Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1395600 | XP_003624125.2 | 78.014 | 564 | 15 | 5 | 1 | 462 | 1 | 557 | 0.0 | 834 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1395600 | sp|Q0WUC5|ALB33_ARATH | 38.605 | 430 | 201 | 9 | 70 | 451 | 139 | 553 | 1.43e-89 | 286 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1395600 | G7KQL5 | 78.014 | 564 | 15 | 5 | 1 | 462 | 1 | 557 | 0.0 | 834 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017320 | Msa1395600 | -0.807945 | 3.944379e-50 | -8.615850e-47 |
Msa0026910 | Msa1395600 | -0.804267 | 2.345354e-49 | -8.615850e-47 |
Msa0029260 | Msa1395600 | -0.802473 | 5.517508e-49 | -8.615850e-47 |
Msa0030300 | Msa1395600 | -0.826932 | 2.068136e-54 | -8.615850e-47 |
Msa0033880 | Msa1395600 | -0.810319 | 1.222577e-50 | -8.615850e-47 |
Msa0052860 | Msa1395600 | -0.801264 | 9.773438e-49 | -8.615850e-47 |
Msa0081650 | Msa1395600 | -0.812622 | 3.864922e-51 | -8.615850e-47 |
Msa0090550 | Msa1395600 | -0.809337 | 1.988869e-50 | -8.615850e-47 |
Msa0103790 | Msa1395600 | -0.804129 | 2.504860e-49 | -8.615850e-47 |
Msa0104800 | Msa1395600 | -0.820033 | 8.492132e-53 | -8.615850e-47 |
Msa1348470 | Msa1395600 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
Msa1364210 | Msa1395600 | -0.836378 | 9.694397e-57 | -8.615850e-47 |
Msa1371240 | Msa1395600 | -0.820524 | 6.555665e-53 | -8.615850e-47 |
Msa1376130 | Msa1395600 | -0.802850 | 4.613694e-49 | -8.615850e-47 |
Msa1377570 | Msa1395600 | -0.803677 | 3.109837e-49 | -8.615850e-47 |
Msa1382790 | Msa1395600 | -0.808799 | 2.592846e-50 | -8.615850e-47 |
Msa1395600 | Msa1407190 | -0.827328 | 1.662307e-54 | -8.615850e-47 |
Msa1395600 | Msa1416260 | -0.805641 | 1.210433e-49 | -8.615850e-47 |
Msa1395600 | Msa1416370 | -0.800839 | 1.193695e-48 | -8.615850e-47 |
Msa1395600 | Msa1428780 | -0.818984 | 1.473853e-52 | -8.615850e-47 |
Msa1395600 | Msa1432130 | -0.814063 | 1.864739e-51 | -8.615850e-47 |
Msa1395600 | Msa1442790 | -0.800248 | 1.575760e-48 | -8.615850e-47 |
Msa1395600 | Msa1463600 | -0.802248 | 6.139249e-49 | -8.615850e-47 |
Msa1395600 | Msa1465610 | 0.809838 | 1.552127e-50 | -8.615850e-47 |
Msa0618950 | Msa1395600 | -0.827430 | 1.570964e-54 | -8.615850e-47 |
Msa0618970 | Msa1395600 | -0.819915 | 9.036351e-53 | -8.615850e-47 |
Msa0620330 | Msa1395600 | -0.811003 | 8.698197e-51 | -8.615850e-47 |
Msa0647930 | Msa1395600 | -0.802381 | 5.763500e-49 | -8.615850e-47 |
Msa0647950 | Msa1395600 | -0.802686 | 4.987117e-49 | -8.615850e-47 |
Msa0662630 | Msa1395600 | -0.835116 | 2.023971e-56 | -8.615850e-47 |
Msa0668460 | Msa1395600 | 0.804482 | 2.115115e-49 | -8.615850e-47 |
Msa0686080 | Msa1395600 | -0.808542 | 2.942191e-50 | -8.615850e-47 |
Msa0697720 | Msa1395600 | -0.814453 | 1.528878e-51 | -8.615850e-47 |
Msa0705190 | Msa1395600 | -0.805649 | 1.205286e-49 | -8.615850e-47 |
Msa0705390 | Msa1395600 | -0.816952 | 4.241664e-52 | -8.615850e-47 |
Msa0705990 | Msa1395600 | -0.817963 | 2.511125e-52 | -8.615850e-47 |
Msa0716420 | Msa1395600 | 0.804308 | 2.299073e-49 | -8.615850e-47 |
Msa0726080 | Msa1395600 | -0.829705 | 4.432694e-55 | -8.615850e-47 |
Msa0753990 | Msa1395600 | 0.808847 | 2.532457e-50 | -8.615850e-47 |
Msa0760350 | Msa1395600 | -0.803716 | 3.052749e-49 | -8.615850e-47 |
Msa0760990 | Msa1395600 | 0.812637 | 3.835613e-51 | -8.615850e-47 |
Msa0800370 | Msa1395600 | -0.806134 | 9.531552e-50 | -8.615850e-47 |
Msa0801730 | Msa1395600 | -0.807705 | 4.436377e-50 | -8.615850e-47 |
Msa0823500 | Msa1395600 | -0.813450 | 2.543433e-51 | -8.615850e-47 |
Msa0827280 | Msa1395600 | -0.823710 | 1.196269e-53 | -8.615850e-47 |
Msa0127850 | Msa1395600 | -0.830519 | 2.806295e-55 | -8.615850e-47 |
Msa0142500 | Msa1395600 | -0.804667 | 1.934875e-49 | -8.615850e-47 |
Msa0146080 | Msa1395600 | -0.810322 | 1.221048e-50 | -8.615850e-47 |
Msa0150260 | Msa1395600 | -0.802406 | 5.695047e-49 | -8.615850e-47 |
Msa0167980 | Msa1395600 | -0.805550 | 1.264648e-49 | -8.615850e-47 |
Msa0169300 | Msa1395600 | -0.802241 | 6.158449e-49 | -8.615850e-47 |
Msa0175540 | Msa1395600 | -0.815272 | 1.006504e-51 | -8.615850e-47 |
Msa0180510 | Msa1395600 | 0.800955 | 1.130226e-48 | -8.615850e-47 |
Msa0187490 | Msa1395600 | -0.809666 | 1.690553e-50 | -8.615850e-47 |
Msa0189520 | Msa1395600 | -0.807060 | 6.078899e-50 | -8.615850e-47 |
Msa0209080 | Msa1395600 | -0.825390 | 4.811358e-54 | -8.615850e-47 |
Msa0233370 | Msa1395600 | -0.809210 | 2.117780e-50 | -8.615850e-47 |
Msa1242580 | Msa1395600 | 0.833116 | 6.416276e-56 | -8.615850e-47 |
Msa1250110 | Msa1395600 | -0.810708 | 1.007923e-50 | -8.615850e-47 |
Msa1250730 | Msa1395600 | -0.808120 | 3.619548e-50 | -8.615850e-47 |
Msa1263290 | Msa1395600 | 0.817830 | 2.690846e-52 | -8.615850e-47 |
Msa1270660 | Msa1395600 | -0.825815 | 3.816565e-54 | -8.615850e-47 |
Msa1270730 | Msa1395600 | -0.812412 | 4.295777e-51 | -8.615850e-47 |
Msa1293480 | Msa1395600 | 0.800866 | 1.178774e-48 | -8.615850e-47 |
Msa1299820 | Msa1395600 | 0.811128 | 8.173513e-51 | -8.615850e-47 |
Msa1307180 | Msa1395600 | -0.821949 | 3.075279e-53 | -8.615850e-47 |
Msa1312500 | Msa1395600 | -0.802448 | 5.582618e-49 | -8.615850e-47 |
Msa1316360 | Msa1395600 | -0.823204 | 1.571116e-53 | -8.615850e-47 |
Msa1330270 | Msa1395600 | -0.800996 | 1.108996e-48 | -8.615850e-47 |
Msa1331320 | Msa1395600 | -0.800136 | 1.660705e-48 | -8.615850e-47 |
Msa1336560 | Msa1395600 | -0.810372 | 1.190864e-50 | -8.615850e-47 |
Msa1339190 | Msa1395600 | -0.815295 | 9.946784e-52 | -8.615850e-47 |
Msa0378970 | Msa1395600 | -0.802857 | 4.597143e-49 | -8.615850e-47 |
Msa0387050 | Msa1395600 | -0.805769 | 1.137757e-49 | -8.615850e-47 |
Msa0410300 | Msa1395600 | -0.814120 | 1.811473e-51 | -8.615850e-47 |
Msa0422180 | Msa1395600 | -0.803284 | 3.751393e-49 | -8.615850e-47 |
Msa0461590 | Msa1395600 | -0.804424 | 2.174965e-49 | -8.615850e-47 |
Msa0468320 | Msa1395600 | -0.818422 | 1.977010e-52 | -8.615850e-47 |
Msa0482180 | Msa1395600 | -0.809328 | 1.997548e-50 | -8.615850e-47 |
Msa0990580 | Msa1395600 | -0.801809 | 7.557050e-49 | -8.615850e-47 |
Msa0994370 | Msa1395600 | -0.824291 | 8.740993e-54 | -8.615850e-47 |
Msa1001390 | Msa1395600 | -0.820918 | 5.321244e-53 | -8.615850e-47 |
Msa1010460 | Msa1395600 | -0.800096 | 1.691343e-48 | -8.615850e-47 |
Msa1028760 | Msa1395600 | 0.910403 | 1.946960e-82 | -8.615850e-47 |
Msa1042660 | Msa1395600 | -0.818105 | 2.331134e-52 | -8.615850e-47 |
Msa1063420 | Msa1395600 | -0.806573 | 7.702453e-50 | -8.615850e-47 |
Msa1067890 | Msa1395600 | 0.956124 | 6.162569e-114 | -8.615850e-47 |
Msa1080330 | Msa1395600 | 0.818702 | 1.707324e-52 | -8.615850e-47 |
Msa1088250 | Msa1395600 | 0.805833 | 1.102736e-49 | -8.615850e-47 |
Msa1089320 | Msa1395600 | -0.832507 | 9.086166e-56 | -8.615850e-47 |
Msa1100530 | Msa1395600 | 0.810799 | 9.629445e-51 | -8.615850e-47 |
Msa0240300 | Msa1395600 | -0.808374 | 3.196524e-50 | -8.615850e-47 |
Msa0264530 | Msa1395600 | -0.824469 | 7.936029e-54 | -8.615850e-47 |
Msa0281480 | Msa1395600 | -0.802079 | 6.650334e-49 | -8.615850e-47 |
Msa0283420 | Msa1395600 | -0.808801 | 2.591239e-50 | -8.615850e-47 |
Msa0296980 | Msa1395600 | 0.803506 | 3.374942e-49 | -8.615850e-47 |
Msa0304840 | Msa1395600 | -0.807086 | 6.000343e-50 | -8.615850e-47 |
Msa0311720 | Msa1395600 | -0.819228 | 1.296930e-52 | -8.615850e-47 |
Msa0320610 | Msa1395600 | -0.807733 | 4.376761e-50 | -8.615850e-47 |
Msa0341230 | Msa1395600 | -0.801343 | 9.415038e-49 | -8.615850e-47 |
Msa1109350 | Msa1395600 | -0.802069 | 6.682934e-49 | -8.615850e-47 |
Msa1113230 | Msa1395600 | 0.887568 | 1.272542e-72 | -8.615850e-47 |
Msa1129060 | Msa1395600 | 0.803517 | 3.356728e-49 | -8.615850e-47 |
Msa1130670 | Msa1395600 | 0.825536 | 4.442945e-54 | -8.615850e-47 |
Msa1143020 | Msa1395600 | -0.805018 | 1.634173e-49 | -8.615850e-47 |
Msa1156150 | Msa1395600 | 0.817945 | 2.533500e-52 | -8.615850e-47 |
Msa1163870 | Msa1395600 | -0.801981 | 6.967711e-49 | -8.615850e-47 |
Msa1165490 | Msa1395600 | -0.810082 | 1.375755e-50 | -8.615850e-47 |
Msa1169850 | Msa1395600 | 0.805020 | 1.633182e-49 | -8.615850e-47 |
Msa1178060 | Msa1395600 | -0.812228 | 4.712653e-51 | -8.615850e-47 |
Msa1188600 | Msa1395600 | 0.823468 | 1.362748e-53 | -8.615850e-47 |
Msa1206650 | Msa1395600 | -0.823196 | 1.577510e-53 | -8.615850e-47 |
Msa1207310 | Msa1395600 | -0.809831 | 1.557948e-50 | -8.615850e-47 |
Msa1207350 | Msa1395600 | -0.808900 | 2.467209e-50 | -8.615850e-47 |
Msa1211140 | Msa1395600 | 0.803066 | 4.161779e-49 | -8.615850e-47 |
Msa1215920 | Msa1395600 | -0.801236 | 9.902305e-49 | -8.615850e-47 |
Msa0485490 | Msa1395600 | -0.806641 | 7.454670e-50 | -8.615850e-47 |
Msa0517090 | Msa1395600 | -0.823952 | 1.049766e-53 | -8.615850e-47 |
Msa0518170 | Msa1395600 | -0.805607 | 1.230489e-49 | -8.615850e-47 |
Msa0518440 | Msa1395600 | -0.825168 | 5.428725e-54 | -8.615850e-47 |
Msa0532980 | Msa1395600 | -0.812026 | 5.214496e-51 | -8.615850e-47 |
Msa0586070 | Msa1395600 | -0.800763 | 1.237412e-48 | -8.615850e-47 |
Msa0846230 | Msa1395600 | -0.836594 | 8.538386e-57 | -8.615850e-47 |
Msa0862500 | Msa1395600 | -0.817249 | 3.636915e-52 | -8.615850e-47 |
Msa0866400 | Msa1395600 | -0.803822 | 2.901622e-49 | -8.615850e-47 |
Msa0918390 | Msa1395600 | -0.806598 | 7.609736e-50 | -8.615850e-47 |
Msa0924150 | Msa1395600 | 0.803908 | 2.785321e-49 | -8.615850e-47 |
Msa0957870 | Msa1395600 | -0.811508 | 6.760330e-51 | -8.615850e-47 |
Msa0963090 | Msa1395600 | 0.835341 | 1.775302e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1395600 | MtrunA17_Chr7g0249051 | 78.014 | 564 | 15 | 5 | 1 | 462 | 1 | 557 | 0.0 | 834 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1395600 | AT3G44370.2 | 38.605 | 430 | 201 | 9 | 70 | 451 | 13 | 427 | 1.03e-91 | 285 |
Msa1395600 | AT3G44370.1 | 38.605 | 430 | 201 | 9 | 70 | 451 | 139 | 553 | 1.46e-90 | 286 |
Msa1395600 | AT1G65080.1 | 38.341 | 446 | 200 | 7 | 70 | 461 | 99 | 523 | 9.19e-81 | 259 |
Find 116 sgRNAs with CRISPR-Local
Find 654 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTGCAAAGTTGGGGTTAC+TGG | 0.210318 | tig0021957:-19731 | Msa1395600:CDS |
TATTGCAGGGTGGTGCTTTA+TGG | 0.216934 | tig0021957:-22692 | Msa1395600:intron |
TACAGCTCTTTACATGATTC+TGG | 0.217023 | tig0021957:-17702 | Msa1395600:intron |
TTCAATCATAGGTTTCTTAA+AGG | 0.218621 | tig0021957:+21885 | None:intergenic |
TTTCATTAGCTTTCACTTGC+TGG | 0.236727 | tig0021957:-18840 | Msa1395600:intron |
TTCTAAAACACCGCCTTTAC+TGG | 0.237797 | tig0021957:-19668 | Msa1395600:CDS |
ACCAAAGCTCGCAAGTATTC+AGG | 0.244458 | tig0021957:+19189 | None:intergenic |
GAGAAAATTCTGTTAAATTC+TGG | 0.264895 | tig0021957:+22667 | None:intergenic |
ATCAGAGGTCTCTCCTACTT+TGG | 0.269333 | tig0021957:+17568 | None:intergenic |
CTTTGAAAGAGTTGCAAATA+TGG | 0.275220 | tig0021957:-17872 | Msa1395600:CDS |
CATAAAATACACAATAAATA+TGG | 0.299220 | tig0021957:+17525 | None:intergenic |
ACTTGTTCTTCTTTGTCCTT+TGG | 0.304662 | tig0021957:-25706 | Msa1395600:CDS |
TCTTCACTATGTTATTGTTC+AGG | 0.315846 | tig0021957:-22604 | Msa1395600:intron |
TCTGTTACCGTTTATTGTTC+AGG | 0.318587 | tig0021957:-24893 | Msa1395600:intron |
TCCTGTGTTTCTTCAATCAT+AGG | 0.321666 | tig0021957:+21874 | None:intergenic |
CGTTTGCTAGCGGGATCTTC+AGG | 0.330108 | tig0021957:+17844 | None:intergenic |
CCGGCTGCCCTTGCAAAGTT+GGG | 0.353729 | tig0021957:-19739 | Msa1395600:CDS |
GCACATGATACTCACATTTA+GGG | 0.357382 | tig0021957:+25643 | None:intergenic |
TTATCGCTACTATTTAGAAA+TGG | 0.359283 | tig0021957:+19410 | None:intergenic |
GAGAGTGAGGTGTGAAAGGA+TGG | 0.365807 | tig0021957:+26664 | None:intergenic |
CCCTGAATACTTGCGAGCTT+TGG | 0.367101 | tig0021957:-19190 | Msa1395600:CDS |
ATGGTTTGCTGCTGCTTGCC+AGG | 0.374798 | tig0021957:-17810 | Msa1395600:intron |
AACTATAATTTCGTCTACTT+TGG | 0.379950 | tig0021957:-25736 | Msa1395600:CDS |
GAGAAAGGCGGTGGGAATGG+AGG | 0.385786 | tig0021957:+24994 | None:intergenic |
GTCAGTATCCGGTTCGTTGT+TGG | 0.389209 | tig0021957:+26587 | None:intergenic |
GGTGTGAAAGGATGGGGAAA+TGG | 0.401260 | tig0021957:+26672 | None:intergenic |
CCATTCCCACCGCCTTTCTC+AGG | 0.403627 | tig0021957:-24991 | Msa1395600:CDS |
CTCTGGATTCACCTGAGAAA+TGG | 0.408648 | tig0021957:-19585 | Msa1395600:CDS |
TATCGCTACTATTTAGAAAT+GGG | 0.409486 | tig0021957:+19411 | None:intergenic |
GAAAAGCCAATGAAAGCTAT+AGG | 0.414505 | tig0021957:+21565 | None:intergenic |
TTTGATTCTTTCATCCCAAT+GGG | 0.420061 | tig0021957:-18787 | Msa1395600:CDS |
TCAGAGGTCTCTCCTACTTT+GGG | 0.421098 | tig0021957:+17569 | None:intergenic |
TCTAAAACACCGCCTTTACT+GGG | 0.421619 | tig0021957:-19667 | Msa1395600:CDS |
TCAAACTCTTCTGGATCAGT+TGG | 0.423716 | tig0021957:+18813 | None:intergenic |
TCCGGCTGCCCTTGCAAAGT+TGG | 0.426350 | tig0021957:-19740 | Msa1395600:CDS |
TTCAGGAGAAATAGTTTCCT+TGG | 0.432614 | tig0021957:+19615 | None:intergenic |
CAAAATTGTGTAAATATTGA+AGG | 0.433698 | tig0021957:-17391 | Msa1395600:three_prime_UTR |
GAAAGGCGGTGGGAATGGAG+GGG | 0.435640 | tig0021957:+24996 | None:intergenic |
ACATTGCCTATAGCTTTCAT+TGG | 0.436523 | tig0021957:-21571 | Msa1395600:CDS |
GGATGGGGAAATGGAGAAGG+GGG | 0.437314 | tig0021957:+26681 | None:intergenic |
GCACTTTGCTCTTAGAAATC+CGG | 0.441029 | tig0021957:-19758 | Msa1395600:CDS |
ACAGAGGACATGTTCTCTAT+AGG | 0.442064 | tig0021957:+19553 | None:intergenic |
AAAGGCGGTGGGAATGGAGG+GGG | 0.442947 | tig0021957:+24997 | None:intergenic |
CACACACGTGCTTTCTCCAC+TGG | 0.444127 | tig0021957:-26615 | Msa1395600:CDS |
GTAGGAGAGTGAGGTGTGAA+AGG | 0.444282 | tig0021957:+26660 | None:intergenic |
TTCTCCTGAAAAGAACCCTC+TGG | 0.446877 | tig0021957:-19602 | Msa1395600:CDS |
TTTACATGATTCTGGACAAA+AGG | 0.448616 | tig0021957:-17694 | Msa1395600:CDS |
TTCTGCATGGCAGGGAAAGA+AGG | 0.449768 | tig0021957:-17911 | Msa1395600:intron |
TGTGTCACCTGAACAATAAA+CGG | 0.452001 | tig0021957:+24886 | None:intergenic |
CCCAACTTTGCAAGGGCAGC+CGG | 0.456125 | tig0021957:+19739 | None:intergenic |
AACAGAGGCCACGCGTATGA+AGG | 0.456666 | tig0021957:+24910 | None:intergenic |
AGAAAGGCGGTGGGAATGGA+GGG | 0.460344 | tig0021957:+24995 | None:intergenic |
AAAGGCAATACCAGCCCATT+GGG | 0.461843 | tig0021957:+18773 | None:intergenic |
AGACCTAACGAGTCAGTATC+CGG | 0.464023 | tig0021957:+26576 | None:intergenic |
TTTAGAAGCATCAGTTTCCT+TGG | 0.464612 | tig0021957:+19684 | None:intergenic |
AAGGTCGTGAATGGCGGAGA+AGG | 0.465191 | tig0021957:+26742 | None:intergenic |
CTCTTTCCTGAGAAAGGCGG+TGG | 0.471632 | tig0021957:+24985 | None:intergenic |
AAATAATAGCGTTTGCTAGC+GGG | 0.477479 | tig0021957:+17835 | None:intergenic |
CCAAAGCTCGCAAGTATTCA+GGG | 0.479493 | tig0021957:+19190 | None:intergenic |
GAGTGAGGTGTGAAAGGATG+GGG | 0.479912 | tig0021957:+26666 | None:intergenic |
TGGCTCTTCCAACAACGAAC+CGG | 0.482250 | tig0021957:-26595 | Msa1395600:CDS |
CCTGAGAAAGGCGGTGGGAA+TGG | 0.482544 | tig0021957:+24991 | None:intergenic |
GCAGTACTACAAGCGATACT+TGG | 0.487468 | tig0021957:-21602 | Msa1395600:intron |
AAAGCAGAGGTAGGAGAGTG+AGG | 0.497731 | tig0021957:+26651 | None:intergenic |
AGGATGGGGAAATGGAGAAG+GGG | 0.499317 | tig0021957:+26680 | None:intergenic |
AAAGGATGGGGAAATGGAGA+AGG | 0.501975 | tig0021957:+26678 | None:intergenic |
TGAAGACCAGCCATCAGAAA+AGG | 0.502911 | tig0021957:+22621 | None:intergenic |
ATTCTTTCATCCCAATGGGC+TGG | 0.503593 | tig0021957:-18783 | Msa1395600:CDS |
TGGTATTGCCTTTGAACGAC+AGG | 0.508364 | tig0021957:-18763 | Msa1395600:intron |
ATATAACTCTTTCCTGAGAA+AGG | 0.513710 | tig0021957:+24979 | None:intergenic |
CCAGTAACCCCAACTTTGCA+AGG | 0.514235 | tig0021957:+19731 | None:intergenic |
AAGGATGGGGAAATGGAGAA+GGG | 0.515103 | tig0021957:+26679 | None:intergenic |
ATACAGATTAGCACTTGATA+AGG | 0.516704 | tig0021957:-19214 | Msa1395600:intron |
TTGTGTAAATATTGAAGGGA+TGG | 0.519120 | tig0021957:-17386 | Msa1395600:three_prime_UTR |
CAAAGGCAATACCAGCCCAT+TGG | 0.522360 | tig0021957:+18772 | None:intergenic |
GAAGAGAAGAGAAAAGCAGT+TGG | 0.524530 | tig0021957:-24937 | Msa1395600:CDS |
GAGAAGTTTGGATACGTGAC+AGG | 0.525922 | tig0021957:+26706 | None:intergenic |
CGTGGTTTCCAGAAGAGACA+TGG | 0.543024 | tig0021957:+17326 | None:intergenic |
CAAACTCTTCTGGATCAGTT+GGG | 0.547306 | tig0021957:+18814 | None:intergenic |
AAGGGAGCGGAGCGCCGCCG+TGG | 0.547423 | tig0021957:+26761 | None:intergenic |
TCGTCAAATAGCAGCTTCCA+AGG | 0.548353 | tig0021957:-19701 | Msa1395600:CDS |
TCACTTCACCTGTCGTTCAA+AGG | 0.549805 | tig0021957:+18755 | None:intergenic |
AGAGTGAGGTGTGAAAGGAT+GGG | 0.552625 | tig0021957:+26665 | None:intergenic |
GAAGTGAAGAAGGTCGTGAA+TGG | 0.559596 | tig0021957:+26733 | None:intergenic |
GTGAATGGCGGAGAAGGGAG+CGG | 0.567846 | tig0021957:+26748 | None:intergenic |
CGGCTGCCCTTGCAAAGTTG+GGG | 0.568863 | tig0021957:-19738 | Msa1395600:CDS |
AAAATTGTGTAAATATTGAA+GGG | 0.570572 | tig0021957:-17390 | Msa1395600:three_prime_UTR |
AGGTCGTGAATGGCGGAGAA+GGG | 0.572019 | tig0021957:+26743 | None:intergenic |
ACAGAGGCCACGCGTATGAA+GGG | 0.572665 | tig0021957:+24911 | None:intergenic |
GACAGGTAGAGAAGTGAAGA+AGG | 0.573250 | tig0021957:+26723 | None:intergenic |
AGAATAACTTACTTTAGCAA+AGG | 0.577211 | tig0021957:+19374 | None:intergenic |
CTAGTGATCTTGCCCAAAGT+AGG | 0.578319 | tig0021957:-17581 | Msa1395600:CDS |
TTCGTTGTTGGAAGAGCCAG+TGG | 0.578885 | tig0021957:+26599 | None:intergenic |
GCGTCGAGAAAAGCAGAGGT+AGG | 0.597258 | tig0021957:+26642 | None:intergenic |
TCCGCCGTCAATGGCAACCA+CGG | 0.597430 | tig0021957:-26778 | None:intergenic |
ACCTATGATTGAAGAAACAC+AGG | 0.599445 | tig0021957:-21875 | Msa1395600:CDS |
TTGGATGCCCTTCATACGCG+TGG | 0.607722 | tig0021957:-24918 | Msa1395600:CDS |
TGAAAGAGTTGCAAATATGG+AGG | 0.608553 | tig0021957:-17869 | Msa1395600:CDS |
CTAAAACACCGCCTTTACTG+GGG | 0.609566 | tig0021957:-19666 | Msa1395600:CDS |
TAAAACACCGCCTTTACTGG+GGG | 0.609921 | tig0021957:-19665 | Msa1395600:CDS |
GTGAAGAAGGTCGTGAATGG+CGG | 0.623350 | tig0021957:+26736 | None:intergenic |
ATTTCTCAGGTGAATCCAGA+GGG | 0.628396 | tig0021957:+19587 | None:intergenic |
AAAATAATAGCGTTTGCTAG+CGG | 0.631693 | tig0021957:+17834 | None:intergenic |
AGTGAAATAACTGAAATCAG+AGG | 0.636605 | tig0021957:+17553 | None:intergenic |
TAGCACAACAGCAGCTACCA+AGG | 0.646137 | tig0021957:-19632 | Msa1395600:CDS |
CATTTCTCAGGTGAATCCAG+AGG | 0.648928 | tig0021957:+19586 | None:intergenic |
CAGTAACCCCAACTTTGCAA+GGG | 0.649154 | tig0021957:+19732 | None:intergenic |
ACTCTTCTGGATCAGTTGGG+AGG | 0.664251 | tig0021957:+18817 | None:intergenic |
CAGTGGAGAAAGCACGTGTG+TGG | 0.666279 | tig0021957:+26616 | None:intergenic |
TCTTTCCTGAGAAAGGCGGT+GGG | 0.676220 | tig0021957:+24986 | None:intergenic |
GCCGTCAATGGCAACCACGG+CGG | 0.685166 | tig0021957:-26775 | None:intergenic |
CACAGTGGTCAGTTCTACAG+AGG | 0.694925 | tig0021957:+19537 | None:intergenic |
AGAGTTATATACGTCAGATG+CGG | 0.699233 | tig0021957:-24966 | Msa1395600:CDS |
TAACTCTTTCCTGAGAAAGG+CGG | 0.699719 | tig0021957:+24982 | None:intergenic |
GAACGCGTCGAGAAAAGCAG+AGG | 0.699841 | tig0021957:+26638 | None:intergenic |
TGAACAATAAACGGTAACAG+AGG | 0.705831 | tig0021957:+24895 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATGTAATATATAAATAAAG+AGG | - | tig0021957:19398-19417 | Msa1395600:CDS | 10.0% |
!!! | AATTAAATAATGTCTAAAAT+CGG | - | tig0021957:19468-19487 | Msa1395600:intron | 10.0% |
!! | TATAGTTATGAAAAATAATA+AGG | + | tig0021957:23645-23664 | None:intergenic | 10.0% |
!! | AATAATTAAAAAGAATTCTT+TGG | + | tig0021957:24124-24143 | None:intergenic | 10.0% |
!!! | AGTTAAAATTAACATATTTT+AGG | - | tig0021957:24227-24246 | Msa1395600:intron | 10.0% |
!! | ATATATCATTAAAACATTAT+CGG | - | tig0021957:24615-24634 | Msa1395600:intron | 10.0% |
!!! | TTGTAAAAAAAAAAGATTTT+GGG | - | tig0021957:25561-25580 | Msa1395600:intron | 10.0% |
!!! | ATGTTTTTAAATAGAATTAT+TGG | + | tig0021957:25818-25837 | None:intergenic | 10.0% |
!! | TGTATATAATACTATAAGAA+AGG | + | tig0021957:18999-19018 | None:intergenic | 15.0% |
!!! | TTCAAAAACATATTCTATTT+TGG | + | tig0021957:19520-19539 | None:intergenic | 15.0% |
!! | AAAATTAAGAAATCAAATCA+GGG | + | tig0021957:22348-22367 | None:intergenic | 15.0% |
!!! | AAATTAACATATTTTAGGAA+AGG | - | tig0021957:24232-24251 | Msa1395600:intron | 15.0% |
!!! | ATGTTTTCATAAAGTAAATA+TGG | - | tig0021957:24265-24284 | Msa1395600:intron | 15.0% |
!! | TGAAAAATCAGTAAATAATT+AGG | + | tig0021957:25247-25266 | None:intergenic | 15.0% |
!!! | GTTGTAAAAAAAAAAGATTT+TGG | - | tig0021957:25560-25579 | Msa1395600:intron | 15.0% |
!!! | AGAATATATTTTGATATAGA+TGG | - | tig0021957:25940-25959 | Msa1395600:intron | 15.0% |
!!! | GAATATATTTTGATATAGAT+GGG | - | tig0021957:25941-25960 | Msa1395600:intron | 15.0% |
!! | CATAAAATACACAATAAATA+TGG | + | tig0021957:26580-26599 | None:intergenic | 15.0% |
!! | AAAATTGTGTAAATATTGAA+GGG | - | tig0021957:26712-26731 | Msa1395600:CDS | 15.0% |
!!! | TTTGTTATAGTAGTTACATT+AGG | - | tig0021957:18011-18030 | Msa1395600:intron | 20.0% |
!! | AATTCAGTATTTGAATATTC+AGG | - | tig0021957:18338-18357 | Msa1395600:intron | 20.0% |
!! | TTAACCAAAATCAACTTTAA+AGG | + | tig0021957:18715-18734 | None:intergenic | 20.0% |
!!! | TCTCATTTTCTAATCATAAA+AGG | + | tig0021957:18951-18970 | None:intergenic | 20.0% |
!! | AAATACTTATGGAAAAAGAA+AGG | + | tig0021957:19032-19051 | None:intergenic | 20.0% |
!! | TTAAGTAGATGAAATACTTA+TGG | + | tig0021957:19043-19062 | None:intergenic | 20.0% |
!! | AAAGAAAATTCATTTCTCTA+GGG | + | tig0021957:19272-19291 | None:intergenic | 20.0% |
!! | AAAAGAAAATTCATTTCTCT+AGG | + | tig0021957:19273-19292 | None:intergenic | 20.0% |
!!! | GTATCACTTAATGTTTTTTT+AGG | + | tig0021957:19616-19635 | None:intergenic | 20.0% |
!! | ATTCATGAGAAACTAAAATA+TGG | - | tig0021957:20731-20750 | Msa1395600:intron | 20.0% |
!! | GTTTAACAAAAAATTCACTA+TGG | - | tig0021957:20779-20798 | Msa1395600:intron | 20.0% |
!!! | AATTTAACAGAATTTTCTCA+CGG | - | tig0021957:21439-21458 | Msa1395600:intron | 20.0% |
!! | AAGTATTTAACACGATATTT+GGG | - | tig0021957:21736-21755 | Msa1395600:intron | 20.0% |
!! | ATTTATGTTCTTGATTTATC+AGG | - | tig0021957:22191-22210 | Msa1395600:intron | 20.0% |
!! | CAAAATTAAGAAATCAAATC+AGG | + | tig0021957:22349-22368 | None:intergenic | 20.0% |
!!! | TTACTTTATCTTGATTTTAC+GGG | + | tig0021957:22975-22994 | None:intergenic | 20.0% |
!!! | GTTACTTTATCTTGATTTTA+CGG | + | tig0021957:22976-22995 | None:intergenic | 20.0% |
!! | CTTATTAATCAGATTATGAT+AGG | + | tig0021957:23278-23297 | None:intergenic | 20.0% |
!! | CTATCATAATCTGATTAATA+AGG | - | tig0021957:23276-23295 | Msa1395600:intron | 20.0% |
!!! | TATATTTCTACTTACTAAGT+TGG | - | tig0021957:23661-23680 | Msa1395600:intron | 20.0% |
!!! | AAATGTTTTCACAAAGTAAA+CGG | + | tig0021957:24001-24020 | None:intergenic | 20.0% |
!! | AGTTCAAACTTAAAAAACTT+AGG | + | tig0021957:24291-24310 | None:intergenic | 20.0% |
!! | GTAGCAAATTAAAAACAAAA+TGG | + | tig0021957:25035-25054 | None:intergenic | 20.0% |
!! | AGTAAATAATTAGGCATTAA+AGG | + | tig0021957:25238-25257 | None:intergenic | 20.0% |
!!! | GTTTTTAATAAGAGGAATAA+AGG | + | tig0021957:25533-25552 | None:intergenic | 20.0% |
!!! | CAAAATCTGTTTTTAATAAG+AGG | + | tig0021957:25541-25560 | None:intergenic | 20.0% |
!!! | TATATGTATTTGAGAAGTAT+CGG | + | tig0021957:25848-25867 | None:intergenic | 20.0% |
!! | AAATTGTGATAATAACAAGT+AGG | + | tig0021957:25986-26005 | None:intergenic | 20.0% |
!! | AGCAAAATGAAAATAAGAAA+AGG | + | tig0021957:26357-26376 | None:intergenic | 20.0% |
!! | TGTAAAGCAAAAATAAAATG+AGG | + | tig0021957:26626-26645 | None:intergenic | 20.0% |
!! | CAAAATTGTGTAAATATTGA+AGG | - | tig0021957:26711-26730 | Msa1395600:CDS | 20.0% |
! | ATAAGAATAGGAGATATTGA+AGG | + | tig0021957:17688-17707 | None:intergenic | 25.0% |
! | ATATCTCCTATTCTTATTAC+TGG | - | tig0021957:17691-17710 | Msa1395600:CDS | 25.0% |
! | TAACTACCAGTAATAAGAAT+AGG | + | tig0021957:17700-17719 | None:intergenic | 25.0% |
!! | TGTTTTCGTATAAGTTATCT+TGG | - | tig0021957:17827-17846 | Msa1395600:CDS | 25.0% |
! | TTTGTGCTTATTTACTGTTT+AGG | + | tig0021957:17918-17937 | None:intergenic | 25.0% |
! | ACTGAACCTTAGTTTAATAT+TGG | - | tig0021957:17951-17970 | Msa1395600:intron | 25.0% |
! | GCTTAACCAATATTAAACTA+AGG | + | tig0021957:17960-17979 | None:intergenic | 25.0% |
!! | TTTCGAAATTAAGACTTGTT+TGG | - | tig0021957:18089-18108 | Msa1395600:intron | 25.0% |
! | AACTATAATTTCGTCTACTT+TGG | - | tig0021957:18366-18385 | Msa1395600:intron | 25.0% |
!!! | TGATCCTTTAAAGTTGATTT+TGG | - | tig0021957:18708-18727 | Msa1395600:intron | 25.0% |
! | AAGGTAAAGTGATTTATGTT+TGG | - | tig0021957:18748-18767 | Msa1395600:intron | 25.0% |
!!! | TTTTGGCTATAATGTAACAT+AGG | + | tig0021957:19312-19331 | None:intergenic | 25.0% |
!! | CTACAATTTAAAACCATTCA+TGG | + | tig0021957:19434-19453 | None:intergenic | 25.0% |
!! | ATAATGTCTAAAATCGGAAA+AGG | - | tig0021957:19474-19493 | Msa1395600:intron | 25.0% |
!! | TAATGTCTAAAATCGGAAAA+GGG | - | tig0021957:19475-19494 | Msa1395600:intron | 25.0% |
! | AATAACCATCAAAAACTTGT+TGG | + | tig0021957:19746-19765 | None:intergenic | 25.0% |
! | AAACTAGCATTCAAACAATT+AGG | + | tig0021957:19902-19921 | None:intergenic | 25.0% |
! | TTGTGGTAAAAAGAAAGTTT+CGG | - | tig0021957:19926-19945 | Msa1395600:intron | 25.0% |
! | AACAAAATGTAACTCCTAAA+AGG | + | tig0021957:20057-20076 | None:intergenic | 25.0% |
!! | AAAACTCAACTAATTTTGCA+AGG | + | tig0021957:20091-20110 | None:intergenic | 25.0% |
!!! | GAACTAAAAAATTGTTTTGG+AGG | - | tig0021957:20373-20392 | Msa1395600:intron | 25.0% |
! | ACACTTTCAAAAAATGTGAA+AGG | - | tig0021957:20495-20514 | Msa1395600:intron | 25.0% |
!! | CTTTTGTTAGGTATACTTTT+CGG | + | tig0021957:20590-20609 | None:intergenic | 25.0% |
!! | GAAAAGTATACCTAACAAAA+GGG | - | tig0021957:20589-20608 | Msa1395600:intron | 25.0% |
!! | AAAAGTATACCTAACAAAAG+GGG | - | tig0021957:20590-20609 | Msa1395600:intron | 25.0% |
! | ATGTTCAATTGATAGGAAAT+CGG | + | tig0021957:20656-20675 | None:intergenic | 25.0% |
! | ATCACAAATGTTCAATTGAT+AGG | + | tig0021957:20663-20682 | None:intergenic | 25.0% |
! | GAACATTTGTGATTAAGAAA+TGG | - | tig0021957:20670-20689 | Msa1395600:intron | 25.0% |
!!! | TGTGTTTTTAATTTAACTCC+AGG | - | tig0021957:20805-20824 | Msa1395600:intron | 25.0% |
! | TGTAATTATGTTTGCTCAAT+AGG | + | tig0021957:21134-21153 | None:intergenic | 25.0% |
! | ATTGAGCAAACATAATTACA+AGG | - | tig0021957:21134-21153 | Msa1395600:intron | 25.0% |
! | TCCAACACAATTTGATTATA+TGG | - | tig0021957:21210-21229 | Msa1395600:intron | 25.0% |
! | TCCATATAATCAAATTGTGT+TGG | + | tig0021957:21214-21233 | None:intergenic | 25.0% |
! | TTTAACATGCTAATTATTGC+AGG | - | tig0021957:21396-21415 | Msa1395600:intron | 25.0% |
! | TTAACATGCTAATTATTGCA+GGG | - | tig0021957:21397-21416 | Msa1395600:intron | 25.0% |
! | GAGAAAATTCTGTTAAATTC+TGG | + | tig0021957:21438-21457 | None:intergenic | 25.0% |
! | GATAATTTAAAGATCCATCA+TGG | + | tig0021957:21551-21570 | None:intergenic | 25.0% |
!! | AATTTATTATTGCGCTTTTG+TGG | - | tig0021957:21676-21695 | Msa1395600:intron | 25.0% |
! | CAAATATCGTGTTAAATACT+TGG | + | tig0021957:21737-21756 | None:intergenic | 25.0% |
! | CAAGTATTTAACACGATATT+TGG | - | tig0021957:21735-21754 | Msa1395600:intron | 25.0% |
! | AGTATTTAACACGATATTTG+GGG | - | tig0021957:21737-21756 | Msa1395600:intron | 25.0% |
! | ATCTAAAGGTAATTGATCTA+TGG | - | tig0021957:21816-21835 | Msa1395600:intron | 25.0% |
! | TTCAATCATAGGTTTCTTAA+AGG | + | tig0021957:22220-22239 | None:intergenic | 25.0% |
! | ACAAATAGTGTTTAAGAATG+TGG | - | tig0021957:22404-22423 | Msa1395600:intron | 25.0% |
! | GTAACAACACAAAATATGTA+AGG | + | tig0021957:22584-22603 | None:intergenic | 25.0% |
!! | TGTCATTTATCCAATTAACA+CGG | + | tig0021957:22606-22625 | None:intergenic | 25.0% |
!! | AGATGCATTTTGTGAATTTA+TGG | - | tig0021957:22632-22651 | Msa1395600:CDS | 25.0% |
! | TAAAATGTGTAGTCAATTCT+GGG | + | tig0021957:22736-22755 | None:intergenic | 25.0% |
! | TTTACGAATAAAACTACGTT+CGG | - | tig0021957:22752-22771 | Msa1395600:intron | 25.0% |
! | AAATGAAAATAGACTCTGAT+AGG | + | tig0021957:22907-22926 | None:intergenic | 25.0% |
! | TCAAAACAAAGTTAATCTGA+TGG | - | tig0021957:22947-22966 | Msa1395600:intron | 25.0% |
!! | TTATTGTTGTTGAGTCTATT+AGG | + | tig0021957:23126-23145 | None:intergenic | 25.0% |
! | AAATCCTTAGAATTCAGTTA+CGG | + | tig0021957:23196-23215 | None:intergenic | 25.0% |
!! | ATATATTCTAGAAGAAAGTG+GGG | + | tig0021957:23248-23267 | None:intergenic | 25.0% |
!! | GATATATTCTAGAAGAAAGT+GGG | + | tig0021957:23249-23268 | None:intergenic | 25.0% |
!! | TGATATATTCTAGAAGAAAG+TGG | + | tig0021957:23250-23269 | None:intergenic | 25.0% |
!!! | ACTTTCTTCTAGAATATATC+AGG | - | tig0021957:23249-23268 | Msa1395600:intron | 25.0% |
! | ATAGGAACTTACAAAAGAAT+AGG | - | tig0021957:23461-23480 | Msa1395600:intron | 25.0% |
! | TAGGAACTTACAAAAGAATA+GGG | - | tig0021957:23462-23481 | Msa1395600:intron | 25.0% |
!!! | TCAAGTTACCGATTTTATTT+GGG | + | tig0021957:23712-23731 | None:intergenic | 25.0% |
!!! | TTCAAGTTACCGATTTTATT+TGG | + | tig0021957:23713-23732 | None:intergenic | 25.0% |
! | TTACTGTAATTTATTCTTGC+AGG | - | tig0021957:23898-23917 | Msa1395600:intron | 25.0% |
! | TACTGTAATTTATTCTTGCA+GGG | - | tig0021957:23899-23918 | Msa1395600:intron | 25.0% |
!! | AATGTTTTCACAAAGTAAAC+GGG | + | tig0021957:24000-24019 | None:intergenic | 25.0% |
!!! | TGTTAGTTTTAGTTGCTAAA+AGG | - | tig0021957:24044-24063 | Msa1395600:intron | 25.0% |
!! | AATAAAACATTGTGATGGAA+AGG | + | tig0021957:24182-24201 | None:intergenic | 25.0% |
! | CTTGAAATAAAACATTGTGA+TGG | + | tig0021957:24187-24206 | None:intergenic | 25.0% |
!! | ACTAGTTTGTGAAAAATTCT+TGG | + | tig0021957:24643-24662 | None:intergenic | 25.0% |
!! | AAGAATTTTTCACAAACTAG+TGG | - | tig0021957:24642-24661 | Msa1395600:intron | 25.0% |
! | TATCGCTACTATTTAGAAAT+GGG | + | tig0021957:24694-24713 | None:intergenic | 25.0% |
! | TTATCGCTACTATTTAGAAA+TGG | + | tig0021957:24695-24714 | None:intergenic | 25.0% |
! | AGAATAACTTACTTTAGCAA+AGG | + | tig0021957:24731-24750 | None:intergenic | 25.0% |
! | GCAAATTAAAAACAAAATGG+AGG | + | tig0021957:25032-25051 | None:intergenic | 25.0% |
!!! | TTGTTTTTAATTTGCTACTC+TGG | - | tig0021957:25037-25056 | Msa1395600:intron | 25.0% |
!!! | GGTTTTATGTATAAAATACG+TGG | - | tig0021957:25116-25135 | Msa1395600:intron | 25.0% |
! | TATGTATAAAATACGTGGTT+TGG | - | tig0021957:25121-25140 | Msa1395600:intron | 25.0% |
! | ATCAAAAAATCAAACTCTTC+TGG | + | tig0021957:25301-25320 | None:intergenic | 25.0% |
!! | ATGCATATTCAAGTGTTTTA+TGG | + | tig0021957:25421-25440 | None:intergenic | 25.0% |
!!! | TGATAGTTTGTTTATCGAAT+GGG | - | tig0021957:25459-25478 | Msa1395600:intron | 25.0% |
! | CAACAAGATAATCAGTATTA+CGG | + | tig0021957:25493-25512 | None:intergenic | 25.0% |
!! | TTCTTCTTTTGAACAGATTT+TGG | - | tig0021957:25593-25612 | Msa1395600:intron | 25.0% |
! | GTTGATGTTAAACTGAAAAT+CGG | + | tig0021957:25651-25670 | None:intergenic | 25.0% |
!! | ATTTTCAGTTTAACATCAAC+AGG | - | tig0021957:25651-25670 | Msa1395600:intron | 25.0% |
! | TAGAATTATTGGATACTTTC+TGG | + | tig0021957:25807-25826 | None:intergenic | 25.0% |
! | TATAATTTCGTGTCTTTAGT+AGG | + | tig0021957:25887-25906 | None:intergenic | 25.0% |
! | ACTAAAGACACGAAATTATA+TGG | - | tig0021957:25887-25906 | Msa1395600:intron | 25.0% |
! | TCTTATTCTTTCCTAGAAAT+TGG | - | tig0021957:26143-26162 | Msa1395600:intron | 25.0% |
! | GAAAATGAAATCCAATTTCT+AGG | + | tig0021957:26157-26176 | None:intergenic | 25.0% |
!! | TTTTTCTTCAATTTTCTGCA+TGG | - | tig0021957:26178-26197 | Msa1395600:intron | 25.0% |
!!! | TCTTATTTTCATTTTGCTCA+TGG | - | tig0021957:26359-26378 | Msa1395600:intron | 25.0% |
!!! | CTTATTTTCATTTTGCTCAT+GGG | - | tig0021957:26360-26379 | Msa1395600:intron | 25.0% |
!! | TCCTGCTTATAAGAAATTTT+TGG | - | tig0021957:26471-26490 | Msa1395600:intron | 25.0% |
! | TCCAAAAATTTCTTATAAGC+AGG | + | tig0021957:26475-26494 | None:intergenic | 25.0% |
!!! | AGACATGGATTTTTTAATTG+GGG | + | tig0021957:26764-26783 | None:intergenic | 25.0% |
!!! | GAGACATGGATTTTTTAATT+GGG | + | tig0021957:26765-26784 | None:intergenic | 25.0% |
!!! | AGAGACATGGATTTTTTAAT+TGG | + | tig0021957:26766-26785 | None:intergenic | 25.0% |
ACTGGTAGTTACATGTTATT+TGG | - | tig0021957:17709-17728 | Msa1395600:intron | 30.0% | |
!! | AAGTTGATACAATGAGTGTA+GGG | + | tig0021957:18055-18074 | None:intergenic | 30.0% |
TATTATTCACAAGCTTGTCA+AGG | - | tig0021957:18158-18177 | Msa1395600:intron | 30.0% | |
ATCGAAGATCAAACAACAAT+TGG | + | tig0021957:18297-18316 | None:intergenic | 30.0% | |
TCAGTATTTGAATATTCAGG+TGG | - | tig0021957:18341-18360 | Msa1395600:intron | 30.0% | |
! | AGTTCATTGTTTCTTTCTCT+TGG | - | tig0021957:18494-18513 | Msa1395600:intron | 30.0% |
!! | GGTTAAAATTGAGTTGAAGA+AGG | - | tig0021957:18729-18748 | Msa1395600:intron | 30.0% |
! | GCTTCAAGTAGAATCAATTT+TGG | - | tig0021957:18861-18880 | Msa1395600:intron | 30.0% |
! | TCAAGTAGAATCAATTTTGG+AGG | - | tig0021957:18864-18883 | Msa1395600:intron | 30.0% |
! | CAAGTAGAATCAATTTTGGA+GGG | - | tig0021957:18865-18884 | Msa1395600:intron | 30.0% |
!! | ATTGTAGCTTTTGATTCTAG+CGG | + | tig0021957:18836-18855 | None:intergenic | 30.0% |
ATATAACTCTTTCCTGAGAA+AGG | + | tig0021957:19126-19145 | None:intergenic | 30.0% | |
AATGTAACATAGGTAACTGT+GGG | + | tig0021957:19302-19321 | None:intergenic | 30.0% | |
TAATGTAACATAGGTAACTG+TGG | + | tig0021957:19303-19322 | None:intergenic | 30.0% | |
AGGAAAAGAAAAACCATGAA+TGG | - | tig0021957:19418-19437 | Msa1395600:CDS | 30.0% | |
GTATGCTATGAGATAATGTA+TGG | + | tig0021957:19674-19693 | None:intergenic | 30.0% | |
TCTTCAAGTATAAACTGTCA+AGG | + | tig0021957:19696-19715 | None:intergenic | 30.0% | |
! | GATTTCCAACAAGTTTTTGA+TGG | - | tig0021957:19738-19757 | Msa1395600:CDS | 30.0% |
!!! | TGAATGCTAGTTTTTTGTTG+TGG | - | tig0021957:19909-19928 | Msa1395600:intron | 30.0% |
CGAAAGGAAAATAATTTCCT+TGG | + | tig0021957:20119-20138 | None:intergenic | 30.0% | |
AAGAAATAGATGACTTTGGA+AGG | - | tig0021957:20296-20315 | Msa1395600:intron | 30.0% | |
! | ATACAAAATCCTCCTAGTTT+TGG | - | tig0021957:20349-20368 | Msa1395600:intron | 30.0% |
!! | TACAAAATCCTCCTAGTTTT+GGG | - | tig0021957:20350-20369 | Msa1395600:intron | 30.0% |
!!! | TTTTTTAGTTCCCCAAAACT+AGG | + | tig0021957:20364-20383 | None:intergenic | 30.0% |
! | GGGGAACTAAAAAATTGTTT+TGG | - | tig0021957:20370-20389 | Msa1395600:intron | 30.0% |
!!! | CTAAAAAATTGTTTTGGAGG+AGG | - | tig0021957:20376-20395 | Msa1395600:intron | 30.0% |
!!! | TATACTTTTCGGCTTTGTTT+GGG | + | tig0021957:20579-20598 | None:intergenic | 30.0% |
! | CGAAAAGTATACCTAACAAA+AGG | - | tig0021957:20588-20607 | Msa1395600:intron | 30.0% |
AAAGTATACCTAACAAAAGG+GGG | - | tig0021957:20591-20610 | Msa1395600:intron | 30.0% | |
TAGCTGATATTTGACAACAT+TGG | + | tig0021957:20942-20961 | None:intergenic | 30.0% | |
ATGTTGTCAAATATCAGCTA+TGG | - | tig0021957:20942-20961 | Msa1395600:intron | 30.0% | |
TGAAGTGGTTTATTCATTCA+TGG | + | tig0021957:21170-21189 | None:intergenic | 30.0% | |
TGAATGAATAAACCACTTCA+TGG | - | tig0021957:21170-21189 | Msa1395600:intron | 30.0% | |
GAATGAATAAACCACTTCAT+GGG | - | tig0021957:21171-21190 | Msa1395600:intron | 30.0% | |
TTAAATCATTCAGCAACGAT+GGG | + | tig0021957:21381-21400 | None:intergenic | 30.0% | |
! | AATTTTCTCACGGTTATTCA+GGG | - | tig0021957:21449-21468 | Msa1395600:intron | 30.0% |
TCTTCACTATGTTATTGTTC+AGG | - | tig0021957:21498-21517 | Msa1395600:intron | 30.0% | |
CTATGTTATTGTTCAGGTAA+TGG | - | tig0021957:21504-21523 | Msa1395600:intron | 30.0% | |
TGGGGATCTGATATAATAAA+AGG | - | tig0021957:21755-21774 | Msa1395600:intron | 30.0% | |
! | AATAAGTCTGCAAGCTATTT+TGG | + | tig0021957:21794-21813 | None:intergenic | 30.0% |
! | AAAATAGCTTGCAGACTTAT+TGG | - | tig0021957:21793-21812 | Msa1395600:intron | 30.0% |
!!! | CATTTTTGACTTGTTATCCA+AGG | - | tig0021957:22251-22270 | Msa1395600:intron | 30.0% |
!! | TATACTTGTTATACTCACCT+TGG | + | tig0021957:22271-22290 | None:intergenic | 30.0% |
GTTCATCGAGTTAAACTTAA+AGG | - | tig0021957:22438-22457 | Msa1395600:intron | 30.0% | |
GTAAGGATTAAAATTACCTG+AGG | + | tig0021957:22567-22586 | None:intergenic | 30.0% | |
AGTAGACCATATATGATAGA+TGG | - | tig0021957:22656-22675 | Msa1395600:CDS | 30.0% | |
GTAAAATGTGTAGTCAATTC+TGG | + | tig0021957:22737-22756 | None:intergenic | 30.0% | |
TGTATGGTTTCAGAAGATTA+AGG | - | tig0021957:22836-22855 | Msa1395600:intron | 30.0% | |
AATGATAAAGATGAGCTCAA+AGG | - | tig0021957:23008-23027 | Msa1395600:intron | 30.0% | |
TTGTGTAGTGATATTCATTC+AGG | + | tig0021957:23150-23169 | None:intergenic | 30.0% | |
! | GTTACGGATTTTCTATATGA+CGG | + | tig0021957:23180-23199 | None:intergenic | 30.0% |
AAATCCGTAACTGAATTCTA+AGG | - | tig0021957:23189-23208 | Msa1395600:intron | 30.0% | |
!!! | TTCTCCTATTTTGAAACCAA+AGG | - | tig0021957:23381-23400 | Msa1395600:intron | 30.0% |
! | TCTACCTTTGGTTTCAAAAT+AGG | + | tig0021957:23388-23407 | None:intergenic | 30.0% |
!!! | TATTTTGAAACCAAAGGTAG+AGG | - | tig0021957:23387-23406 | Msa1395600:intron | 30.0% |
AGTTCCTATCAAATTGACAA+GGG | + | tig0021957:23450-23469 | None:intergenic | 30.0% | |
AAGTTCCTATCAAATTGACA+AGG | + | tig0021957:23451-23470 | None:intergenic | 30.0% | |
!! | CTTGTCGATTTGATAGATTT+GGG | + | tig0021957:23549-23568 | None:intergenic | 30.0% |
ACACTTTCCTCTTCATTTAT+AGG | - | tig0021957:23613-23632 | Msa1395600:intron | 30.0% | |
GTACCTATCCCAAATAAAAT+CGG | - | tig0021957:23701-23720 | Msa1395600:intron | 30.0% | |
!!! | TTACCGATTTTATTTGGGAT+AGG | + | tig0021957:23707-23726 | None:intergenic | 30.0% |
TCGGTAACTTGAAACTATAT+TGG | - | tig0021957:23720-23739 | Msa1395600:intron | 30.0% | |
!!! | TTGGCAGTTGCTTTATTTTA+CGG | - | tig0021957:23826-23845 | Msa1395600:intron | 30.0% |
AGACTACAACTTTCAGATTA+CGG | + | tig0021957:23875-23894 | None:intergenic | 30.0% | |
ACTGTAATTTATTCTTGCAG+GGG | - | tig0021957:23900-23919 | Msa1395600:intron | 30.0% | |
! | TATTGGTAATCCAATAGAGT+TGG | + | tig0021957:23928-23947 | None:intergenic | 30.0% |
AACTAGCGTTAATGAACTAT+TGG | + | tig0021957:23945-23964 | None:intergenic | 30.0% | |
! | ATGTTTTCACAAAGTAAACG+GGG | + | tig0021957:23999-24018 | None:intergenic | 30.0% |
ATTGAACAATTGTGTGCATT+TGG | - | tig0021957:24084-24103 | Msa1395600:intron | 30.0% | |
! | TATTTAGGGATCATGCATTT+TGG | + | tig0021957:24148-24167 | None:intergenic | 30.0% |
! | AGGAGATGAAATGCTATTTA+GGG | + | tig0021957:24162-24181 | None:intergenic | 30.0% |
! | AAGGAGATGAAATGCTATTT+AGG | + | tig0021957:24163-24182 | None:intergenic | 30.0% |
CTTTATAATTTCTCCAGTGT+GGG | - | tig0021957:24775-24794 | Msa1395600:intron | 30.0% | |
TGGGTGAAGAATTAATAGAA+AGG | - | tig0021957:24794-24813 | Msa1395600:intron | 30.0% | |
GGGTGAAGAATTAATAGAAA+GGG | - | tig0021957:24795-24814 | Msa1395600:intron | 30.0% | |
CCAAGAACTATGATAACAAA+AGG | + | tig0021957:24826-24845 | None:intergenic | 30.0% | |
!! | CCTTTTGTTATCATAGTTCT+TGG | - | tig0021957:24823-24842 | Msa1395600:intron | 30.0% |
TCAAGTGCTAATCTGTATAT+GGG | + | tig0021957:24886-24905 | None:intergenic | 30.0% | |
ATCAAGTGCTAATCTGTATA+TGG | + | tig0021957:24887-24906 | None:intergenic | 30.0% | |
ATACAGATTAGCACTTGATA+AGG | - | tig0021957:24888-24907 | Msa1395600:intron | 30.0% | |
GATTAAAAGTCATAGTTCAG+AGG | + | tig0021957:25155-25174 | None:intergenic | 30.0% | |
!! | TTTTGATTCTTTCATCCCAA+TGG | - | tig0021957:25314-25333 | Msa1395600:intron | 30.0% |
TTTGATTCTTTCATCCCAAT+GGG | - | tig0021957:25315-25334 | Msa1395600:intron | 30.0% | |
TTGAATATGCATTTGACAGA+GGG | - | tig0021957:25429-25448 | Msa1395600:intron | 30.0% | |
!! | GTGATAGTTTGTTTATCGAA+TGG | - | tig0021957:25458-25477 | Msa1395600:intron | 30.0% |
!!! | TTTGAACAGATTTTGGAACT+TGG | - | tig0021957:25600-25619 | Msa1395600:intron | 30.0% |
TTTAACATCAACAGGCAAAA+TGG | - | tig0021957:25659-25678 | Msa1395600:CDS | 30.0% | |
!! | TAGTACATATCGACTTCATA+GGG | + | tig0021957:25718-25737 | None:intergenic | 30.0% |
! | CTACAGAAATCGAAAAGTAT+TGG | - | tig0021957:25735-25754 | Msa1395600:CDS | 30.0% |
GAAGCATAATATTTGTGAAG+AGG | + | tig0021957:26115-26134 | None:intergenic | 30.0% | |
! | CTTTGAAAGAGTTGCAAATA+TGG | - | tig0021957:26230-26249 | Msa1395600:intron | 30.0% |
! | AAAATAATAGCGTTTGCTAG+CGG | + | tig0021957:26271-26290 | None:intergenic | 30.0% |
!!! | AGCAAACGCTATTATTTTGA+TGG | - | tig0021957:26273-26292 | Msa1395600:intron | 30.0% |
! | GAAAGTTTGAACACTGATTA+AGG | + | tig0021957:26335-26354 | None:intergenic | 30.0% |
TTTACATGATTCTGGACAAA+AGG | - | tig0021957:26408-26427 | Msa1395600:intron | 30.0% | |
AGTGAAATAACTGAAATCAG+AGG | + | tig0021957:26552-26571 | None:intergenic | 30.0% | |
TTGTGTAAATATTGAAGGGA+TGG | - | tig0021957:26716-26735 | Msa1395600:CDS | 30.0% | |
!!! | ATTTTTTAATTGGGGGACAA+TGG | + | tig0021957:26756-26775 | None:intergenic | 30.0% |
!!! | GACATGGATTTTTTAATTGG+GGG | + | tig0021957:26763-26782 | None:intergenic | 30.0% |
AAATCCAGTAAGATCGTGAA+AGG | + | tig0021957:17656-17675 | None:intergenic | 35.0% | |
! | TACATGTTATTTGGCACTGT+TGG | - | tig0021957:17718-17737 | Msa1395600:intron | 35.0% |
! | ACATGTTATTTGGCACTGTT+GGG | - | tig0021957:17719-17738 | Msa1395600:intron | 35.0% |
GGTGAACTTGTGAAAATAAG+CGG | - | tig0021957:17848-17867 | Msa1395600:CDS | 35.0% | |
!! | GAAGTTGATACAATGAGTGT+AGG | + | tig0021957:18056-18075 | None:intergenic | 35.0% |
ACTTGTTCTTCTTTGTCCTT+TGG | - | tig0021957:18396-18415 | Msa1395600:intron | 35.0% | |
TTGTGAAGCGTAAAAACCAA+AGG | + | tig0021957:18415-18434 | None:intergenic | 35.0% | |
GCACATGATACTCACATTTA+GGG | + | tig0021957:18462-18481 | None:intergenic | 35.0% | |
AGCACATGATACTCACATTT+AGG | + | tig0021957:18463-18482 | None:intergenic | 35.0% | |
ATCTCTTTCATTTCACAACG+TGG | - | tig0021957:18649-18668 | Msa1395600:intron | 35.0% | |
TTCATTTCACAACGTGGATT+AGG | - | tig0021957:18655-18674 | Msa1395600:intron | 35.0% | |
! | TCATTTCACAACGTGGATTA+GGG | - | tig0021957:18656-18675 | Msa1395600:intron | 35.0% |
AGAGTTATATACGTCAGATG+CGG | - | tig0021957:19136-19155 | Msa1395600:intron | 35.0% | |
TGAACAATAAACGGTAACAG+AGG | + | tig0021957:19210-19229 | None:intergenic | 35.0% | |
TCTGTTACCGTTTATTGTTC+AGG | - | tig0021957:19209-19228 | Msa1395600:CDS | 35.0% | |
TGTGTCACCTGAACAATAAA+CGG | + | tig0021957:19219-19238 | None:intergenic | 35.0% | |
AGGTGACACATCTAAATTCA+TGG | - | tig0021957:19229-19248 | Msa1395600:intron | 35.0% | |
GGTGACACATCTAAATTCAT+GGG | - | tig0021957:19230-19249 | Msa1395600:intron | 35.0% | |
!! | TCTTTCTTGGTGGTTGTTTT+TGG | + | tig0021957:19329-19348 | None:intergenic | 35.0% |
!! | CATATTCTATTTTGGACGAG+AGG | + | tig0021957:19512-19531 | None:intergenic | 35.0% |
! | GTATGGTCTCTAGAAATGAT+TGG | + | tig0021957:19657-19676 | None:intergenic | 35.0% |
ATTCTTGCATCATTGAGTTC+AGG | - | tig0021957:19716-19735 | Msa1395600:CDS | 35.0% | |
GATGCTCTGTTTAGATCAAA+TGG | + | tig0021957:19859-19878 | None:intergenic | 35.0% | |
! | TGATCTAAACAGAGCATCTT+TGG | - | tig0021957:19861-19880 | Msa1395600:intron | 35.0% |
TGGTAAAAAGAAAGTTTCGG+TGG | - | tig0021957:19929-19948 | Msa1395600:intron | 35.0% | |
TAAAAAGAAAGTTTCGGTGG+AGG | - | tig0021957:19932-19951 | Msa1395600:intron | 35.0% | |
AAAAAGAAAGTTTCGGTGGA+GGG | - | tig0021957:19933-19952 | Msa1395600:intron | 35.0% | |
! | TCTGGTGGTATTTTATTGGT+AGG | + | tig0021957:20025-20044 | None:intergenic | 35.0% |
! | AGCTTCTGGTGGTATTTTAT+TGG | + | tig0021957:20029-20048 | None:intergenic | 35.0% |
! | AACTAATTTTGCAAGGCAAC+TGG | + | tig0021957:20084-20103 | None:intergenic | 35.0% |
!! | TAGTTGAGTTTTAGCATCCA+AGG | - | tig0021957:20099-20118 | Msa1395600:intron | 35.0% |
!! | TCAGTTACGCTTTATTTCAG+TGG | - | tig0021957:20145-20164 | Msa1395600:intron | 35.0% |
!! | TACGCTTTATTTCAGTGGAT+AGG | - | tig0021957:20150-20169 | Msa1395600:intron | 35.0% |
!! | ACGCTTTATTTCAGTGGATA+GGG | - | tig0021957:20151-20170 | Msa1395600:intron | 35.0% |
AGTACTTATAAATGCGCCAA+AGG | - | tig0021957:20185-20204 | Msa1395600:intron | 35.0% | |
TTATAAATGCGCCAAAGGTA+AGG | - | tig0021957:20190-20209 | Msa1395600:intron | 35.0% | |
GTGGAAGAAATAGATGACTT+TGG | - | tig0021957:20292-20311 | Msa1395600:intron | 35.0% | |
! | AATAGATGACTTTGGAAGGA+CGG | - | tig0021957:20300-20319 | Msa1395600:intron | 35.0% |
!!! | ACAAAATCCTCCTAGTTTTG+GGG | - | tig0021957:20351-20370 | Msa1395600:intron | 35.0% |
!!! | ATTGTTTTGGAGGAGGATTT+TGG | - | tig0021957:20383-20402 | Msa1395600:intron | 35.0% |
GTGAGAAATAAAGGGGAAAA+TGG | + | tig0021957:20526-20545 | None:intergenic | 35.0% | |
!!! | GTATACTTTTCGGCTTTGTT+TGG | + | tig0021957:20580-20599 | None:intergenic | 35.0% |
ATAGGAAATCGGCTAGAATT+CGG | + | tig0021957:20645-20664 | None:intergenic | 35.0% | |
!!! | ACATTTTTTGCTTTCCGACA+TGG | - | tig0021957:21062-21081 | Msa1395600:intron | 35.0% |
! | CAGACCAATGTTATTGATTG+CGG | + | tig0021957:21096-21115 | None:intergenic | 35.0% |
ATTGTGTTGGATCTTCATGT+TGG | + | tig0021957:21201-21220 | None:intergenic | 35.0% | |
TTAATGATGCCTGCAAGTTA+TGG | - | tig0021957:21255-21274 | Msa1395600:intron | 35.0% | |
TTGGAACTTTATTGCTGTAG+AGG | - | tig0021957:21290-21309 | Msa1395600:intron | 35.0% | |
GTTAAATCATTCAGCAACGA+TGG | + | tig0021957:21382-21401 | None:intergenic | 35.0% | |
! | GAATTTTCTCACGGTTATTC+AGG | - | tig0021957:21448-21467 | Msa1395600:intron | 35.0% |
! | GTTCACATTTCCTTTTCTGA+TGG | - | tig0021957:21471-21490 | Msa1395600:intron | 35.0% |
TAAAGATCCATCATGGCAAT+GGG | + | tig0021957:21544-21563 | None:intergenic | 35.0% | |
TTAAAGATCCATCATGGCAA+TGG | + | tig0021957:21545-21564 | None:intergenic | 35.0% | |
TACATCCCAACTTTATCAAG+GGG | + | tig0021957:21706-21725 | None:intergenic | 35.0% | |
CTACATCCCAACTTTATCAA+GGG | + | tig0021957:21707-21726 | None:intergenic | 35.0% | |
ACTACATCCCAACTTTATCA+AGG | + | tig0021957:21708-21727 | None:intergenic | 35.0% | |
TGCAGACTTATTGGATCTAA+AGG | - | tig0021957:21802-21821 | Msa1395600:intron | 35.0% | |
AAGTTAGGCAATCAAATACC+TGG | - | tig0021957:21852-21871 | Msa1395600:CDS | 35.0% | |
CATTATAAGCAGAATGACAG+AGG | + | tig0021957:21891-21910 | None:intergenic | 35.0% | |
TAATTCCTGCATAGTCTCAT+TGG | - | tig0021957:22126-22145 | Msa1395600:intron | 35.0% | |
ACCTATGATTGAAGAAACAC+AGG | - | tig0021957:22227-22246 | Msa1395600:intron | 35.0% | |
TCCTGTGTTTCTTCAATCAT+AGG | + | tig0021957:22231-22250 | None:intergenic | 35.0% | |
ACATTGCCTATAGCTTTCAT+TGG | - | tig0021957:22531-22550 | Msa1395600:intron | 35.0% | |
GAAAAGCCAATGAAAGCTAT+AGG | + | tig0021957:22540-22559 | None:intergenic | 35.0% | |
! | TGTGTTGTTACCGTGTTAAT+TGG | - | tig0021957:22593-22612 | Msa1395600:intron | 35.0% |
ATCTGGCCATCTATCATATA+TGG | + | tig0021957:22665-22684 | None:intergenic | 35.0% | |
ATATATGATAGATGGCCAGA+TGG | - | tig0021957:22664-22683 | Msa1395600:CDS | 35.0% | |
GAAATCTAGTAGTAACCATC+TGG | + | tig0021957:22682-22701 | None:intergenic | 35.0% | |
CTACTAGATTTCGAAGACTA+TGG | - | tig0021957:22690-22709 | Msa1395600:intron | 35.0% | |
GATTCCCTTGTCAATTTGAT+AGG | - | tig0021957:23443-23462 | Msa1395600:intron | 35.0% | |
! | TTGATAGATTTGGGACCATT+TGG | + | tig0021957:23540-23559 | None:intergenic | 35.0% |
!! | GCTTGTCGATTTGATAGATT+TGG | + | tig0021957:23550-23569 | None:intergenic | 35.0% |
GTAGTTGCCTATAAATGAAG+AGG | + | tig0021957:23623-23642 | None:intergenic | 35.0% | |
!! | TCTACTTACTAAGTTGGTCT+AGG | - | tig0021957:23667-23686 | Msa1395600:intron | 35.0% |
TGTGACTGCTAACTAATCTT+TGG | + | tig0021957:23762-23781 | None:intergenic | 35.0% | |
GAAAATGTCACATACGCAAA+AGG | + | tig0021957:23798-23817 | None:intergenic | 35.0% | |
TAGTTCATTAACGCTAGTTC+AGG | - | tig0021957:23946-23965 | Msa1395600:intron | 35.0% | |
!! | TTTAGAAGCATCAGTTTCCT+TGG | + | tig0021957:24421-24440 | None:intergenic | 35.0% |
TTCAGGAGAAATAGTTTCCT+TGG | + | tig0021957:24490-24509 | None:intergenic | 35.0% | |
!! | GGTATTTTATGCCATTTCTC+AGG | + | tig0021957:24531-24550 | None:intergenic | 35.0% |
CCACACTGGAGAAATTATAA+AGG | + | tig0021957:24777-24796 | None:intergenic | 35.0% | |
CCTTTATAATTTCTCCAGTG+TGG | - | tig0021957:24774-24793 | Msa1395600:intron | 35.0% | |
TATTAATTCTTCACCCACAC+TGG | + | tig0021957:24791-24810 | None:intergenic | 35.0% | |
!! | TTGGCCTTATTTCTGATTGA+TGG | - | tig0021957:24842-24861 | Msa1395600:intron | 35.0% |
TGCACCATCAATCAGAAATA+AGG | + | tig0021957:24849-24868 | None:intergenic | 35.0% | |
!!! | TTGCGAGCTTTGGTTTTAAT+GGG | - | tig0021957:24922-24941 | Msa1395600:CDS | 35.0% |
!! | TTTCATTAGCTTTCACTTGC+TGG | - | tig0021957:25262-25281 | Msa1395600:intron | 35.0% |
CTTGAATATGCATTTGACAG+AGG | - | tig0021957:25428-25447 | Msa1395600:intron | 35.0% | |
! | TAAAGGTGCAATTCTCATCA+AGG | + | tig0021957:25516-25535 | None:intergenic | 35.0% |
!!! | ACAGATTTTGGAACTTGGTT+TGG | - | tig0021957:25605-25624 | Msa1395600:intron | 35.0% |
!!! | CAGATTTTGGAACTTGGTTT+GGG | - | tig0021957:25606-25625 | Msa1395600:intron | 35.0% |
AGGCAAAATGGAACTTAGTT+TGG | - | tig0021957:25671-25690 | Msa1395600:CDS | 35.0% | |
GGCAAAATGGAACTTAGTTT+GGG | - | tig0021957:25672-25691 | Msa1395600:CDS | 35.0% | |
!! | GTAGTACATATCGACTTCAT+AGG | + | tig0021957:25719-25738 | None:intergenic | 35.0% |
!! | ATGTATTTGAGAAGTATCGG+TGG | + | tig0021957:25845-25864 | None:intergenic | 35.0% |
TGAAAGAGTTGCAAATATGG+AGG | - | tig0021957:26233-26252 | Msa1395600:intron | 35.0% | |
! | AAATAATAGCGTTTGCTAGC+GGG | + | tig0021957:26270-26289 | None:intergenic | 35.0% |
GTATTTAACCAAGTTGTACC+TGG | + | tig0021957:26313-26332 | None:intergenic | 35.0% | |
! | TTTCATTTTGCTCATGGGAT+TGG | - | tig0021957:26365-26384 | Msa1395600:intron | 35.0% |
CTCATGGGATTGGATTTATT+GGG | - | tig0021957:26375-26394 | Msa1395600:intron | 35.0% | |
TCATGGGATTGGATTTATTG+GGG | - | tig0021957:26376-26395 | Msa1395600:intron | 35.0% | |
TACAGCTCTTTACATGATTC+TGG | - | tig0021957:26400-26419 | Msa1395600:intron | 35.0% | |
TTCAGAATCTCAGAGTGAAC+CGG | + | tig0021957:17559-17578 | None:intergenic | 40.0% | |
! | AAAACAATCGCTGATAGTGC+AGG | - | tig0021957:17577-17596 | Msa1395600:CDS | 40.0% |
GGGAAAAACAGGGATATCTT+CGG | + | tig0021957:17605-17624 | None:intergenic | 40.0% | |
GGATTCGAGCAATGAAATGA+CGG | + | tig0021957:17635-17654 | None:intergenic | 40.0% | |
GAATCCTTTCACGATCTTAC+TGG | - | tig0021957:17649-17668 | Msa1395600:CDS | 40.0% | |
ACGATCTTACTGGATTTCCA+TGG | - | tig0021957:17659-17678 | Msa1395600:CDS | 40.0% | |
GGAGATATTGAAGGTTACCA+TGG | + | tig0021957:17679-17698 | None:intergenic | 40.0% | |
TAACTCTTTCCTGAGAAAGG+CGG | + | tig0021957:19123-19142 | None:intergenic | 40.0% | |
GAAGAGAAGAGAAAAGCAGT+TGG | - | tig0021957:19165-19184 | Msa1395600:CDS | 40.0% | |
CAGTATACAGTCTTTCTTGG+TGG | + | tig0021957:19339-19358 | None:intergenic | 40.0% | |
CTGCAGTATACAGTCTTTCT+TGG | + | tig0021957:19342-19361 | None:intergenic | 40.0% | |
CTCTGATATTCATGGGAGTA+GGG | + | tig0021957:19789-19808 | None:intergenic | 40.0% | |
ATGCCTCCTCTGATATTCAT+GGG | + | tig0021957:19796-19815 | None:intergenic | 40.0% | |
AAAAGAAAGTTTCGGTGGAG+GGG | - | tig0021957:19934-19953 | Msa1395600:intron | 40.0% | |
!! | AAAGGCCTCATTCTAAGGTT+AGG | - | tig0021957:19958-19977 | Msa1395600:intron | 40.0% |
! | AATTTTGCAAGGCAACTGGT+TGG | + | tig0021957:20080-20099 | None:intergenic | 40.0% |
GCGTAACTGAGTAAAACGAA+AGG | + | tig0021957:20135-20154 | None:intergenic | 40.0% | |
AGGATTCACATCCTTACCTT+TGG | + | tig0021957:20204-20223 | None:intergenic | 40.0% | |
GTAAGGATGTGAATCCTCTA+AGG | - | tig0021957:20207-20226 | Msa1395600:intron | 40.0% | |
!! | GCTTTGTTTGCGAGTTTAGA+GGG | - | tig0021957:20229-20248 | Msa1395600:intron | 40.0% |
! | CTTTGTTTGCGAGTTTAGAG+GGG | - | tig0021957:20230-20249 | Msa1395600:intron | 40.0% |
!! | GAGGGCTTTTGAAAATAGGA+AGG | - | tig0021957:20264-20283 | Msa1395600:intron | 40.0% |
TGAAAATAGGAAGGAGCAAG+TGG | - | tig0021957:20273-20292 | Msa1395600:intron | 40.0% | |
! | ATAGATGACTTTGGAAGGAC+GGG | - | tig0021957:20301-20320 | Msa1395600:intron | 40.0% |
! | TTTAGTTCCCCAAAACTAGG+AGG | + | tig0021957:20361-20380 | None:intergenic | 40.0% |
TTTGGGGGGTGAGAAATAAA+GGG | + | tig0021957:20534-20553 | None:intergenic | 40.0% | |
ATTTGGGGGGTGAGAAATAA+AGG | + | tig0021957:20535-20554 | None:intergenic | 40.0% | |
TATACCTAACAAAAGGGGGA+TGG | - | tig0021957:20595-20614 | Msa1395600:intron | 40.0% | |
ATACCTAACAAAAGGGGGAT+GGG | - | tig0021957:20596-20615 | Msa1395600:intron | 40.0% | |
AACATCCACACGAAAAAGCA+GGG | + | tig0021957:20833-20852 | None:intergenic | 40.0% | |
AAACATCCACACGAAAAAGC+AGG | + | tig0021957:20834-20853 | None:intergenic | 40.0% | |
TCGTGTGGATGTTTAGCATA+AGG | - | tig0021957:20840-20859 | Msa1395600:intron | 40.0% | |
TGTGGATGTTTAGCATAAGG+AGG | - | tig0021957:20843-20862 | Msa1395600:intron | 40.0% | |
!!! | ACCCTGGTTTTGATTGTGTA+AGG | - | tig0021957:20882-20901 | Msa1395600:intron | 40.0% |
GCCTTACACAATCAAAACCA+GGG | + | tig0021957:20886-20905 | None:intergenic | 40.0% | |
AGCCTTACACAATCAAAACC+AGG | + | tig0021957:20887-20906 | None:intergenic | 40.0% | |
!!! | CAGATTTTTTACAACCGCCA+CGG | - | tig0021957:20988-21007 | Msa1395600:intron | 40.0% |
! | CCAATGTTATTGATTGCGGA+CGG | + | tig0021957:21092-21111 | None:intergenic | 40.0% |
ATGTTGGATATCCCATGAAG+TGG | + | tig0021957:21185-21204 | None:intergenic | 40.0% | |
! | GTTATGGACTTGCAGCATTT+TGG | - | tig0021957:21271-21290 | Msa1395600:intron | 40.0% |
ACATGCTAATTATTGCAGGG+TGG | - | tig0021957:21400-21419 | Msa1395600:intron | 40.0% | |
! | ACATTTCCTTTTCTGATGGC+TGG | - | tig0021957:21475-21494 | Msa1395600:intron | 40.0% |
ACATCCCAACTTTATCAAGG+GGG | + | tig0021957:21705-21724 | None:intergenic | 40.0% | |
GGCTAGTGATTACTCAAGTT+AGG | - | tig0021957:21837-21856 | Msa1395600:intron | 40.0% | |
CAAAACCAATGAGACTATGC+AGG | + | tig0021957:22134-22153 | None:intergenic | 40.0% | |
!!! | TAGTCTCATTGGTTTTGCGA+AGG | - | tig0021957:22137-22156 | Msa1395600:intron | 40.0% |
!!! | AGTCTCATTGGTTTTGCGAA+GGG | - | tig0021957:22138-22157 | Msa1395600:intron | 40.0% |
!!! | CATTGGCTTTTCTATTCCTC+AGG | - | tig0021957:22548-22567 | Msa1395600:intron | 40.0% |
GCAAGATATCTGTACTCTGT+AGG | - | tig0021957:22789-22808 | Msa1395600:intron | 40.0% | |
ATAGACTCTGATAGGTTGTG+AGG | + | tig0021957:22899-22918 | None:intergenic | 40.0% | |
ATTAGGAGAGATGTTCTCTC+TGG | + | tig0021957:23109-23128 | None:intergenic | 40.0% | |
TTGATCTACCTTGACTGCAA+TGG | - | tig0021957:23303-23322 | Msa1395600:intron | 40.0% | |
ACTGCAACAATTCAGTCTAG+TGG | - | tig0021957:23354-23373 | Msa1395600:intron | 40.0% | |
GTTTCTGAACTTGCATGAGT+AGG | - | tig0021957:23421-23440 | Msa1395600:intron | 40.0% | |
CCTGTGCAACATTGTAATCT+AGG | + | tig0021957:23494-23513 | None:intergenic | 40.0% | |
CCTAGATTACAATGTTGCAC+AGG | - | tig0021957:23491-23510 | Msa1395600:intron | 40.0% | |
!! | AATGTTGCACAGGTTCTGAA+AGG | - | tig0021957:23501-23520 | Msa1395600:intron | 40.0% |
!! | ATGTTGCACAGGTTCTGAAA+GGG | - | tig0021957:23502-23521 | Msa1395600:intron | 40.0% |
!! | ATTTGGGACCATTTGGCTTT+AGG | + | tig0021957:23533-23552 | None:intergenic | 40.0% |
! | GTGACATTTTCCATTGCAGT+TGG | - | tig0021957:23807-23826 | Msa1395600:intron | 40.0% |
GCACTTTGCTCTTAGAAATC+CGG | - | tig0021957:24344-24363 | Msa1395600:intron | 40.0% | |
!! | TTCTAAAACACCGCCTTTAC+TGG | - | tig0021957:24434-24453 | Msa1395600:intron | 40.0% |
! | TCTAAAACACCGCCTTTACT+GGG | - | tig0021957:24435-24454 | Msa1395600:intron | 40.0% |
ATTTCTCAGGTGAATCCAGA+GGG | + | tig0021957:24518-24537 | None:intergenic | 40.0% | |
ACAGAGGACATGTTCTCTAT+AGG | + | tig0021957:24552-24571 | None:intergenic | 40.0% | |
ATGTTCTTATCCACTCACAG+TGG | + | tig0021957:24583-24602 | None:intergenic | 40.0% | |
!!! | CTTGCGAGCTTTGGTTTTAA+TGG | - | tig0021957:24921-24940 | Msa1395600:CDS | 40.0% |
!!! | GAGCTTTGGTTTTAATGGGA+CGG | - | tig0021957:24926-24945 | Msa1395600:CDS | 40.0% |
!!! | AGCTTTGGTTTTAATGGGAC+GGG | - | tig0021957:24927-24946 | Msa1395600:CDS | 40.0% |
CTTTGAGCGTGCAATATCAA+AGG | - | tig0021957:24990-25009 | Msa1395600:CDS | 40.0% | |
CAAACTCTTCTGGATCAGTT+GGG | + | tig0021957:25291-25310 | None:intergenic | 40.0% | |
TCAAACTCTTCTGGATCAGT+TGG | + | tig0021957:25292-25311 | None:intergenic | 40.0% | |
GGGTTTATTGCCTAACTATC+TGG | - | tig0021957:25692-25711 | Msa1395600:CDS | 40.0% | |
ATACTTTCTGGACACCTGTT+GGG | + | tig0021957:25795-25814 | None:intergenic | 40.0% | |
! | TCTTCAATTTTCTGCATGGC+AGG | - | tig0021957:26182-26201 | Msa1395600:intron | 40.0% |
! | CTTCAATTTTCTGCATGGCA+GGG | - | tig0021957:26183-26202 | Msa1395600:intron | 40.0% |
GCTCATGGGATTGGATTTAT+TGG | - | tig0021957:26374-26393 | Msa1395600:intron | 40.0% | |
!! | TTTTAATTGGGGGACAATGG+AGG | + | tig0021957:26753-26772 | None:intergenic | 40.0% |
GAAGTGAAGAAGGTCGTGAA+TGG | + | tig0021957:17372-17391 | None:intergenic | 45.0% | |
GACAGGTAGAGAAGTGAAGA+AGG | + | tig0021957:17382-17401 | None:intergenic | 45.0% | |
GAGAAGTTTGGATACGTGAC+AGG | + | tig0021957:17399-17418 | None:intergenic | 45.0% | |
AAGGATGGGGAAATGGAGAA+GGG | + | tig0021957:17426-17445 | None:intergenic | 45.0% | |
AAAGGATGGGGAAATGGAGA+AGG | + | tig0021957:17427-17446 | None:intergenic | 45.0% | |
AGAGTGAGGTGTGAAAGGAT+GGG | + | tig0021957:17440-17459 | None:intergenic | 45.0% | |
AGACCTAACGAGTCAGTATC+CGG | + | tig0021957:17529-17548 | None:intergenic | 45.0% | |
AATGAAATGACGGCACGAAC+GGG | + | tig0021957:17625-17644 | None:intergenic | 45.0% | |
CAATGAAATGACGGCACGAA+CGG | + | tig0021957:17626-17645 | None:intergenic | 45.0% | |
GTAACATAGGTAACTGTGGG+AGG | + | tig0021957:19299-19318 | None:intergenic | 45.0% | |
TGTATACTGCAGTCGTGATG+AGG | - | tig0021957:19350-19369 | Msa1395600:intron | 45.0% | |
GTATACTGCAGTCGTGATGA+GGG | - | tig0021957:19351-19370 | Msa1395600:intron | 45.0% | |
AAGCTCTGTCGAAGTTGCAA+AGG | + | tig0021957:19574-19593 | None:intergenic | 45.0% | |
CCTCTGATATTCATGGGAGT+AGG | + | tig0021957:19790-19809 | None:intergenic | 45.0% | |
CCTACTCCCATGAATATCAG+AGG | - | tig0021957:19787-19806 | Msa1395600:intron | 45.0% | |
ACTCCCATGAATATCAGAGG+AGG | - | tig0021957:19790-19809 | Msa1395600:intron | 45.0% | |
GATGCCTCCTCTGATATTCA+TGG | + | tig0021957:19797-19816 | None:intergenic | 45.0% | |
TTCAGCTTCTAACCAGCTCA+TGG | + | tig0021957:19819-19838 | None:intergenic | 45.0% | |
CACAGCCTAACCTTAGAATG+AGG | + | tig0021957:19966-19985 | None:intergenic | 45.0% | |
! | CACAGTTCTCCTGAGGTTTT+TGG | + | tig0021957:19989-20008 | None:intergenic | 45.0% |
CAAAAACCTCAGGAGAACTG+TGG | - | tig0021957:19987-20006 | Msa1395600:intron | 45.0% | |
AAAAGGTCTTGAGCTTCTGG+TGG | + | tig0021957:20040-20059 | None:intergenic | 45.0% | |
CCTAAAAGGTCTTGAGCTTC+TGG | + | tig0021957:20043-20062 | None:intergenic | 45.0% | |
! | CCAGAAGCTCAAGACCTTTT+AGG | - | tig0021957:20040-20059 | Msa1395600:intron | 45.0% |
ACTCGCAAACAAAGCCTTAG+AGG | + | tig0021957:20224-20243 | None:intergenic | 45.0% | |
!! | GGCTTTGTTTGCGAGTTTAG+AGG | - | tig0021957:20228-20247 | Msa1395600:intron | 45.0% |
TTTGCGAGTTTAGAGGGGAA+GGG | - | tig0021957:20235-20254 | Msa1395600:intron | 45.0% | |
!! | GGGTGAGGGCTTTTGAAAAT+AGG | - | tig0021957:20260-20279 | Msa1395600:intron | 45.0% |
!!! | GTTTTGGAGGAGGATTTTGG+AGG | - | tig0021957:20386-20405 | Msa1395600:intron | 45.0% |
TTGGGGGGTGAGAAATAAAG+GGG | + | tig0021957:20533-20552 | None:intergenic | 45.0% | |
! | CTTTGTTTGGGAGTTTGGTG+GGG | + | tig0021957:20567-20586 | None:intergenic | 45.0% |
!! | GCTTTGTTTGGGAGTTTGGT+GGG | + | tig0021957:20568-20587 | None:intergenic | 45.0% |
!! | TTCGGCTTTGTTTGGGAGTT+TGG | + | tig0021957:20572-20591 | None:intergenic | 45.0% |
TACCTAACAAAAGGGGGATG+GGG | - | tig0021957:20597-20616 | Msa1395600:intron | 45.0% | |
TAGCATAAGGAGGATGTCAC+TGG | - | tig0021957:20853-20872 | Msa1395600:intron | 45.0% | |
ATAAGGAGGATGTCACTGGA+TGG | - | tig0021957:20857-20876 | Msa1395600:intron | 45.0% | |
TAAGCCGCCATAAAACGCTA+TGG | + | tig0021957:21037-21056 | None:intergenic | 45.0% | |
CCGTCCGCAATCAATAACAT+TGG | - | tig0021957:21089-21108 | Msa1395600:intron | 45.0% | |
GCAGGCATCATTAAAGCTCA+TGG | + | tig0021957:21249-21268 | None:intergenic | 45.0% | |
GATGGGTGTCTGTGTGAATA+TGG | + | tig0021957:21364-21383 | None:intergenic | 45.0% | |
TATTGCAGGGTGGTGCTTTA+TGG | - | tig0021957:21410-21429 | Msa1395600:intron | 45.0% | |
TGAAGACCAGCCATCAGAAA+AGG | + | tig0021957:21484-21503 | None:intergenic | 45.0% | |
AGTCTATCCCATTGCCATGA+TGG | - | tig0021957:21534-21553 | Msa1395600:intron | 45.0% | |
! | TGGGGGTGCAAAGTAACAAA+AGG | + | tig0021957:21582-21601 | None:intergenic | 45.0% |
GCAACCCCCTTGATAAAGTT+GGG | - | tig0021957:21698-21717 | Msa1395600:intron | 45.0% | |
!!! | GTCTGCAAGCTATTTTGGCT+CGG | + | tig0021957:21789-21808 | None:intergenic | 45.0% |
! | TGTTGTTGACTAGCTACTGG+TGG | + | tig0021957:21972-21991 | None:intergenic | 45.0% |
! | CTCTGTTGTTGACTAGCTAC+TGG | + | tig0021957:21975-21994 | None:intergenic | 45.0% |
GCAGTACTACAAGCGATACT+TGG | - | tig0021957:22500-22519 | Msa1395600:intron | 45.0% | |
AGAAGAAAGTGGGGCCATAT+GGG | + | tig0021957:23239-23258 | None:intergenic | 45.0% | |
TAGAAGAAAGTGGGGCCATA+TGG | + | tig0021957:23240-23259 | None:intergenic | 45.0% | |
TCTACCTTGACTGCAATGGT+TGG | - | tig0021957:23307-23326 | Msa1395600:intron | 45.0% | |
TCAACCAACCATTGCAGTCA+AGG | + | tig0021957:23314-23333 | None:intergenic | 45.0% | |
!! | TGTTGCACAGGTTCTGAAAG+GGG | - | tig0021957:23503-23522 | Msa1395600:intron | 45.0% |
AAAGCAACTGCCAACTGCAA+TGG | + | tig0021957:23820-23839 | None:intergenic | 45.0% | |
CAGATTACGGCAAGAAGAGA+TGG | + | tig0021957:23862-23881 | None:intergenic | 45.0% | |
CAGTAACCCCAACTTTGCAA+GGG | + | tig0021957:24373-24392 | None:intergenic | 45.0% | |
TCGTCAAATAGCAGCTTCCA+AGG | - | tig0021957:24401-24420 | Msa1395600:intron | 45.0% | |
CTAAAACACCGCCTTTACTG+GGG | - | tig0021957:24436-24455 | Msa1395600:intron | 45.0% | |
TAAAACACCGCCTTTACTGG+GGG | - | tig0021957:24437-24456 | Msa1395600:intron | 45.0% | |
TTGTCTTGTACCCCCAGTAA+AGG | + | tig0021957:24450-24469 | None:intergenic | 45.0% | |
TTCTCCTGAAAAGAACCCTC+TGG | - | tig0021957:24500-24519 | Msa1395600:intron | 45.0% | |
! | GAATCCAGAGGGTTCTTTTC+AGG | + | tig0021957:24507-24526 | None:intergenic | 45.0% |
CATTTCTCAGGTGAATCCAG+AGG | + | tig0021957:24519-24538 | None:intergenic | 45.0% | |
CTCTGGATTCACCTGAGAAA+TGG | - | tig0021957:24517-24536 | Msa1395600:intron | 45.0% | |
CCAAAGCTCGCAAGTATTCA+GGG | + | tig0021957:24915-24934 | None:intergenic | 45.0% | |
ACCAAAGCTCGCAAGTATTC+AGG | + | tig0021957:24916-24935 | None:intergenic | 45.0% | |
TATAGCCAACCCCACTTAGT+GGG | - | tig0021957:25067-25086 | Msa1395600:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0021957:25079-25098 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0021957:25080-25099 | None:intergenic | 45.0% |
GCTTGGTTGTTGTGTGTTGT+TGG | - | tig0021957:25095-25114 | Msa1395600:intron | 45.0% | |
ATTCTTTCATCCCAATGGGC+TGG | - | tig0021957:25319-25338 | Msa1395600:intron | 45.0% | |
AAAGGCAATACCAGCCCATT+GGG | + | tig0021957:25332-25351 | None:intergenic | 45.0% | |
TGGTATTGCCTTTGAACGAC+AGG | - | tig0021957:25339-25358 | Msa1395600:intron | 45.0% | |
TCACTTCACCTGTCGTTCAA+AGG | + | tig0021957:25350-25369 | None:intergenic | 45.0% | |
CTTCATAGGGCCAGATAGTT+AGG | + | tig0021957:25705-25724 | None:intergenic | 45.0% | |
GATACTTTCTGGACACCTGT+TGG | + | tig0021957:25796-25815 | None:intergenic | 45.0% | |
CTAGTGATCTTGCCCAAAGT+AGG | - | tig0021957:26521-26540 | Msa1395600:intron | 45.0% | |
TCAGAGGTCTCTCCTACTTT+GGG | + | tig0021957:26536-26555 | None:intergenic | 45.0% | |
ATCAGAGGTCTCTCCTACTT+TGG | + | tig0021957:26537-26556 | None:intergenic | 45.0% | |
!! | ATATTAATAGTTATTAATTT+AGG | - | tig0021957:18544-18563 | Msa1395600:intron | 5.0% |
!! | TATATTAAAAAGTAAATTAT+AGG | + | tig0021957:22865-22884 | None:intergenic | 5.0% |
GTGAAGAAGGTCGTGAATGG+CGG | + | tig0021957:17369-17388 | None:intergenic | 50.0% | |
GAGAAGGGGGATGAGAAGTT+TGG | + | tig0021957:17411-17430 | None:intergenic | 50.0% | |
AGGATGGGGAAATGGAGAAG+GGG | + | tig0021957:17425-17444 | None:intergenic | 50.0% | |
GGTGTGAAAGGATGGGGAAA+TGG | + | tig0021957:17433-17452 | None:intergenic | 50.0% | |
GAGTGAGGTGTGAAAGGATG+GGG | + | tig0021957:17439-17458 | None:intergenic | 50.0% | |
GAGAGTGAGGTGTGAAAGGA+TGG | + | tig0021957:17441-17460 | None:intergenic | 50.0% | |
GTAGGAGAGTGAGGTGTGAA+AGG | + | tig0021957:17445-17464 | None:intergenic | 50.0% | |
AAAGCAGAGGTAGGAGAGTG+AGG | + | tig0021957:17454-17473 | None:intergenic | 50.0% | |
TTCGTTGTTGGAAGAGCCAG+TGG | + | tig0021957:17506-17525 | None:intergenic | 50.0% | |
TGGCTCTTCCAACAACGAAC+CGG | - | tig0021957:17507-17526 | Msa1395600:three_prime_UTR | 50.0% | |
! | GTCAGTATCCGGTTCGTTGT+TGG | + | tig0021957:17518-17537 | None:intergenic | 50.0% |
!! | GAACCGGATACTGACTCGTT+AGG | - | tig0021957:17523-17542 | Msa1395600:three_prime_UTR | 50.0% |
TCTTTCCTGAGAAAGGCGGT+GGG | + | tig0021957:19119-19138 | None:intergenic | 50.0% | |
AAGTTTCGGTGGAGGGGAAA+AGG | - | tig0021957:19940-19959 | Msa1395600:intron | 50.0% | |
GGGGAAAAGGCCTCATTCTA+AGG | - | tig0021957:19953-19972 | Msa1395600:intron | 50.0% | |
TAGGCTGTGCCAAAAACCTC+AGG | - | tig0021957:19977-19996 | Msa1395600:intron | 50.0% | |
GTAAGACCACAGTTCTCCTG+AGG | + | tig0021957:19996-20015 | None:intergenic | 50.0% | |
GTTTGCGAGTTTAGAGGGGA+AGG | - | tig0021957:20234-20253 | Msa1395600:intron | 50.0% | |
GAGTTTAGAGGGGAAGGGAT+GGG | - | tig0021957:20240-20259 | Msa1395600:intron | 50.0% | |
! | ACTTTGGAAGGACGGGTTTG+AGG | - | tig0021957:20308-20327 | Msa1395600:intron | 50.0% |
! | CTTTGGAAGGACGGGTTTGA+GGG | - | tig0021957:20309-20328 | Msa1395600:intron | 50.0% |
! | TTTGGAAGGACGGGTTTGAG+GGG | - | tig0021957:20310-20329 | Msa1395600:intron | 50.0% |
!! | GGCTTTGTTTGGGAGTTTGG+TGG | + | tig0021957:20569-20588 | None:intergenic | 50.0% |
ACACGAAAAAGCAGGGAACC+TGG | + | tig0021957:20826-20845 | None:intergenic | 50.0% | |
!!! | AGGTTCCCTGCTTTTTCGTG+TGG | - | tig0021957:20825-20844 | Msa1395600:intron | 50.0% |
CATCCTTCACAAATTGGCCG+TGG | + | tig0021957:21008-21027 | None:intergenic | 50.0% | |
CACGGCCAATTTGTGAAGGA+TGG | - | tig0021957:21006-21025 | Msa1395600:intron | 50.0% | |
GGCCAATTTGTGAAGGATGG+CGG | - | tig0021957:21009-21028 | Msa1395600:intron | 50.0% | |
! | GCTGCAAGTCCATAACTTGC+AGG | + | tig0021957:21267-21286 | None:intergenic | 50.0% |
CTGTAGAGGCTGTATCAGTG+TGG | - | tig0021957:21304-21323 | Msa1395600:intron | 50.0% | |
GGCAACCCCCTTGATAAAGT+TGG | - | tig0021957:21697-21716 | Msa1395600:intron | 50.0% | |
AGAGGCAGTAAGCAAACACC+AGG | + | tig0021957:21873-21892 | None:intergenic | 50.0% | |
!! | CTGGTAGGAGCTTTAGCTCT+GGG | + | tig0021957:23090-23109 | None:intergenic | 50.0% |
! | TCTGGTAGGAGCTTTAGCTC+TGG | + | tig0021957:23091-23110 | None:intergenic | 50.0% |
GGAGAGATGTTCTCTCTGGT+AGG | + | tig0021957:23105-23124 | None:intergenic | 50.0% | |
! | CCATATGGGAGAGCATGAGT+TGG | + | tig0021957:23225-23244 | None:intergenic | 50.0% |
CCAACTCATGCTCTCCCATA+TGG | - | tig0021957:23222-23241 | Msa1395600:intron | 50.0% | |
GCGATCACAACCTCTACCTT+TGG | + | tig0021957:23400-23419 | None:intergenic | 50.0% | |
!! | TGGGACCATTTGGCTTTAGG+AGG | + | tig0021957:23530-23549 | None:intergenic | 50.0% |
TGTGTGTGTGTGTGAGAGAG+GGG | + | tig0021957:23590-23609 | None:intergenic | 50.0% | |
GTGTGTGTGTGTGTGAGAGA+GGG | + | tig0021957:23591-23610 | None:intergenic | 50.0% | |
TGTGTGTGTGTGTGTGAGAG+AGG | + | tig0021957:23592-23611 | None:intergenic | 50.0% | |
CCAGTAACCCCAACTTTGCA+AGG | + | tig0021957:24374-24393 | None:intergenic | 50.0% | |
CCTTGCAAAGTTGGGGTTAC+TGG | - | tig0021957:24371-24390 | Msa1395600:intron | 50.0% | |
TCTTGTACCCCCAGTAAAGG+CGG | + | tig0021957:24447-24466 | None:intergenic | 50.0% | |
TAGCACAACAGCAGCTACCA+AGG | - | tig0021957:24470-24489 | Msa1395600:intron | 50.0% | |
CACAGTGGTCAGTTCTACAG+AGG | + | tig0021957:24568-24587 | None:intergenic | 50.0% | |
GTAGAACTGACCACTGTGAG+TGG | - | tig0021957:24570-24589 | Msa1395600:intron | 50.0% | |
CCCTGAATACTTGCGAGCTT+TGG | - | tig0021957:24912-24931 | Msa1395600:CDS | 50.0% | |
GTATAGCCAACCCCACTTAG+TGG | - | tig0021957:25066-25085 | Msa1395600:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+TGG | + | tig0021957:25075-25094 | None:intergenic | 50.0% | |
CAACCCCACTTAGTGGGATA+AGG | - | tig0021957:25073-25092 | Msa1395600:intron | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0021957:25081-25100 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | - | tig0021957:25078-25097 | Msa1395600:intron | 50.0% | |
ACTCTTCTGGATCAGTTGGG+AGG | + | tig0021957:25288-25307 | None:intergenic | 50.0% | |
CAAAGGCAATACCAGCCCAT+TGG | + | tig0021957:25333-25352 | None:intergenic | 50.0% | |
CCTGTTGGGATCAGACACAT+CGG | + | tig0021957:25781-25800 | None:intergenic | 50.0% | |
TTCTGCATGGCAGGGAAAGA+AGG | - | tig0021957:26191-26210 | Msa1395600:intron | 50.0% | |
! | AGGTCGTGAATGGCGGAGAA+GGG | + | tig0021957:17362-17381 | None:intergenic | 55.0% |
! | AAGGTCGTGAATGGCGGAGA+AGG | + | tig0021957:17363-17382 | None:intergenic | 55.0% |
GGATGGGGAAATGGAGAAGG+GGG | + | tig0021957:17424-17443 | None:intergenic | 55.0% | |
GCGTCGAGAAAAGCAGAGGT+AGG | + | tig0021957:17463-17482 | None:intergenic | 55.0% | |
GAACGCGTCGAGAAAAGCAG+AGG | + | tig0021957:17467-17486 | None:intergenic | 55.0% | |
! | CAGTGGAGAAAGCACGTGTG+TGG | + | tig0021957:17489-17508 | None:intergenic | 55.0% |
CACACACGTGCTTTCTCCAC+TGG | - | tig0021957:17487-17506 | Msa1395600:three_prime_UTR | 55.0% | |
CGGCACGAACGGGAAAAACA+GGG | + | tig0021957:17615-17634 | None:intergenic | 55.0% | |
ACGGCACGAACGGGAAAAAC+AGG | + | tig0021957:17616-17635 | None:intergenic | 55.0% | |
!! | GGGGGCACTTTAAGAAGCGA+AGG | + | tig0021957:19090-19109 | None:intergenic | 55.0% |
AGAAAGGCGGTGGGAATGGA+GGG | + | tig0021957:19110-19129 | None:intergenic | 55.0% | |
CTCTTTCCTGAGAAAGGCGG+TGG | + | tig0021957:19120-19139 | None:intergenic | 55.0% | |
TTGGATGCCCTTCATACGCG+TGG | - | tig0021957:19184-19203 | Msa1395600:CDS | 55.0% | |
ACAGAGGCCACGCGTATGAA+GGG | + | tig0021957:19194-19213 | None:intergenic | 55.0% | |
AACAGAGGCCACGCGTATGA+AGG | + | tig0021957:19195-19214 | None:intergenic | 55.0% | |
CGAGTTTAGAGGGGAAGGGA+TGG | - | tig0021957:20239-20258 | Msa1395600:intron | 55.0% | |
! | TTTGGGAGTTTGGTGGGGAG+GGG | + | tig0021957:20562-20581 | None:intergenic | 55.0% |
! | GTTTGGGAGTTTGGTGGGGA+GGG | + | tig0021957:20563-20582 | None:intergenic | 55.0% |
! | TGTTTGGGAGTTTGGTGGGG+AGG | + | tig0021957:20564-20583 | None:intergenic | 55.0% |
! | GTCCCCATCCCCCTTTTGTT+AGG | + | tig0021957:20602-20621 | None:intergenic | 55.0% |
ATGTCACTGGATGGTCACCC+TGG | - | tig0021957:20866-20885 | Msa1395600:intron | 55.0% | |
TATCAGCTATGGCCGCATCC+TGG | - | tig0021957:20953-20972 | Msa1395600:intron | 55.0% | |
CCTTCACAAATTGGCCGTGG+CGG | + | tig0021957:21005-21024 | None:intergenic | 55.0% | |
CGCCGCCATCCTTCACAAAT+TGG | + | tig0021957:21014-21033 | None:intergenic | 55.0% | |
! | GGCGCCATAGCGTTTTATGG+CGG | - | tig0021957:21030-21049 | Msa1395600:intron | 55.0% |
TCCATGCCCATGTGCGGTAA+AGG | - | tig0021957:21604-21623 | Msa1395600:intron | 55.0% | |
GTCGTGCCTTTACCGCACAT+GGG | + | tig0021957:21613-21632 | None:intergenic | 55.0% | |
AGTCGTGCCTTTACCGCACA+TGG | + | tig0021957:21614-21633 | None:intergenic | 55.0% | |
! | TCTGTAGGCACTGCTGCAGT+GGG | - | tig0021957:22804-22823 | Msa1395600:intron | 55.0% |
CAGTGGGGAATGGGGATGTA+TGG | - | tig0021957:22820-22839 | Msa1395600:intron | 55.0% | |
GGGGACCTCCTAAAGCCAAA+TGG | - | tig0021957:23522-23541 | Msa1395600:intron | 55.0% | |
TGTGTGTGTGTGAGAGAGGG+GGG | + | tig0021957:23588-23607 | None:intergenic | 55.0% | |
GTGTGTGTGTGTGAGAGAGG+GGG | + | tig0021957:23589-23608 | None:intergenic | 55.0% | |
TGCAGGGGAGCCAACTCTAT+TGG | - | tig0021957:23915-23934 | Msa1395600:intron | 55.0% | |
CCGATGTGTCTGATCCCAAC+AGG | - | tig0021957:25778-25797 | Msa1395600:intron | 55.0% | |
! | CGTTTGCTAGCGGGATCTTC+AGG | + | tig0021957:26261-26280 | None:intergenic | 55.0% |
!! | ATGGTTTGCTGCTGCTTGCC+AGG | - | tig0021957:26292-26311 | Msa1395600:intron | 55.0% |
GCTGCTTGCCAGGTACAACT+TGG | - | tig0021957:26302-26321 | Msa1395600:intron | 55.0% | |
! | GTGAATGGCGGAGAAGGGAG+CGG | + | tig0021957:17357-17376 | None:intergenic | 60.0% |
! | CTCGTTAGGTCTCGACTCGC+CGG | - | tig0021957:17537-17556 | Msa1395600:three_prime_UTR | 60.0% |
AAAGGCGGTGGGAATGGAGG+GGG | + | tig0021957:19108-19127 | None:intergenic | 60.0% | |
GAAAGGCGGTGGGAATGGAG+GGG | + | tig0021957:19109-19128 | None:intergenic | 60.0% | |
GAGAAAGGCGGTGGGAATGG+AGG | + | tig0021957:19111-19130 | None:intergenic | 60.0% | |
CCTGAGAAAGGCGGTGGGAA+TGG | + | tig0021957:19114-19133 | None:intergenic | 60.0% | |
CCATTCCCACCGCCTTTCTC+AGG | - | tig0021957:19111-19130 | Msa1395600:intron | 60.0% | |
!! | CAGAGGAGGCATCCATGAGC+TGG | - | tig0021957:19804-19823 | Msa1395600:intron | 60.0% |
TAGAGGGGAAGGGATGGGTG+AGG | - | tig0021957:20245-20264 | Msa1395600:intron | 60.0% | |
AGAGGGGAAGGGATGGGTGA+GGG | - | tig0021957:20246-20265 | Msa1395600:intron | 60.0% | |
AATCTGCCACCGCATCTGCC+AGG | + | tig0021957:20974-20993 | None:intergenic | 60.0% | |
CCGCCACGGCCAATTTGTGA+AGG | - | tig0021957:21002-21021 | Msa1395600:intron | 60.0% | |
! | GGCGGCGCCATAGCGTTTTA+TGG | - | tig0021957:21027-21046 | Msa1395600:intron | 60.0% |
GCACATGGGCATGGAGATGG+GGG | + | tig0021957:21599-21618 | None:intergenic | 60.0% | |
CGCACATGGGCATGGAGATG+GGG | + | tig0021957:21600-21619 | None:intergenic | 60.0% | |
CCGCACATGGGCATGGAGAT+GGG | + | tig0021957:21601-21620 | None:intergenic | 60.0% | |
CCCATCTCCATGCCCATGTG+CGG | - | tig0021957:21598-21617 | Msa1395600:CDS | 60.0% | |
ACCGCACATGGGCATGGAGA+TGG | + | tig0021957:21602-21621 | None:intergenic | 60.0% | |
GCCTTTACCGCACATGGGCA+TGG | + | tig0021957:21608-21627 | None:intergenic | 60.0% | |
! | CTCTGTAGGCACTGCTGCAG+TGG | - | tig0021957:22803-22822 | Msa1395600:intron | 60.0% |
! | CTGTAGGCACTGCTGCAGTG+GGG | - | tig0021957:22805-22824 | Msa1395600:intron | 60.0% |
GCACTGCTGCAGTGGGGAAT+GGG | - | tig0021957:22811-22830 | Msa1395600:intron | 60.0% | |
CACTGCTGCAGTGGGGAATG+GGG | - | tig0021957:22812-22831 | Msa1395600:intron | 60.0% | |
TGTGTGTGTGAGAGAGGGGG+GGG | + | tig0021957:23586-23605 | None:intergenic | 60.0% | |
GTGTGTGTGTGAGAGAGGGG+GGG | + | tig0021957:23587-23606 | None:intergenic | 60.0% | |
TCCGGCTGCCCTTGCAAAGT+TGG | - | tig0021957:24362-24381 | Msa1395600:intron | 60.0% | |
CCCAACTTTGCAAGGGCAGC+CGG | + | tig0021957:24366-24385 | None:intergenic | 60.0% | |
CCGGCTGCCCTTGCAAAGTT+GGG | - | tig0021957:24363-24382 | Msa1395600:intron | 60.0% | |
CGGCTGCCCTTGCAAAGTTG+GGG | - | tig0021957:24364-24383 | Msa1395600:intron | 60.0% | |
TGGGGAGGGGAGGGATTTGG+GGG | + | tig0021957:20549-20568 | None:intergenic | 65.0% | |
GTGGGGAGGGGAGGGATTTG+GGG | + | tig0021957:20550-20569 | None:intergenic | 65.0% | |
GGTGGGGAGGGGAGGGATTT+GGG | + | tig0021957:20551-20570 | None:intergenic | 65.0% | |
TGGTGGGGAGGGGAGGGATT+TGG | + | tig0021957:20552-20571 | None:intergenic | 65.0% | |
! | GGAGTTTGGTGGGGAGGGGA+GGG | + | tig0021957:20558-20577 | None:intergenic | 65.0% |
TGGCCGCATCCTGGCAGATG+CGG | - | tig0021957:20962-20981 | Msa1395600:intron | 65.0% | |
CCACCGCATCTGCCAGGATG+CGG | + | tig0021957:20968-20987 | None:intergenic | 65.0% | |
TTGCGGACGGCGCACCATGT+CGG | + | tig0021957:21079-21098 | None:intergenic | 65.0% | |
GGCACTGCTGCAGTGGGGAA+TGG | - | tig0021957:22810-22829 | Msa1395600:intron | 65.0% | |
TGTGTGTGAGAGAGGGGGGG+GGG | + | tig0021957:23584-23603 | None:intergenic | 65.0% | |
GTGTGTGTGAGAGAGGGGGG+GGG | + | tig0021957:23585-23604 | None:intergenic | 65.0% | |
GGGGAGGGGAGGGATTTGGG+GGG | + | tig0021957:20548-20567 | None:intergenic | 70.0% | |
! | GGGAGTTTGGTGGGGAGGGG+AGG | + | tig0021957:20559-20578 | None:intergenic | 70.0% |
CCGCATCCTGGCAGATGCGG+TGG | - | tig0021957:20965-20984 | Msa1395600:intron | 70.0% | |
TGTGTGAGAGAGGGGGGGGG+GGG | + | tig0021957:23582-23601 | None:intergenic | 70.0% | |
GTGTGTGAGAGAGGGGGGGG+GGG | + | tig0021957:23583-23602 | None:intergenic | 70.0% | |
TGTGAGAGAGGGGGGGGGGG+GGG | + | tig0021957:23580-23599 | None:intergenic | 75.0% | |
GTGTGAGAGAGGGGGGGGGG+GGG | + | tig0021957:23581-23600 | None:intergenic | 75.0% | |
!!! | AAGGGAGCGGAGCGCCGCCG+TGG | + | tig0021957:17344-17363 | None:intergenic | 80.0% |
! | GTGAGAGAGGGGGGGGGGGG+GGG | + | tig0021957:23579-23598 | None:intergenic | 80.0% |
! | GAGAGGGGGGGGGGGGGGGA+GGG | + | tig0021957:23575-23594 | None:intergenic | 85.0% |
! | AGAGAGGGGGGGGGGGGGGG+AGG | + | tig0021957:23576-23595 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0021957 | gene | 17334 | 26790 | 17334 | ID=Msa1395600;Name=Msa1395600 |
tig0021957 | mRNA | 17334 | 26790 | 17334 | ID=Msa1395600-mRNA-1;Parent=Msa1395600;Name=Msa1395600-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.63|0.83|1|0.81|0.91|12|235|462 |
tig0021957 | exon | 17334 | 17719 | 17334 | ID=Msa1395600-mRNA-1:exon:15010;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 17811 | 17920 | 17811 | ID=Msa1395600-mRNA-1:exon:15009;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 18764 | 18853 | 18764 | ID=Msa1395600-mRNA-1:exon:15008;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 19158 | 19230 | 19158 | ID=Msa1395600-mRNA-1:exon:15007;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 19386 | 19441 | 19386 | ID=Msa1395600-mRNA-1:exon:15006;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 19540 | 19779 | 19540 | ID=Msa1395600-mRNA-1:exon:15005;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 21555 | 21620 | 21555 | ID=Msa1395600-mRNA-1:exon:15004;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 21852 | 21911 | 21852 | ID=Msa1395600-mRNA-1:exon:15003;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 22605 | 22706 | 22605 | ID=Msa1395600-mRNA-1:exon:15002;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 24894 | 25021 | 24894 | ID=Msa1395600-mRNA-1:exon:15001;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 25658 | 25764 | 25658 | ID=Msa1395600-mRNA-1:exon:15000;Parent=Msa1395600-mRNA-1 |
tig0021957 | exon | 26585 | 26790 | 26585 | ID=Msa1395600-mRNA-1:exon:14999;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 26585 | 26790 | 26585 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 25658 | 25764 | 25658 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 24894 | 25021 | 24894 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 22605 | 22706 | 22605 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 21852 | 21911 | 21852 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 21555 | 21620 | 21555 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 19540 | 19779 | 19540 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 19386 | 19441 | 19386 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 19158 | 19230 | 19158 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 18764 | 18853 | 18764 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 17811 | 17920 | 17811 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | CDS | 17569 | 17719 | 17569 | ID=Msa1395600-mRNA-1:cds;Parent=Msa1395600-mRNA-1 |
tig0021957 | three_prime_UTR | 17334 | 17568 | 17334 | ID=Msa1395600-mRNA-1:three_prime_utr;Parent=Msa1395600-mRNA-1 |
Gene Sequence |
Protein sequence |