCGTTGTTG+CGG 0.542603 1_1:+74344866 None:intergenic
AGTGCCAACTACGCTGGCGG+CGG 0.544621 1_1:-74343936 Msa0043240:CDS
AAATTCAACCTGGAACTACA+AGG 0.546548 1_1:-74343349 Msa0043240:CDS
TGGTATTGGACAGAGGCTAC+AGG 0.548332 1_1:-74343999 Msa0043240:CDS
GGCAGCAGGATTAGGAGCCA+TGG 0.551508 1_1:+74342707 None:intergenic
GAAAGGTCTTCCATTAAGCA+AGG 0.551628 1_1:+74344675 None:intergenic
CATCATAGTAGCAGCTGCCA+TGG 0.552855 1_1:+74342596 None:intergenic
TGAGCAGATTCAGGTTTCGA+TGG 0.553906 1_1:+74344502 None:intergenic
CCAGGTTGAGAAACACCATC+AGG 0.555428 1_1:+74344286 None:intergenic
GTAGGGGAGCACTTCTAATG+GGG 0.555535 1_1:+74342859 None:intergenic
ACCACCAACTCCTCAGCCAC+AGG 0.556074 1_1:-74343810 Msa0043240:CDS
TCTGTGCAGCAGGCTAATAT+GGG 0.556647 1_1:-74342966 Msa0043240:CDS
GGAACGAGGGGAGGAATCAA+CGG 0.556888 1_1:+74344888 None:intergenic
CAACGGAATCGGGGTAGTTG+AGG 0.557276 1_1:+74344905 None:intergenic
ATTCTCTGATGATGAGAGAT+CGG 0.557288 1_1:-74343861 Msa0043240:CDS
TATTTCATAATTCATAGGAA+AGG 0.557544 1_1:-74342344 Msa0043240:three_prime_UTR
GGATATACAGGATAGTATGT+AGG 0.557743 1_1:+74343059 None:intergenic
TCCTCCAGTGCCAACTACGC+TGG 0.559724 1_1:-74343942 Msa0043240:CDS
TGCTGTTGCAGCAAATAACC+AGG 0.561601 1_1:+74343260 None:intergenic
CTACTGTTAGATCCGGTGAA+TGG 0.563307 1_1:-74344453 Msa0043240:CDS
GGACAGAGGCTACAGGATGA+GGG 0.567639 1_1:-74343992 Msa0043240:CDS
CACCGTAACTGCACATCAGA+CGG 0.574389 1_1:+74344815 None:intergenic
GGTTGCTGCGGCTGATGTTG+AGG 0.576485 1_1:+74343182 None:intergenic
GTCTTGATGATGATGTTGCT+GGG 0.576576 1_1:-74344345 Msa0043240:CDS
GTTGAAGATGGTGGTTCTGG+TGG 0.576663 1_1:-74344127 Msa0043240:CDS
AAACGGAGATTAACGAATCT+AGG 0.578203 1_1:+74344623 None:intergenic
ACAACCTGTGGCTGAGGAGT+TGG 0.580416 1_1:+74343806 None:intergenic
GGATAAATCCGCGAGTGAGG+TGG 0.580510 1_1:+74344714 None:intergenic
ACTTGAACAACCTGTGGCTG+AGG 0.580822 1_1:+74343800 None:intergenic
GACAAAGCTCTCTGTTATGT+CGG 0.581377 1_1:-74344769 Msa0043240:CDS
GCCGTTTCGTCGCTTAATCG+AGG 0.581594 1_1:-74344409 Msa0043240:CDS
GTACATAGTAAACCTGGTGA+TGG 0.582079 1_1:+74343021 None:intergenic
CCATGGACTGAGACGGATGG+TGG 0.582286 1_1:+74342724 None:intergenic
ATTAGGGTGCATGTTGAAGA+TGG 0.582359 1_1:-74344139 Msa0043240:CDS
GAAATATTGTAACCTTGTTG+GGG 0.583775 1_1:+74342987 None:intergenic
GAGTCGTTGTTGCGGGAACG+AGG 0.584939 1_1:+74344874 None:intergenic
TTCCCGCAACAACGACTCAT+GGG 0.585174 1_1:-74344869 Msa0043240:CDS
GTCGTTGTTGCGGGAACGAG+GGG 0.585961 1_1:+74344876 None:intergenic
ATCGGATCATGGTGTGCCTG+TGG 0.586106 1_1:-74343843 Msa0043240:CDS
ATTCATAAGCATAACTGGCA+GGG 0.588015 1_1:+74342685 None:intergenic
GGAGGCAAATTCGCCAAAGA+CGG 0.588179 1_1:+74344163 None:intergenic
CCTACCCAAAACTGAAATGA+CGG 0.588235 1_1:-74342841 Msa0043240:CDS
TACTCACAAGTGCAAACTTG+TGG 0.589246 1_1:+74342073 None:intergenic
TTCATAAGCATAACTGGCAG+GGG 0.590768 1_1:+74342686 None:intergenic
TCCACTGGAGAAGCTCCTGA+TGG 0.593224 1_1:-74344301 Msa0043240:CDS
TGAAGCTGTTGTTGCTGCTG+CGG 0.593547 1_1:+74343143 None:intergenic
TGTTCCAATTGGTTCTGCTG+TGG 0.593696 1_1:-74343909 Msa0043240:CDS
AGACGAAGAAGTCGAACCAA+AGG 0.594657 1_1:+74344186 None:intergenic
ACAGCAACAGCCCCATCACC+AGG 0.596464 1_1:-74343033 Msa0043240:CDS
CGGAGTTTGGATGTGGCTGG+AGG 0.598235 1_1:+74344835 None:intergenic
TGAACGCGCCACCTCACTCG+CGG 0.598732 1_1:-74344722 Msa0043240:CDS
AGTCGTTGTTGCGGGAACGA+GGG 0.600229 1_1:+74344875 None:intergenic
GCCAGCGTAGTTGGCACTGG+AGG 0.600507 1_1:+74343941 None:intergenic
ACATAGTAAACCTGGTGATG+GGG 0.601720 1_1:+74343023 None:intergenic
CATCAGACGGAGTTTGGATG+TGG 0.601884 1_1:+74344828 None:intergenic
GTTGGGGTTGCGCCTCCATG+AGG 0.603686 1_1:+74344983 None:intergenic
GCAGCAGCAGTTTATTCATG+GGG 0.604368 1_1:-74343111 Msa0043240:CDS
GTTGTTGCGGGAACGAGGGG+AGG 0.604508 1_1:+74344879 None:intergenic
CTTGAAACTGAATCAGGAGA+AGG 0.605496 1_1:+74343662 None:intergenic
TAGGAAAGGAAATCGGTCCA+AGG 0.605564 1_1:-74342330 Msa0043240:three_prime_UTR
CTGGTACTGTGAAGGCATTG+TGG 0.606843 1_1:+74342620 None:intergenic
GATGATGAGAGATCGGATCA+TGG 0.609090 1_1:-74343854 Msa0043240:CDS
CTGGATCCTACCATGTGGAT+CGG 0.610151 1_1:+74343304 None:intergenic
GGAGTTTGGATGTGGCTGGA+GGG 0.611331 1_1:+74344836 None:intergenic
TTGCAGGTACATAGTAAACC+TGG 0.612429 1_1:+74343015 None:intergenic
CCTGCACAGCATCCGTCAGA+CGG 0.613220 1_1:-74342561 Msa0043240:CDS
CGTGGATAAATCCGCGAGTG+AGG 0.614369 1_1:+74344711 None:intergenic
GATAGTATGTAGGAATTGCA+GGG 0.616127 1_1:+74343069 None:intergenic
GGGAGGAATCAACGGAATCG+GGG 0.618967 1_1:+74344896 None:intergenic
GGTATCAAAGAACCATTCAC+CGG 0.620315 1_1:+74344441 None:intergenic
ATCAATTTGTCCGATCCACA+TGG 0.621127 1_1:-74343314 Msa0043240:CDS
TCGGATCATGGTGTGCCTGT+GGG 0.622213 1_1:-74343842 Msa0043240:CDS
GGGAATAATCATATTGAACA+AGG 0.623357 1_1:-74344325 Msa0043240:CDS
TCAACATGCACCCTAATAGG+AGG 0.625269 1_1:+74344145 None:intergenic
CATTCACCGGATCTAACAGT+AGG 0.628644 1_1:+74344454 None:intergenic
GAGCAAATTCAAATTCAACC+TGG 0.628952 1_1:-74343359 Msa0043240:CDS
ACAGTAGGATCGAGAATTTG+CGG 0.630234 1_1:+74344469 None:intergenic
TCCAGTGCCAACTACGCTGG+CGG 0.630709 1_1:-74343939 Msa0043240:CDS
GCCATGGTCTGGTACTGTGA+AGG 0.631831 1_1:+74342612 None:intergenic
CCTGCAAGACAGCCCCAACA+AGG 0.639304 1_1:-74342999 Msa0043240:CDS
ACCATCAGGAGCTTCTCCAG+TGG 0.641015 1_1:+74344300 None:intergenic
ATTTGTCCGATCCACATGGT+AGG 0.641689 1_1:-74343310 Msa0043240:CDS
AGTTCAATCAAGGCTCCGAA+AGG 0.642069 1_1:+74342134 None:intergenic
GCTTACAGAGCTGCAACTGG+AGG 0.643603 1_1:-74342813 Msa0043240:CDS
TGGTGGTGGTGGAGCCACGG+AGG 0.644740 1_1:+74344930 None:intergenic
CAATTTCAACAAAAGTCAAG+TGG 0.647060 1_1:-74343701 Msa0043240:CDS
TTAGGAGCCATGGACTGAGA+CGG 0.648185 1_1:+74342717 None:intergenic
GAGCTTTGTCGGTTGGACGA+GGG 0.650315 1_1:+74344782 None:intergenic
CGGTTGGACGAGGGACGATG+TGG 0.650967 1_1:+74344791 None:intergenic
TCAACCTGGAACTACAAGGG+TGG 0.652554 1_1:-74343345 Msa0043240:CDS
GTGTTGGTGGTATTGGACAG+AGG 0.654498 1_1:-74344006 Msa0043240:CDS
TCTGCTAGAAGGGATTGTTG+TGG 0.662115 1_1:+74342935 None:intergenic
GTTGGCACTGGAGGATGAGG+CGG 0.662967 1_1:+74343950 None:intergenic
GGTTGAACTTGAACAACCTG+TGG 0.669833 1_1:+74343794 None:intergenic
CGTCTGATGTGCAGTTACGG+TGG 0.670865 1_1:-74344814 Msa0043240:CDS
GAATCGGGGTAGTTGAGGTG+TGG 0.676463 1_1:+74344910 None:intergenic
GAGCCATGGACTGAGACGGA+TGG 0.677383 1_1:+74342721 None:intergenic
TTTCAACAAAAGTCAAGTGG+CGG 0.678298 1_1:-74343698 Msa0043240:CDS
AATTCAACCTGGAACTACAA+GGG 0.679111 1_1:-74343348 Msa0043240:CDS
AGGGTGCATGTTGAAGATGG+TGG 0.679137 1_1:-74344136 Msa0043240:CDS
AAAGCTCTCTGTTATGTCGG+CGG 0.682153 1_1:-74344766 Msa0043240:CDS
TGTTGAGGTTGTGGTTGCTG+CGG 0.693955 1_1:+74343170 None:intergenic
CGGACCACCGTTATCCTCCG+TGG 0.696266 1_1:-74344944 Msa0043240:CDS
CAGCAGCAGTTTATTCATGG+GGG 0.698822 1_1:-74343110 Msa0043240:CDS
ATCGATCATCATCCTCATGG+AGG 0.700235 1_1:-74344995 Msa0043240:exon
GCCTTCACAGTACCAGACCA+TGG 0.702903 1_1:-74342613 Msa0043240:CDS
GTAGGATCGAGAATTTGCGG+TGG 0.710077 1_1:+74344472 None:intergenic
ACTTGCTTATAGTGGCTGTG+AGG 0.735355 1_1:+74342518 None:intergenic
GGAGCCACGGAGGATAACGG+TGG 0.735804 1_1:+74344940 None:intergenic
TGCACCTGGATCCTACCATG+TGG 0.740835 1_1:+74343299 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATGTTTGTTTACAT+AGG - chr1_1:74343589-74343608 Msa0043240:intron 15.0%
!!! AAGAAACAATTTTGAAAAAT+TGG - chr1_1:74344671-74344690 Msa0043240:CDS 15.0%
!!! TCTGTTTTATATTTGTGATA+TGG - chr1_1:74343562-74343581 Msa0043240:intron 20.0%
!!! ACAATTTTGAAAAATTGGTT+TGG - chr1_1:74344676-74344695 Msa0043240:CDS 20.0%
!! CTGCATATATAAAACATAAA+AGG + chr1_1:74344705-74344724 None:intergenic 20.0%
!! TCTTGTATTTCATAATTCAT+AGG - chr1_1:74344811-74344830 Msa0043240:CDS 20.0%
!! TATTTCATAATTCATAGGAA+AGG - chr1_1:74344816-74344835 Msa0043240:CDS 20.0%
!! AATTATATGACAATCATTTC+AGG + chr1_1:74344916-74344935 None:intergenic 20.0%
!!! ATGATTGTCATATAATTTTG+CGG - chr1_1:74344919-74344938 Msa0043240:CDS 20.0%
! AAATAAAAGGACGAAAAAGA+GGG + chr1_1:74342060-74342079 None:intergenic 25.0%
! AAAATAAAAGGACGAAAAAG+AGG + chr1_1:74342061-74342080 None:intergenic 25.0%
!! CATGTTTTCTAAATCTTCAT+CGG + chr1_1:74342566-74342585 None:intergenic 25.0%
! GAATTACAAAAACAGGTAAA+TGG + chr1_1:74343542-74343561 None:intergenic 25.0%
! AAACAGAGAATTACAAAAAC+AGG + chr1_1:74343549-74343568 None:intergenic 25.0%
! TGATTATTATAAACCTAGAG+TGG - chr1_1:74343674-74343693 Msa0043240:CDS 25.0%
! AGAAATATTGTAACCTTGTT+GGG + chr1_1:74344177-74344196 None:intergenic 25.0%
!!! TTTTATGAACTTGCTTATAG+TGG + chr1_1:74344653-74344672 None:intergenic 25.0%
!!! ACACAGTTTCTTATTTTCTA+TGG + chr1_1:74344775-74344794 None:intergenic 25.0%
! TAATTCATAGGAAAGGAAAT+CGG - chr1_1:74344823-74344842 Msa0043240:CDS 25.0%
! CTTATACAGTATAATAACCT+TGG + chr1_1:74344850-74344869 None:intergenic 25.0%
!! TGATTGTCATATAATTTTGC+GGG - chr1_1:74344920-74344939 Msa0043240:CDS 25.0%
! TTTTGCAGCGCAAAAATAAA+AGG + chr1_1:74342073-74342092 None:intergenic 30.0%
!!! TTTATTTTTGCGCTGCAAAA+AGG - chr1_1:74342073-74342092 Msa0043240:three_prime_UTR 30.0%
!!! TTATTTTTGCGCTGCAAAAA+GGG - chr1_1:74342074-74342093 Msa0043240:three_prime_UTR 30.0%
! TAAATCTTCATCGGTTGAAA+CGG + chr1_1:74342557-74342576 None:intergenic 30.0%
TGGTTCTTTGATACCATAAA+CGG - chr1_1:74342727-74342746 Msa0043240:CDS 30.0%
! TCTTCTGTGAATCATCTTTT+AGG - chr1_1:74342793-74342812 Msa0043240:CDS 30.0%
GGGAATAATCATATTGAACA+AGG - chr1_1:74342835-74342854 Msa0043240:CDS 30.0%
! GAATTGTAAGAATTTGAAGC+AGG - chr1_1:74342906-74342925 Msa0043240:CDS 30.0%
! CTTGACTTTTGTTGAAATTG+AGG + chr1_1:74343459-74343478 None:intergenic 30.0%
CAATTTCAACAAAAGTCAAG+TGG - chr1_1:74343459-74343478 Msa0043240:intron 30.0%
TTATTATAAACCTAGAGTGG+TGG - chr1_1:74343677-74343696 Msa0043240:CDS 30.0%
! GGTTTAGCAATATCTGAAAT+AGG - chr1_1:74343698-74343717 Msa0043240:CDS 30.0%
ATTTGCTCTTGATAAACAAC+AGG + chr1_1:74343789-74343808 None:intergenic 30.0%
GAAATATTGTAACCTTGTTG+GGG + chr1_1:74344176-74344195 None:intergenic 30.0%
CAGAAATATTGTAACCTTGT+TGG + chr1_1:74344178-74344197 None:intergenic 30.0%
AGCATATTCATAAGCATAAC+TGG + chr1_1:74344483-74344502 None:intergenic 30.0%
TTTATATATGCAGTTCTCGT+TGG - chr1_1:74344712-74344731 Msa0043240:CDS 30.0%
TTATATATGCAGTTCTCGTT+GGG - chr1_1:74344713-74344732 Msa0043240:CDS 30.0%
!! TATTTTTGCGCTGCAAAAAG+GGG - chr1_1:74342075-74342094 Msa0043240:three_prime_UTR 35.0%
! TCTTCCATTAAGCAAGGTTT+TGG + chr1_1:74342482-74342501 None:intergenic 35.0%
AGCTGATACTTGAAAGTGAA+AGG + chr1_1:74342505-74342524 None:intergenic 35.0%
AAACGGAGATTAACGAATCT+AGG + chr1_1:74342540-74342559 None:intergenic 35.0%
! TTTCTCAACCTGGATCTTTT+GGG - chr1_1:74342884-74342903 Msa0043240:CDS 35.0%
TTACAATTCCCAAAAGATCC+AGG + chr1_1:74342895-74342914 None:intergenic 35.0%
! TGATGAACAGTTTGCTCAAA+TGG - chr1_1:74343125-74343144 Msa0043240:CDS 35.0%
!! TTGTTGGTGATTACCAGAAT+AGG - chr1_1:74343274-74343293 Msa0043240:CDS 35.0%
!! TGTTGGTGATTACCAGAATA+GGG - chr1_1:74343275-74343294 Msa0043240:CDS 35.0%
! ATTCTCTGATGATGAGAGAT+CGG - chr1_1:74343299-74343318 Msa0043240:CDS 35.0%
TTTCAACAAAAGTCAAGTGG+CGG - chr1_1:74343462-74343481 Msa0043240:intron 35.0%
! CAATATCTGAAATAGGCTGT+TGG - chr1_1:74343705-74343724 Msa0043240:CDS 35.0%
GAGCAAATTCAAATTCAACC+TGG - chr1_1:74343801-74343820 Msa0043240:CDS 35.0%
AAATTCAACCTGGAACTACA+AGG - chr1_1:74343811-74343830 Msa0043240:CDS 35.0%
AATTCAACCTGGAACTACAA+GGG - chr1_1:74343812-74343831 Msa0043240:CDS 35.0%
GATAGTATGTAGGAATTGCA+GGG + chr1_1:74344094-74344113 None:intergenic 35.0%
GGATATACAGGATAGTATGT+AGG + chr1_1:74344104-74344123 None:intergenic 35.0%
TACATAGTAAACCTGGTGAT+GGG + chr1_1:74344141-74344160 None:intergenic 35.0%
! TTACAATATTTCTGTGCAGC+AGG - chr1_1:74344184-74344203 Msa0043240:CDS 35.0%
! TTTTGTTGAACCAATGTGGT+GGG + chr1_1:74344269-74344288 None:intergenic 35.0%
! ATTTTGTTGAACCAATGTGG+TGG + chr1_1:74344270-74344289 None:intergenic 35.0%
! TGCATTTTGTTGAACCAATG+TGG + chr1_1:74344273-74344292 None:intergenic 35.0%
ATTCATAAGCATAACTGGCA+GGG + chr1_1:74344478-74344497 None:intergenic 35.0%
TATTCATAAGCATAACTGGC+AGG + chr1_1:74344479-74344498 None:intergenic 35.0%
TTGACATGGTGTATGATTCA+TGG - chr1_1:74344953-74344972 Msa0043240:CDS 35.0%
TTCTTGTTGACGAGTTCAAT+TGG - chr1_1:74344997-74345016 Msa0043240:exon 35.0%
TCAAGATGCTAGTTCAATCA+AGG + chr1_1:74345039-74345058 None:intergenic 35.0%
TTCATCGATCATCATCCTCA+TGG - chr1_1:74342162-74342181 Msa0043240:three_prime_UTR 40.0%
! GACATAACAGAGAGCTTTGT+CGG + chr1_1:74342392-74342411 None:intergenic 40.0%
GACAAAGCTCTCTGTTATGT+CGG - chr1_1:74342391-74342410 Msa0043240:three_prime_UTR 40.0%
!!! CATTAAGCAAGGTTTTGGAG+AGG + chr1_1:74342477-74342496 None:intergenic 40.0%
CTCTCCAAAACCTTGCTTAA+TGG - chr1_1:74342475-74342494 Msa0043240:three_prime_UTR 40.0%
GAAAGGTCTTCCATTAAGCA+AGG + chr1_1:74342488-74342507 None:intergenic 40.0%
AACGAATCTAGGTCTTCGTT+TGG + chr1_1:74342529-74342548 None:intergenic 40.0%
AGAAAAAGACGAATTCGCGA+GGG + chr1_1:74342634-74342653 None:intergenic 40.0%
ACAGTAGGATCGAGAATTTG+CGG + chr1_1:74342694-74342713 None:intergenic 40.0%
GGTATCAAAGAACCATTCAC+CGG + chr1_1:74342722-74342741 None:intergenic 40.0%
!! GTCTTGATGATGATGTTGCT+GGG - chr1_1:74342815-74342834 Msa0043240:CDS 40.0%
CATATTGAACAAGGTTCCAC+TGG - chr1_1:74342844-74342863 Msa0043240:CDS 40.0%
! GTTTCTCAACCTGGATCTTT+TGG - chr1_1:74342883-74342902 Msa0043240:CDS 40.0%
TCTTCAACATGCACCCTAAT+AGG + chr1_1:74343021-74343040 None:intergenic 40.0%
ATTAGGGTGCATGTTGAAGA+TGG - chr1_1:74343021-74343040 Msa0043240:CDS 40.0%
! CAGTTTGCTCAAATGGTTGT+TGG - chr1_1:74343132-74343151 Msa0043240:CDS 40.0%
CATCAGAGAATACCCTATTC+TGG + chr1_1:74343290-74343309 None:intergenic 40.0%
! TGAGCTTGATTTTGAGCTTG+AGG + chr1_1:74343390-74343409 None:intergenic 40.0%
TCAAGCTCAAAATCAAGCTC+AGG - chr1_1:74343389-74343408 Msa0043240:CDS 40.0%
CTTGAAACTGAATCAGGAGA+AGG + chr1_1:74343501-74343520 None:intergenic 40.0%
CTTCTCCTGATTCAGTTTCA+AGG - chr1_1:74343499-74343518 Msa0043240:intron 40.0%
GCAAACCTTGAAACTGAATC+AGG + chr1_1:74343507-74343526 None:intergenic 40.0%
TATTGCTAAACCACCACTCT+AGG + chr1_1:74343690-74343709 None:intergenic 40.0%
! TATCTGAAATAGGCTGTTGG+TGG - chr1_1:74343708-74343727 Msa0043240:CDS 40.0%
ATCAATTTGTCCGATCCACA+TGG - chr1_1:74343846-74343865 Msa0043240:CDS 40.0%
AGCAGCAGCAGTTTATTCAT+GGG - chr1_1:74344048-74344067 Msa0043240:CDS 40.0%
GGATAGTATGTAGGAATTGC+AGG + chr1_1:74344095-74344114 None:intergenic 40.0%
!! TGTTGCTGTGATGGATATAC+AGG + chr1_1:74344116-74344135 None:intergenic 40.0%
! ACATAGTAAACCTGGTGATG+GGG + chr1_1:74344140-74344159 None:intergenic 40.0%
GTACATAGTAAACCTGGTGA+TGG + chr1_1:74344142-74344161 None:intergenic 40.0%
TTGCAGGTACATAGTAAACC+TGG + chr1_1:74344148-74344167 None:intergenic 40.0%
TTTGTTGAACCAATGTGGTG+GGG + chr1_1:74344268-74344287 None:intergenic 40.0%
!!! GTCATTTCAGTTTTGGGTAG+GGG + chr1_1:74344320-74344339 None:intergenic 40.0%
!!! CGTCATTTCAGTTTTGGGTA+GGG + chr1_1:74344321-74344340 None:intergenic 40.0%
CCTACCCAAAACTGAAATGA+CGG - chr1_1:74344319-74344338 Msa0043240:CDS 40.0%
GTAGGAACTTGCACAAATTG+AGG + chr1_1:74344377-74344396 None:intergenic 40.0%
TTCATAAGCATAACTGGCAG+GGG + chr1_1:74344477-74344496 None:intergenic 40.0%
TGAGAGTAGTATACTTGAGC+AGG + chr1_1:74344509-74344528 None:intergenic 40.0%
AGTATACTACTCTCAGCCTA+TGG - chr1_1:74344514-74344533 Msa0043240:CDS 40.0%
GGCAAATACATACCACAAAC+AGG + chr1_1:74344754-74344773 None:intergenic 40.0%
GGTGTATGATTCATGGCTAT+TGG - chr1_1:74344960-74344979 Msa0043240:CDS 40.0%
TTGACGAGTTCAATTGGATG+TGG - chr1_1:74345003-74345022 Msa0043240:five_prime_UTR 40.0%
TTCAATTGGATGTGGCCTTT+CGG - chr1_1:74345011-74345030 Msa0043240:five_prime_UTR 40.0%
TACTCACAAGTGCAAACTTG+TGG + chr1_1:74345090-74345109 None:intergenic 40.0%
ATCGATCATCATCCTCATGG+AGG - chr1_1:74342165-74342184 Msa0043240:three_prime_UTR 45.0%
! TAACAGAGAGCTTTGTCGGT+TGG + chr1_1:74342388-74342407 None:intergenic 45.0%
AAAGCTCTCTGTTATGTCGG+CGG - chr1_1:74342394-74342413 Msa0043240:three_prime_UTR 45.0%
CAGAAAAAGACGAATTCGCG+AGG + chr1_1:74342635-74342654 None:intergenic 45.0%
! TGAGCAGATTCAGGTTTCGA+TGG + chr1_1:74342661-74342680 None:intergenic 45.0%
GGAATTGACTGAGCAGATTC+AGG + chr1_1:74342670-74342689 None:intergenic 45.0%
CTCGATCCTACTGTTAGATC+CGG - chr1_1:74342700-74342719 Msa0043240:CDS 45.0%
CATTCACCGGATCTAACAGT+AGG + chr1_1:74342709-74342728 None:intergenic 45.0%
CTACTGTTAGATCCGGTGAA+TGG - chr1_1:74342707-74342726 Msa0043240:CDS 45.0%
ACCTCGATTAAGCGACGAAA+CGG + chr1_1:74342755-74342774 None:intergenic 45.0%
!! GGTCTTGATGATGATGTTGC+TGG - chr1_1:74342814-74342833 Msa0043240:CDS 45.0%
! TGTTCCTGATTCGCCTATGA+TGG - chr1_1:74342939-74342958 Msa0043240:CDS 45.0%
GACGAAGAAGTCTCCATCAT+AGG + chr1_1:74342955-74342974 None:intergenic 45.0%
ATGGAGACTTCTTCGTCCTT+TGG - chr1_1:74342958-74342977 Msa0043240:CDS 45.0%
AGACGAAGAAGTCGAACCAA+AGG + chr1_1:74342977-74342996 None:intergenic 45.0%
TGGCGAATTTGCCTCCTATT+AGG - chr1_1:74343004-74343023 Msa0043240:CDS 45.0%
GGCGAATTTGCCTCCTATTA+GGG - chr1_1:74343005-74343024 Msa0043240:CDS 45.0%
TCAACATGCACCCTAATAGG+AGG + chr1_1:74343018-74343037 None:intergenic 45.0%
! CATGTTGAAGATGGTGGTTC+TGG - chr1_1:74343030-74343049 Msa0043240:CDS 45.0%
! CAGCAGGATCAGAAGGTTTT+GGG - chr1_1:74343099-74343118 Msa0043240:CDS 45.0%
! AGCAGGATCAGAAGGTTTTG+GGG - chr1_1:74343100-74343119 Msa0043240:CDS 45.0%
GCTCAAATGGTTGTTGGTGT+TGG - chr1_1:74343138-74343157 Msa0043240:CDS 45.0%
!! CAAATGGTTGTTGGTGTTGG+TGG - chr1_1:74343141-74343160 Msa0043240:CDS 45.0%
!! GTTGTTGGTGTTGGTGGTAT+TGG - chr1_1:74343147-74343166 Msa0043240:CDS 45.0%
!! TGTTCCAATTGGTTCTGCTG+TGG - chr1_1:74343251-74343270 Msa0043240:CDS 45.0%
ACAACCACAGCAGAACCAAT+TGG + chr1_1:74343258-74343277 None:intergenic 45.0%
!! ATTGGTTCTGCTGTGGTTGT+TGG - chr1_1:74343258-74343277 Msa0043240:CDS 45.0%
GATGATGAGAGATCGGATCA+TGG - chr1_1:74343306-74343325 Msa0043240:CDS 45.0%
! GGTGGTTTTCTATATCCCAC+AGG + chr1_1:74343336-74343355 None:intergenic 45.0%
GGTTGAACTTGAACAACCTG+TGG + chr1_1:74343369-74343388 None:intergenic 45.0%
ATTTGTCCGATCCACATGGT+AGG - chr1_1:74343850-74343869 Msa0043240:CDS 45.0%
TGCTGTTGCAGCAAATAACC+AGG + chr1_1:74343903-74343922 None:intergenic 45.0%
! CAAATTGTTGTTGCTGCTGC+TGG + chr1_1:74343935-74343954 None:intergenic 45.0%
CAGCAGCAGCAGTTTATTCA+TGG - chr1_1:74344047-74344066 Msa0043240:CDS 45.0%
GCAGCAGCAGTTTATTCATG+GGG - chr1_1:74344049-74344068 Msa0043240:CDS 45.0%
CAGCAGCAGTTTATTCATGG+GGG - chr1_1:74344050-74344069 Msa0043240:CDS 45.0%
TTCTGTGCAGCAGGCTAATA+TGG - chr1_1:74344193-74344212 Msa0043240:CDS 45.0%
TCTGTGCAGCAGGCTAATAT+GGG - chr1_1:74344194-74344213 Msa0043240:CDS 45.0%
TCTGCTAGAAGGGATTGTTG+TGG + chr1_1:74344228-74344247 None:intergenic 45.0%
!!! GATTTTGGGGTCTGCTAGAA+GGG + chr1_1:74344238-74344257 None:intergenic 45.0%
TTGTTGAACCAATGTGGTGG+GGG + chr1_1:74344267-74344286 None:intergenic 45.0%
!!! CCGTCATTTCAGTTTTGGGT+AGG + chr1_1:74344322-74344341 None:intergenic 45.0%
! GCAGCCGTCATTTCAGTTTT+GGG + chr1_1:74344326-74344345 None:intergenic 45.0%
! AGCAGCCGTCATTTCAGTTT+TGG + chr1_1:74344327-74344346 None:intergenic 45.0%
!! TGCTGTTGATGCTGACTTGT+AGG + chr1_1:74344395-74344414 None:intergenic 45.0%
!! TGGTACTGTGAAGGCATTGT+GGG + chr1_1:74344542-74344561 None:intergenic 45.0%
AGCTGCTACTATGATGCAAC+CGG - chr1_1:74344571-74344590 Msa0043240:CDS 45.0%
ACTTGCTTATAGTGGCTGTG+AGG + chr1_1:74344645-74344664 None:intergenic 45.0%
! TCGTGTTTGCTACCTGTTTG+TGG - chr1_1:74344739-74344758 Msa0043240:CDS 45.0%
TAGGAAAGGAAATCGGTCCA+AGG - chr1_1:74344830-74344849 Msa0043240:CDS 45.0%
! CGGGTCATTGTTTCTTGACA+TGG - chr1_1:74344939-74344958 Msa0043240:CDS 45.0%
AGTTCAATCAAGGCTCCGAA+AGG + chr1_1:74345029-74345048 None:intergenic 45.0%
AGGGGAGGAATCAACGGAAT+CGG + chr1_1:74342269-74342288 None:intergenic 50.0%
TTCCCGCAACAACGACTCAT+GGG - chr1_1:74342291-74342310 Msa0043240:three_prime_UTR 50.0%
CATCAGACGGAGTTTGGATG+TGG + chr1_1:74342335-74342354 None:intergenic 50.0%
ACTGCACATCAGACGGAGTT+TGG + chr1_1:74342341-74342360 None:intergenic 50.0%
CTCCGTCTGATGTGCAGTTA+CGG - chr1_1:74342343-74342362 Msa0043240:three_prime_UTR 50.0%
CACCGTAACTGCACATCAGA+CGG + chr1_1:74342348-74342367 None:intergenic 50.0%
GTAGGATCGAGAATTTGCGG+TGG + chr1_1:74342691-74342710 None:intergenic 50.0%
! CCAGGTTGAGAAACACCATC+AGG + chr1_1:74342877-74342896 None:intergenic 50.0%
! CCTGATGGTGTTTCTCAACC+TGG - chr1_1:74342874-74342893 Msa0043240:CDS 50.0%
GTCTCCATCATAGGCGAATC+AGG + chr1_1:74342946-74342965 None:intergenic 50.0%
GACTTCTTCGTCTCCGTCTT+TGG - chr1_1:74342984-74343003 Msa0043240:CDS 50.0%
GGAGGCAAATTCGCCAAAGA+CGG + chr1_1:74343000-74343019 None:intergenic 50.0%
AGGGTGCATGTTGAAGATGG+TGG - chr1_1:74343024-74343043 Msa0043240:CDS 50.0%
!! GTTGAAGATGGTGGTTCTGG+TGG - chr1_1:74343033-74343052 Msa0043240:CDS 50.0%
!! ATGGTGGTTCTGGTGGTGTT+AGG - chr1_1:74343040-74343059 Msa0043240:CDS 50.0%
!! TGGTGGTTCTGGTGGTGTTA+GGG - chr1_1:74343041-74343060 Msa0043240:CDS 50.0%
! GCAGCAGGATCAGAAGGTTT+TGG - chr1_1:74343098-74343117 Msa0043240:CDS 50.0%
!! GTGTTGGTGGTATTGGACAG+AGG - chr1_1:74343154-74343173 Msa0043240:CDS 50.0%
! TGGTATTGGACAGAGGCTAC+AGG - chr1_1:74343161-74343180 Msa0043240:CDS 50.0%
ACTTGAACAACCTGTGGCTG+AGG + chr1_1:74343363-74343382 None:intergenic 50.0%
TCAAGCTCAGGCACAATCTC+AGG - chr1_1:74343401-74343420 Msa0043240:CDS 50.0%
CAACAAAAGTCAAGTGGCGG+TGG - chr1_1:74343465-74343484 Msa0043240:intron 50.0%
TCAACCTGGAACTACAAGGG+TGG - chr1_1:74343815-74343834 Msa0043240:CDS 50.0%
GTATCCACCCTTGTAGTTCC+AGG + chr1_1:74343822-74343841 None:intergenic 50.0%
CTGGATCCTACCATGTGGAT+CGG + chr1_1:74343859-74343878 None:intergenic 50.0%
CAGCAACATGTACAGGATCC+TGG - chr1_1:74343882-74343901 Msa0043240:CDS 50.0%
TGTTGAGGTTGTGGTTGCTG+CGG + chr1_1:74343993-74344012 None:intergenic 50.0%
TGAAGCTGTTGTTGCTGCTG+CGG + chr1_1:74344020-74344039 None:intergenic 50.0%
!!! GGATTTTGGGGTCTGCTAGA+AGG + chr1_1:74344239-74344258 None:intergenic 50.0%
!! GTAGGGGAGCACTTCTAATG+GGG + chr1_1:74344304-74344323 None:intergenic 50.0%
!! GGTAGGGGAGCACTTCTAAT+GGG + chr1_1:74344305-74344324 None:intergenic 50.0%
! TTAGGAGCCATGGACTGAGA+CGG + chr1_1:74344446-74344465 None:intergenic 50.0%
!! CTGGTACTGTGAAGGCATTG+TGG + chr1_1:74344543-74344562 None:intergenic 50.0%
CATCATAGTAGCAGCTGCCA+TGG + chr1_1:74344567-74344586 None:intergenic 50.0%
! GATAACGGTGGTCCGGTTGA+CGG + chr1_1:74342211-74342230 None:intergenic 55.0%
!! TAGTTGAGGTGTGGTGGTGG+TGG + chr1_1:74342244-74342263 None:intergenic 55.0%
GAATCGGGGTAGTTGAGGTG+TGG + chr1_1:74342253-74342272 None:intergenic 55.0%
CAACGGAATCGGGGTAGTTG+AGG + chr1_1:74342258-74342277 None:intergenic 55.0%
GGGAGGAATCAACGGAATCG+GGG + chr1_1:74342267-74342286 None:intergenic 55.0%
GGGGAGGAATCAACGGAATC+GGG + chr1_1:74342268-74342287 None:intergenic 55.0%
GGAACGAGGGGAGGAATCAA+CGG + chr1_1:74342275-74342294 None:intergenic 55.0%
AGTCGTTGTTGCGGGAACGA+GGG + chr1_1:74342288-74342307 None:intergenic 55.0%
GTTCCCGCAACAACGACTCA+TGG - chr1_1:74342290-74342309 Msa0043240:three_prime_UTR 55.0%
GTCCCATGAGTCGTTGTTGC+GGG + chr1_1:74342296-74342315 None:intergenic 55.0%
CGTCCCATGAGTCGTTGTTG+CGG + chr1_1:74342297-74342316 None:intergenic 55.0%
TTGGATGTGGCTGGAGGGAA+AGG + chr1_1:74342322-74342341 None:intergenic 55.0%
GGAGTTTGGATGTGGCTGGA+GGG + chr1_1:74342327-74342346 None:intergenic 55.0%
AGACGGAGTTTGGATGTGGC+TGG + chr1_1:74342331-74342350 None:intergenic 55.0%
CGTCTGATGTGCAGTTACGG+TGG - chr1_1:74342346-74342365 Msa0043240:three_prime_UTR 55.0%
! GAGCTTTGTCGGTTGGACGA+GGG + chr1_1:74342381-74342400 None:intergenic 55.0%
! AGAGCTTTGTCGGTTGGACG+AGG + chr1_1:74342382-74342401 None:intergenic 55.0%
GGATAAATCCGCGAGTGAGG+TGG + chr1_1:74342449-74342468 None:intergenic 55.0%
CGTGGATAAATCCGCGAGTG+AGG + chr1_1:74342452-74342471 None:intergenic 55.0%
CGACGAAACGGCACCGTTTA+TGG + chr1_1:74342743-74342762 None:intergenic 55.0%
GCCGTTTCGTCGCTTAATCG+AGG - chr1_1:74342751-74342770 Msa0043240:CDS 55.0%
TCCACTGGAGAAGCTCCTGA+TGG - chr1_1:74342859-74342878 Msa0043240:CDS 55.0%
ACCATCAGGAGCTTCTCCAG+TGG + chr1_1:74342863-74342882 None:intergenic 55.0%
TGGACAGAGGCTACAGGATG+AGG - chr1_1:74343167-74343186 Msa0043240:CDS 55.0%
GGACAGAGGCTACAGGATGA+GGG - chr1_1:74343168-74343187 Msa0043240:CDS 55.0%
! GTAGTTGGCACTGGAGGATG+AGG + chr1_1:74343216-74343235 None:intergenic 55.0%
ATCGGATCATGGTGTGCCTG+TGG - chr1_1:74343317-74343336 Msa0043240:CDS 55.0%
TCGGATCATGGTGTGCCTGT+GGG - chr1_1:74343318-74343337 Msa0043240:CDS 55.0%
ACAACCTGTGGCTGAGGAGT+TGG + chr1_1:74343357-74343376 None:intergenic 55.0%
AAAGTCAAGTGGCGGTGGCT+CGG - chr1_1:74343470-74343489 Msa0043240:intron 55.0%
CGATCCACATGGTAGGATCC+AGG - chr1_1:74343857-74343876 Msa0043240:CDS 55.0%
TGCACCTGGATCCTACCATG+TGG + chr1_1:74343864-74343883 None:intergenic 55.0%
CCTGTACATGTTGCTGCACC+TGG + chr1_1:74343878-74343897 None:intergenic 55.0%
CCAGGTGCAGCAACATGTAC+AGG - chr1_1:74343875-74343894 Msa0043240:CDS 55.0%
GAGGCTGTTGTTGCTGCTGA+TGG + chr1_1:74343962-74343981 None:intergenic 55.0%
TGCGGCTGATGTTGAGGTTG+TGG + chr1_1:74344002-74344021 None:intergenic 55.0%
TGATGGGGCTGTTGCTGTGA+TGG + chr1_1:74344125-74344144 None:intergenic 55.0%
! GTGGGGGTTGGAGGATTTTG+GGG + chr1_1:74344251-74344270 None:intergenic 55.0%
! GGTGGGGGTTGGAGGATTTT+GGG + chr1_1:74344252-74344271 None:intergenic 55.0%
! TGGTGGGGGTTGGAGGATTT+TGG + chr1_1:74344253-74344272 None:intergenic 55.0%
! TGAACCAATGTGGTGGGGGT+TGG + chr1_1:74344263-74344282 None:intergenic 55.0%
!! GGGTAGGGGAGCACTTCTAA+TGG + chr1_1:74344306-74344325 None:intergenic 55.0%
GCTGCTTACAGAGCTGCAAC+TGG - chr1_1:74344344-74344363 Msa0043240:CDS 55.0%
GCTTACAGAGCTGCAACTGG+AGG - chr1_1:74344347-74344366 Msa0043240:CDS 55.0%
!! CTGAGACGGATGGTGGATCT+GGG + chr1_1:74344432-74344451 None:intergenic 55.0%
!! ACTGAGACGGATGGTGGATC+TGG + chr1_1:74344433-74344452 None:intergenic 55.0%
GCCTTCACAGTACCAGACCA+TGG - chr1_1:74344547-74344566 Msa0043240:CDS 55.0%
GCCATGGTCTGGTACTGTGA+AGG + chr1_1:74344551-74344570 None:intergenic 55.0%
TAGTAGCAGCTGCCATGGTC+TGG + chr1_1:74344562-74344581 None:intergenic 55.0%
GGATGCTGTGCAGGAACTTC+CGG + chr1_1:74344593-74344612 None:intergenic 55.0%
! TGCTGCTTCATGCCGTCTGA+CGG + chr1_1:74344614-74344633 None:intergenic 55.0%
! GTTGACGGCGTTGGAGGTTG+GGG + chr1_1:74342196-74342215 None:intergenic 60.0%
! GGTTGACGGCGTTGGAGGTT+GGG + chr1_1:74342197-74342216 None:intergenic 60.0%
CAACCTCCAACGCCGTCAAC+CGG - chr1_1:74342196-74342215 Msa0043240:three_prime_UTR 60.0%
! CACGGAGGATAACGGTGGTC+CGG + chr1_1:74342218-74342237 None:intergenic 60.0%
GGTGGAGCCACGGAGGATAA+CGG + chr1_1:74342226-74342245 None:intergenic 60.0%
GGGTAGTTGAGGTGTGGTGG+TGG + chr1_1:74342247-74342266 None:intergenic 60.0%
TCGGGGTAGTTGAGGTGTGG+TGG + chr1_1:74342250-74342269 None:intergenic 60.0%
GTCGTTGTTGCGGGAACGAG+GGG + chr1_1:74342287-74342306 None:intergenic 60.0%
GAGTCGTTGTTGCGGGAACG+AGG + chr1_1:74342289-74342308 None:intergenic 60.0%
CGGAGTTTGGATGTGGCTGG+AGG + chr1_1:74342328-74342347 None:intergenic 60.0%
!!! CAAGGTTTTGGAGAGGCGCG+TGG + chr1_1:74342470-74342489 None:intergenic 60.0%
GCAGCAGCAGCAGGATCAGA+AGG - chr1_1:74343092-74343111 Msa0043240:CDS 60.0%
! GTTGGCACTGGAGGATGAGG+CGG + chr1_1:74343213-74343232 None:intergenic 60.0%
TCCTCCAGTGCCAACTACGC+TGG - chr1_1:74343218-74343237 Msa0043240:CDS 60.0%
TCCAGTGCCAACTACGCTGG+CGG - chr1_1:74343221-74343240 Msa0043240:CDS 60.0%
! GCGGCGGTTGGTGTTCCAAT+TGG - chr1_1:74343240-74343259 Msa0043240:CDS 60.0%
ACCACCAACTCCTCAGCCAC+AGG - chr1_1:74343350-74343369 Msa0043240:CDS 60.0%
ACCTGTGGCTGAGGAGTTGG+TGG + chr1_1:74343354-74343373 None:intergenic 60.0%
GGTTGCTGCGGCTGATGTTG+AGG + chr1_1:74343981-74344000 None:intergenic 60.0%
TGCTGCTGCGGCTGATGTTG+AGG + chr1_1:74344008-74344027 None:intergenic 60.0%
ACAGCAACAGCCCCATCACC+AGG - chr1_1:74344127-74344146 Msa0043240:CDS 60.0%
CCTTGTTGGGGCTGTCTTGC+AGG + chr1_1:74344164-74344183 None:intergenic 60.0%
CCTGCAAGACAGCCCCAACA+AGG - chr1_1:74344161-74344180 Msa0043240:CDS 60.0%
TCCTCCAACCCCCACCACAT+TGG - chr1_1:74344256-74344275 Msa0043240:CDS 60.0%
! ACCAATGTGGTGGGGGTTGG+AGG + chr1_1:74344260-74344279 None:intergenic 60.0%
! CCATGGACTGAGACGGATGG+TGG + chr1_1:74344439-74344458 None:intergenic 60.0%
CCACCATCCGTCTCAGTCCA+TGG - chr1_1:74344436-74344455 Msa0043240:CDS 60.0%
! GAGCCATGGACTGAGACGGA+TGG + chr1_1:74344442-74344461 None:intergenic 60.0%
GGCAGCAGGATTAGGAGCCA+TGG + chr1_1:74344456-74344475 None:intergenic 60.0%
!! GAAGGCATTGTGGGCGCCAT+AGG + chr1_1:74344533-74344552 None:intergenic 60.0%
CCTGCACAGCATCCGTCAGA+CGG - chr1_1:74344599-74344618 Msa0043240:CDS 60.0%
GTTGGGGTTGCGCCTCCATG+AGG + chr1_1:74342180-74342199 None:intergenic 65.0%
! CGGTTGACGGCGTTGGAGGT+TGG + chr1_1:74342198-74342217 None:intergenic 65.0%
CGGACCACCGTTATCCTCCG+TGG - chr1_1:74342216-74342235 Msa0043240:three_prime_UTR 65.0%
! GGAGCCACGGAGGATAACGG+TGG + chr1_1:74342223-74342242 None:intergenic 65.0%
!! GTGTGGTGGTGGTGGAGCCA+CGG + chr1_1:74342236-74342255 None:intergenic 65.0%
GTTGTTGCGGGAACGAGGGG+AGG + chr1_1:74342284-74342303 None:intergenic 65.0%
CGGTTGGACGAGGGACGATG+TGG + chr1_1:74342372-74342391 None:intergenic 65.0%
TGAACGCGCCACCTCACTCG+CGG - chr1_1:74342438-74342457 Msa0043240:three_prime_UTR 65.0%
GCAACAGCAGCAGCAGCAGC+AGG - chr1_1:74343083-74343102 Msa0043240:CDS 65.0%
! GCCAGCGTAGTTGGCACTGG+AGG + chr1_1:74343222-74343241 None:intergenic 65.0%
AGTGCCAACTACGCTGGCGG+CGG - chr1_1:74343224-74343243 Msa0043240:CDS 65.0%
CTGGCAGGGGCAGCAGGATT+AGG + chr1_1:74344464-74344483 None:intergenic 65.0%
GCATAACTGGCAGGGGCAGC+AGG + chr1_1:74344470-74344489 None:intergenic 65.0%
! CCGTCTGACGGATGCTGTGC+AGG + chr1_1:74344602-74344621 None:intergenic 65.0%
! GGTCCGGTTGACGGCGTTGG+AGG + chr1_1:74342202-74342221 None:intergenic 70.0%
GGTGGTCCGGTTGACGGCGT+TGG + chr1_1:74342205-74342224 None:intergenic 70.0%
!! TGGTGGTGGTGGAGCCACGG+AGG + chr1_1:74342233-74342252 None:intergenic 70.0%
GCCGCCAGCGTAGTTGGCAC+TGG + chr1_1:74343225-74343244 None:intergenic 70.0%
CCAACCGCCGCCAGCGTAGT+TGG + chr1_1:74343231-74343250 None:intergenic 70.0%
CCAACTACGCTGGCGGCGGT+TGG - chr1_1:74343228-74343247 Msa0043240:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 74342055 74345127 74342055 ID=Msa0043240;Name=Msa0043240
chr1_1 mRNA 74342055 74345127 74342055 ID=Msa0043240-mRNA-1;Parent=Msa0043240;Name=Msa0043240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=126|1|1|1|1|1|2|469|749
chr1_1 exon 74342055 74343433 74342055 ID=Msa0043240-mRNA-1:exon:25018;Parent=Msa0043240-mRNA-1
chr1_1 exon 74343662 74345127 74343662 ID=Msa0043240-mRNA-1:exon:25017;Parent=Msa0043240-mRNA-1
chr1_1 five_prime_UTR 74345002 74345127 74345002 ID=Msa0043240-mRNA-1:five_prime_utr;Parent=Msa0043240-mRNA-1
chr1_1 CDS 74343662 74345001 74343662 ID=Msa0043240-mRNA-1:cds;Parent=Msa0043240-mRNA-1
chr1_1 CDS 74342524 74343433 74342524 ID=Msa0043240-mRNA-1:cds;Parent=Msa0043240-mRNA-1
chr1_1 three_prime_UTR 74342055 74342523 74342055 ID=Msa0043240-mRNA-1:three_prime_utr;Parent=Msa0043240-mRNA-1
Gene Sequence

>Msa0043240

ATGGAGGCGCAACCCCAACCTCCAACGCCGTCAACCGGACCACCGTTATCCTCCGTGGCTCCACCACCACCACACCTCAACTACCCCGATTCCGTTGATTCCTCCCCTCGTTCCCGCAACAACGACTCATGGGACGAACCTTTCCCTCCAGCCACATCCAAACTCCGTCTGATGTGCAGTTACGGTGGCCACATCGTCCCTCGTCCAACCGACAAAGCTCTCTGTTATGTCGGCGGTGACACTCGCATCGTTGTTGTTGAACGCGCCACCTCACTCGCGGATTTATCCACGCGCCTCTCCAAAACCTTGCTTAATGGAAGACCTTTCACTTTCAAGTATCAGCTTCCAAACGAAGACCTAGATTCGTTAATCTCCGTTTCAACCGATGAAGATTTAGAAAACATGATCGATGAATACGATCGAACGAATTCTACGAATTCGTCTGTGAAACCCTCGCGAATTCGTCTTTTTCTGTTTCCATCGAAACCTGAATCTGCTCAGTCAATTCCACCGCAAATTCTCGATCCTACTGTTAGATCCGGTGAATGGTTCTTTGATACCATAAACGGTGCCGTTTCGTCGCTTAATCGAGGTTTTTCTGATTCTGCTGCTTCTTCTGTGAATCATCTTTTAGGTCTTGATGATGATGTTGCTGGGAATAATCATATTGAACAAGGTTCCACTGGAGAAGCTCCTGATGGTGTTTCTCAACCTGGATCTTTTGGGAATTGTAAGAATTTGAAGCAGGATGTTCATTCTGTTCCTGATTCGCCTATGATGGAGACTTCTTCGTCCTTTGGTTCGACTTCTTCGTCTCCGTCTTTGGCGAATTTGCCTCCTATTAGGGTGCATGTTGAAGATGGTGGTTCTGGTGGTGTTAGGGTTCAACAGCAGCAACAATTGCAACAGCAGCAGCAGCAGCAGGATCAGAAGGTTTTGGGGATTGATGAACAGTTTGCTCAAATGGTTGTTGGTGTTGGTGGTATTGGACAGAGGCTACAGGATGAGGGTTTTGCTGTCATGTCTTCACCGCCTCATCCTCCAGTGCCAACTACGCTGGCGGCGGTTGGTGTTCCAATTGGTTCTGCTGTGGTTGTTGGTGATTACCAGAATAGGGTATTCTCTGATGATGAGAGATCGGATCATGGTGTGCCTGTGGGATATAGAAAACCACCAACTCCTCAGCCACAGGTTGTTCAAGTTCAACCTCAAGCTCAAAATCAAGCTCAGGCACAATCTCAGGCACAGTCACAAGCACAGACACAGTCACAAGCTCCTCAATTTCAACAAAAGTCAAGTGGCGGTGGCTCGGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAGTAGTCTTTCAAATGCGATGTCACGTCAAAAACCTGTTGTTTATCAAGAGCAAATTCAAATTCAACCTGGAACTACAAGGGTGGATACAAAAATCAATTTGTCCGATCCACATGGTAGGATCCAGGTGCAGCAACATGTACAGGATCCTGGTTATTTGCTGCAACAGCAATTTGAACTCCAGCAGCAGCAACAACAATTTGAACTCCATCAGCAGCAACAACAGCCTCAACATCAGCCGCAGCAACCACAACCTCAACATCAGCCGCAGCAGCAACAACAGCTTCAACATCATCAGCAGCAGCAGTTTATTCATGGGGGACACTACATTCATCATAACCCTGCAATTCCTACATACTATCCTGTATATCCATCACAGCAACAGCCCCATCACCAGGTTTACTATGTACCTGCAAGACAGCCCCAACAAGGTTACAATATTTCTGTGCAGCAGGCTAATATGGGTGAATCTGCCACAACAATCCCTTCTAGCAGACCCCAAAATCCTCCAACCCCCACCACATTGGTTCAACAAAATGCAGCTTACAACCCCATTAGAAGTGCTCCCCTACCCAAAACTGAAATGACGGCTGCTGCTTACAGAGCTGCAACTGGAGGCAGTCCTCAATTTGTGCAAGTTCCTACAAGTCAGCATCAACAGCAGTATGTCACTTACTCCCAGATCCACCATCCGTCTCAGTCCATGGCTCCTAATCCTGCTGCCCCTGCCAGTTATGCTTATGAATATGCTGATCCTGCTCAAGTATACTACTCTCAGCCTATGGCGCCCACAATGCCTTCACAGTACCAGACCATGGCAGCTGCTACTATGATGCAACCGGAAGTTCCTGCACAGCATCCGTCAGACGGCATGAAGCAGCAGATAAGAACCTCACAGCCACTATAA
Protein sequence

>Msa0043240

MEAQPQPPTPSTGPPLSSVAPPPPHLNYPDSVDSSPRSRNNDSWDEPFPPATSKLRLMCSYGGHIVPRPTDKALCYVGGDTRIVVVERATSLADLSTRLSKTLLNGRPFTFKYQLPNEDLDSLISVSTDEDLENMIDEYDRTNSTNSSVKPSRIRLFLFPSKPESAQSIPPQILDPTVRSGEWFFDTINGAVSSLNRGFSDSAASSVNHLLGLDDDVAGNNHIEQGSTGEAPDGVSQPGSFGNCKNLKQDVHSVPDSPMMETSSSFGSTSSSPSLANLPPIRVHVEDGGSGGVRVQQQQQLQQQQQQQDQKVLGIDEQFAQMVVGVGGIGQRLQDEGFAVMSSPPHPPVPTTLAAVGVPIGSAVVVGDYQNRVFSDDERSDHGVPVGYRKPPTPQPQVVQVQPQAQNQAQAQSQAQSQAQTQSQAPQFQQKSSGGGSDLPSPDSVSSDSSLSNAMSRQKPVVYQEQIQIQPGTTRVDTKINLSDPHGRIQVQQHVQDPGYLLQQQFELQQQQQQFELHQQQQQPQHQPQQPQPQHQPQQQQQLQHHQQQQFIHGGHYIHHNPAIPTYYPVYPSQQQPHHQVYYVPARQPQQGYNISVQQANMGESATTIPSSRPQNPPTPTTLVQQNAAYNPIRSAPLPKTEMTAAAYRAATGGSPQFVQVPTSQHQQQYVTYSQIHHPSQSMAPNPAAPASYAYEYADPAQVYYSQPMAPTMPSQYQTMAAATMMQPEVPAQHPSDGMKQQIRTSQPL*