Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190890 | sp|Q8RWJ7|SHH2_ARATH | 69.637 | 303 | 76 | 5 | 1 | 287 | 1 | 303 | 4.71e-151 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190890 | G7LDQ2 | 98.933 | 375 | 4 | 0 | 1 | 375 | 1 | 375 | 0.0 | 777 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1190890 | TF | HB-other |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1190890 | 0.822058 | 2.902620e-53 | -8.615850e-47 |
| Msa0000550 | Msa1190890 | 0.805209 | 1.491083e-49 | -8.615850e-47 |
| Msa0013050 | Msa1190890 | 0.850076 | 2.145795e-60 | -8.615850e-47 |
| Msa0023830 | Msa1190890 | 0.816040 | 6.787639e-52 | -8.615850e-47 |
| Msa0024210 | Msa1190890 | 0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0032610 | Msa1190890 | -0.812577 | 3.953975e-51 | -8.615850e-47 |
| Msa0032840 | Msa1190890 | 0.803144 | 4.009843e-49 | -8.615850e-47 |
| Msa0033980 | Msa1190890 | -0.800438 | 1.441149e-48 | -8.615850e-47 |
| Msa0044540 | Msa1190890 | 0.806471 | 8.096690e-50 | -8.615850e-47 |
| Msa0063350 | Msa1190890 | 0.812220 | 4.730580e-51 | -8.615850e-47 |
| Msa0069260 | Msa1190890 | -0.801331 | 9.471110e-49 | -8.615850e-47 |
| Msa0069310 | Msa1190890 | -0.825709 | 4.044096e-54 | -8.615850e-47 |
| Msa0074950 | Msa1190890 | 0.821336 | 4.262536e-53 | -8.615850e-47 |
| Msa0081930 | Msa1190890 | -0.802894 | 4.517721e-49 | -8.615850e-47 |
| Msa0085360 | Msa1190890 | 0.803808 | 2.921090e-49 | -8.615850e-47 |
| Msa0090030 | Msa1190890 | -0.816896 | 4.364933e-52 | -8.615850e-47 |
| Msa0092990 | Msa1190890 | -0.802788 | 4.751085e-49 | -8.615850e-47 |
| Msa0097990 | Msa1190890 | -0.819221 | 1.301220e-52 | -8.615850e-47 |
| Msa0099510 | Msa1190890 | -0.841468 | 4.666190e-58 | -8.615850e-47 |
| Msa0112560 | Msa1190890 | -0.806423 | 8.284280e-50 | -8.615850e-47 |
| Msa0607340 | Msa1190890 | 0.822593 | 2.180352e-53 | -8.615850e-47 |
| Msa0619070 | Msa1190890 | -0.803288 | 3.744088e-49 | -8.615850e-47 |
| Msa0638320 | Msa1190890 | -0.803818 | 2.906990e-49 | -8.615850e-47 |
| Msa0647450 | Msa1190890 | 0.832729 | 8.005579e-56 | -8.615850e-47 |
| Msa0661190 | Msa1190890 | 0.833613 | 4.822374e-56 | -8.615850e-47 |
| Msa0662290 | Msa1190890 | 0.812029 | 5.207909e-51 | -8.615850e-47 |
| Msa0669850 | Msa1190890 | -0.822242 | 2.630773e-53 | -8.615850e-47 |
| Msa0677270 | Msa1190890 | -0.807025 | 6.183404e-50 | -8.615850e-47 |
| Msa0684180 | Msa1190890 | 0.820389 | 7.037174e-53 | -8.615850e-47 |
| Msa0735620 | Msa1190890 | 0.823808 | 1.134530e-53 | -8.615850e-47 |
| Msa0743260 | Msa1190890 | -0.819064 | 1.413402e-52 | -8.615850e-47 |
| Msa0754720 | Msa1190890 | 0.806636 | 7.472949e-50 | -8.615850e-47 |
| Msa0756630 | Msa1190890 | 0.824802 | 6.625584e-54 | -8.615850e-47 |
| Msa0777570 | Msa1190890 | 0.810910 | 9.111990e-51 | -8.615850e-47 |
| Msa0790390 | Msa1190890 | 0.806605 | 7.583557e-50 | -8.615850e-47 |
| Msa0791820 | Msa1190890 | -0.849701 | 2.730989e-60 | -8.615850e-47 |
| Msa0799010 | Msa1190890 | 0.805823 | 1.108125e-49 | -8.615850e-47 |
| Msa0814630 | Msa1190890 | 0.804056 | 2.594056e-49 | -8.615850e-47 |
| Msa0831870 | Msa1190890 | -0.811540 | 6.652986e-51 | -8.615850e-47 |
| Msa0128020 | Msa1190890 | -0.802904 | 4.496911e-49 | -8.615850e-47 |
| Msa0140510 | Msa1190890 | 0.819370 | 1.203635e-52 | -8.615850e-47 |
| Msa0140520 | Msa1190890 | 0.834298 | 3.249246e-56 | -8.615850e-47 |
| Msa0148120 | Msa1190890 | -0.844843 | 5.882012e-59 | -8.615850e-47 |
| Msa0156650 | Msa1190890 | 0.848287 | 6.747401e-60 | -8.615850e-47 |
| Msa0162770 | Msa1190890 | 0.861722 | 8.403522e-64 | -8.615850e-47 |
| Msa0168640 | Msa1190890 | 0.800248 | 1.575760e-48 | -8.615850e-47 |
| Msa0196020 | Msa1190890 | 0.805777 | 1.133389e-49 | -8.615850e-47 |
| Msa0219250 | Msa1190890 | 0.800018 | 1.754302e-48 | -8.615850e-47 |
| Msa0223380 | Msa1190890 | -0.806061 | 9.875003e-50 | -8.615850e-47 |
| Msa0227400 | Msa1190890 | -0.808073 | 3.705163e-50 | -8.615850e-47 |
| Msa0229490 | Msa1190890 | 0.850845 | 1.304674e-60 | -8.615850e-47 |
| Msa0233350 | Msa1190890 | -0.809978 | 1.448236e-50 | -8.615850e-47 |
| Msa0377530 | Msa1190890 | -0.811274 | 7.598413e-51 | -8.615850e-47 |
| Msa0381590 | Msa1190890 | 0.809187 | 2.141606e-50 | -8.615850e-47 |
| Msa0381620 | Msa1190890 | 0.805758 | 1.143792e-49 | -8.615850e-47 |
| Msa0408790 | Msa1190890 | 0.806502 | 7.973811e-50 | -8.615850e-47 |
| Msa0414950 | Msa1190890 | 0.852030 | 6.029961e-61 | -8.615850e-47 |
| Msa0419640 | Msa1190890 | 0.813879 | 2.047230e-51 | -8.615850e-47 |
| Msa0421780 | Msa1190890 | 0.826276 | 2.965540e-54 | -8.615850e-47 |
| Msa0436280 | Msa1190890 | 0.840881 | 6.654657e-58 | -8.615850e-47 |
| Msa0459770 | Msa1190890 | 0.810513 | 1.110213e-50 | -8.615850e-47 |
| Msa0464900 | Msa1190890 | -0.810670 | 1.027207e-50 | -8.615850e-47 |
| Msa0467900 | Msa1190890 | 0.838177 | 3.356628e-57 | -8.615850e-47 |
| Msa0467960 | Msa1190890 | 0.817817 | 2.708521e-52 | -8.615850e-47 |
| Msa0473240 | Msa1190890 | -0.804616 | 1.982972e-49 | -8.615850e-47 |
| Msa0477130 | Msa1190890 | 0.800822 | 1.203459e-48 | -8.615850e-47 |
| Msa0999050 | Msa1190890 | 0.810351 | 1.203448e-50 | -8.615850e-47 |
| Msa1002600 | Msa1190890 | 0.807522 | 4.850827e-50 | -8.615850e-47 |
| Msa1033410 | Msa1190890 | 0.816419 | 5.584300e-52 | -8.615850e-47 |
| Msa1037700 | Msa1190890 | 0.812617 | 3.874741e-51 | -8.615850e-47 |
| Msa1039880 | Msa1190890 | -0.817253 | 3.629804e-52 | -8.615850e-47 |
| Msa1040400 | Msa1190890 | -0.819789 | 9.657791e-53 | -8.615850e-47 |
| Msa1069660 | Msa1190890 | 0.849271 | 3.599846e-60 | -8.615850e-47 |
| Msa1072460 | Msa1190890 | 0.823623 | 1.253645e-53 | -8.615850e-47 |
| Msa1073070 | Msa1190890 | 0.821739 | 3.440057e-53 | -8.615850e-47 |
| Msa1075220 | Msa1190890 | 0.803447 | 3.471654e-49 | -8.615850e-47 |
| Msa1076810 | Msa1190890 | 0.800433 | 1.444760e-48 | -8.615850e-47 |
| Msa1079370 | Msa1190890 | 0.840340 | 9.224135e-58 | -8.615850e-47 |
| Msa1089840 | Msa1190890 | -0.815993 | 6.952212e-52 | -8.615850e-47 |
| Msa0268090 | Msa1190890 | -0.805898 | 1.068985e-49 | -8.615850e-47 |
| Msa0270220 | Msa1190890 | 0.807816 | 4.202294e-50 | -8.615850e-47 |
| Msa0275400 | Msa1190890 | 0.827862 | 1.237158e-54 | -8.615850e-47 |
| Msa0279210 | Msa1190890 | 0.836300 | 1.014796e-56 | -8.615850e-47 |
| Msa0282250 | Msa1190890 | -0.806183 | 9.307275e-50 | -8.615850e-47 |
| Msa0288730 | Msa1190890 | -0.807977 | 3.883288e-50 | -8.615850e-47 |
| Msa0294150 | Msa1190890 | -0.810998 | 8.722377e-51 | -8.615850e-47 |
| Msa0294560 | Msa1190890 | 0.805649 | 1.205287e-49 | -8.615850e-47 |
| Msa0304290 | Msa1190890 | -0.800573 | 1.353027e-48 | -8.615850e-47 |
| Msa0304330 | Msa1190890 | -0.806364 | 8.528640e-50 | -8.615850e-47 |
| Msa0306210 | Msa1190890 | 0.835886 | 1.291995e-56 | -8.615850e-47 |
| Msa0307830 | Msa1190890 | 0.806022 | 1.006356e-49 | -8.615850e-47 |
| Msa0318970 | Msa1190890 | 0.826007 | 3.434839e-54 | -8.615850e-47 |
| Msa0333720 | Msa1190890 | 0.820768 | 5.760853e-53 | -8.615850e-47 |
| Msa0359560 | Msa1190890 | -0.805147 | 1.536104e-49 | -8.615850e-47 |
| Msa1116130 | Msa1190890 | 0.813604 | 2.353032e-51 | -8.615850e-47 |
| Msa1126120 | Msa1190890 | 0.818113 | 2.321979e-52 | -8.615850e-47 |
| Msa1130210 | Msa1190890 | 0.828709 | 7.732795e-55 | -8.615850e-47 |
| Msa1130270 | Msa1190890 | 0.807801 | 4.233496e-50 | -8.615850e-47 |
| Msa1130670 | Msa1190890 | 0.810034 | 1.408983e-50 | -8.615850e-47 |
| Msa1145250 | Msa1190890 | 0.816825 | 4.529899e-52 | -8.615850e-47 |
| Msa1157420 | Msa1190890 | 0.810480 | 1.128651e-50 | -8.615850e-47 |
| Msa1163650 | Msa1190890 | 0.808136 | 3.592666e-50 | -8.615850e-47 |
| Msa1165870 | Msa1190890 | -0.805484 | 1.305266e-49 | -8.615850e-47 |
| Msa1190890 | Msa1191470 | 0.804522 | 2.074580e-49 | -8.615850e-47 |
| Msa1190890 | Msa1193950 | 0.818513 | 1.885376e-52 | -8.615850e-47 |
| Msa1190890 | Msa1201430 | 0.819151 | 1.350228e-52 | -8.615850e-47 |
| Msa1190890 | Msa1208890 | 0.822488 | 2.305831e-53 | -8.615850e-47 |
| Msa1190890 | Msa1211140 | 0.831447 | 1.660877e-55 | -8.615850e-47 |
| Msa1190890 | Msa1236070 | 0.824216 | 9.100608e-54 | -8.615850e-47 |
| Msa1190890 | Msa1237940 | -0.804033 | 2.623390e-49 | -8.615850e-47 |
| Msa1190890 | Msa1244750 | 0.858427 | 8.300732e-63 | -8.615850e-47 |
| Msa1190890 | Msa1245940 | 0.822201 | 2.688434e-53 | -8.615850e-47 |
| Msa1190890 | Msa1246530 | 0.815610 | 8.462428e-52 | -8.615850e-47 |
| Msa1190890 | Msa1254370 | 0.808561 | 2.914992e-50 | -8.615850e-47 |
| Msa1190890 | Msa1259070 | 0.819231 | 1.294364e-52 | -8.615850e-47 |
| Msa1190890 | Msa1259490 | 0.810403 | 1.173108e-50 | -8.615850e-47 |
| Msa1190890 | Msa1259590 | 0.835977 | 1.225358e-56 | -8.615850e-47 |
| Msa1190890 | Msa1267260 | -0.809109 | 2.225718e-50 | -8.615850e-47 |
| Msa1190890 | Msa1269300 | -0.813880 | 2.045922e-51 | -8.615850e-47 |
| Msa1190890 | Msa1269580 | 0.846876 | 1.648399e-59 | -8.615850e-47 |
| Msa1190890 | Msa1270960 | 0.801297 | 9.624160e-49 | -8.615850e-47 |
| Msa1190890 | Msa1293480 | 0.813500 | 2.480968e-51 | -8.615850e-47 |
| Msa1190890 | Msa1294610 | 0.818529 | 1.869581e-52 | -8.615850e-47 |
| Msa1190890 | Msa1295490 | 0.800816 | 1.207027e-48 | -8.615850e-47 |
| Msa1190890 | Msa1299180 | 0.803717 | 3.050512e-49 | -8.615850e-47 |
| Msa1190890 | Msa1299290 | 0.831361 | 1.743466e-55 | -8.615850e-47 |
| Msa1190890 | Msa1302190 | 0.807835 | 4.163610e-50 | -8.615850e-47 |
| Msa1190890 | Msa1308080 | 0.807748 | 4.344516e-50 | -8.615850e-47 |
| Msa1190890 | Msa1322190 | -0.806982 | 6.312395e-50 | -8.615850e-47 |
| Msa1190890 | Msa1331920 | -0.808328 | 3.268530e-50 | -8.615850e-47 |
| Msa1190890 | Msa1332040 | 0.819022 | 1.444224e-52 | -8.615850e-47 |
| Msa1190890 | Msa1332870 | 0.865870 | 4.313550e-65 | -8.615850e-47 |
| Msa1190890 | Msa1340650 | -0.800249 | 1.574831e-48 | -8.615850e-47 |
| Msa1190890 | Msa1371090 | -0.830200 | 3.357478e-55 | -8.615850e-47 |
| Msa1190890 | Msa1376090 | 0.818895 | 1.543663e-52 | -8.615850e-47 |
| Msa1190890 | Msa1377540 | 0.803564 | 3.282866e-49 | -8.615850e-47 |
| Msa1190890 | Msa1400610 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
| Msa1190890 | Msa1403580 | 0.811605 | 6.438447e-51 | -8.615850e-47 |
| Msa1190890 | Msa1403930 | 0.840597 | 7.901676e-58 | -8.615850e-47 |
| Msa1190890 | Msa1404540 | -0.802311 | 5.959521e-49 | -8.615850e-47 |
| Msa1190890 | Msa1410430 | 0.814680 | 1.362075e-51 | -8.615850e-47 |
| Msa1190890 | Msa1417810 | 0.820002 | 8.632060e-53 | -8.615850e-47 |
| Msa1190890 | Msa1417830 | 0.849827 | 2.517682e-60 | -8.615850e-47 |
| Msa1190890 | Msa1429360 | 0.839897 | 1.203955e-57 | -8.615850e-47 |
| Msa1190890 | Msa1439960 | -0.800884 | 1.169041e-48 | -8.615850e-47 |
| Msa1190890 | Msa1442220 | 0.826424 | 2.733446e-54 | -8.615850e-47 |
| Msa1190890 | Msa1442700 | -0.805897 | 1.069057e-49 | -8.615850e-47 |
| Msa1190890 | Msa1443290 | 0.802599 | 5.197290e-49 | -8.615850e-47 |
| Msa1190890 | Msa1444310 | -0.801833 | 7.469941e-49 | -8.615850e-47 |
| Msa1190890 | Msa1445400 | 0.818209 | 2.209046e-52 | -8.615850e-47 |
| Msa1190890 | Msa1445420 | 0.848169 | 7.275220e-60 | -8.615850e-47 |
| Msa1190890 | Msa1447110 | -0.818058 | 2.390003e-52 | -8.615850e-47 |
| Msa1190890 | Msa1449350 | 0.813114 | 3.014860e-51 | -8.615850e-47 |
| Msa1190890 | Msa1453780 | 0.814325 | 1.632197e-51 | -8.615850e-47 |
| Msa1190890 | Msa1459760 | 0.828820 | 7.269887e-55 | -8.615850e-47 |
| Msa1190890 | Msa1461280 | -0.807935 | 3.963636e-50 | -8.615850e-47 |
| Msa0514290 | Msa1190890 | 0.816811 | 4.562437e-52 | -8.615850e-47 |
| Msa0517490 | Msa1190890 | -0.812409 | 4.302784e-51 | -8.615850e-47 |
| Msa0553220 | Msa1190890 | 0.859913 | 2.975787e-63 | -8.615850e-47 |
| Msa0563260 | Msa1190890 | 0.815093 | 1.103063e-51 | -8.615850e-47 |
| Msa0568820 | Msa1190890 | -0.802539 | 5.347882e-49 | -8.615850e-47 |
| Msa0591770 | Msa1190890 | -0.823524 | 1.322731e-53 | -8.615850e-47 |
| Msa0855160 | Msa1190890 | 0.809317 | 2.008761e-50 | -8.615850e-47 |
| Msa0860900 | Msa1190890 | 0.848676 | 5.265206e-60 | -8.615850e-47 |
| Msa0864470 | Msa1190890 | 0.845495 | 3.918981e-59 | -8.615850e-47 |
| Msa0867050 | Msa1190890 | 0.813876 | 2.049848e-51 | -8.615850e-47 |
| Msa0874500 | Msa1190890 | -0.811167 | 8.017853e-51 | -8.615850e-47 |
| Msa0899240 | Msa1190890 | 0.825986 | 3.475312e-54 | -8.615850e-47 |
| Msa0909000 | Msa1190890 | 0.804328 | 2.276960e-49 | -8.615850e-47 |
| Msa0930460 | Msa1190890 | 0.807549 | 4.788534e-50 | -8.615850e-47 |
| Msa0942550 | Msa1190890 | 0.844468 | 7.418983e-59 | -8.615850e-47 |
| Msa0942560 | Msa1190890 | 0.855627 | 5.556183e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190890 | MtrunA17_Chr8g0360221 | 98.933 | 375 | 4 | 0 | 1 | 375 | 1 | 375 | 0.0 | 777 |
| Msa1190890 | MtrunA17_Chr3g0140441 | 40.076 | 262 | 125 | 4 | 1 | 260 | 1 | 232 | 6.89e-65 | 206 |
| Msa1190890 | MtrunA17_Chr8g0340501 | 38.372 | 258 | 148 | 3 | 1 | 258 | 1 | 247 | 9.18e-50 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190890 | AT3G18380.1 | 69.637 | 303 | 76 | 5 | 1 | 287 | 1 | 303 | 4.79e-152 | 432 |
| Msa1190890 | AT3G18380.2 | 69.408 | 304 | 76 | 6 | 1 | 287 | 1 | 304 | 3.19e-150 | 428 |
| Msa1190890 | AT3G18380.3 | 67.949 | 312 | 82 | 7 | 1 | 294 | 1 | 312 | 1.46e-149 | 426 |
| Msa1190890 | AT1G15215.2 | 43.952 | 248 | 133 | 3 | 14 | 259 | 14 | 257 | 2.18e-63 | 203 |
| Msa1190890 | AT1G15215.4 | 42.979 | 235 | 128 | 3 | 14 | 246 | 14 | 244 | 1.11e-56 | 186 |
| Msa1190890 | AT1G15215.3 | 42.979 | 235 | 128 | 3 | 14 | 246 | 14 | 244 | 1.27e-56 | 186 |
| Msa1190890 | AT1G15215.1 | 35.256 | 156 | 92 | 4 | 14 | 167 | 14 | 162 | 9.22e-19 | 83.2 |
Find 108 sgRNAs with CRISPR-Local
Find 582 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTGAATATATTTGTTTA+AGG | 0.167227 | 8_1:+34183890 | Msa1190890:exon |
| GGTTGAGTCATTATCCTTCC+TGG | 0.211207 | 8_1:-34178675 | None:intergenic |
| TGTAATCTGTAATCAGTTTC+AGG | 0.218700 | 8_1:-34183535 | None:intergenic |
| GAAACATTTGTTTGCAAAAC+AGG | 0.257239 | 8_1:-34183706 | None:intergenic |
| AAAATAAGCGATATGCTATA+AGG | 0.259455 | 8_1:+34178589 | Msa1190890:CDS |
| GTTCCTGCTCCTTCAGCTTC+AGG | 0.261491 | 8_1:+34178711 | Msa1190890:CDS |
| AAGCACTTGCAGACAAGTTT+AGG | 0.288349 | 8_1:+34178329 | Msa1190890:CDS |
| AAAGGCATATACCAAATTCT+AGG | 0.309387 | 8_1:-34183946 | None:intergenic |
| GGCGTGATATTTAACTTTGC+AGG | 0.330713 | 8_1:-34178630 | None:intergenic |
| CTTTCTATCATACAGACATT+TGG | 0.352765 | 8_1:+34181472 | Msa1190890:CDS |
| ATGGAATTTGAAGCTAAATC+TGG | 0.358674 | 8_1:+34181327 | Msa1190890:CDS |
| GGTGTTGTTGTTGTTGATGT+TGG | 0.360310 | 8_1:-34176350 | None:intergenic |
| CTCGCACCATGAACATTTGC+TGG | 0.369463 | 8_1:-34183619 | None:intergenic |
| TTTCATTGCAGGTATGGAAT+TGG | 0.369862 | 8_1:+34178562 | Msa1190890:intron |
| CTGAACTATGGGAATTGAAA+AGG | 0.377032 | 8_1:+34184042 | Msa1190890:three_prime_UTR |
| ATATACCAAATTCTAGGGTT+TGG | 0.391725 | 8_1:-34183940 | None:intergenic |
| GTTGAGTCATTATCCTTCCT+GGG | 0.392666 | 8_1:-34178674 | None:intergenic |
| ACCACACATCTCTCTGTTGA+TGG | 0.393541 | 8_1:+34176370 | Msa1190890:exon |
| CCAGTGAATGCGGCGGTGCT+TGG | 0.419350 | 8_1:-34183808 | None:intergenic |
| ATCTGTATAGGTAACAGAAA+TGG | 0.427116 | 8_1:+34178255 | Msa1190890:intron |
| GGATCCACATTCATACTTTG+TGG | 0.428698 | 8_1:-34183736 | None:intergenic |
| TTAAGGCCTCTGCCTTCTGT+GGG | 0.433234 | 8_1:+34183907 | Msa1190890:three_prime_UTR |
| AAATAAGCGATATGCTATAA+GGG | 0.442347 | 8_1:+34178590 | Msa1190890:CDS |
| CCAAGCACCGCCGCATTCAC+TGG | 0.450582 | 8_1:+34183808 | Msa1190890:CDS |
| GGCTGAGTGAAACGGAAGGC+GGG | 0.454503 | 8_1:-34176416 | None:intergenic |
| GGTTACTAATCCTTCTGAAA+TGG | 0.459416 | 8_1:+34183642 | Msa1190890:CDS |
| TGTAATCTTGCCTTTACGAT+CGG | 0.459596 | 8_1:-34178461 | None:intergenic |
| CGCAATCTTCTGCTGATCCG+TGG | 0.463686 | 8_1:-34183587 | None:intergenic |
| GAAGCTGAAGGAGCAGGAAC+AGG | 0.470238 | 8_1:-34178708 | None:intergenic |
| TTTAAGGCCTCTGCCTTCTG+TGG | 0.471821 | 8_1:+34183906 | Msa1190890:three_prime_UTR |
| GTAATCTTGCCTTTACGATC+GGG | 0.473723 | 8_1:-34178460 | None:intergenic |
| GTCTTTGAGCATCAAGGACA+TGG | 0.475882 | 8_1:-34182285 | None:intergenic |
| ATATTCAAGTTACTTCCCTT+CGG | 0.477909 | 8_1:-34183878 | None:intergenic |
| GACATGGGCATCAAAGTAAA+GGG | 0.481099 | 8_1:-34182269 | None:intergenic |
| CAAATGTCTGTATGATAGAA+AGG | 0.481293 | 8_1:-34181471 | None:intergenic |
| GTCAAATCAGTCCGAGGCAT+GGG | 0.481986 | 8_1:-34178651 | None:intergenic |
| GATCATCCAGCAAATGTTCA+TGG | 0.483799 | 8_1:+34183613 | Msa1190890:CDS |
| CGGGGCCTCCGTTACTGGGT+GGG | 0.497571 | 8_1:-34176397 | None:intergenic |
| GATTACAGTACAGATGAAAC+AGG | 0.498566 | 8_1:+34178477 | Msa1190890:CDS |
| AACTAGTTAGAAGTTTGAAA+AGG | 0.499069 | 8_1:-34183964 | None:intergenic |
| GGACATGGGCATCAAAGTAA+AGG | 0.499318 | 8_1:-34182270 | None:intergenic |
| GCCAGGAAATCGTGCCGCTT+AGG | 0.503677 | 8_1:+34183497 | Msa1190890:intron |
| TTGTTGTTGATGTTGGAGAA+AGG | 0.505007 | 8_1:-34176343 | None:intergenic |
| ACAAAAGCTGATGTTCAAGC+TGG | 0.509935 | 8_1:+34183772 | Msa1190890:CDS |
| CTACCTGAAGCTGAAGGAGC+AGG | 0.516322 | 8_1:-34178714 | None:intergenic |
| GAAGCTAAATCTGGAAGAGA+TGG | 0.517358 | 8_1:+34181336 | Msa1190890:CDS |
| TGAACTATGGGAATTGAAAA+GGG | 0.519196 | 8_1:+34184043 | Msa1190890:three_prime_UTR |
| CCTCGGACTGATTTGACCCC+AGG | 0.520581 | 8_1:+34178657 | Msa1190890:CDS |
| AAGGCATATACCAAATTCTA+GGG | 0.520922 | 8_1:-34183945 | None:intergenic |
| CAAGTTACTTCCCTTCGGCC+AGG | 0.523928 | 8_1:-34183873 | None:intergenic |
| ACATTTGGAGAGCAGTGATC+CGG | 0.538548 | 8_1:+34181487 | Msa1190890:CDS |
| AGACGGAGGCATGATGTAAG+AGG | 0.539794 | 8_1:+34182304 | Msa1190890:CDS |
| TAAATATCACGCCCATGCCT+CGG | 0.541650 | 8_1:+34178640 | Msa1190890:CDS |
| AAACAAAGTATGAGATCACC+AGG | 0.544394 | 8_1:-34182105 | None:intergenic |
| TGCCGCTTAGGAAGATTTGT+CGG | 0.552355 | 8_1:+34183509 | Msa1190890:CDS |
| GCAATCTTCTGCTGATCCGT+GGG | 0.554224 | 8_1:-34183586 | None:intergenic |
| GCTGAGTGAAACGGAAGGCG+GGG | 0.554948 | 8_1:-34176415 | None:intergenic |
| ATACCTCGGGCTGAGTGAAA+CGG | 0.555409 | 8_1:-34176424 | None:intergenic |
| GCGGGGCCTCCGTTACTGGG+TGG | 0.555777 | 8_1:-34176398 | None:intergenic |
| AGTGAATCACCCGATCGTAA+AGG | 0.556434 | 8_1:+34178451 | Msa1190890:intron |
| GGCTCCTGAAAATTCAGTTA+TGG | 0.559539 | 8_1:+34181308 | Msa1190890:CDS |
| ATGGGTCGCCCACCCAGTAA+CGG | 0.566642 | 8_1:+34176389 | Msa1190890:CDS |
| GCTTGAAGAACATCTCGTGC+TGG | 0.567998 | 8_1:-34178310 | None:intergenic |
| CAGCAAATGTTCATGGTGCG+AGG | 0.569607 | 8_1:+34183620 | Msa1190890:CDS |
| GGTCAAATCAGTCCGAGGCA+TGG | 0.569910 | 8_1:-34178652 | None:intergenic |
| GGGCTGAGTGAAACGGAAGG+CGG | 0.572841 | 8_1:-34176417 | None:intergenic |
| CCACACATCTCTCTGTTGAT+GGG | 0.580437 | 8_1:+34176371 | Msa1190890:exon |
| GAATGTGTCGCAGTGCTCCC+TGG | 0.583022 | 8_1:+34182087 | Msa1190890:CDS |
| ATTAATCCACTCATCTTCCT+CGG | 0.585484 | 8_1:-34182019 | None:intergenic |
| GACTTCAGGAACACGGCTAG+TGG | 0.589385 | 8_1:-34183839 | None:intergenic |
| CTACTCAAAACCTGGCCGAA+GGG | 0.589785 | 8_1:+34183863 | Msa1190890:CDS |
| TCTACTCAAAACCTGGCCGA+AGG | 0.590738 | 8_1:+34183862 | Msa1190890:CDS |
| GCCTCCGTCTTTGAGCATCA+AGG | 0.590882 | 8_1:-34182291 | None:intergenic |
| TTGAGTCATTATCCTTCCTG+GGG | 0.591497 | 8_1:-34178673 | None:intergenic |
| GCAGGAACAGGAGAAGCTGT+TGG | 0.594628 | 8_1:-34178696 | None:intergenic |
| TGAAGTCTCTACTCAAAACC+TGG | 0.601287 | 8_1:+34183855 | Msa1190890:CDS |
| GGCAATGATTCCAGTGAATG+CGG | 0.603755 | 8_1:-34183818 | None:intergenic |
| CACAGTTCAAACAACAGCAA+AGG | 0.607569 | 8_1:+34181284 | Msa1190890:intron |
| GATTCACATGGCAGAGAGCG+CGG | 0.607948 | 8_1:-34182060 | None:intergenic |
| ATGTCCTTGATGCTCAAAGA+CGG | 0.608783 | 8_1:+34182287 | Msa1190890:CDS |
| AGCAAATGTTCATGGTGCGA+GGG | 0.609406 | 8_1:+34183621 | Msa1190890:CDS |
| GGATCAGCAGAAGATTGCGT+TGG | 0.610789 | 8_1:+34183591 | Msa1190890:CDS |
| ATGAACCCCACAGAAGGCAG+AGG | 0.613791 | 8_1:-34183913 | None:intergenic |
| AACATTCTACCTGAAGCTGA+AGG | 0.613833 | 8_1:-34178720 | None:intergenic |
| TCCACATTCATACTTTGTGG+TGG | 0.615610 | 8_1:-34183733 | None:intergenic |
| TTGGATCCGAGGAAGATGAG+TGG | 0.615863 | 8_1:+34182013 | Msa1190890:CDS |
| ACCACCACAAAGTATGAATG+TGG | 0.618600 | 8_1:+34183732 | Msa1190890:CDS |
| GAATCAAGCAAAACCAGCGA+GGG | 0.625087 | 8_1:+34176286 | Msa1190890:five_prime_UTR |
| CTTCCGTTTCACTCAGCCCG+AGG | 0.628138 | 8_1:+34176421 | Msa1190890:CDS |
| AGTTCAAACAACAGCAAAGG+CGG | 0.631634 | 8_1:+34181287 | Msa1190890:intron |
| TAAGGCCTCTGCCTTCTGTG+GGG | 0.634016 | 8_1:+34183908 | Msa1190890:three_prime_UTR |
| TGTGAATGATGCAGCACCCA+CGG | 0.641428 | 8_1:+34183570 | Msa1190890:CDS |
| CTATGATCACGATCAATCTG+AGG | 0.641893 | 8_1:+34182351 | Msa1190890:CDS |
| GAGTAGAGACTTCAGGAACA+CGG | 0.647793 | 8_1:-34183846 | None:intergenic |
| AATCTGGAAGAGATGGAGCA+TGG | 0.658527 | 8_1:+34181343 | Msa1190890:CDS |
| TGAATGAATGAAACCCTCGC+TGG | 0.660070 | 8_1:-34176299 | None:intergenic |
| CTCCGACAAATCTTCCTAAG+CGG | 0.665093 | 8_1:-34183511 | None:intergenic |
| CGAATCAAGCAAAACCAGCG+AGG | 0.669845 | 8_1:+34176285 | Msa1190890:five_prime_UTR |
| CCTGGGGTCAAATCAGTCCG+AGG | 0.675720 | 8_1:-34178657 | None:intergenic |
| TCCTTGATGCTCAAAGACGG+AGG | 0.675814 | 8_1:+34182290 | Msa1190890:CDS |
| GGACTGATTTGACCCCAGGA+AGG | 0.679224 | 8_1:+34178661 | Msa1190890:CDS |
| GGTCGCCCACCCAGTAACGG+AGG | 0.681262 | 8_1:+34176392 | Msa1190890:CDS |
| ACACATTCTGATGATTCACA+TGG | 0.682055 | 8_1:-34182072 | None:intergenic |
| TCTTTGAGCATCAAGGACAT+GGG | 0.687814 | 8_1:-34182284 | None:intergenic |
| CTCGGGCTGAGTGAAACGGA+AGG | 0.689498 | 8_1:-34176420 | None:intergenic |
| CCCATCAACAGAGAGATGTG+TGG | 0.721278 | 8_1:-34176371 | None:intergenic |
| AATGATTCCAGTGAATGCGG+CGG | 0.736741 | 8_1:-34183815 | None:intergenic |
| AACAAAGTATGAGATCACCA+GGG | 0.773298 | 8_1:-34182104 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGAAAAATATAGTTTA+AGG | + | chr8_1:34180653-34180672 | Msa1190890:intron | 10.0% |
| !! | AAAAGAAAAATATAGTTTAA+GGG | + | chr8_1:34180654-34180673 | Msa1190890:intron | 10.0% |
| !!! | TTATAAAAAGTTACTATTTT+AGG | - | chr8_1:34180717-34180736 | None:intergenic | 10.0% |
| !! | TCAAAAGAAAATTAAAAAAA+AGG | + | chr8_1:34180882-34180901 | Msa1190890:intron | 10.0% |
| !!! | ATATAATTTACATTTTTGAA+TGG | - | chr8_1:34182773-34182792 | None:intergenic | 10.0% |
| !! | AAAGAAAAGAAATACAATAT+GGG | - | chr8_1:34177059-34177078 | None:intergenic | 15.0% |
| !!! | ATTGTTATATTTTGTTACTA+AGG | + | chr8_1:34178504-34178523 | Msa1190890:intron | 15.0% |
| !!! | TTGTTTATAATTTTAACTTG+TGG | + | chr8_1:34178963-34178982 | Msa1190890:intron | 15.0% |
| !!! | ATGATAATGAAAAATAAAAG+TGG | - | chr8_1:34179057-34179076 | None:intergenic | 15.0% |
| !! | TTAAAAAAAAGGAGATAAAT+TGG | + | chr8_1:34180893-34180912 | Msa1190890:intron | 15.0% |
| !! | TAAAAAAAAGGAGATAAATT+GGG | + | chr8_1:34180894-34180913 | Msa1190890:intron | 15.0% |
| !!! | TTTTTGTTTGTAAAAAAGTA+TGG | + | chr8_1:34181062-34181081 | Msa1190890:intron | 15.0% |
| !!! | TTTCCTCTTTAATTATTTTT+AGG | + | chr8_1:34181372-34181391 | Msa1190890:intron | 15.0% |
| !! | TAACCTAAAAATAATTAAAG+AGG | - | chr8_1:34181378-34181397 | None:intergenic | 15.0% |
| !!! | AATACTTCTTTTAAACAAAT+TGG | - | chr8_1:34181736-34181755 | None:intergenic | 15.0% |
| !!! | TTAAAAGAAGTATTATGTAA+TGG | + | chr8_1:34181742-34181761 | Msa1190890:intron | 15.0% |
| !! | AAACTTAACAAAATAAGATA+GGG | - | chr8_1:34181920-34181939 | None:intergenic | 15.0% |
| !! | AAAACTTAACAAAATAAGAT+AGG | - | chr8_1:34181921-34181940 | None:intergenic | 15.0% |
| !!! | TCTTATTTTGTTAAGTTTTA+TGG | + | chr8_1:34181922-34181941 | Msa1190890:intron | 15.0% |
| !!! | ATAATAAGTTAATTTGATCA+TGG | + | chr8_1:34182145-34182164 | Msa1190890:intron | 15.0% |
| !! | AAAGATCAAAATTCAATAAA+TGG | - | chr8_1:34182223-34182242 | None:intergenic | 15.0% |
| !! | ATAAAAGATATAAATACAAG+AGG | - | chr8_1:34182399-34182418 | None:intergenic | 15.0% |
| !! | TATCCAAAAATTAAAACTAT+GGG | - | chr8_1:34182499-34182518 | None:intergenic | 15.0% |
| !! | ATATCCAAAAATTAAAACTA+TGG | - | chr8_1:34182500-34182519 | None:intergenic | 15.0% |
| !!! | TTTTTTTCATTTATTTGGAT+TGG | + | chr8_1:34182531-34182550 | Msa1190890:intron | 15.0% |
| !! | TATAGATGAAAAATAAAGAT+TGG | - | chr8_1:34182727-34182746 | None:intergenic | 15.0% |
| !!! | TCTTTTTTAGTTTTTATCTT+AGG | + | chr8_1:34182825-34182844 | Msa1190890:intron | 15.0% |
| !!! | ATGTCATTTATTTATTCTTT+TGG | - | chr8_1:34183016-34183035 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAATTACACC+AGG | - | chr8_1:34183068-34183087 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCATTTGAGTTT+TGG | + | chr8_1:34183087-34183106 | Msa1190890:intron | 15.0% |
| !! | AACTTGAATATATTTGTTTA+AGG | + | chr8_1:34183890-34183909 | Msa1190890:exon | 15.0% |
| !! | ATTATAGCACTTATTAAAAA+AGG | - | chr8_1:34184110-34184129 | None:intergenic | 15.0% |
| !! | AACAGATATATTCATTACAA+TGG | + | chr8_1:34176563-34176582 | Msa1190890:intron | 20.0% |
| !! | ATTACAATGGATGTTAAATT+AGG | + | chr8_1:34176576-34176595 | Msa1190890:intron | 20.0% |
| !! | TTACAATGGATGTTAAATTA+GGG | + | chr8_1:34176577-34176596 | Msa1190890:intron | 20.0% |
| !! | GAAATAAAATCTCTCAAAAT+CGG | + | chr8_1:34176896-34176915 | Msa1190890:intron | 20.0% |
| !! | CAAAGAAAAGAAATACAATA+TGG | - | chr8_1:34177060-34177079 | None:intergenic | 20.0% |
| !!! | CTAATAGTGTTTTAGATAAT+AGG | + | chr8_1:34177257-34177276 | Msa1190890:intron | 20.0% |
| !! | GTTTCTGTTGTTAATTATAT+TGG | + | chr8_1:34178042-34178061 | Msa1190890:intron | 20.0% |
| !! | GACAATTTAATTCTTTAATG+CGG | - | chr8_1:34178079-34178098 | None:intergenic | 20.0% |
| !! | ATATGATAGTAACTTGATAA+TGG | - | chr8_1:34178148-34178167 | None:intergenic | 20.0% |
| !! | TAAAAAGTAGTTTATGGAAT+GGG | - | chr8_1:34178236-34178255 | None:intergenic | 20.0% |
| !! | ATAAAAAGTAGTTTATGGAA+TGG | - | chr8_1:34178237-34178256 | None:intergenic | 20.0% |
| !! | TACAGATAAAAAGTAGTTTA+TGG | - | chr8_1:34178242-34178261 | None:intergenic | 20.0% |
| !!! | AAACTACTTTTTATCTGTAT+AGG | + | chr8_1:34178243-34178262 | Msa1190890:intron | 20.0% |
| !!! | CAAATATAATTCCACATTTT+AGG | - | chr8_1:34178411-34178430 | None:intergenic | 20.0% |
| !! | GATTCACTAAAACAAAAAAA+TGG | - | chr8_1:34178439-34178458 | None:intergenic | 20.0% |
| !! | AATATTTAGGTCATATTTAC+AGG | + | chr8_1:34179529-34179548 | Msa1190890:intron | 20.0% |
| !!! | AAGTTTTGTGATTTTATTTG+AGG | - | chr8_1:34179810-34179829 | None:intergenic | 20.0% |
| !!! | TCTATGATATAATGTTTCTA+AGG | + | chr8_1:34180176-34180195 | Msa1190890:intron | 20.0% |
| !!! | TATATCTTATTTTTTATGGC+TGG | - | chr8_1:34180526-34180545 | None:intergenic | 20.0% |
| !! | AAAGGCAATAATTAAACTAT+GGG | - | chr8_1:34180849-34180868 | None:intergenic | 20.0% |
| !! | AATCACAATTAGTATAATGT+GGG | - | chr8_1:34180942-34180961 | None:intergenic | 20.0% |
| !!! | TCTTAATTAATTTTCATCAG+TGG | + | chr8_1:34181406-34181425 | Msa1190890:intron | 20.0% |
| !! | ACAATCTAATGTTAAATTAC+CGG | - | chr8_1:34181509-34181528 | None:intergenic | 20.0% |
| !!! | ATTAATACTGGTTTTTGATA+TGG | + | chr8_1:34181554-34181573 | Msa1190890:intron | 20.0% |
| !!! | TTTGTCTTCAATTATTTTTG+TGG | + | chr8_1:34181861-34181880 | Msa1190890:intron | 20.0% |
| !!! | TTGTCTTCAATTATTTTTGT+GGG | + | chr8_1:34181862-34181881 | Msa1190890:intron | 20.0% |
| !!! | TGGTAAGAAACAATAATTTT+AGG | - | chr8_1:34182203-34182222 | None:intergenic | 20.0% |
| !!! | ATTTTGATCTTTGACATTAA+AGG | + | chr8_1:34182231-34182250 | Msa1190890:intron | 20.0% |
| !! | ATCCAAAAATTAAAACTATG+GGG | - | chr8_1:34182498-34182517 | None:intergenic | 20.0% |
| !!! | TTTTTATGACAAAATTACAC+CGG | + | chr8_1:34182583-34182602 | Msa1190890:intron | 20.0% |
| !! | TAGATTAAGAATATGAAAGT+TGG | + | chr8_1:34182949-34182968 | Msa1190890:intron | 20.0% |
| !!! | CGTAAACATTTTTAAAGATA+AGG | + | chr8_1:34182980-34182999 | Msa1190890:intron | 20.0% |
| !! | GAAACTTTAAACTAAGTTAA+AGG | + | chr8_1:34183040-34183059 | Msa1190890:intron | 20.0% |
| !! | AGATTAAATTGTATCTGAAT+AGG | - | chr8_1:34183165-34183184 | None:intergenic | 20.0% |
| !!! | GCATTAAAATTTGAAACATT+TGG | - | chr8_1:34183401-34183420 | None:intergenic | 20.0% |
| !!! | TTTCAAATTTTAATGCAAAG+AGG | + | chr8_1:34183405-34183424 | Msa1190890:intron | 20.0% |
| ! | TACAATGGATGTTAAATTAG+GGG | + | chr8_1:34176578-34176597 | Msa1190890:intron | 25.0% |
| !! | CATGGAATTTTGAATAATGA+GGG | + | chr8_1:34176744-34176763 | Msa1190890:intron | 25.0% |
| ! | ATGGATAAGTGTTTAAAAGT+GGG | - | chr8_1:34176936-34176955 | None:intergenic | 25.0% |
| ! | TATGTTAAAATGTCTCACAT+CGG | - | chr8_1:34176971-34176990 | None:intergenic | 25.0% |
| !!! | CATTTTAACATATAGTGAGA+CGG | + | chr8_1:34176979-34176998 | Msa1190890:intron | 25.0% |
| !!! | ATTTTAACATATAGTGAGAC+GGG | + | chr8_1:34176980-34176999 | Msa1190890:intron | 25.0% |
| !! | TCTTTGTTTATCAAAAACAG+AGG | + | chr8_1:34177074-34177093 | Msa1190890:intron | 25.0% |
| !! | CTTTGTTTATCAAAAACAGA+GGG | + | chr8_1:34177075-34177094 | Msa1190890:intron | 25.0% |
| ! | ACCATAGTAGATACAAAATT+TGG | + | chr8_1:34177138-34177157 | Msa1190890:intron | 25.0% |
| !! | ACCAAATTTTGTATCTACTA+TGG | - | chr8_1:34177142-34177161 | None:intergenic | 25.0% |
| ! | ATAGGAAGAGAGAAATAATA+AGG | + | chr8_1:34177275-34177294 | Msa1190890:intron | 25.0% |
| !! | ACATTATTTTCACTATGCAA+GGG | - | chr8_1:34177419-34177438 | None:intergenic | 25.0% |
| !! | TACATTATTTTCACTATGCA+AGG | - | chr8_1:34177420-34177439 | None:intergenic | 25.0% |
| ! | TAGTCTACAATACCATAAAA+AGG | - | chr8_1:34177496-34177515 | None:intergenic | 25.0% |
| ! | AAGAGATGAATTGTAAACTA+AGG | - | chr8_1:34177652-34177671 | None:intergenic | 25.0% |
| ! | CTATCAATATAATTGACAAC+AGG | - | chr8_1:34178105-34178124 | None:intergenic | 25.0% |
| !! | ATTTTAGATAAACAGAGAAG+AGG | - | chr8_1:34178196-34178215 | None:intergenic | 25.0% |
| ! | TTTAATATGCTCCTAAAATG+TGG | + | chr8_1:34178397-34178416 | Msa1190890:intron | 25.0% |
| !! | GTTATATTTTGTTACTAAGG+AGG | + | chr8_1:34178507-34178526 | Msa1190890:intron | 25.0% |
| ! | GAAATGGAAAACTAAGAAAA+TGG | - | chr8_1:34178546-34178565 | None:intergenic | 25.0% |
| ! | AAAATAAGCGATATGCTATA+AGG | + | chr8_1:34178589-34178608 | Msa1190890:CDS | 25.0% |
| ! | AAATAAGCGATATGCTATAA+GGG | + | chr8_1:34178590-34178609 | Msa1190890:CDS | 25.0% |
| ! | TTTACCCTACATAGTTTATA+GGG | + | chr8_1:34178910-34178929 | Msa1190890:intron | 25.0% |
| ! | TATGCTTATTACCACAATAA+TGG | + | chr8_1:34179084-34179103 | Msa1190890:intron | 25.0% |
| !! | ATTACCACAATAATGGAAAA+TGG | + | chr8_1:34179091-34179110 | Msa1190890:intron | 25.0% |
| !! | TTACCACAATAATGGAAAAT+GGG | + | chr8_1:34179092-34179111 | Msa1190890:intron | 25.0% |
| ! | AAATGGGATAATATCATTGA+AGG | + | chr8_1:34179108-34179127 | Msa1190890:intron | 25.0% |
| ! | ATAATATCATTGAAGGTTGA+AGG | + | chr8_1:34179115-34179134 | Msa1190890:intron | 25.0% |
| ! | TAATATCATTGAAGGTTGAA+GGG | + | chr8_1:34179116-34179135 | Msa1190890:intron | 25.0% |
| ! | TTATGTGTCTTTAATAGAAC+TGG | + | chr8_1:34179165-34179184 | Msa1190890:intron | 25.0% |
| ! | AGCATAGATTCAAAACAATA+TGG | + | chr8_1:34179262-34179281 | Msa1190890:intron | 25.0% |
| ! | GCATAGATTCAAAACAATAT+GGG | + | chr8_1:34179263-34179282 | Msa1190890:intron | 25.0% |
| ! | TATAAACTTCCCTAATTGTA+AGG | + | chr8_1:34179479-34179498 | Msa1190890:intron | 25.0% |
| ! | TAAATATTGCTTATAAGGCT+TGG | - | chr8_1:34179517-34179536 | None:intergenic | 25.0% |
| !! | AAGCCTTATAAGCAATATTT+AGG | + | chr8_1:34179516-34179535 | Msa1190890:intron | 25.0% |
| ! | TGACCTAAATATTGCTTATA+AGG | - | chr8_1:34179522-34179541 | None:intergenic | 25.0% |
| ! | AATCACAAAACTTACTTGAA+AGG | + | chr8_1:34179817-34179836 | Msa1190890:intron | 25.0% |
| ! | TGTTCGTCAATATATAATGT+GGG | - | chr8_1:34180130-34180149 | None:intergenic | 25.0% |
| !!! | CTATTTTTATGTCTTTGCAA+TGG | - | chr8_1:34180411-34180430 | None:intergenic | 25.0% |
| ! | TGAGTATTTATGTATACTGT+TGG | - | chr8_1:34180455-34180474 | None:intergenic | 25.0% |
| !! | GTTTGGTGAATAATTGTTTA+TGG | - | chr8_1:34180598-34180617 | None:intergenic | 25.0% |
| ! | TTGTTTCGTTATTCTTTGTT+TGG | - | chr8_1:34180615-34180634 | None:intergenic | 25.0% |
| ! | AACGAAACAATTAAACATTG+TGG | + | chr8_1:34180625-34180644 | Msa1190890:intron | 25.0% |
| ! | CAAAGGCAATAATTAAACTA+TGG | - | chr8_1:34180850-34180869 | None:intergenic | 25.0% |
| ! | CAATCACAATTAGTATAATG+TGG | - | chr8_1:34180943-34180962 | None:intergenic | 25.0% |
| ! | TACTAATTGTGATTGTTGAA+AGG | + | chr8_1:34180948-34180967 | Msa1190890:intron | 25.0% |
| ! | ACCTAATTTCTTAAGTGAAA+GGG | - | chr8_1:34181039-34181058 | None:intergenic | 25.0% |
| ! | AACCTAATTTCTTAAGTGAA+AGG | - | chr8_1:34181040-34181059 | None:intergenic | 25.0% |
| ! | TTGTAATTAGGAAAAAATCC+TGG | + | chr8_1:34181179-34181198 | Msa1190890:intron | 25.0% |
| !! | AATTCCATAACTGAATTTTC+AGG | - | chr8_1:34181315-34181334 | None:intergenic | 25.0% |
| ! | CTTGATTGAAAATACTATCA+GGG | - | chr8_1:34181597-34181616 | None:intergenic | 25.0% |
| !!! | GTGTCATTTATTTATGATCT+AGG | - | chr8_1:34181657-34181676 | None:intergenic | 25.0% |
| ! | AAAAAGATATTGCCATTACA+TGG | - | chr8_1:34181957-34181976 | None:intergenic | 25.0% |
| !! | AATATCTTTTTCCATGTTTC+AGG | + | chr8_1:34181966-34181985 | Msa1190890:intron | 25.0% |
| !!! | ATCCCCATAGTTTTAATTTT+TGG | + | chr8_1:34182493-34182512 | Msa1190890:intron | 25.0% |
| !! | TTTTATGACAAAATTACACC+GGG | + | chr8_1:34182584-34182603 | Msa1190890:intron | 25.0% |
| ! | ATACGGAAAAAAAAGATACA+GGG | - | chr8_1:34182643-34182662 | None:intergenic | 25.0% |
| ! | TCTATGTCTAAAAACGTTAA+TGG | + | chr8_1:34182694-34182713 | Msa1190890:intron | 25.0% |
| !! | GAAAAGTACAATGGAAATTT+GGG | - | chr8_1:34183224-34183243 | None:intergenic | 25.0% |
| !! | TGAAAAGTACAATGGAAATT+TGG | - | chr8_1:34183225-34183244 | None:intergenic | 25.0% |
| !! | CATTTGAATGAAAAGTACAA+TGG | - | chr8_1:34183233-34183252 | None:intergenic | 25.0% |
| !! | CATTGTACTTTTCATTCAAA+TGG | + | chr8_1:34183231-34183250 | Msa1190890:intron | 25.0% |
| ! | AACCTAAATGATTTATGACT+AGG | + | chr8_1:34183301-34183320 | Msa1190890:intron | 25.0% |
| ! | TTGTTAATTCACATATTCTG+TGG | + | chr8_1:34183470-34183489 | Msa1190890:intron | 25.0% |
| ! | AACTAGTTAGAAGTTTGAAA+AGG | - | chr8_1:34183967-34183986 | None:intergenic | 25.0% |
| !! | TTTTCAAACTTCTAACTAGT+TGG | + | chr8_1:34183966-34183985 | Msa1190890:three_prime_UTR | 25.0% |
| ! | CTGTCAAAAAAATAAAGAGA+GGG | - | chr8_1:34184076-34184095 | None:intergenic | 25.0% |
| ! | TAGCACTTATTAAAAAAGGA+GGG | - | chr8_1:34184106-34184125 | None:intergenic | 25.0% |
| ! | ATAGCACTTATTAAAAAAGG+AGG | - | chr8_1:34184107-34184126 | None:intergenic | 25.0% |
| AAAAAGAAGAAGAAGAAGAG+TGG | - | chr8_1:34176456-34176475 | None:intergenic | 30.0% | |
| CATAGTAAAAATCATGCAGA+GGG | - | chr8_1:34176490-34176509 | None:intergenic | 30.0% | |
| TCATAGTAAAAATCATGCAG+AGG | - | chr8_1:34176491-34176510 | None:intergenic | 30.0% | |
| CCTCATTATTCAAAATTCCA+TGG | - | chr8_1:34176746-34176765 | None:intergenic | 30.0% | |
| ! | CCATGGAATTTTGAATAATG+AGG | + | chr8_1:34176743-34176762 | Msa1190890:intron | 30.0% |
| !! | AATTTGTTGGGAGGAAAATT+TGG | + | chr8_1:34176780-34176799 | Msa1190890:intron | 30.0% |
| !!! | ATTTGGTGTGGTTGATTTTA+CGG | + | chr8_1:34176797-34176816 | Msa1190890:intron | 30.0% |
| ! | TTTTACGGTTCCATAAAACA+AGG | + | chr8_1:34176812-34176831 | Msa1190890:intron | 30.0% |
| AAAGAGAAAGAGATGATCAT+AGG | + | chr8_1:34176865-34176884 | Msa1190890:intron | 30.0% | |
| TGGATAAGTGTTTAAAAGTG+GGG | - | chr8_1:34176935-34176954 | None:intergenic | 30.0% | |
| CATGGATAAGTGTTTAAAAG+TGG | - | chr8_1:34176937-34176956 | None:intergenic | 30.0% | |
| ! | TTTTAACATATAGTGAGACG+GGG | + | chr8_1:34176981-34177000 | Msa1190890:intron | 30.0% |
| TACTATGGTACATTCAAGAT+TGG | - | chr8_1:34177127-34177146 | None:intergenic | 30.0% | |
| AAAGACAAATGAAATTCGAC+TGG | + | chr8_1:34177166-34177185 | Msa1190890:intron | 30.0% | |
| AGAAATAATAAGGACTTGAG+AGG | + | chr8_1:34177285-34177304 | Msa1190890:intron | 30.0% | |
| ! | CATTATTTTCACTATGCAAG+GGG | - | chr8_1:34177418-34177437 | None:intergenic | 30.0% |
| CTACAATACCATAAAAAGGA+TGG | - | chr8_1:34177492-34177511 | None:intergenic | 30.0% | |
| ATACAAAGTACAACATCTTG+AGG | - | chr8_1:34177525-34177544 | None:intergenic | 30.0% | |
| AATGGACATGTTACAAACAT+TGG | - | chr8_1:34177553-34177572 | None:intergenic | 30.0% | |
| AATGATGCTTTCATTTGCAA+TGG | - | chr8_1:34177571-34177590 | None:intergenic | 30.0% | |
| GAATTGTAAACTAAGGTAGA+AGG | - | chr8_1:34177645-34177664 | None:intergenic | 30.0% | |
| ACAACTGAATGCATCAATAA+AGG | - | chr8_1:34177752-34177771 | None:intergenic | 30.0% | |
| AAGTTGCAGAAAATAAATCC+AGG | - | chr8_1:34177779-34177798 | None:intergenic | 30.0% | |
| TCAATAACACAATTCCACTA+AGG | - | chr8_1:34177839-34177858 | None:intergenic | 30.0% | |
| CAATATAATTGACAACAGGT+CGG | - | chr8_1:34178101-34178120 | None:intergenic | 30.0% | |
| ATCTGTATAGGTAACAGAAA+TGG | + | chr8_1:34178255-34178274 | Msa1190890:intron | 30.0% | |
| TGGAAAACTAAGAAAATGGA+GGG | - | chr8_1:34178542-34178561 | None:intergenic | 30.0% | |
| ATGGAAAACTAAGAAAATGG+AGG | - | chr8_1:34178543-34178562 | None:intergenic | 30.0% | |
| !! | TTAGTTTTCCATTTCATTGC+AGG | + | chr8_1:34178551-34178570 | Msa1190890:intron | 30.0% |
| GTTTACCCTACATAGTTTAT+AGG | + | chr8_1:34178909-34178928 | Msa1190890:intron | 30.0% | |
| ! | TATCCCATTTTCCATTATTG+TGG | - | chr8_1:34179098-34179117 | None:intergenic | 30.0% |
| CAGATACTGTATGATACTAA+AGG | + | chr8_1:34179142-34179161 | Msa1190890:intron | 30.0% | |
| TTAGGGAAGTTTATAGAAAC+AGG | - | chr8_1:34179474-34179493 | None:intergenic | 30.0% | |
| GAGATTTATTAGCACTACTT+GGG | + | chr8_1:34179852-34179871 | Msa1190890:intron | 30.0% | |
| ! | TTTTCCAACAGTACACTTAA+CGG | + | chr8_1:34180004-34180023 | Msa1190890:intron | 30.0% |
| TCTAGTGTTATCTTCAAACT+TGG | + | chr8_1:34180045-34180064 | Msa1190890:intron | 30.0% | |
| ! | CATTTGTTGAGGTTAATCAT+AGG | + | chr8_1:34180087-34180106 | Msa1190890:intron | 30.0% |
| GTGTTCGTCAATATATAATG+TGG | - | chr8_1:34180131-34180150 | None:intergenic | 30.0% | |
| TTGGATTAAAGAAACACATC+TGG | + | chr8_1:34180245-34180264 | Msa1190890:intron | 30.0% | |
| TATTGTACCAACCGAAATAA+AGG | - | chr8_1:34180280-34180299 | None:intergenic | 30.0% | |
| ! | TTTTTATGTCTTTGCAATGG+TGG | - | chr8_1:34180408-34180427 | None:intergenic | 30.0% |
| !! | TTTGAAGTGATTTGTTGCAA+AGG | - | chr8_1:34180867-34180886 | None:intergenic | 30.0% |
| ! | ATAATGTGGGTTTTCTAACT+GGG | - | chr8_1:34180929-34180948 | None:intergenic | 30.0% |
| ! | TATAATGTGGGTTTTCTAAC+TGG | - | chr8_1:34180930-34180949 | None:intergenic | 30.0% |
| TAATTGTGATTGTTGAAAGG+AGG | + | chr8_1:34180951-34180970 | Msa1190890:intron | 30.0% | |
| ACCCTTTCACTTAAGAAATT+AGG | + | chr8_1:34181035-34181054 | Msa1190890:intron | 30.0% | |
| GGAGGAAAAAGATTGTAATT+AGG | + | chr8_1:34181167-34181186 | Msa1190890:intron | 30.0% | |
| ! | ATTAGTCTACAATGAAAACC+AGG | - | chr8_1:34181200-34181219 | None:intergenic | 30.0% |
| ! | ATGGAATTTGAAGCTAAATC+TGG | + | chr8_1:34181327-34181346 | Msa1190890:CDS | 30.0% |
| !!! | CTTGTAGTCTTGTTTTTGTT+AGG | + | chr8_1:34181435-34181454 | Msa1190890:intron | 30.0% |
| !! | TGTTTTTGTTAGGTATGATG+TGG | + | chr8_1:34181445-34181464 | Msa1190890:intron | 30.0% |
| CAAATGTCTGTATGATAGAA+AGG | - | chr8_1:34181474-34181493 | None:intergenic | 30.0% | |
| CTTTCTATCATACAGACATT+TGG | + | chr8_1:34181472-34181491 | Msa1190890:CDS | 30.0% | |
| AACCAGTATTAATCCTTTCT+CGG | - | chr8_1:34181547-34181566 | None:intergenic | 30.0% | |
| CCTTGATTGAAAATACTATC+AGG | - | chr8_1:34181598-34181617 | None:intergenic | 30.0% | |
| ! | CCTGATAGTATTTTCAATCA+AGG | + | chr8_1:34181595-34181614 | Msa1190890:intron | 30.0% |
| ! | GAAGTATTATGTAATGGTCA+TGG | + | chr8_1:34181748-34181767 | Msa1190890:intron | 30.0% |
| TTAATGTGCGAAAAAATGTC+AGG | + | chr8_1:34182037-34182056 | Msa1190890:CDS | 30.0% | |
| !!! | TGATCTCATACTTTGTTTTC+AGG | + | chr8_1:34182110-34182129 | Msa1190890:CDS | 30.0% |
| !!! | TCATACTTTGTTTTCAGGTT+GGG | + | chr8_1:34182115-34182134 | Msa1190890:intron | 30.0% |
| TTGATCTTTGACATTAAAGG+AGG | + | chr8_1:34182234-34182253 | Msa1190890:intron | 30.0% | |
| TGATCTTTGACATTAAAGGA+GGG | + | chr8_1:34182235-34182254 | Msa1190890:intron | 30.0% | |
| ! | TTGATTGTTACATTGCTGTT+TGG | + | chr8_1:34182421-34182440 | Msa1190890:intron | 30.0% |
| TGGAATGAATGCAAACTATA+GGG | - | chr8_1:34182467-34182486 | None:intergenic | 30.0% | |
| TTTATGACAAAATTACACCG+GGG | + | chr8_1:34182585-34182604 | Msa1190890:intron | 30.0% | |
| GAAACTTTGAACGAAGTTAT+AGG | - | chr8_1:34182613-34182632 | None:intergenic | 30.0% | |
| GATACGGAAAAAAAAGATAC+AGG | - | chr8_1:34182644-34182663 | None:intergenic | 30.0% | |
| !!! | GTATCTTTTTTTTCCGTATC+AGG | + | chr8_1:34182644-34182663 | Msa1190890:intron | 30.0% |
| TAAAAAAGACCAACCTGATA+CGG | - | chr8_1:34182660-34182679 | None:intergenic | 30.0% | |
| TCTAAAAACGTTAATGGTGT+TGG | + | chr8_1:34182700-34182719 | Msa1190890:intron | 30.0% | |
| ! | TGTCAACAAGGTTCTAATTA+TGG | + | chr8_1:34182860-34182879 | Msa1190890:intron | 30.0% |
| TACGTACACAAATTTGTAAG+AGG | + | chr8_1:34182926-34182945 | Msa1190890:intron | 30.0% | |
| TAAACTAAGTTAAAGGAACC+TGG | + | chr8_1:34183047-34183066 | Msa1190890:intron | 30.0% | |
| GAAATCCTTCATGAAAAGTA+GGG | - | chr8_1:34183143-34183162 | None:intergenic | 30.0% | |
| ! | ACAATGGAAATTTGGGATTT+AGG | - | chr8_1:34183217-34183236 | None:intergenic | 30.0% |
| TATTCTTCATTTCCTGTGTA+AGG | - | chr8_1:34183265-34183284 | None:intergenic | 30.0% | |
| AGCCTAGTCATAAATCATTT+AGG | - | chr8_1:34183306-34183325 | None:intergenic | 30.0% | |
| ! | TGACATGATACTGCTATTTA+AGG | + | chr8_1:34183429-34183448 | Msa1190890:intron | 30.0% |
| ! | GACATGATACTGCTATTTAA+GGG | + | chr8_1:34183430-34183449 | Msa1190890:intron | 30.0% |
| TGTAATCTGTAATCAGTTTC+AGG | - | chr8_1:34183538-34183557 | None:intergenic | 30.0% | |
| GAAACATTTGTTTGCAAAAC+AGG | - | chr8_1:34183709-34183728 | None:intergenic | 30.0% | |
| ! | ATATTCAAGTTACTTCCCTT+CGG | - | chr8_1:34183881-34183900 | None:intergenic | 30.0% |
| ! | TTTTTCCAAACCCTAGAATT+TGG | + | chr8_1:34183935-34183954 | Msa1190890:three_prime_UTR | 30.0% |
| !! | ATATACCAAATTCTAGGGTT+TGG | - | chr8_1:34183943-34183962 | None:intergenic | 30.0% |
| AAGGCATATACCAAATTCTA+GGG | - | chr8_1:34183948-34183967 | None:intergenic | 30.0% | |
| ! | AAAGGCATATACCAAATTCT+AGG | - | chr8_1:34183949-34183968 | None:intergenic | 30.0% |
| TGAACTATGGGAATTGAAAA+GGG | + | chr8_1:34184043-34184062 | Msa1190890:three_prime_UTR | 30.0% | |
| GCTGTCAAAAAAATAAAGAG+AGG | - | chr8_1:34184077-34184096 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGATGTTGGAGAA+AGG | - | chr8_1:34176346-34176365 | None:intergenic | 35.0% |
| AAGAGTGGAATTGAATACCT+CGG | - | chr8_1:34176441-34176460 | None:intergenic | 35.0% | |
| AATATATCTGTTTATGCCGC+GGG | - | chr8_1:34176555-34176574 | None:intergenic | 35.0% | |
| GAATATATCTGTTTATGCCG+CGG | - | chr8_1:34176556-34176575 | None:intergenic | 35.0% | |
| ! | CGTTTTGTAACTGTGAAAAG+AGG | + | chr8_1:34176620-34176639 | Msa1190890:intron | 35.0% |
| ACACTCACTTTCGAAATGTA+TGG | + | chr8_1:34176653-34176672 | Msa1190890:intron | 35.0% | |
| CACTCACTTTCGAAATGTAT+GGG | + | chr8_1:34176654-34176673 | Msa1190890:intron | 35.0% | |
| CACTTTGGATGAAATTCATG+TGG | - | chr8_1:34176701-34176720 | None:intergenic | 35.0% | |
| ! | ACCATTGCACGAAATTTGTT+GGG | + | chr8_1:34176768-34176787 | Msa1190890:intron | 35.0% |
| TTCCATAAAACAAGGAGGAA+GGG | + | chr8_1:34176820-34176839 | Msa1190890:intron | 35.0% | |
| AGAAAGAGATGATCATAGGT+GGG | + | chr8_1:34176869-34176888 | Msa1190890:intron | 35.0% | |
| GGATAAGTGTTTAAAAGTGG+GGG | - | chr8_1:34176934-34176953 | None:intergenic | 35.0% | |
| ACACTATTAGAGTCAAGTGT+AGG | - | chr8_1:34177247-34177266 | None:intergenic | 35.0% | |
| ! | TCAACTGTTTTCAATTCCTC+TGG | + | chr8_1:34177447-34177466 | Msa1190890:intron | 35.0% |
| !!! | TTTTTGTGTTGCTTGCTGAA+TGG | + | chr8_1:34177593-34177612 | Msa1190890:intron | 35.0% |
| !!! | TTTTGTGTTGCTTGCTGAAT+GGG | + | chr8_1:34177594-34177613 | Msa1190890:intron | 35.0% |
| AGCACCTACATGAATCATTT+GGG | + | chr8_1:34177707-34177726 | Msa1190890:intron | 35.0% | |
| CCACTAAGGATTTAAACTTC+TGG | - | chr8_1:34177825-34177844 | None:intergenic | 35.0% | |
| CCAGAAGTTTAAATCCTTAG+TGG | + | chr8_1:34177822-34177841 | Msa1190890:intron | 35.0% | |
| AAAATCAAGACACGCTAACT+GGG | - | chr8_1:34177901-34177920 | None:intergenic | 35.0% | |
| AAAAATCAAGACACGCTAAC+TGG | - | chr8_1:34177902-34177921 | None:intergenic | 35.0% | |
| TGTAATCTTGCCTTTACGAT+CGG | - | chr8_1:34178464-34178483 | None:intergenic | 35.0% | |
| GATTACAGTACAGATGAAAC+AGG | + | chr8_1:34178477-34178496 | Msa1190890:CDS | 35.0% | |
| TTTCCATTTCATTGCAGGTA+TGG | + | chr8_1:34178556-34178575 | Msa1190890:intron | 35.0% | |
| ATTCCATACCTGCAATGAAA+TGG | - | chr8_1:34178562-34178581 | None:intergenic | 35.0% | |
| TTTCATTGCAGGTATGGAAT+TGG | + | chr8_1:34178562-34178581 | Msa1190890:intron | 35.0% | |
| GCTTCAGGTAGAATGTTATT+AGG | + | chr8_1:34178726-34178745 | Msa1190890:intron | 35.0% | |
| GTAGGGTAAACTAAACAGAT+TGG | - | chr8_1:34178900-34178919 | None:intergenic | 35.0% | |
| CTAGCCCTATAAACTATGTA+GGG | - | chr8_1:34178917-34178936 | None:intergenic | 35.0% | |
| TCTAGCCCTATAAACTATGT+AGG | - | chr8_1:34178918-34178937 | None:intergenic | 35.0% | |
| AAAGTGGAACATAGAGTTGT+GGG | - | chr8_1:34179041-34179060 | None:intergenic | 35.0% | |
| AAAAGTGGAACATAGAGTTG+TGG | - | chr8_1:34179042-34179061 | None:intergenic | 35.0% | |
| ACAACAACCAATATCTGGAT+TGG | + | chr8_1:34179223-34179242 | Msa1190890:intron | 35.0% | |
| !! | ACCAATATCTGGATTGGTTT+CGG | + | chr8_1:34179229-34179248 | Msa1190890:intron | 35.0% |
| ! | GAAGTAAATTTTCCCTCTCT+AGG | + | chr8_1:34179300-34179319 | Msa1190890:intron | 35.0% |
| !! | GAGGGTATCTATTGTTTGTA+GGG | - | chr8_1:34179355-34179374 | None:intergenic | 35.0% |
| GGTTATAAGTGTGAAAACAG+AGG | - | chr8_1:34179382-34179401 | None:intergenic | 35.0% | |
| !! | TAAGTCACTGTAGCTTTAGT+TGG | - | chr8_1:34179403-34179422 | None:intergenic | 35.0% |
| AGCTACAGTGACTTACTAAA+TGG | + | chr8_1:34179408-34179427 | Msa1190890:intron | 35.0% | |
| GGAAATCCAACAACACATAT+AGG | + | chr8_1:34179730-34179749 | Msa1190890:intron | 35.0% | |
| GTCTATCCTATATGTGTTGT+TGG | - | chr8_1:34179739-34179758 | None:intergenic | 35.0% | |
| ! | GTTGAGCACAAACTCTAAAA+TGG | - | chr8_1:34179769-34179788 | None:intergenic | 35.0% |
| CGAGATTTATTAGCACTACT+TGG | + | chr8_1:34179851-34179870 | Msa1190890:intron | 35.0% | |
| TTTCCAACAGTACACTTAAC+GGG | + | chr8_1:34180005-34180024 | Msa1190890:intron | 35.0% | |
| ! | GAGTATGTTGACATTTGTTG+AGG | + | chr8_1:34180076-34180095 | Msa1190890:intron | 35.0% |
| GAAGTAGAACCTGAATTTGT+TGG | + | chr8_1:34180214-34180233 | Msa1190890:intron | 35.0% | |
| ATACCATCACCAACAAATTC+AGG | - | chr8_1:34180226-34180245 | None:intergenic | 35.0% | |
| !! | GAATTTGTTGGTGATGGTAT+TGG | + | chr8_1:34180226-34180245 | Msa1190890:intron | 35.0% |
| ! | CTATCTGAGATTAACAACAC+AGG | - | chr8_1:34180336-34180355 | None:intergenic | 35.0% |
| ! | GTGTTGTTAATCTCAGATAG+TGG | + | chr8_1:34180336-34180355 | Msa1190890:intron | 35.0% |
| ! | CTATACCACTATAGCAGTTT+TGG | - | chr8_1:34180378-34180397 | None:intergenic | 35.0% |
| !! | CCAAAATTGTTTCTGTGATG+CGG | - | chr8_1:34180991-34181010 | None:intergenic | 35.0% |
| ! | CGCATCACAGAAACAATTTT+GGG | + | chr8_1:34180989-34181008 | Msa1190890:intron | 35.0% |
| CAAAAACAAGACTACAAGTC+AGG | - | chr8_1:34181433-34181452 | None:intergenic | 35.0% | |
| TCATTCTTAAGTTCCGAGAA+AGG | + | chr8_1:34181531-34181550 | Msa1190890:intron | 35.0% | |
| TTCCGAGAAAGGATTAATAC+TGG | + | chr8_1:34181542-34181561 | Msa1190890:intron | 35.0% | |
| TGAAAATACTATCAGGGCAA+AGG | - | chr8_1:34181591-34181610 | None:intergenic | 35.0% | |
| GTATTATGTAATGGTCATGG+AGG | + | chr8_1:34181751-34181770 | Msa1190890:intron | 35.0% | |
| GACAAAACTCAAGACAACTA+TGG | - | chr8_1:34181847-34181866 | None:intergenic | 35.0% | |
| ATTAATCCACTCATCTTCCT+CGG | - | chr8_1:34182022-34182041 | None:intergenic | 35.0% | |
| ACACATTCTGATGATTCACA+TGG | - | chr8_1:34182075-34182094 | None:intergenic | 35.0% | |
| AACAAAGTATGAGATCACCA+GGG | - | chr8_1:34182107-34182126 | None:intergenic | 35.0% | |
| AAACAAAGTATGAGATCACC+AGG | - | chr8_1:34182108-34182127 | None:intergenic | 35.0% | |
| !!! | CTCATACTTTGTTTTCAGGT+TGG | + | chr8_1:34182114-34182133 | Msa1190890:intron | 35.0% |
| CTGGAATGAATGCAAACTAT+AGG | - | chr8_1:34182468-34182487 | None:intergenic | 35.0% | |
| AAAACTATGGGGATCAAAAC+TGG | - | chr8_1:34182487-34182506 | None:intergenic | 35.0% | |
| AGAACTGAACCTTGAAATCA+GGG | - | chr8_1:34182559-34182578 | None:intergenic | 35.0% | |
| AAGAACTGAACCTTGAAATC+AGG | - | chr8_1:34182560-34182579 | None:intergenic | 35.0% | |
| TTATGACAAAATTACACCGG+GGG | + | chr8_1:34182586-34182605 | Msa1190890:intron | 35.0% | |
| CTTCGTTCAAAGTTTCAAAC+AGG | + | chr8_1:34182617-34182636 | Msa1190890:intron | 35.0% | |
| !!! | CTTTTTTTTCCGTATCAGGT+TGG | + | chr8_1:34182648-34182667 | Msa1190890:intron | 35.0% |
| TTAGAACCTTGTTGACAACA+AGG | - | chr8_1:34182857-34182876 | None:intergenic | 35.0% | |
| GGAAATCCTTCATGAAAAGT+AGG | - | chr8_1:34183144-34183163 | None:intergenic | 35.0% | |
| ! | GGAAATTTGGGATTTAGGTT+TGG | - | chr8_1:34183212-34183231 | None:intergenic | 35.0% |
| !! | ACAATGGTGTCATTTGAAAG+AGG | + | chr8_1:34183348-34183367 | Msa1190890:intron | 35.0% |
| ! | GGTTACTAATCCTTCTGAAA+TGG | + | chr8_1:34183642-34183661 | Msa1190890:CDS | 35.0% |
| !!! | TGCTGTTTTGTCTGAACTAT+GGG | + | chr8_1:34184031-34184050 | Msa1190890:three_prime_UTR | 35.0% |
| CTGAACTATGGGAATTGAAA+AGG | + | chr8_1:34184042-34184061 | Msa1190890:three_prime_UTR | 35.0% | |
| !! | GGTGTTGTTGTTGTTGATGT+TGG | - | chr8_1:34176353-34176372 | None:intergenic | 40.0% |
| AGAGTGGAATTGAATACCTC+GGG | - | chr8_1:34176440-34176459 | None:intergenic | 40.0% | |
| AAAATTCCATGGTTCCCTAC+TGG | - | chr8_1:34176735-34176754 | None:intergenic | 40.0% | |
| CACCATTGCACGAAATTTGT+TGG | + | chr8_1:34176767-34176786 | Msa1190890:intron | 40.0% | |
| TCCCAACAAATTTCGTGCAA+TGG | - | chr8_1:34176772-34176791 | None:intergenic | 40.0% | |
| !! | ATTGCACGAAATTTGTTGGG+AGG | + | chr8_1:34176771-34176790 | Msa1190890:intron | 40.0% |
| TACGGTTCCATAAAACAAGG+AGG | + | chr8_1:34176815-34176834 | Msa1190890:intron | 40.0% | |
| GTTCCATAAAACAAGGAGGA+AGG | + | chr8_1:34176819-34176838 | Msa1190890:intron | 40.0% | |
| !!! | AACCCTTCCTCCTTGTTTTA+TGG | - | chr8_1:34176825-34176844 | None:intergenic | 40.0% |
| GAGAAAGAGATGATCATAGG+TGG | + | chr8_1:34176868-34176887 | Msa1190890:intron | 40.0% | |
| ! | CAAGATTGGTTAAGTTGCCT+GGG | - | chr8_1:34177113-34177132 | None:intergenic | 40.0% |
| ! | TCAAGATTGGTTAAGTTGCC+TGG | - | chr8_1:34177114-34177133 | None:intergenic | 40.0% |
| GACAAATGAAATTCGACTGG+TGG | + | chr8_1:34177169-34177188 | Msa1190890:intron | 40.0% | |
| AACTACACCTAGATTGAAGC+TGG | - | chr8_1:34177362-34177381 | None:intergenic | 40.0% | |
| !!! | CGGAGTATTTTGATTTCCAG+AGG | - | chr8_1:34177466-34177485 | None:intergenic | 40.0% |
| TACCATAAAAAGGATGGCTG+CGG | - | chr8_1:34177486-34177505 | None:intergenic | 40.0% | |
| ACTAAGGTAGAAGGATGAGA+AGG | - | chr8_1:34177636-34177655 | None:intergenic | 40.0% | |
| ! | ACAAGTTGAAGTCACGGAAA+AGG | - | chr8_1:34177680-34177699 | None:intergenic | 40.0% |
| ! | GTCTACACAAGTTGAAGTCA+CGG | - | chr8_1:34177686-34177705 | None:intergenic | 40.0% |
| CAAATGATTCATGTAGGTGC+TGG | - | chr8_1:34177708-34177727 | None:intergenic | 40.0% | |
| CAGCACCTACATGAATCATT+TGG | + | chr8_1:34177706-34177725 | Msa1190890:intron | 40.0% | |
| GCACCTACATGAATCATTTG+GGG | + | chr8_1:34177708-34177727 | Msa1190890:intron | 40.0% | |
| CACCTACATGAATCATTTGG+GGG | + | chr8_1:34177709-34177728 | Msa1190890:intron | 40.0% | |
| TTCCCCCAAATGATTCATGT+AGG | - | chr8_1:34177714-34177733 | None:intergenic | 40.0% | |
| CAAAGATGAAGGTCTGATAG+AGG | - | chr8_1:34177947-34177966 | None:intergenic | 40.0% | |
| ! | GCTAAGTTGGACAAAGATGA+AGG | - | chr8_1:34177958-34177977 | None:intergenic | 40.0% |
| AAGCACTTGCAGACAAGTTT+AGG | + | chr8_1:34178329-34178348 | Msa1190890:CDS | 40.0% | |
| GTAATCTTGCCTTTACGATC+GGG | - | chr8_1:34178463-34178482 | None:intergenic | 40.0% | |
| ! | GGCGTGATATTTAACTTTGC+AGG | - | chr8_1:34178633-34178652 | None:intergenic | 40.0% |
| TTGAGTCATTATCCTTCCTG+GGG | - | chr8_1:34178676-34178695 | None:intergenic | 40.0% | |
| GTTGAGTCATTATCCTTCCT+GGG | - | chr8_1:34178677-34178696 | None:intergenic | 40.0% | |
| AACATTCTACCTGAAGCTGA+AGG | - | chr8_1:34178723-34178742 | None:intergenic | 40.0% | |
| CAAGAAACGACACAGTGATA+TGG | - | chr8_1:34178847-34178866 | None:intergenic | 40.0% | |
| !! | CATATCACTGTGTCGTTTCT+TGG | + | chr8_1:34178845-34178864 | Msa1190890:intron | 40.0% |
| CTTGTGGTGCATTATGAGTA+AGG | + | chr8_1:34178979-34178998 | Msa1190890:intron | 40.0% | |
| AAGTGGAACATAGAGTTGTG+GGG | - | chr8_1:34179040-34179059 | None:intergenic | 40.0% | |
| AATAGAACTGGTCCAGAATC+AGG | + | chr8_1:34179177-34179196 | Msa1190890:intron | 40.0% | |
| CAGCTACAACAACCAATATC+TGG | + | chr8_1:34179218-34179237 | Msa1190890:intron | 40.0% | |
| TCCGAAACCAATCCAGATAT+TGG | - | chr8_1:34179233-34179252 | None:intergenic | 40.0% | |
| !! | CTCTCTGAAATACCTAGAGA+GGG | - | chr8_1:34179315-34179334 | None:intergenic | 40.0% |
| !! | CGAGGGTATCTATTGTTTGT+AGG | - | chr8_1:34179356-34179375 | None:intergenic | 40.0% |
| TGTGAAAACAGAGGAATCGA+GGG | - | chr8_1:34179373-34179392 | None:intergenic | 40.0% | |
| TTAGGTCATATTTACAGGCG+AGG | + | chr8_1:34179534-34179553 | Msa1190890:intron | 40.0% | |
| ! | TCATTGATGTCAAAGGCATG+AGG | - | chr8_1:34179577-34179596 | None:intergenic | 40.0% |
| CATGCCTTTGACATCAATGA+AGG | + | chr8_1:34179577-34179596 | Msa1190890:intron | 40.0% | |
| AGCACCTTCATTGATGTCAA+AGG | - | chr8_1:34179584-34179603 | None:intergenic | 40.0% | |
| ! | TTTGACATCAATGAAGGTGC+TGG | + | chr8_1:34179583-34179602 | Msa1190890:intron | 40.0% |
| ! | CCCTTAATTGCAGCACTTTT+GGG | - | chr8_1:34179627-34179646 | None:intergenic | 40.0% |
| !! | CCCAAAAGTGCTGCAATTAA+GGG | + | chr8_1:34179624-34179643 | Msa1190890:intron | 40.0% |
| !! | CCAAAAGTGCTGCAATTAAG+GGG | + | chr8_1:34179625-34179644 | Msa1190890:intron | 40.0% |
| GCCTTAATTGCAGCAACTTT+GGG | - | chr8_1:34179960-34179979 | None:intergenic | 40.0% | |
| AGCCTTAATTGCAGCAACTT+TGG | - | chr8_1:34179961-34179980 | None:intergenic | 40.0% | |
| !! | GAACCTGAATTTGTTGGTGA+TGG | + | chr8_1:34180220-34180239 | Msa1190890:intron | 40.0% |
| !!! | ACTATAGCAGTTTTGGTGTC+CGG | - | chr8_1:34180371-34180390 | None:intergenic | 40.0% |
| ! | CCGCATCACAGAAACAATTT+TGG | + | chr8_1:34180988-34181007 | Msa1190890:intron | 40.0% |
| TAAGTGAAAGGGTTCCACTT+CGG | - | chr8_1:34181028-34181047 | None:intergenic | 40.0% | |
| GAGAAAAGAGCTGTATTGTG+CGG | + | chr8_1:34181091-34181110 | Msa1190890:intron | 40.0% | |
| ! | ATTCAGAAGTAGCGGTTTTG+CGG | - | chr8_1:34181137-34181156 | None:intergenic | 40.0% |
| AAAACCGCTACTTCTGAATG+CGG | + | chr8_1:34181138-34181157 | Msa1190890:intron | 40.0% | |
| ! | GCTGTTGTTTGAACTGTGTA+CGG | - | chr8_1:34181282-34181301 | None:intergenic | 40.0% |
| CACAGTTCAAACAACAGCAA+AGG | + | chr8_1:34181284-34181303 | Msa1190890:intron | 40.0% | |
| AGTTCAAACAACAGCAAAGG+CGG | + | chr8_1:34181287-34181306 | Msa1190890:intron | 40.0% | |
| GGCTCCTGAAAATTCAGTTA+TGG | + | chr8_1:34181308-34181327 | Msa1190890:CDS | 40.0% | |
| GAAGCTAAATCTGGAAGAGA+TGG | + | chr8_1:34181336-34181355 | Msa1190890:CDS | 40.0% | |
| AGGACATCTCAATGTTAGAC+AGG | - | chr8_1:34181637-34181656 | None:intergenic | 40.0% | |
| GTTTCTCACTTCTCAGTTTC+CGG | + | chr8_1:34181805-34181824 | Msa1190890:intron | 40.0% | |
| AGTTTCCGGTCATTCATTCA+TGG | + | chr8_1:34181819-34181838 | Msa1190890:intron | 40.0% | |
| !! | TGGCTTTGTAGACCATGTAA+TGG | + | chr8_1:34181942-34181961 | Msa1190890:intron | 40.0% |
| GACATGGGCATCAAAGTAAA+GGG | - | chr8_1:34182272-34182291 | None:intergenic | 40.0% | |
| TCTTTGAGCATCAAGGACAT+GGG | - | chr8_1:34182287-34182306 | None:intergenic | 40.0% | |
| ATGTCCTTGATGCTCAAAGA+CGG | + | chr8_1:34182287-34182306 | Msa1190890:CDS | 40.0% | |
| ! | AGGTTGTCGCTGTAGATTTT+TGG | + | chr8_1:34182324-34182343 | Msa1190890:CDS | 40.0% |
| CTATGATCACGATCAATCTG+AGG | + | chr8_1:34182351-34182370 | Msa1190890:CDS | 40.0% | |
| ! | TTGTGACCTTGTTGTCAACA+AGG | + | chr8_1:34182848-34182867 | Msa1190890:intron | 40.0% |
| GTTCTAATTATGGAGCTGAG+TGG | + | chr8_1:34182870-34182889 | Msa1190890:intron | 40.0% | |
| !! | TTGAGCCCTACTTTTCATGA+AGG | + | chr8_1:34183135-34183154 | Msa1190890:intron | 40.0% |
| ATGGTCATCATTCCTTACAC+AGG | + | chr8_1:34183250-34183269 | Msa1190890:intron | 40.0% | |
| GTCAGTCTATTGCTTCACAA+TGG | + | chr8_1:34183332-34183351 | Msa1190890:intron | 40.0% | |
| !! | ACATATTCTGTGGTTTTGCC+AGG | + | chr8_1:34183480-34183499 | Msa1190890:intron | 40.0% |
| GATCATCCAGCAAATGTTCA+TGG | + | chr8_1:34183613-34183632 | Msa1190890:CDS | 40.0% | |
| ! | TGCTTTTGCACCATTTCAGA+AGG | - | chr8_1:34183655-34183674 | None:intergenic | 40.0% |
| ACCACCACAAAGTATGAATG+TGG | + | chr8_1:34183732-34183751 | Msa1190890:CDS | 40.0% | |
| TCCACATTCATACTTTGTGG+TGG | - | chr8_1:34183736-34183755 | None:intergenic | 40.0% | |
| GGATCCACATTCATACTTTG+TGG | - | chr8_1:34183739-34183758 | None:intergenic | 40.0% | |
| !! | GCTTTTGTTTCAGCTTTCGT+TGG | - | chr8_1:34183760-34183779 | None:intergenic | 40.0% |
| ACAAAAGCTGATGTTCAAGC+TGG | + | chr8_1:34183772-34183791 | Msa1190890:CDS | 40.0% | |
| !!! | AGGTTTTGAGTAGAGACTTC+AGG | - | chr8_1:34183856-34183875 | None:intergenic | 40.0% |
| TGAAGTCTCTACTCAAAACC+TGG | + | chr8_1:34183855-34183874 | Msa1190890:CDS | 40.0% | |
| !!! | CTGCTGTTTTGTCTGAACTA+TGG | + | chr8_1:34184030-34184049 | Msa1190890:three_prime_UTR | 40.0% |
| GAATCAAGCAAAACCAGCGA+GGG | + | chr8_1:34176286-34176305 | Msa1190890:five_prime_UTR | 45.0% | |
| TGAATGAATGAAACCCTCGC+TGG | - | chr8_1:34176302-34176321 | None:intergenic | 45.0% | |
| ACCACACATCTCTCTGTTGA+TGG | + | chr8_1:34176370-34176389 | Msa1190890:exon | 45.0% | |
| CCACACATCTCTCTGTTGAT+GGG | + | chr8_1:34176371-34176390 | Msa1190890:exon | 45.0% | |
| TATCGTTATGTCTGAACCCG+CGG | + | chr8_1:34176536-34176555 | Msa1190890:intron | 45.0% | |
| TGTATGGGTCCCACATAAAG+TGG | + | chr8_1:34176669-34176688 | Msa1190890:intron | 45.0% | |
| TGGATCCCACCACTTTATGT+GGG | - | chr8_1:34176681-34176700 | None:intergenic | 45.0% | |
| ! | GTTGGGAGGAAAATTTGGTG+TGG | + | chr8_1:34176785-34176804 | Msa1190890:intron | 45.0% |
| ! | ACATCGGTTGAGAGATGACA+TGG | - | chr8_1:34176955-34176974 | None:intergenic | 45.0% |
| ! | TTAAGTTGCCTGGGTGCATA+AGG | - | chr8_1:34177104-34177123 | None:intergenic | 45.0% |
| TCTGCTTCCAGCTTCAATCT+AGG | + | chr8_1:34177352-34177371 | Msa1190890:intron | 45.0% | |
| ATGCATTCAGTTGTGTCACC+TGG | + | chr8_1:34177758-34177777 | Msa1190890:intron | 45.0% | |
| ! | GGCATCAGTGATGTTTCTGT+TGG | - | chr8_1:34177869-34177888 | None:intergenic | 45.0% |
| ACACGCTAACTGGGTAGAAA+CGG | - | chr8_1:34177892-34177911 | None:intergenic | 45.0% | |
| !! | GTGTCACTTGTGAGCTAAGT+TGG | - | chr8_1:34177971-34177990 | None:intergenic | 45.0% |
| AGTGAATCACCCGATCGTAA+AGG | + | chr8_1:34178451-34178470 | Msa1190890:intron | 45.0% | |
| TAAATATCACGCCCATGCCT+CGG | + | chr8_1:34178640-34178659 | Msa1190890:CDS | 45.0% | |
| GGTTGAGTCATTATCCTTCC+TGG | - | chr8_1:34178678-34178697 | None:intergenic | 45.0% | |
| CTGGTCCAGAATCAGGTAAA+TGG | + | chr8_1:34179184-34179203 | Msa1190890:intron | 45.0% | |
| CTACGCCATTTACCTGATTC+TGG | - | chr8_1:34179192-34179211 | None:intergenic | 45.0% | |
| !! | GCTCTCTGAAATACCTAGAG+AGG | - | chr8_1:34179316-34179335 | None:intergenic | 45.0% |
| GTGTGAAAACAGAGGAATCG+AGG | - | chr8_1:34179374-34179393 | None:intergenic | 45.0% | |
| TTCCCTAATTGTAAGGCGAG+AGG | + | chr8_1:34179486-34179505 | Msa1190890:intron | 45.0% | |
| GTCCTCTCGCCTTACAATTA+GGG | - | chr8_1:34179491-34179510 | None:intergenic | 45.0% | |
| AGTCCTCTCGCCTTACAATT+AGG | - | chr8_1:34179492-34179511 | None:intergenic | 45.0% | |
| GTCATATTTACAGGCGAGGT+AGG | + | chr8_1:34179538-34179557 | Msa1190890:intron | 45.0% | |
| !! | GCCCAAAAGTGCTGCAATTA+AGG | + | chr8_1:34179623-34179642 | Msa1190890:intron | 45.0% |
| ! | CCCCTTAATTGCAGCACTTT+TGG | - | chr8_1:34179628-34179647 | None:intergenic | 45.0% |
| ! | AAGTGCTGCAATTAAGGGGT+AGG | + | chr8_1:34179629-34179648 | Msa1190890:intron | 45.0% |
| AGTGCTGCAATTAAGGGGTA+GGG | + | chr8_1:34179630-34179649 | Msa1190890:intron | 45.0% | |
| GTAGGGGAGGATTGCAATTA+AGG | + | chr8_1:34179647-34179666 | Msa1190890:intron | 45.0% | |
| ACTACTTGGGCCATATCTCT+AGG | + | chr8_1:34179865-34179884 | Msa1190890:intron | 45.0% | |
| TACCACATCGCCTAGAGATA+TGG | - | chr8_1:34179878-34179897 | None:intergenic | 45.0% | |
| CCTTCATTGTGTTGGGTGAA+TGG | - | chr8_1:34179913-34179932 | None:intergenic | 45.0% | |
| CCATTCACCCAACACAATGA+AGG | + | chr8_1:34179910-34179929 | Msa1190890:intron | 45.0% | |
| TCCAGCACCTTCATTGTGTT+GGG | - | chr8_1:34179920-34179939 | None:intergenic | 45.0% | |
| GCCCAAAGTTGCTGCAATTA+AGG | + | chr8_1:34179956-34179975 | Msa1190890:intron | 45.0% | |
| !!! | AACGGGCTGGAAACTGTTTT+AGG | + | chr8_1:34180022-34180041 | Msa1190890:intron | 45.0% |
| ! | GGCTGCTCTGTCCTTTATTT+CGG | + | chr8_1:34180266-34180285 | Msa1190890:intron | 45.0% |
| ! | GCTCTGTCCTTTATTTCGGT+TGG | + | chr8_1:34180270-34180289 | Msa1190890:intron | 45.0% |
| ! | TTCGGTTGGTACAATACTGC+TGG | + | chr8_1:34180284-34180303 | Msa1190890:intron | 45.0% |
| ! | TCGGTTGGTACAATACTGCT+GGG | + | chr8_1:34180285-34180304 | Msa1190890:intron | 45.0% |
| ! | GTTAATCTCAGATAGTGGCG+CGG | + | chr8_1:34180341-34180360 | Msa1190890:intron | 45.0% |
| GGACACCAAAACTGCTATAG+TGG | + | chr8_1:34180370-34180389 | Msa1190890:intron | 45.0% | |
| GAAATGTTAACTAGTGCCCC+CGG | + | chr8_1:34180676-34180695 | Msa1190890:intron | 45.0% | |
| AAATGTTAACTAGTGCCCCC+GGG | + | chr8_1:34180677-34180696 | Msa1190890:intron | 45.0% | |
| AAGTGAAAGGGTTCCACTTC+GGG | - | chr8_1:34181027-34181046 | None:intergenic | 45.0% | |
| AATCTGGAAGAGATGGAGCA+TGG | + | chr8_1:34181343-34181362 | Msa1190890:CDS | 45.0% | |
| ACATTTGGAGAGCAGTGATC+CGG | + | chr8_1:34181487-34181506 | Msa1190890:CDS | 45.0% | |
| TGGCACCATGAATGAATGAC+CGG | - | chr8_1:34181827-34181846 | None:intergenic | 45.0% | |
| CACTAGCACTTCCTGAAACA+TGG | - | chr8_1:34181980-34181999 | None:intergenic | 45.0% | |
| !!! | CTAGTGCGTTTTGCTGGTTT+TGG | + | chr8_1:34181994-34182013 | Msa1190890:CDS | 45.0% |
| !!! | TTTTGCTGGTTTTGGATCCG+AGG | + | chr8_1:34182002-34182021 | Msa1190890:CDS | 45.0% |
| GGACATGGGCATCAAAGTAA+AGG | - | chr8_1:34182273-34182292 | None:intergenic | 45.0% | |
| GTCTTTGAGCATCAAGGACA+TGG | - | chr8_1:34182288-34182307 | None:intergenic | 45.0% | |
| !! | GGATTGGTTCCCTGATTTCA+AGG | + | chr8_1:34182547-34182566 | Msa1190890:intron | 45.0% |
| ! | TGCCGCTTAGGAAGATTTGT+CGG | + | chr8_1:34183509-34183528 | Msa1190890:CDS | 45.0% |
| CTCCGACAAATCTTCCTAAG+CGG | - | chr8_1:34183514-34183533 | None:intergenic | 45.0% | |
| AGCAAATGTTCATGGTGCGA+GGG | + | chr8_1:34183621-34183640 | Msa1190890:CDS | 45.0% | |
| AATGATTCCAGTGAATGCGG+CGG | - | chr8_1:34183818-34183837 | None:intergenic | 45.0% | |
| GGCAATGATTCCAGTGAATG+CGG | - | chr8_1:34183821-34183840 | None:intergenic | 45.0% | |
| GAGTAGAGACTTCAGGAACA+CGG | - | chr8_1:34183849-34183868 | None:intergenic | 45.0% | |
| GGAAAAATGAACCCCACAGA+AGG | - | chr8_1:34183922-34183941 | None:intergenic | 45.0% | |
| !!! | TTTATATATCTTATTTTTTA+TGG | - | chr8_1:34180530-34180549 | None:intergenic | 5.0% |
| !! | AATAAATGAAAAAAAAATAA+GGG | - | chr8_1:34182526-34182545 | None:intergenic | 5.0% |
| !! | AAATAAATGAAAAAAAAATA+AGG | - | chr8_1:34182527-34182546 | None:intergenic | 5.0% |
| !!! | TTATTTTTTTTTCATTTATT+TGG | + | chr8_1:34182526-34182545 | Msa1190890:intron | 5.0% |
| CGAATCAAGCAAAACCAGCG+AGG | + | chr8_1:34176285-34176304 | Msa1190890:five_prime_UTR | 50.0% | |
| CCCATCAACAGAGAGATGTG+TGG | - | chr8_1:34176374-34176393 | None:intergenic | 50.0% | |
| ATACCTCGGGCTGAGTGAAA+CGG | - | chr8_1:34176427-34176446 | None:intergenic | 50.0% | |
| ATGGGTCCCACATAAAGTGG+TGG | + | chr8_1:34176672-34176691 | Msa1190890:intron | 50.0% | |
| TGGGTCCCACATAAAGTGGT+GGG | + | chr8_1:34176673-34176692 | Msa1190890:intron | 50.0% | |
| GTGGATCCCACCACTTTATG+TGG | - | chr8_1:34176682-34176701 | None:intergenic | 50.0% | |
| CTGGTTGGGAACACTCACTT+TGG | - | chr8_1:34176716-34176735 | None:intergenic | 50.0% | |
| AGTGAGTGTTCCCAACCAGT+AGG | + | chr8_1:34176717-34176736 | Msa1190890:intron | 50.0% | |
| GTGAGTGTTCCCAACCAGTA+GGG | + | chr8_1:34176718-34176737 | Msa1190890:intron | 50.0% | |
| ! | TCCATGGTTCCCTACTGGTT+GGG | - | chr8_1:34176730-34176749 | None:intergenic | 50.0% |
| TTCCATGGTTCCCTACTGGT+TGG | - | chr8_1:34176731-34176750 | None:intergenic | 50.0% | |
| AGGACTTGAGAGGAAGAGCT+TGG | + | chr8_1:34177295-34177314 | Msa1190890:intron | 50.0% | |
| ! | CTCCGCAGCCATCCTTTTTA+TGG | + | chr8_1:34177481-34177500 | Msa1190890:intron | 50.0% |
| ACGCTAACTGGGTAGAAACG+GGG | - | chr8_1:34177890-34177909 | None:intergenic | 50.0% | |
| CACGCTAACTGGGTAGAAAC+GGG | - | chr8_1:34177891-34177910 | None:intergenic | 50.0% | |
| TCAATGGAGGTGACAAAGGC+TGG | - | chr8_1:34177993-34178012 | None:intergenic | 50.0% | |
| GTGGTCAATGGAGGTGACAA+AGG | - | chr8_1:34177997-34178016 | None:intergenic | 50.0% | |
| CTCCATTGACCACCTCAATG+CGG | + | chr8_1:34178004-34178023 | Msa1190890:intron | 50.0% | |
| AAAGCCAAACAGCCGCATTG+AGG | - | chr8_1:34178019-34178038 | None:intergenic | 50.0% | |
| GCTTGAAGAACATCTCGTGC+TGG | - | chr8_1:34178313-34178332 | None:intergenic | 50.0% | |
| GTCAAATCAGTCCGAGGCAT+GGG | - | chr8_1:34178654-34178673 | None:intergenic | 50.0% | |
| TACAGGCGAGGTAGGACTAA+AGG | + | chr8_1:34179546-34179565 | Msa1190890:intron | 50.0% | |
| GCGAGGTAGGACTAAAGGTA+CGG | + | chr8_1:34179551-34179570 | Msa1190890:intron | 50.0% | |
| !! | GACATCAATGAAGGTGCTGG+AGG | + | chr8_1:34179586-34179605 | Msa1190890:intron | 50.0% |
| GTGCTGCAATTAAGGGGTAG+GGG | + | chr8_1:34179631-34179650 | Msa1190890:intron | 50.0% | |
| GGGGAGGATTGCAATTAAGG+CGG | + | chr8_1:34179650-34179669 | Msa1190890:intron | 50.0% | |
| GCTTGGAGCATGGACAACAT+GGG | + | chr8_1:34179709-34179728 | Msa1190890:intron | 50.0% | |
| ! | ACCCAACACAATGAAGGTGC+TGG | + | chr8_1:34179916-34179935 | Msa1190890:intron | 50.0% |
| CTCCAGCACCTTCATTGTGT+TGG | - | chr8_1:34179921-34179940 | None:intergenic | 50.0% | |
| GCTGCAATTAAGGCTGCTAC+AGG | + | chr8_1:34179966-34179985 | Msa1190890:intron | 50.0% | |
| GCAATTAAGGCTGCTACAGG+CGG | + | chr8_1:34179969-34179988 | Msa1190890:intron | 50.0% | |
| CAGCCCGTTAAGTGTACTGT+TGG | - | chr8_1:34180011-34180030 | None:intergenic | 50.0% | |
| ! | CAACAGTACACTTAACGGGC+TGG | + | chr8_1:34180009-34180028 | Msa1190890:intron | 50.0% |
| AATGTTAACTAGTGCCCCCG+GGG | + | chr8_1:34180678-34180697 | Msa1190890:intron | 50.0% | |
| TAGGTCCTTAACAAGTGCCC+CGG | - | chr8_1:34180698-34180717 | None:intergenic | 50.0% | |
| !! | AGCATGCTTAAAGAGTGCCC+CGG | + | chr8_1:34180804-34180823 | Msa1190890:intron | 50.0% |
| TCTTGTTAACGAGTGTCCCC+CGG | - | chr8_1:34180826-34180845 | None:intergenic | 50.0% | |
| GGAGATAAATTGGGCCTGCT+TGG | + | chr8_1:34180903-34180922 | Msa1190890:intron | 50.0% | |
| ! | GTTTTCTAACTGGGCCAAGC+AGG | - | chr8_1:34180920-34180939 | None:intergenic | 50.0% |
| ! | GTTTTCCTCCAAACCCGAAG+TGG | + | chr8_1:34181011-34181030 | Msa1190890:intron | 50.0% |
| ! | AAAGGGTTCCACTTCGGGTT+TGG | - | chr8_1:34181022-34181041 | None:intergenic | 50.0% |
| AGCTGTATTGTGCGGCGATT+TGG | + | chr8_1:34181099-34181118 | Msa1190890:intron | 50.0% | |
| TGAGCCGCATTCAGAAGTAG+CGG | - | chr8_1:34181145-34181164 | None:intergenic | 50.0% | |
| TACTTCTGAATGCGGCTCAC+AGG | + | chr8_1:34181146-34181165 | Msa1190890:intron | 50.0% | |
| !! | GAAGTGCTAGTGCGTTTTGC+TGG | + | chr8_1:34181988-34182007 | Msa1190890:CDS | 50.0% |
| TTGGATCCGAGGAAGATGAG+TGG | + | chr8_1:34182013-34182032 | Msa1190890:CDS | 50.0% | |
| TCCTTGATGCTCAAAGACGG+AGG | + | chr8_1:34182290-34182309 | Msa1190890:CDS | 50.0% | |
| ! | AGACGGAGGCATGATGTAAG+AGG | + | chr8_1:34182304-34182323 | Msa1190890:CDS | 50.0% |
| GAACGAAGTTATAGGACCCC+CGG | - | chr8_1:34182605-34182624 | None:intergenic | 50.0% | |
| TGTGAATGATGCAGCACCCA+CGG | + | chr8_1:34183570-34183589 | Msa1190890:CDS | 50.0% | |
| GCAATCTTCTGCTGATCCGT+GGG | - | chr8_1:34183589-34183608 | None:intergenic | 50.0% | |
| GGATCAGCAGAAGATTGCGT+TGG | + | chr8_1:34183591-34183610 | Msa1190890:CDS | 50.0% | |
| CTCGCACCATGAACATTTGC+TGG | - | chr8_1:34183622-34183641 | None:intergenic | 50.0% | |
| CAGCAAATGTTCATGGTGCG+AGG | + | chr8_1:34183620-34183639 | Msa1190890:CDS | 50.0% | |
| TCTACTCAAAACCTGGCCGA+AGG | + | chr8_1:34183862-34183881 | Msa1190890:CDS | 50.0% | |
| CTACTCAAAACCTGGCCGAA+GGG | + | chr8_1:34183863-34183882 | Msa1190890:CDS | 50.0% | |
| ! | TTTAAGGCCTCTGCCTTCTG+TGG | + | chr8_1:34183906-34183925 | Msa1190890:three_prime_UTR | 50.0% |
| TTAAGGCCTCTGCCTTCTGT+GGG | + | chr8_1:34183907-34183926 | Msa1190890:three_prime_UTR | 50.0% | |
| TCCCAACCAGTAGGGAACCA+TGG | + | chr8_1:34176726-34176745 | Msa1190890:intron | 55.0% | |
| GAGGAAGAGCTTGGCTTCGA+TGG | + | chr8_1:34177304-34177323 | Msa1190890:intron | 55.0% | |
| CGCATTGAGGTGGTCAATGG+AGG | - | chr8_1:34178006-34178025 | None:intergenic | 55.0% | |
| AGCCGCATTGAGGTGGTCAA+TGG | - | chr8_1:34178009-34178028 | None:intergenic | 55.0% | |
| ACCACCTCAATGCGGCTGTT+TGG | + | chr8_1:34178012-34178031 | Msa1190890:intron | 55.0% | |
| GGTCAAATCAGTCCGAGGCA+TGG | - | chr8_1:34178655-34178674 | None:intergenic | 55.0% | |
| !! | GGACTGATTTGACCCCAGGA+AGG | + | chr8_1:34178661-34178680 | Msa1190890:CDS | 55.0% |
| GCAGGAACAGGAGAAGCTGT+TGG | - | chr8_1:34178699-34178718 | None:intergenic | 55.0% | |
| GAAGCTGAAGGAGCAGGAAC+AGG | - | chr8_1:34178711-34178730 | None:intergenic | 55.0% | |
| GTTCCTGCTCCTTCAGCTTC+AGG | + | chr8_1:34178711-34178730 | Msa1190890:CDS | 55.0% | |
| CTACCTGAAGCTGAAGGAGC+AGG | - | chr8_1:34178717-34178736 | None:intergenic | 55.0% | |
| CTGCAATTAAGGGGTAGGGG+AGG | + | chr8_1:34179634-34179653 | Msa1190890:intron | 55.0% | |
| GTCCATGCTCCAAGCCAACT+TGG | - | chr8_1:34179704-34179723 | None:intergenic | 55.0% | |
| GGCTTGGAGCATGGACAACA+TGG | + | chr8_1:34179708-34179727 | Msa1190890:intron | 55.0% | |
| GGCCATATCTCTAGGCGATG+TGG | + | chr8_1:34179873-34179892 | Msa1190890:intron | 55.0% | |
| ! | GGTGCTGGAGCTTGCAATGA+AGG | + | chr8_1:34179931-34179950 | Msa1190890:intron | 55.0% |
| AGGTCCTTAACAAGTGCCCC+GGG | - | chr8_1:34180697-34180716 | None:intergenic | 55.0% | |
| !! | GCATGCTTAAAGAGTGCCCC+GGG | + | chr8_1:34180805-34180824 | Msa1190890:intron | 55.0% |
| !! | CATGCTTAAAGAGTGCCCCG+GGG | + | chr8_1:34180806-34180825 | Msa1190890:intron | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | + | chr8_1:34180807-34180826 | Msa1190890:intron | 55.0% |
| TTGTTAACGAGTGTCCCCCG+GGG | - | chr8_1:34180824-34180843 | None:intergenic | 55.0% | |
| CTTGTTAACGAGTGTCCCCC+GGG | - | chr8_1:34180825-34180844 | None:intergenic | 55.0% | |
| ! | CGGCGATTTGGAACCGATTG+CGG | + | chr8_1:34181111-34181130 | Msa1190890:intron | 55.0% |
| TTCTGAATGCGGCTCACAGG+AGG | + | chr8_1:34181149-34181168 | Msa1190890:intron | 55.0% | |
| GATTCACATGGCAGAGAGCG+CGG | - | chr8_1:34182063-34182082 | None:intergenic | 55.0% | |
| GCCTCCGTCTTTGAGCATCA+AGG | - | chr8_1:34182294-34182313 | None:intergenic | 55.0% | |
| TCCTAAGCGGCACGATTTCC+TGG | - | chr8_1:34183501-34183520 | None:intergenic | 55.0% | |
| CGCAATCTTCTGCTGATCCG+TGG | - | chr8_1:34183590-34183609 | None:intergenic | 55.0% | |
| GACTTCAGGAACACGGCTAG+TGG | - | chr8_1:34183842-34183861 | None:intergenic | 55.0% | |
| CAAGTTACTTCCCTTCGGCC+AGG | - | chr8_1:34183876-34183895 | None:intergenic | 55.0% | |
| TAAGGCCTCTGCCTTCTGTG+GGG | + | chr8_1:34183908-34183927 | Msa1190890:three_prime_UTR | 55.0% | |
| ATGAACCCCACAGAAGGCAG+AGG | - | chr8_1:34183916-34183935 | None:intergenic | 55.0% | |
| ATGGGTCGCCCACCCAGTAA+CGG | + | chr8_1:34176389-34176408 | Msa1190890:CDS | 60.0% | |
| GCTGAGTGAAACGGAAGGCG+GGG | - | chr8_1:34176418-34176437 | None:intergenic | 60.0% | |
| GGCTGAGTGAAACGGAAGGC+GGG | - | chr8_1:34176419-34176438 | None:intergenic | 60.0% | |
| GGGCTGAGTGAAACGGAAGG+CGG | - | chr8_1:34176420-34176439 | None:intergenic | 60.0% | |
| CTCGGGCTGAGTGAAACGGA+AGG | - | chr8_1:34176423-34176442 | None:intergenic | 60.0% | |
| CTTCCGTTTCACTCAGCCCG+AGG | + | chr8_1:34176421-34176440 | Msa1190890:CDS | 60.0% | |
| ! | GAGGGAAGCCTTATGCACCC+AGG | + | chr8_1:34177093-34177112 | Msa1190890:intron | 60.0% |
| GCCAAACAGCCGCATTGAGG+TGG | - | chr8_1:34178016-34178035 | None:intergenic | 60.0% | |
| CCTGGGGTCAAATCAGTCCG+AGG | - | chr8_1:34178660-34178679 | None:intergenic | 60.0% | |
| !! | CCTCGGACTGATTTGACCCC+AGG | + | chr8_1:34178657-34178676 | Msa1190890:CDS | 60.0% |
| ACTTGGCCTGGGTGTGAGCT+GGG | - | chr8_1:34179687-34179706 | None:intergenic | 60.0% | |
| AACTTGGCCTGGGTGTGAGC+TGG | - | chr8_1:34179688-34179707 | None:intergenic | 60.0% | |
| AGCTCACACCCAGGCCAAGT+TGG | + | chr8_1:34179687-34179706 | Msa1190890:intron | 60.0% | |
| ! | ACACCCAGGCCAAGTTGGCT+TGG | + | chr8_1:34179692-34179711 | Msa1190890:intron | 60.0% |
| GCTCCAAGCCAACTTGGCCT+GGG | - | chr8_1:34179698-34179717 | None:intergenic | 60.0% | |
| TGCTCCAAGCCAACTTGGCC+TGG | - | chr8_1:34179699-34179718 | None:intergenic | 60.0% | |
| !! | GGCCAAGTTGGCTTGGAGCA+TGG | + | chr8_1:34179699-34179718 | Msa1190890:intron | 60.0% |
| GTCCTTAACAAGTGCCCCGG+GGG | - | chr8_1:34180695-34180714 | None:intergenic | 60.0% | |
| GGTCCTTAACAAGTGCCCCG+GGG | - | chr8_1:34180696-34180715 | None:intergenic | 60.0% | |
| ! | GGGTTCCACTTCGGGTTTGG+AGG | - | chr8_1:34181019-34181038 | None:intergenic | 60.0% |
| ! | AGCGGTTTTGCGGCCGCAAT+CGG | - | chr8_1:34181127-34181146 | None:intergenic | 60.0% |
| GAATGTGTCGCAGTGCTCCC+TGG | + | chr8_1:34182087-34182106 | Msa1190890:CDS | 60.0% | |
| !! | GCCAGGAAATCGTGCCGCTT+AGG | + | chr8_1:34183497-34183516 | Msa1190890:intron | 60.0% |
| AAGGCGGGGCCTCCGTTACT+GGG | - | chr8_1:34176404-34176423 | None:intergenic | 65.0% | |
| CTGACACCCAGCTCACACCC+AGG | + | chr8_1:34179678-34179697 | Msa1190890:intron | 65.0% | |
| ! | CAGATAGTGGCGCGGTGCAC+CGG | + | chr8_1:34180349-34180368 | Msa1190890:intron | 65.0% |
| ! | TGCCCCCGGGGCACTTGTTA+AGG | + | chr8_1:34180690-34180709 | Msa1190890:intron | 65.0% |
| CCAGTGAATGCGGCGGTGCT+TGG | - | chr8_1:34183811-34183830 | None:intergenic | 65.0% | |
| ! | CCAAGCACCGCCGCATTCAC+TGG | + | chr8_1:34183808-34183827 | Msa1190890:CDS | 65.0% |
| GGTCGCCCACCCAGTAACGG+AGG | + | chr8_1:34176392-34176411 | Msa1190890:CDS | 70.0% | |
| CGGGGCCTCCGTTACTGGGT+GGG | - | chr8_1:34176400-34176419 | None:intergenic | 70.0% | |
| GAAGGCGGGGCCTCCGTTAC+TGG | - | chr8_1:34176405-34176424 | None:intergenic | 70.0% | |
| GCGGGGCCTCCGTTACTGGG+TGG | - | chr8_1:34176401-34176420 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 34176272 | 34184134 | 34176272 | ID=Msa1190890;Name=Msa1190890 |
| chr8_1 | mRNA | 34176272 | 34184134 | 34176272 | ID=Msa1190890-mRNA-1;Parent=Msa1190890;Name=Msa1190890-mRNA-1;_AED=0.07;_eAED=0.07;_QI=117|1|1|1|0.87|1|9|243|375 |
| chr8_1 | exon | 34176272 | 34176442 | 34176272 | ID=Msa1190890-mRNA-1:exon:11463;Parent=Msa1190890-mRNA-1 |
| chr8_1 | exon | 34178265 | 34178350 | 34178265 | ID=Msa1190890-mRNA-1:exon:11464;Parent=Msa1190890-mRNA-1 |
| chr8_1 | exon | 34178453 | 34178498 | 34178453 | ID=Msa1190890-mRNA-1:exon:11465;Parent=Msa1190890-mRNA-1 |
| chr8_1 | exon | 34178573 | 34178732 | 34178573 | ID=Msa1190890-mRNA-1:exon:11466;Parent=Msa1190890-mRNA-1 |
| chr8_1 | exon | 34181289 | 34181364 | 34181289 | ID=Msa1190890-mRNA-1:exon:11467;Parent=Msa1190890-mRNA-1 |
| chr8_1 | exon | 34181457 | 34181508 | 34181457 | ID=Msa1190890-mRNA-1:exon:11468;Parent=Msa1190890-mRNA-1 |
| chr8_1 | exon | 34181988 | 34182131 | 34181988 | ID=Msa1190890-mRNA-1:exon:11469;Parent=Msa1190890-mRNA-1 |
| chr8_1 | exon | 34182253 | 34182372 | 34182253 | ID=Msa1190890-mRNA-1:exon:11470;Parent=Msa1190890-mRNA-1 |
| chr8_1 | exon | 34183502 | 34184134 | 34183502 | ID=Msa1190890-mRNA-1:exon:11471;Parent=Msa1190890-mRNA-1 |
| chr8_1 | five_prime_UTR | 34176272 | 34176388 | 34176272 | ID=Msa1190890-mRNA-1:five_prime_utr;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34176389 | 34176442 | 34176389 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34178265 | 34178350 | 34178265 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34178453 | 34178498 | 34178453 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34178573 | 34178732 | 34178573 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34181289 | 34181364 | 34181289 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34181457 | 34181508 | 34181457 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34181988 | 34182131 | 34181988 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34182253 | 34182372 | 34182253 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | CDS | 34183502 | 34183891 | 34183502 | ID=Msa1190890-mRNA-1:cds;Parent=Msa1190890-mRNA-1 |
| chr8_1 | three_prime_UTR | 34183892 | 34184134 | 34183892 | ID=Msa1190890-mRNA-1:three_prime_utr;Parent=Msa1190890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
