AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1294960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1294960 MtrunA17_Chr8g0372241 95.436 241 3 1 1 233 1 241 1.45e-165 456
Msa1294960 MtrunA17_Chr5g0405011 72.016 243 48 4 1 233 1 233 4.44e-114 326
Msa1294960 MtrunA17_Chr3g0145131 75.132 189 39 1 53 233 38 226 4.32e-97 282
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1294960 AT2G16460.1 79.365 189 31 1 53 233 42 230 6.30e-105 303
Msa1294960 AT3G51090.1 78.307 189 33 1 53 233 110 298 6.06e-101 295
Msa1294960 AT3G51090.2 74.000 150 31 1 53 194 110 259 1.52e-71 219
Msa1294960 AT2G16460.2 76.744 129 22 1 53 173 42 170 2.14e-64 198
Msa1294960 AT2G35090.1 30.319 188 88 5 46 233 13 157 2.88e-17 76.6
Msa1294960 AT2G35070.2 29.070 172 81 4 58 229 23 153 2.70e-15 71.2
Msa1294960 AT2G35070.1 29.070 172 81 4 58 229 23 153 2.70e-15 71.2

Find 70 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCACTTCTGATTTGAATT+TGG 0.134443 8_3:-52890248 None:intergenic
TTATCTGGATTAAGAGAATT+AGG 0.165634 8_3:+52889391 Msa1294960:CDS
ATAATTAAAGAGTGAATTTC+AGG 0.213614 8_3:-52889335 None:intergenic
CCCTATCAAGTTTGTTGGTC+AGG 0.257364 8_3:-52892475 None:intergenic
TTGTAGGTTAGGAGATTAGA+AGG 0.265451 8_3:+52889677 Msa1294960:intron
AAAGATCAAGAGTAGCTATT+TGG 0.271903 8_3:+52893194 Msa1294960:three_prime_UTR
ATTAAAATCAATGCAGAGTT+AGG 0.286400 8_3:-52889230 None:intergenic
AGACATATGCGACAATTATC+TGG 0.294556 8_3:+52889376 Msa1294960:CDS
CTCCGCATCTTGATGTAAAC+AGG 0.312050 8_3:+52893131 Msa1294960:exon
AAGGCCCAACTTTGCCTAAT+GGG 0.340803 8_3:-52893291 None:intergenic
ATAGCCTCAGCTTGCTTTGA+AGG 0.349560 8_3:-52889710 None:intergenic
AAAGGCCCAACTTTGCCTAA+TGG 0.367455 8_3:-52893292 None:intergenic
TGAAAATGTTTCTCAAGCTT+TGG 0.367856 8_3:+52889769 Msa1294960:CDS
GATAAACACACGCATCTTAG+AGG 0.372389 8_3:+52893403 Msa1294960:three_prime_UTR
ACCTGACCAACAAACTTGAT+AGG 0.380373 8_3:+52892474 Msa1294960:CDS
TATCTGGATTAAGAGAATTA+GGG 0.388579 8_3:+52889392 Msa1294960:CDS
TCATTCTTTAAGAGCACAAC+TGG 0.394272 8_3:+52893034 Msa1294960:CDS
AGCTCCCCATTAGGCAAAGT+TGG 0.401817 8_3:+52893286 Msa1294960:three_prime_UTR
TTCACTCTTTAATTATTCAA+TGG 0.403420 8_3:+52889342 Msa1294960:exon
CTTGTTTCAATCTCTGCCGT+TGG 0.410054 8_3:+52893098 Msa1294960:CDS
ACTTACCCTATCAAGTTTGT+TGG 0.414712 8_3:-52892480 None:intergenic
GAAGCTGAAGATGAAAAGTA+TGG 0.427725 8_3:-52889472 None:intergenic
TTGTTTCAATCTCTGCCGTT+GGG 0.441684 8_3:+52893099 Msa1294960:CDS
TGATTTGAATTTGGACAGGT+TGG 0.450293 8_3:-52890239 None:intergenic
CTTGATGTAAACAGGGTGTC+TGG 0.457391 8_3:+52893139 Msa1294960:exon
ATGCAGAGTTAGGTTCTGTA+AGG 0.463097 8_3:-52889220 None:intergenic
GATTGGATTTGAACCTTGAA+AGG 0.467374 8_3:+52892309 Msa1294960:CDS
ACTTCACTTACAGGAGAACT+AGG 0.471205 8_3:+52892417 Msa1294960:intron
ACTGAAGTAGATAATAATCC+AGG 0.487623 8_3:-52893426 None:intergenic
GAGGAACAAGTGTTTGCCAT+TGG 0.490704 8_3:-52889533 None:intergenic
CTTCTGATTTGAATTTGGAC+AGG 0.492497 8_3:-52890243 None:intergenic
AGTCACTGCTGGACAGCGAT+TGG 0.496124 8_3:+52892292 Msa1294960:CDS
ATAGTTATATTCGCGGAAAG+AGG 0.498887 8_3:-52889264 None:intergenic
GCTCCCCATTAGGCAAAGTT+GGG 0.515395 8_3:+52893287 Msa1294960:three_prime_UTR
CTTGTTCCTCGTTGACACAT+TGG 0.518676 8_3:+52889546 Msa1294960:CDS
ATTGGATTTGAACCTTGAAA+GGG 0.519704 8_3:+52892310 Msa1294960:CDS
GTATTCATTCGCCATGCTTG+TGG 0.526111 8_3:+52893354 Msa1294960:three_prime_UTR
AGAAGATGCGTAGTGAATTG+AGG 0.526242 8_3:+52892155 Msa1294960:CDS
AACATGAAACTGAAAAGCTT+AGG 0.532342 8_3:+52892122 Msa1294960:CDS
CCTGACCAACAAACTTGATA+GGG 0.533674 8_3:+52892475 Msa1294960:CDS
GAGATGGACAAAGTCACTGC+TGG 0.542109 8_3:+52892281 Msa1294960:CDS
CTTCACTTACAGGAGAACTA+GGG 0.546862 8_3:+52892418 Msa1294960:intron
GAAGGAACTAGCTCCCCATT+AGG 0.556088 8_3:+52893277 Msa1294960:three_prime_UTR
GTTAGGAGATTAGAAGGGCA+AGG 0.559208 8_3:+52889683 Msa1294960:CDS
ACACACGCATCTTAGAGGCC+TGG 0.560712 8_3:+52893408 Msa1294960:three_prime_UTR
TGTAGGTTAGGAGATTAGAA+GGG 0.562000 8_3:+52889678 Msa1294960:intron
TAGTTATATTCGCGGAAAGA+GGG 0.572033 8_3:-52889263 None:intergenic
TCTCAATTGGTCAAATCCAA+TGG 0.575005 8_3:+52889517 Msa1294960:CDS
AGGCCCAACTTTGCCTAATG+GGG 0.580770 8_3:-52893290 None:intergenic
TACATAACTAGTGGAGCTGA+AGG 0.590124 8_3:+52893259 Msa1294960:three_prime_UTR
ATTTGAAGCGAAGACGATGA+TGG 0.595196 8_3:-52889430 None:intergenic
GAGGTCATAAAATACTGCAT+AGG 0.596780 8_3:+52893071 Msa1294960:CDS
ACTGGAAGCAGCTAAATATG+AGG 0.606726 8_3:+52893052 Msa1294960:CDS
GCGGAGAACAGCAAGCCCAA+CGG 0.607012 8_3:-52893114 None:intergenic
ATCAGAAGTGCAGAGCTCAC+AGG 0.616312 8_3:+52890258 Msa1294960:CDS
GTGCAAATATGCCACAAGCA+TGG 0.622828 8_3:-52893365 None:intergenic
AATTTACAGTACATAACTAG+TGG 0.623466 8_3:+52893250 Msa1294960:three_prime_UTR
TGGATTTGAACCTTGAAAGG+GGG 0.629254 8_3:+52892312 Msa1294960:CDS
TTGGATTTGAACCTTGAAAG+GGG 0.640554 8_3:+52892311 Msa1294960:CDS
TGCAGAGTTAGGTTCTGTAA+GGG 0.642171 8_3:-52889219 None:intergenic
TCGCATATGTCTACAAATCG+CGG 0.653170 8_3:-52889365 None:intergenic
TCAGTTAACATTATAAAACC+AGG 0.664965 8_3:+52893166 Msa1294960:three_prime_UTR
ATGGCGAATGAATACACGAA+AGG 0.669117 8_3:-52893346 None:intergenic
CACTTACAGGAGAACTAGGG+AGG 0.671322 8_3:+52892421 Msa1294960:intron
AGTGCCTTCAAAGCAAGCTG+AGG 0.676880 8_3:+52889706 Msa1294960:CDS
ACCCTGTTTACATCAAGATG+CGG 0.680795 8_3:-52893133 None:intergenic
TCCGCATCTTGATGTAAACA+GGG 0.681732 8_3:+52893132 Msa1294960:exon
GTTAACATTATAAAACCAGG+TGG 0.687516 8_3:+52893169 Msa1294960:three_prime_UTR
TTTGTGATACAGGTATGAGA+TGG 0.695301 8_3:+52892265 Msa1294960:intron
CAAGAGCCAATGTGTCAACG+AGG 0.730525 8_3:-52889552 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATAACAAAAAAG+GGG - chr8_3:52889594-52889613 None:intergenic 10.0%
!! AAATTTAAAAACCATATTTA+TGG - chr8_3:52890467-52890486 None:intergenic 10.0%
!! AAAAAAAATAACAAAAAAGG+GGG - chr8_3:52889593-52889612 None:intergenic 15.0%
!! CACTAAAAAAACATTATATT+TGG - chr8_3:52889834-52889853 None:intergenic 15.0%
!! TTAATTAATTATGACTTATG+AGG + chr8_3:52890287-52890306 Msa1294960:intron 15.0%
!! TATTGTTTGCATTTATATAT+TGG + chr8_3:52890522-52890541 Msa1294960:intron 15.0%
!!! TTTATTTTAACCTAATACTT+GGG - chr8_3:52890581-52890600 None:intergenic 15.0%
!! AAGTATTAGGTTAAAATAAA+GGG + chr8_3:52890581-52890600 Msa1294960:intron 15.0%
!!! AAAACAAAATTTCTTTTTGT+GGG - chr8_3:52890645-52890664 None:intergenic 15.0%
!! TCTAAATCTTAAAATTGAAT+CGG - chr8_3:52891001-52891020 None:intergenic 15.0%
!! TACAAAATGATTAAAAAACA+AGG - chr8_3:52891072-52891091 None:intergenic 15.0%
!!! ATCTTTTAAATCAATTCTTT+AGG + chr8_3:52891811-52891830 Msa1294960:intron 15.0%
!!! CATTAATTCATTTGATTTAT+TGG + chr8_3:52892023-52892042 Msa1294960:intron 15.0%
!!! TTAATTTCAAACTCAATTTT+TGG + chr8_3:52892832-52892851 Msa1294960:intron 15.0%
!!! AAAAAGTATAGTTATATTCG+CGG - chr8_3:52889274-52889293 None:intergenic 20.0%
!! ATAATTAAAGAGTGAATTTC+AGG - chr8_3:52889338-52889357 None:intergenic 20.0%
!! TTCACTCTTTAATTATTCAA+TGG + chr8_3:52889342-52889361 Msa1294960:exon 20.0%
!!! TTTTAGTGAATCGTTAATTT+AGG + chr8_3:52889846-52889865 Msa1294960:intron 20.0%
!! TCAGATTTATTGAATCAATT+TGG + chr8_3:52890005-52890024 Msa1294960:intron 20.0%
!!! TTTGAAGTTGTATGATTTTT+AGG + chr8_3:52890331-52890350 Msa1294960:intron 20.0%
!!! ATATATTGGCAAAACATTTT+AGG + chr8_3:52890536-52890555 Msa1294960:intron 20.0%
!!! TATATTGGCAAAACATTTTA+GGG + chr8_3:52890537-52890556 Msa1294960:intron 20.0%
!!! TTATTTTAACCTAATACTTG+GGG - chr8_3:52890580-52890599 None:intergenic 20.0%
!!! CTTTATTTTAACCTAATACT+TGG - chr8_3:52890582-52890601 None:intergenic 20.0%
!! CAAGTATTAGGTTAAAATAA+AGG + chr8_3:52890580-52890599 Msa1294960:intron 20.0%
!!! CAAAACAAAATTTCTTTTTG+TGG - chr8_3:52890646-52890665 None:intergenic 20.0%
!!! ATGATGGGTATTATATTTTA+GGG - chr8_3:52890776-52890795 None:intergenic 20.0%
!!! AATGATGGGTATTATATTTT+AGG - chr8_3:52890777-52890796 None:intergenic 20.0%
!! ACATCAATAAAACATGTTAA+TGG + chr8_3:52890810-52890829 Msa1294960:intron 20.0%
!!! ACTTTCAAAACAATGTATTT+TGG + chr8_3:52890949-52890968 Msa1294960:intron 20.0%
!!! CTTTCAAAACAATGTATTTT+GGG + chr8_3:52890950-52890969 Msa1294960:intron 20.0%
!!! TTTGGTATTATTTTTTGTGA+AGG + chr8_3:52891275-52891294 Msa1294960:intron 20.0%
!!! TTTTTTGTGAAGGATATAAT+TGG + chr8_3:52891285-52891304 Msa1294960:intron 20.0%
!!! TTTTTGTGAAGGATATAATT+GGG + chr8_3:52891286-52891305 Msa1294960:intron 20.0%
!! ACGAAACATATTTGAATATT+TGG - chr8_3:52891703-52891722 None:intergenic 20.0%
!! AATAATACTTCATAGATATG+TGG + chr8_3:52891743-52891762 Msa1294960:intron 20.0%
!!! GAAAAATTACCCAATTTTAA+TGG - chr8_3:52892532-52892551 None:intergenic 20.0%
!!! ACTAAAATAGACAGAATTTT+TGG - chr8_3:52892650-52892669 None:intergenic 20.0%
!! AATAGGGCATAAAAAAAAAA+AGG - chr8_3:52893313-52893332 None:intergenic 20.0%
!! AGGAAATTGTAAAAAGAATA+GGG - chr8_3:52893329-52893348 None:intergenic 20.0%
!! AAGGAAATTGTAAAAAGAAT+AGG - chr8_3:52893330-52893349 None:intergenic 20.0%
! ATTAAAATCAATGCAGAGTT+AGG - chr8_3:52889233-52889252 None:intergenic 25.0%
! TTATCTGGATTAAGAGAATT+AGG + chr8_3:52889391-52889410 Msa1294960:CDS 25.0%
! TATCTGGATTAAGAGAATTA+GGG + chr8_3:52889392-52889411 Msa1294960:CDS 25.0%
!!! ATCTTTTTCACAATCTCAAT+TGG + chr8_3:52889504-52889523 Msa1294960:CDS 25.0%
! ATTATTTATCATTGCAGGAA+GGG + chr8_3:52890414-52890433 Msa1294960:intron 25.0%
! TAAAAACCATATTTATGGCA+TGG - chr8_3:52890462-52890481 None:intergenic 25.0%
!!! TATTTTAACCTAATACTTGG+GGG - chr8_3:52890579-52890598 None:intergenic 25.0%
!! AAAACATGTTAATGGATGTT+AGG + chr8_3:52890818-52890837 Msa1294960:intron 25.0%
!! ATTAGAATAAAGACCCATTT+TGG + chr8_3:52891100-52891119 Msa1294960:intron 25.0%
! AAAATGTTAGGGAGTAATTT+GGG - chr8_3:52891176-52891195 None:intergenic 25.0%
!! AAAAGATTAAAGACCCATTT+TGG - chr8_3:52891333-52891352 None:intergenic 25.0%
! TTCAAAAGTTTAAACTTCCA+TGG + chr8_3:52891392-52891411 Msa1294960:intron 25.0%
! TCAAAAGTTTAAACTTCCAT+GGG + chr8_3:52891393-52891412 Msa1294960:intron 25.0%
! TGATGATCTTCAGATATAAA+AGG - chr8_3:52891538-52891557 None:intergenic 25.0%
! ATTAAATGAGATAAACCTTG+AGG - chr8_3:52891654-52891673 None:intergenic 25.0%
! AGGTTTATCTCATTTAATCA+TGG + chr8_3:52891656-52891675 Msa1294960:intron 25.0%
! GGTTTATCTCATTTAATCAT+GGG + chr8_3:52891657-52891676 Msa1294960:intron 25.0%
!!! CTATGAAGTATTATTTTGAC+AGG - chr8_3:52891738-52891757 None:intergenic 25.0%
! TGTACATTATATAAGCTTGT+TGG + chr8_3:52891862-52891881 Msa1294960:intron 25.0%
! ATTATGGCCAAGAAAAAAAA+CGG - chr8_3:52891968-52891987 None:intergenic 25.0%
!! ATTTGATTTATTGGTGAGAA+TGG + chr8_3:52892032-52892051 Msa1294960:intron 25.0%
! TAATGAAAAGCTTATGATTC+AGG + chr8_3:52892078-52892097 Msa1294960:intron 25.0%
! AATGAAAAGCTTATGATTCA+GGG + chr8_3:52892079-52892098 Msa1294960:intron 25.0%
!! TGATATTTTACTTCACTTAC+AGG + chr8_3:52892408-52892427 Msa1294960:intron 25.0%
! ACAGTAGAAACCATTAAAAT+TGG + chr8_3:52892519-52892538 Msa1294960:intron 25.0%
! CAGTAGAAACCATTAAAATT+GGG + chr8_3:52892520-52892539 Msa1294960:intron 25.0%
! TCCATAAAAAAGACACTTTA+GGG - chr8_3:52892564-52892583 None:intergenic 25.0%
! TTCCATAAAAAAGACACTTT+AGG - chr8_3:52892565-52892584 None:intergenic 25.0%
! TTGATCACTTATAGTCAAAT+AGG - chr8_3:52892725-52892744 None:intergenic 25.0%
! TCAGTTAACATTATAAAACC+AGG + chr8_3:52893166-52893185 Msa1294960:three_prime_UTR 25.0%
! AATTTACAGTACATAACTAG+TGG + chr8_3:52893250-52893269 Msa1294960:three_prime_UTR 25.0%
! TTTTCTTTTCATCGTATCGT+TGG + chr8_3:52889292-52889311 Msa1294960:five_prime_UTR 30.0%
! TTTCTTTTCATCGTATCGTT+GGG + chr8_3:52889293-52889312 Msa1294960:five_prime_UTR 30.0%
!!! TTTTTTACTCTGTCCATGTT+TGG + chr8_3:52889614-52889633 Msa1294960:intron 30.0%
ATTCATTGTGATTCCAAACA+TGG - chr8_3:52889630-52889649 None:intergenic 30.0%
!!! TGACGTATTGTTTTGAAATG+CGG + chr8_3:52889651-52889670 Msa1294960:intron 30.0%
TGAAAATGTTTCTCAAGCTT+TGG + chr8_3:52889769-52889788 Msa1294960:CDS 30.0%
GGAGAAGTTAATATAATCGA+CGG - chr8_3:52889947-52889966 None:intergenic 30.0%
GTCGATTATATTAACTTCTC+CGG + chr8_3:52889946-52889965 Msa1294960:intron 30.0%
TCGATTATATTAACTTCTCC+GGG + chr8_3:52889947-52889966 Msa1294960:intron 30.0%
!!! CGTCATTTTTCAAAATTACC+CGG - chr8_3:52889968-52889987 None:intergenic 30.0%
! TACTCAACTTTTACGAGTTT+AGG + chr8_3:52890054-52890073 Msa1294960:intron 30.0%
! ACTCAACTTTTACGAGTTTA+GGG + chr8_3:52890055-52890074 Msa1294960:intron 30.0%
!!! TCCTTTTTTATGTGATTCTG+TGG + chr8_3:52890104-52890123 Msa1294960:intron 30.0%
!!! CCTTTTTTATGTGATTCTGT+GGG + chr8_3:52890105-52890124 Msa1294960:intron 30.0%
! GTCGACTTTAATTTAGAATC+CGG + chr8_3:52890163-52890182 Msa1294960:intron 30.0%
TAATAGTAGTGAACATGCTA+GGG + chr8_3:52890370-52890389 Msa1294960:intron 30.0%
TGTGCATTATTTATCATTGC+AGG + chr8_3:52890409-52890428 Msa1294960:intron 30.0%
CATTATTTATCATTGCAGGA+AGG + chr8_3:52890413-52890432 Msa1294960:intron 30.0%
TTATTTATCATTGCAGGAAG+GGG + chr8_3:52890415-52890434 Msa1294960:intron 30.0%
ATGCTTAAACAATACCCTAA+GGG + chr8_3:52890735-52890754 Msa1294960:intron 30.0%
TACAGAACAAAGACAATGAT+GGG - chr8_3:52890791-52890810 None:intergenic 30.0%
AAGTCATCATTGGAAAAGTT+GGG - chr8_3:52890849-52890868 None:intergenic 30.0%
ATAGAAAGAGAAGTCATCAT+TGG - chr8_3:52890859-52890878 None:intergenic 30.0%
TTAGACAAAACTTCTGATGT+CGG + chr8_3:52891016-52891035 Msa1294960:intron 30.0%
!!! ATTTGGGTATTGAGTTTTGT+CGG - chr8_3:52891160-52891179 None:intergenic 30.0%
GAAAATGTTAGGGAGTAATT+TGG - chr8_3:52891177-52891196 None:intergenic 30.0%
! ACTCCCTAACATTTTCATAA+TGG + chr8_3:52891181-52891200 Msa1294960:intron 30.0%
AAATTGTGAGGAACCAAAAT+GGG + chr8_3:52891317-52891336 Msa1294960:intron 30.0%
CAAAAGTTTAAACTTCCATG+GGG + chr8_3:52891394-52891413 Msa1294960:intron 30.0%
ACATCCGATATTTGTAAAAC+CGG + chr8_3:52891427-52891446 Msa1294960:intron 30.0%
! CTATCCGGTTTTACAAATAT+CGG - chr8_3:52891434-52891453 None:intergenic 30.0%
!! ATTTTAACCAAGAGAAGAGA+CGG + chr8_3:52891482-52891501 Msa1294960:intron 30.0%
ATTCATTAAGTCTCATTGTC+TGG + chr8_3:52891509-52891528 Msa1294960:intron 30.0%
TCATTTAATCATGGGAGAAT+AGG + chr8_3:52891665-52891684 Msa1294960:intron 30.0%
AACATACTTCTGTTGATATG+TGG + chr8_3:52891768-52891787 Msa1294960:intron 30.0%
ATGTTGTTGTGTATTATGTG+AGG + chr8_3:52891887-52891906 Msa1294960:intron 30.0%
! TTTTCATTATATACAGCACC+AGG - chr8_3:52892067-52892086 None:intergenic 30.0%
ATGAAAAGCTTATGATTCAG+GGG + chr8_3:52892080-52892099 Msa1294960:intron 30.0%
AACATGAAACTGAAAAGCTT+AGG + chr8_3:52892122-52892141 Msa1294960:CDS 30.0%
!! AGTTTTATAGTGCAATCGTA+TGG + chr8_3:52892242-52892261 Msa1294960:intron 30.0%
ATTGGATTTGAACCTTGAAA+GGG + chr8_3:52892310-52892329 Msa1294960:CDS 30.0%
!!! AATTCTTGTTTTCACTGCTA+TGG + chr8_3:52892384-52892403 Msa1294960:intron 30.0%
! ATAAAAAAGACACTTTAGGG+GGG - chr8_3:52892561-52892580 None:intergenic 30.0%
CATAAAAAAGACACTTTAGG+GGG - chr8_3:52892562-52892581 None:intergenic 30.0%
CCATAAAAAAGACACTTTAG+GGG - chr8_3:52892563-52892582 None:intergenic 30.0%
CACTTATAGTCAAATAGGTT+TGG - chr8_3:52892720-52892739 None:intergenic 30.0%
! AAGCTTTGTATGTGATTCTT+TGG - chr8_3:52892910-52892929 None:intergenic 30.0%
! AGAAAATCGACTTCTACTAA+AGG - chr8_3:52892941-52892960 None:intergenic 30.0%
! AAGAAAAGATGCCCAATTTT+TGG - chr8_3:52892982-52893001 None:intergenic 30.0%
AAATTTGCGTCATGATATTC+AGG + chr8_3:52893007-52893026 Msa1294960:intron 30.0%
GTTAACATTATAAAACCAGG+TGG + chr8_3:52893169-52893188 Msa1294960:three_prime_UTR 30.0%
AAAGATCAAGAGTAGCTATT+TGG + chr8_3:52893194-52893213 Msa1294960:three_prime_UTR 30.0%
ACTGAAGTAGATAATAATCC+AGG - chr8_3:52893429-52893448 None:intergenic 30.0%
TAGTTATATTCGCGGAAAGA+GGG - chr8_3:52889266-52889285 None:intergenic 35.0%
ATAGTTATATTCGCGGAAAG+AGG - chr8_3:52889267-52889286 None:intergenic 35.0%
AGACATATGCGACAATTATC+TGG + chr8_3:52889376-52889395 Msa1294960:CDS 35.0%
GAAGCTGAAGATGAAAAGTA+TGG - chr8_3:52889475-52889494 None:intergenic 35.0%
TCTCAATTGGTCAAATCCAA+TGG + chr8_3:52889517-52889536 Msa1294960:CDS 35.0%
!!! GACGTATTGTTTTGAAATGC+GGG + chr8_3:52889652-52889671 Msa1294960:intron 35.0%
!!! TTTTGAAATGCGGGTTTTGT+AGG + chr8_3:52889661-52889680 Msa1294960:intron 35.0%
TTGTAGGTTAGGAGATTAGA+AGG + chr8_3:52889677-52889696 Msa1294960:intron 35.0%
TGTAGGTTAGGAGATTAGAA+GGG + chr8_3:52889678-52889697 Msa1294960:intron 35.0%
GAAAAATGACGAGTTTGATC+AGG + chr8_3:52889977-52889996 Msa1294960:intron 35.0%
TACGAGTTTAGGGACTAAAT+TGG + chr8_3:52890065-52890084 Msa1294960:intron 35.0%
CCCACAGAATCACATAAAAA+AGG - chr8_3:52890108-52890127 None:intergenic 35.0%
GTTTGTGTTACCAAATGTTG+TGG + chr8_3:52890141-52890160 Msa1294960:intron 35.0%
TTAAAGTCGACCACAACATT+TGG - chr8_3:52890154-52890173 None:intergenic 35.0%
ACAAAATAGCTCACATTAGC+CGG - chr8_3:52890185-52890204 None:intergenic 35.0%
TGATTTGAATTTGGACAGGT+TGG - chr8_3:52890242-52890261 None:intergenic 35.0%
! CTTCTGATTTGAATTTGGAC+AGG - chr8_3:52890246-52890265 None:intergenic 35.0%
! CTGCACTTCTGATTTGAATT+TGG - chr8_3:52890251-52890270 None:intergenic 35.0%
GTAATAGTAGTGAACATGCT+AGG + chr8_3:52890369-52890388 Msa1294960:intron 35.0%
CTAATGCCATGCCATAAATA+TGG + chr8_3:52890453-52890472 Msa1294960:intron 35.0%
TGAGCTAGATACACTAATTC+AGG + chr8_3:52890491-52890510 Msa1294960:intron 35.0%
TTCCTTACACAATACTGTTC+GGG - chr8_3:52890622-52890641 None:intergenic 35.0%
GTTCCTTACACAATACTGTT+CGG - chr8_3:52890623-52890642 None:intergenic 35.0%
GATGCTTAAACAATACCCTA+AGG + chr8_3:52890734-52890753 Msa1294960:intron 35.0%
GTACAGAACAAAGACAATGA+TGG - chr8_3:52890792-52890811 None:intergenic 35.0%
GAAGTCATCATTGGAAAAGT+TGG - chr8_3:52890850-52890869 None:intergenic 35.0%
! ATTTTGGGCACTTGTGAAAT+TGG + chr8_3:52890965-52890984 Msa1294960:intron 35.0%
AAATTGTGAGGGACCAAAAT+GGG - chr8_3:52891116-52891135 None:intergenic 35.0%
!!! TTTGGGTATTGAGTTTTGTC+GGG - chr8_3:52891159-52891178 None:intergenic 35.0%
GGGCCATTATGAAAATGTTA+GGG - chr8_3:52891187-52891206 None:intergenic 35.0%
TGGGCCATTATGAAAATGTT+AGG - chr8_3:52891188-52891207 None:intergenic 35.0%
! TAGTCCCTGATGTTTTCATA+CGG - chr8_3:52891254-52891273 None:intergenic 35.0%
GAAAACATCAGGGACTAATT+TGG + chr8_3:52891257-52891276 Msa1294960:intron 35.0%
GAAATTGTGAGGAACCAAAA+TGG + chr8_3:52891316-52891335 Msa1294960:intron 35.0%
CCTTTGCTTTCTATACTATC+CGG - chr8_3:52891449-52891468 None:intergenic 35.0%
! TTTTAACCAAGAGAAGAGAC+GGG + chr8_3:52891483-52891502 Msa1294960:intron 35.0%
TGAAGATCATCAGACCAAAT+GGG + chr8_3:52891546-52891565 Msa1294960:intron 35.0%
CAAGAATCCTATCATAGCAA+CGG - chr8_3:52891612-52891631 None:intergenic 35.0%
GTTGCTATGATAGGATTCTT+GGG + chr8_3:52891611-52891630 Msa1294960:intron 35.0%
AAATGAGATAAACCTTGAGG+AGG - chr8_3:52891651-52891670 None:intergenic 35.0%
AGGAGAGTAAATCTAGTAGT+TGG + chr8_3:52891831-52891850 Msa1294960:intron 35.0%
! GAGGGCATATGTCTTAAAAT+GGG + chr8_3:52891929-52891948 Msa1294960:intron 35.0%
!!! TATGCGTCCGTTTTTTTTCT+TGG + chr8_3:52891958-52891977 Msa1294960:intron 35.0%
CATGTTGCAACAGTGAAAAA+TGG - chr8_3:52892108-52892127 None:intergenic 35.0%
GTGAATTGAGGTATATTCAC+CGG + chr8_3:52892167-52892186 Msa1294960:intron 35.0%
AAATCAAATGAGCACAGCTA+TGG - chr8_3:52892216-52892235 None:intergenic 35.0%
! AATCGTATGGTTTGTGATAC+AGG + chr8_3:52892255-52892274 Msa1294960:intron 35.0%
TTTGTGATACAGGTATGAGA+TGG + chr8_3:52892265-52892284 Msa1294960:intron 35.0%
GATTGGATTTGAACCTTGAA+AGG + chr8_3:52892309-52892328 Msa1294960:CDS 35.0%
TTGGATTTGAACCTTGAAAG+GGG + chr8_3:52892311-52892330 Msa1294960:CDS 35.0%
ACTTACCCTATCAAGTTTGT+TGG - chr8_3:52892483-52892502 None:intergenic 35.0%
!!! CCCCTAAAGTGTCTTTTTTA+TGG + chr8_3:52892560-52892579 Msa1294960:intron 35.0%
!! GCTTCTGGTAGTGTATTTTT+GGG + chr8_3:52892589-52892608 Msa1294960:intron 35.0%
!! CTTCTGGTAGTGTATTTTTG+GGG + chr8_3:52892590-52892609 Msa1294960:intron 35.0%
!!! TTCTGGTAGTGTATTTTTGG+GGG + chr8_3:52892591-52892610 Msa1294960:intron 35.0%
GATCAAATGTAGCTTATGCT+TGG + chr8_3:52892739-52892758 Msa1294960:intron 35.0%
! TCATTCTTTAAGAGCACAAC+TGG + chr8_3:52893034-52893053 Msa1294960:CDS 35.0%
GAGGTCATAAAATACTGCAT+AGG + chr8_3:52893071-52893090 Msa1294960:CDS 35.0%
TGCAGAGTTAGGTTCTGTAA+GGG - chr8_3:52889222-52889241 None:intergenic 40.0%
ATGCAGAGTTAGGTTCTGTA+AGG - chr8_3:52889223-52889242 None:intergenic 40.0%
! TTTTCATCGTATCGTTGGGA+AGG + chr8_3:52889297-52889316 Msa1294960:five_prime_UTR 40.0%
TCGCATATGTCTACAAATCG+CGG - chr8_3:52889368-52889387 None:intergenic 40.0%
! ATTTGAAGCGAAGACGATGA+TGG - chr8_3:52889433-52889452 None:intergenic 40.0%
!! AAATGCGGGTTTTGTAGGTT+AGG + chr8_3:52889666-52889685 Msa1294960:intron 40.0%
!! TCTCAAGCTTTGGTGTCAAA+AGG + chr8_3:52889779-52889798 Msa1294960:intron 40.0%
GAGTTTAGGGACTAAATTGG+TGG + chr8_3:52890068-52890087 Msa1294960:intron 40.0%
!! GAGGAAGTGTTTGTTATGTG+TGG + chr8_3:52890306-52890325 Msa1294960:intron 40.0%
TGGCATGGCATTAGTAAAGT+AGG - chr8_3:52890447-52890466 None:intergenic 40.0%
CATCATTTCCCCCAAGTATT+AGG + chr8_3:52890568-52890587 Msa1294960:intron 40.0%
AATGCTAACAAGTGCCCTTA+GGG - chr8_3:52890752-52890771 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+AGG - chr8_3:52890753-52890772 None:intergenic 40.0%
GCAACAACAAAAGTTTGAGC+AGG - chr8_3:52891050-52891069 None:intergenic 40.0%
GAAATTGTGAGGGACCAAAA+TGG - chr8_3:52891117-52891136 None:intergenic 40.0%
!!! TTGGGTATTGAGTTTTGTCG+GGG - chr8_3:52891158-52891177 None:intergenic 40.0%
AATGAGTCAGGGACTGAATT+GGG - chr8_3:52891207-52891226 None:intergenic 40.0%
! AGTCCCTGATGTTTTCATAC+GGG - chr8_3:52891253-52891272 None:intergenic 40.0%
GATGTTAATAAGCTTCCCCA+TGG - chr8_3:52891412-52891431 None:intergenic 40.0%
CCGGATAGTATAGAAAGCAA+AGG + chr8_3:52891446-52891465 Msa1294960:intron 40.0%
! AATTTTCCCGTCTCTTCTCT+TGG - chr8_3:52891492-52891511 None:intergenic 40.0%
CTGAAGATCATCAGACCAAA+TGG + chr8_3:52891545-52891564 Msa1294960:intron 40.0%
GAAGATCATCAGACCAAATG+GGG + chr8_3:52891547-52891566 Msa1294960:intron 40.0%
CGTTGCTATGATAGGATTCT+TGG + chr8_3:52891610-52891629 Msa1294960:intron 40.0%
TTATGTGAGGAAATTGCTGC+CGG + chr8_3:52891900-52891919 Msa1294960:intron 40.0%
! GGAGGGCATATGTCTTAAAA+TGG + chr8_3:52891928-52891947 Msa1294960:intron 40.0%
!!! TGAGAATGGTTTTGTTTGCC+TGG + chr8_3:52892046-52892065 Msa1294960:intron 40.0%
AGAAGATGCGTAGTGAATTG+AGG + chr8_3:52892155-52892174 Msa1294960:CDS 40.0%
! TGGTCAAGATTTGCTCAAAC+CGG - chr8_3:52892189-52892208 None:intergenic 40.0%
TGGATTTGAACCTTGAAAGG+GGG + chr8_3:52892312-52892331 Msa1294960:CDS 40.0%
ACTTCACTTACAGGAGAACT+AGG + chr8_3:52892417-52892436 Msa1294960:intron 40.0%
CTTCACTTACAGGAGAACTA+GGG + chr8_3:52892418-52892437 Msa1294960:intron 40.0%
ACCTGACCAACAAACTTGAT+AGG + chr8_3:52892474-52892493 Msa1294960:CDS 40.0%
CCTGACCAACAAACTTGATA+GGG + chr8_3:52892475-52892494 Msa1294960:CDS 40.0%
!! TTTTTATGGAAGCACGCTTC+TGG + chr8_3:52892574-52892593 Msa1294960:intron 40.0%
!! CGCTTCTGGTAGTGTATTTT+TGG + chr8_3:52892588-52892607 Msa1294960:intron 40.0%
TTGCAGCTCATGCCAAAAAT+TGG + chr8_3:52892967-52892986 Msa1294960:intron 40.0%
TGCAGCTCATGCCAAAAATT+GGG + chr8_3:52892968-52892987 Msa1294960:intron 40.0%
ACTGGAAGCAGCTAAATATG+AGG + chr8_3:52893052-52893071 Msa1294960:CDS 40.0%
TTGTTTCAATCTCTGCCGTT+GGG + chr8_3:52893099-52893118 Msa1294960:CDS 40.0%
TCCGCATCTTGATGTAAACA+GGG + chr8_3:52893132-52893151 Msa1294960:exon 40.0%
ACCCTGTTTACATCAAGATG+CGG - chr8_3:52893136-52893155 None:intergenic 40.0%
! ACTCTTGATCTTTTTCCACC+TGG - chr8_3:52893187-52893206 None:intergenic 40.0%
TACATAACTAGTGGAGCTGA+AGG + chr8_3:52893259-52893278 Msa1294960:three_prime_UTR 40.0%
ATGGCGAATGAATACACGAA+AGG - chr8_3:52893349-52893368 None:intergenic 40.0%
GATAAACACACGCATCTTAG+AGG + chr8_3:52893403-52893422 Msa1294960:three_prime_UTR 40.0%
GAGGAACAAGTGTTTGCCAT+TGG - chr8_3:52889536-52889555 None:intergenic 45.0%
CTTGTTCCTCGTTGACACAT+TGG + chr8_3:52889546-52889565 Msa1294960:CDS 45.0%
GTTAGGAGATTAGAAGGGCA+AGG + chr8_3:52889683-52889702 Msa1294960:CDS 45.0%
! ATAGCCTCAGCTTGCTTTGA+AGG - chr8_3:52889713-52889732 None:intergenic 45.0%
TTTATCATTGCAGGAAGGGG+AGG + chr8_3:52890418-52890437 Msa1294960:intron 45.0%
TGCCCGAACAGTATTGTGTA+AGG + chr8_3:52890617-52890636 Msa1294960:intron 45.0%
AAGCAGTGAGCGGAATGAAA+TGG - chr8_3:52890891-52890910 None:intergenic 45.0%
AATGCAATCGAAGCAGTGAG+CGG - chr8_3:52890901-52890920 None:intergenic 45.0%
! GTTTTGTCGGGGACTGAATT+GGG - chr8_3:52891147-52891166 None:intergenic 45.0%
!! AGTTTTGTCGGGGACTGAAT+TGG - chr8_3:52891148-52891167 None:intergenic 45.0%
CAATGAGTCAGGGACTGAAT+TGG - chr8_3:52891208-52891227 None:intergenic 45.0%
TCCCTGACTCATTGTAACAG+AGG + chr8_3:52891214-52891233 Msa1294960:intron 45.0%
CCCTCTGTTACAATGAGTCA+GGG - chr8_3:52891218-52891237 None:intergenic 45.0%
CCCTGACTCATTGTAACAGA+GGG + chr8_3:52891215-52891234 Msa1294960:intron 45.0%
CCTGACTCATTGTAACAGAG+GGG + chr8_3:52891216-52891235 Msa1294960:intron 45.0%
TCCCCCGTATGAAAACATCA+GGG + chr8_3:52891247-52891266 Msa1294960:intron 45.0%
! TCCCTGATGTTTTCATACGG+GGG - chr8_3:52891251-52891270 None:intergenic 45.0%
! GTCCCTGATGTTTTCATACG+GGG - chr8_3:52891252-52891271 None:intergenic 45.0%
AAGGATATAATTGGGCCGCA+AGG + chr8_3:52891294-52891313 Msa1294960:intron 45.0%
GGTTCCTCACAATTTCCTTG+CGG - chr8_3:52891312-52891331 None:intergenic 45.0%
GAAGTCACAAACACCCCATT+TGG - chr8_3:52891563-52891582 None:intergenic 45.0%
TGTGTGTCCGTTGCTATGAT+AGG + chr8_3:52891602-52891621 Msa1294960:intron 45.0%
ATCGATTGTGATCCTCCTCA+AGG + chr8_3:52891636-52891655 Msa1294960:intron 45.0%
TATGTGAGGAAATTGCTGCC+GGG + chr8_3:52891901-52891920 Msa1294960:intron 45.0%
TCAAATGAGCACAGCTATGG+TGG - chr8_3:52892213-52892232 None:intergenic 45.0%
TCTTCACTTACCCCCTTTCA+AGG - chr8_3:52892325-52892344 None:intergenic 45.0%
!! CCCTATCAAGTTTGTTGGTC+AGG - chr8_3:52892478-52892497 None:intergenic 45.0%
!! TTTGGGGGCTTTGAGCATAT+AGG + chr8_3:52892606-52892625 Msa1294960:intron 45.0%
!! TTGGGGGCTTTGAGCATATA+GGG + chr8_3:52892607-52892626 Msa1294960:intron 45.0%
CTTGTTTCAATCTCTGCCGT+TGG + chr8_3:52893098-52893117 Msa1294960:CDS 45.0%
CTCCGCATCTTGATGTAAAC+AGG + chr8_3:52893131-52893150 Msa1294960:exon 45.0%
! CTTGATGTAAACAGGGTGTC+TGG + chr8_3:52893139-52893158 Msa1294960:exon 45.0%
AAGGCCCAACTTTGCCTAAT+GGG - chr8_3:52893294-52893313 None:intergenic 45.0%
AAAGGCCCAACTTTGCCTAA+TGG - chr8_3:52893295-52893314 None:intergenic 45.0%
GTATTCATTCGCCATGCTTG+TGG + chr8_3:52893354-52893373 Msa1294960:three_prime_UTR 45.0%
GTGCAAATATGCCACAAGCA+TGG - chr8_3:52893368-52893387 None:intergenic 45.0%
!! ATAAAAAAAATAACAAAAAA+GGG - chr8_3:52889595-52889614 None:intergenic 5.0%
!! AATAAAAAAAATAACAAAAA+AGG - chr8_3:52889596-52889615 None:intergenic 5.0%
!! TAAAGAAAAATATAAAATTA+TGG - chr8_3:52891984-52892003 None:intergenic 5.0%
CAAGAGCCAATGTGTCAACG+AGG - chr8_3:52889555-52889574 None:intergenic 50.0%
AGTGCCTTCAAAGCAAGCTG+AGG + chr8_3:52889706-52889725 Msa1294960:CDS 50.0%
! ATCAGAAGTGCAGAGCTCAC+AGG + chr8_3:52890258-52890277 Msa1294960:CDS 50.0%
GGGTCGCAAGGAAATTGTGA+GGG - chr8_3:52891127-52891146 None:intergenic 50.0%
TGGGTCGCAAGGAAATTGTG+AGG - chr8_3:52891128-52891147 None:intergenic 50.0%
CCCCTCTGTTACAATGAGTC+AGG - chr8_3:52891219-52891238 None:intergenic 50.0%
GTCCCCCGTATGAAAACATC+AGG + chr8_3:52891246-52891265 Msa1294960:intron 50.0%
ATGAGCACAGCTATGGTGGT+TGG - chr8_3:52892209-52892228 None:intergenic 50.0%
GAGATGGACAAAGTCACTGC+TGG + chr8_3:52892281-52892300 Msa1294960:CDS 50.0%
CACTTACAGGAGAACTAGGG+AGG + chr8_3:52892421-52892440 Msa1294960:intron 50.0%
! AAAAGACACTTTAGGGGGGC+AGG - chr8_3:52892557-52892576 None:intergenic 50.0%
!! TGGGGGCTTTGAGCATATAG+GGG + chr8_3:52892608-52892627 Msa1294960:intron 50.0%
GAAGGAACTAGCTCCCCATT+AGG + chr8_3:52893277-52893296 Msa1294960:three_prime_UTR 50.0%
AGCTCCCCATTAGGCAAAGT+TGG + chr8_3:52893286-52893305 Msa1294960:three_prime_UTR 50.0%
GCTCCCCATTAGGCAAAGTT+GGG + chr8_3:52893287-52893306 Msa1294960:three_prime_UTR 50.0%
AGGCCCAACTTTGCCTAATG+GGG - chr8_3:52893293-52893312 None:intergenic 50.0%
TGGGCCGCAAGGAAATTGTG+AGG + chr8_3:52891305-52891324 Msa1294960:intron 55.0%
AGGAAATTGCTGCCGGGACT+GGG + chr8_3:52891907-52891926 Msa1294960:intron 55.0%
AGTCACTGCTGGACAGCGAT+TGG + chr8_3:52892292-52892311 Msa1294960:CDS 55.0%
!! GGGGGCTTTGAGCATATAGG+GGG + chr8_3:52892609-52892628 Msa1294960:intron 55.0%
ACACACGCATCTTAGAGGCC+TGG + chr8_3:52893408-52893427 Msa1294960:three_prime_UTR 55.0%
GGGGACTGAATTGGGTCGCA+AGG - chr8_3:52891139-52891158 None:intergenic 60.0%
GAGGAAATTGCTGCCGGGAC+TGG + chr8_3:52891906-52891925 Msa1294960:intron 60.0%
AAATTGCTGCCGGGACTGGG+AGG + chr8_3:52891910-52891929 Msa1294960:intron 60.0%
AATTGCTGCCGGGACTGGGA+GGG + chr8_3:52891911-52891930 Msa1294960:intron 60.0%
GACATATGCCCTCCCAGTCC+CGG - chr8_3:52891922-52891941 None:intergenic 60.0%
GCGGAGAACAGCAAGCCCAA+CGG - chr8_3:52893117-52893136 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 52889189 52893512 52889189 ID=Msa1294960;Name=Msa1294960
chr8_3 mRNA 52889189 52893512 52889189 ID=Msa1294960-mRNA-1;Parent=Msa1294960;Name=Msa1294960-mRNA-1;_AED=0.17;_eAED=0.17;_QI=172|0.83|0.85|1|1|1|7|364|233
chr8_3 exon 52889189 52889573 52889189 ID=Msa1294960-mRNA-1:exon:15073;Parent=Msa1294960-mRNA-1
chr8_3 exon 52889683 52889790 52889683 ID=Msa1294960-mRNA-1:exon:15074;Parent=Msa1294960-mRNA-1
chr8_3 exon 52890220 52890279 52890220 ID=Msa1294960-mRNA-1:exon:15075;Parent=Msa1294960-mRNA-1
chr8_3 exon 52892100 52892176 52892100 ID=Msa1294960-mRNA-1:exon:15076;Parent=Msa1294960-mRNA-1
chr8_3 exon 52892277 52892333 52892277 ID=Msa1294960-mRNA-1:exon:15077;Parent=Msa1294960-mRNA-1
chr8_3 exon 52892430 52892496 52892430 ID=Msa1294960-mRNA-1:exon:15078;Parent=Msa1294960-mRNA-1
chr8_3 exon 52893029 52893512 52893029 ID=Msa1294960-mRNA-1:exon:15079;Parent=Msa1294960-mRNA-1
chr8_3 five_prime_UTR 52889189 52889360 52889189 ID=Msa1294960-mRNA-1:five_prime_utr;Parent=Msa1294960-mRNA-1
chr8_3 CDS 52889361 52889573 52889361 ID=Msa1294960-mRNA-1:cds;Parent=Msa1294960-mRNA-1
chr8_3 CDS 52889683 52889790 52889683 ID=Msa1294960-mRNA-1:cds;Parent=Msa1294960-mRNA-1
chr8_3 CDS 52890220 52890279 52890220 ID=Msa1294960-mRNA-1:cds;Parent=Msa1294960-mRNA-1
chr8_3 CDS 52892100 52892176 52892100 ID=Msa1294960-mRNA-1:cds;Parent=Msa1294960-mRNA-1
chr8_3 CDS 52892277 52892333 52892277 ID=Msa1294960-mRNA-1:cds;Parent=Msa1294960-mRNA-1
chr8_3 CDS 52892430 52892496 52892430 ID=Msa1294960-mRNA-1:cds;Parent=Msa1294960-mRNA-1
chr8_3 CDS 52893029 52893148 52893029 ID=Msa1294960-mRNA-1:cds;Parent=Msa1294960-mRNA-1
chr8_3 three_prime_UTR 52893149 52893512 52893149 ID=Msa1294960-mRNA-1:three_prime_utr;Parent=Msa1294960-mRNA-1
Gene Sequence

>Msa1294960

ATGGCCGCGATTTGTAGACATATGCGACAATTATCTGGATTAAGAGAATTAGGGATTTCGAGAATAGCACCATCATCGTCTTCGCTTCAAATTCAAACTTCAATTTTCGATCCATACTTTTCATCTTCAGCTTCAACAACAAGATCTTTTTCACAATCTCAATTGGTCAAATCCAATGGCAAACACTTGTTCCTCGTTGACACATTGGCTCTTGTTAGGAGATTAGAAGGGCAAGGAGTGCCTTCAAAGCAAGCTGAGGCTATAACTGCTGCTATAACTGAAGTCTTGAATGATAGTCTTGAAAATGTTTCTCAAGCTTTGACTGAAATGATTCAAGAGTCCAACCTGTCCAAATTCAAATCAGAAGTGCAGAGCTCACAGGGGCACCATTTTTCACTGTTGCAACATGAAACTGAAAAGCTTAGGAATGATATAGAGAAGATGCGTAGTGAATTGAGGTATGAGATGGACAAAGTCACTGCTGGACAGCGATTGGATTTGAACCTTGAAAGGGGGAGAACTAGGGAGGAACTGTCTAATCAGAGTGCTGAAACTAACAACCTGACCAACAAACTTGATAGGGAGATTCATTCTTTAAGAGCACAACTGGAAGCAGCTAAATATGAGGTCATAAAATACTGCATAGGAACACTTGTTTCAATCTCTGCCGTTGGGCTTGCTGTTCTCCGCATCTTGATGTAA

Protein sequence

>Msa1294960

MAAICRHMRQLSGLRELGISRIAPSSSSLQIQTSIFDPYFSSSASTTRSFSQSQLVKSNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITEVLNDSLENVSQALTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRYEMDKVTAGQRLDLNLERGRTREELSNQSAETNNLTNKLDREIHSLRAQLEAAKYEVIKYCIGTLVSISAVGLAVLRILM*