Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264530 | XP_003597378.1 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 5.44e-127 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264530 | G7IRV6 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 2.60e-127 | 365 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010490 | Msa0264530 | 0.801806 | 7.566776e-49 | -8.615850e-47 |
| Msa0010500 | Msa0264530 | 0.800552 | 1.365876e-48 | -8.615850e-47 |
| Msa0010850 | Msa0264530 | 0.824921 | 6.212294e-54 | -8.615850e-47 |
| Msa0030300 | Msa0264530 | 0.845869 | 3.102224e-59 | -8.615850e-47 |
| Msa0037160 | Msa0264530 | 0.815352 | 9.660539e-52 | -8.615850e-47 |
| Msa0042550 | Msa0264530 | 0.819606 | 1.063325e-52 | -8.615850e-47 |
| Msa0043500 | Msa0264530 | 0.821234 | 4.499103e-53 | -8.615850e-47 |
| Msa0043650 | Msa0264530 | 0.815810 | 7.637853e-52 | -8.615850e-47 |
| Msa0045490 | Msa0264530 | 0.810087 | 1.372056e-50 | -8.615850e-47 |
| Msa0051750 | Msa0264530 | 0.812459 | 4.194149e-51 | -8.615850e-47 |
| Msa0052860 | Msa0264530 | 0.815738 | 7.925267e-52 | -8.615850e-47 |
| Msa0054820 | Msa0264530 | 0.811372 | 7.234203e-51 | -8.615850e-47 |
| Msa0055070 | Msa0264530 | 0.804704 | 1.901009e-49 | -8.615850e-47 |
| Msa0077900 | Msa0264530 | 0.818019 | 2.438728e-52 | -8.615850e-47 |
| Msa0086420 | Msa0264530 | 0.809513 | 1.822912e-50 | -8.615850e-47 |
| Msa0087800 | Msa0264530 | 0.805894 | 1.070991e-49 | -8.615850e-47 |
| Msa0090520 | Msa0264530 | 0.803061 | 4.172606e-49 | -8.615850e-47 |
| Msa0090550 | Msa0264530 | 0.802700 | 4.954820e-49 | -8.615850e-47 |
| Msa0097950 | Msa0264530 | 0.807196 | 5.688368e-50 | -8.615850e-47 |
| Msa0100160 | Msa0264530 | 0.813968 | 1.956890e-51 | -8.615850e-47 |
| Msa0101020 | Msa0264530 | 0.800163 | 1.639486e-48 | -8.615850e-47 |
| Msa0105520 | Msa0264530 | 0.822111 | 2.820924e-53 | -8.615850e-47 |
| Msa0108390 | Msa0264530 | 0.822407 | 2.407806e-53 | -8.615850e-47 |
| Msa0127850 | Msa0264530 | 0.814939 | 1.193071e-51 | -8.615850e-47 |
| Msa0128650 | Msa0264530 | 0.810934 | 9.006585e-51 | -8.615850e-47 |
| Msa0131330 | Msa0264530 | 0.835945 | 1.248902e-56 | -8.615850e-47 |
| Msa0137990 | Msa0264530 | 0.805342 | 1.398344e-49 | -8.615850e-47 |
| Msa0140170 | Msa0264530 | 0.801597 | 8.353372e-49 | -8.615850e-47 |
| Msa0142500 | Msa0264530 | 0.811521 | 6.716628e-51 | -8.615850e-47 |
| Msa0146080 | Msa0264530 | 0.808039 | 3.767679e-50 | -8.615850e-47 |
| Msa0146770 | Msa0264530 | 0.807181 | 5.728692e-50 | -8.615850e-47 |
| Msa0177210 | Msa0264530 | 0.817237 | 3.660330e-52 | -8.615850e-47 |
| Msa0178510 | Msa0264530 | 0.827195 | 1.789232e-54 | -8.615850e-47 |
| Msa0185510 | Msa0264530 | 0.800155 | 1.645298e-48 | -8.615850e-47 |
| Msa0187490 | Msa0264530 | 0.803371 | 3.599383e-49 | -8.615850e-47 |
| Msa0189300 | Msa0264530 | 0.817242 | 3.651098e-52 | -8.615850e-47 |
| Msa0193540 | Msa0264530 | 0.802623 | 5.139004e-49 | -8.615850e-47 |
| Msa0198530 | Msa0264530 | 0.805359 | 1.387041e-49 | -8.615850e-47 |
| Msa0200620 | Msa0264530 | 0.808846 | 2.534016e-50 | -8.615850e-47 |
| Msa0229170 | Msa0264530 | 0.823095 | 1.665943e-53 | -8.615850e-47 |
| Msa0231660 | Msa0264530 | 0.806916 | 6.518339e-50 | -8.615850e-47 |
| Msa0240300 | Msa0264530 | 0.806749 | 7.073446e-50 | -8.615850e-47 |
| Msa0241140 | Msa0264530 | 0.806142 | 9.497114e-50 | -8.615850e-47 |
| Msa0259270 | Msa0264530 | 0.802849 | 4.616008e-49 | -8.615850e-47 |
| Msa0264530 | Msa0271530 | 0.833755 | 4.443417e-56 | -8.615850e-47 |
| Msa0264530 | Msa0278790 | 0.802103 | 6.576015e-49 | -8.615850e-47 |
| Msa0264530 | Msa0281480 | 0.839515 | 1.512856e-57 | -8.615850e-47 |
| Msa0264530 | Msa0290760 | 0.813160 | 2.945504e-51 | -8.615850e-47 |
| Msa0264530 | Msa0296980 | -0.829075 | 6.304321e-55 | -8.615850e-47 |
| Msa0264530 | Msa0307560 | 0.814618 | 1.405294e-51 | -8.615850e-47 |
| Msa0264530 | Msa0320610 | 0.837683 | 4.498966e-57 | -8.615850e-47 |
| Msa0264530 | Msa0324240 | 0.810983 | 8.788652e-51 | -8.615850e-47 |
| Msa0264530 | Msa0343190 | 0.801035 | 1.088921e-48 | -8.615850e-47 |
| Msa0264530 | Msa0347950 | 0.809148 | 2.183272e-50 | -8.615850e-47 |
| Msa0264530 | Msa0347990 | 0.803054 | 4.185897e-49 | -8.615850e-47 |
| Msa0264530 | Msa0365860 | 0.802696 | 4.963486e-49 | -8.615850e-47 |
| Msa0264530 | Msa0371250 | 0.809095 | 2.240895e-50 | -8.615850e-47 |
| Msa0264530 | Msa0378970 | 0.821892 | 3.171205e-53 | -8.615850e-47 |
| Msa0264530 | Msa0392270 | 0.820442 | 6.844438e-53 | -8.615850e-47 |
| Msa0264530 | Msa0397820 | 0.810161 | 1.322659e-50 | -8.615850e-47 |
| Msa0264530 | Msa0403660 | 0.820133 | 8.055042e-53 | -8.615850e-47 |
| Msa0264530 | Msa0408390 | 0.817046 | 4.039009e-52 | -8.615850e-47 |
| Msa0264530 | Msa0410300 | 0.818214 | 2.202720e-52 | -8.615850e-47 |
| Msa0264530 | Msa0413730 | 0.833469 | 5.238374e-56 | -8.615850e-47 |
| Msa0264530 | Msa0422180 | 0.827411 | 1.588126e-54 | -8.615850e-47 |
| Msa0264530 | Msa0437400 | 0.803997 | 2.668817e-49 | -8.615850e-47 |
| Msa0264530 | Msa0439890 | 0.817806 | 2.724215e-52 | -8.615850e-47 |
| Msa0264530 | Msa0443430 | 0.831497 | 1.614159e-55 | -8.615850e-47 |
| Msa0264530 | Msa0461590 | 0.825728 | 4.001400e-54 | -8.615850e-47 |
| Msa0264530 | Msa0468320 | 0.839514 | 1.514236e-57 | -8.615850e-47 |
| Msa0264530 | Msa0480780 | 0.801372 | 9.288255e-49 | -8.615850e-47 |
| Msa0264530 | Msa0481750 | 0.813280 | 2.772524e-51 | -8.615850e-47 |
| Msa0264530 | Msa0482180 | 0.807108 | 5.936409e-50 | -8.615850e-47 |
| Msa0264530 | Msa0484840 | 0.811396 | 7.148172e-51 | -8.615850e-47 |
| Msa0264530 | Msa0485490 | 0.817056 | 4.019319e-52 | -8.615850e-47 |
| Msa0264530 | Msa0489660 | 0.835611 | 1.517485e-56 | -8.615850e-47 |
| Msa0264530 | Msa0505380 | 0.809675 | 1.683013e-50 | -8.615850e-47 |
| Msa0264530 | Msa0510930 | 0.803139 | 4.020522e-49 | -8.615850e-47 |
| Msa0264530 | Msa0514610 | 0.815983 | 6.987696e-52 | -8.615850e-47 |
| Msa0264530 | Msa0517090 | 0.840713 | 7.368936e-58 | -8.615850e-47 |
| Msa0264530 | Msa0518380 | 0.820327 | 7.271513e-53 | -8.615850e-47 |
| Msa0264530 | Msa0518440 | 0.829122 | 6.140291e-55 | -8.615850e-47 |
| Msa0264530 | Msa0521670 | 0.800416 | 1.456492e-48 | -8.615850e-47 |
| Msa0264530 | Msa0532980 | 0.828935 | 6.815658e-55 | -8.615850e-47 |
| Msa0264530 | Msa0546570 | 0.811122 | 8.199072e-51 | -8.615850e-47 |
| Msa0264530 | Msa0556790 | 0.808386 | 3.177883e-50 | -8.615850e-47 |
| Msa0264530 | Msa0565620 | -0.810406 | 1.171260e-50 | -8.615850e-47 |
| Msa0264530 | Msa0576680 | 0.802547 | 5.328355e-49 | -8.615850e-47 |
| Msa0264530 | Msa0586850 | 0.804418 | 2.181181e-49 | -8.615850e-47 |
| Msa0264530 | Msa0598160 | 0.809886 | 1.515750e-50 | -8.615850e-47 |
| Msa0264530 | Msa0610130 | 0.805105 | 1.567286e-49 | -8.615850e-47 |
| Msa0264530 | Msa0614510 | 0.818465 | 1.933086e-52 | -8.615850e-47 |
| Msa0264530 | Msa0618950 | 0.816526 | 5.285669e-52 | -8.615850e-47 |
| Msa0264530 | Msa0618970 | 0.814522 | 1.475776e-51 | -8.615850e-47 |
| Msa0264530 | Msa0620330 | 0.830111 | 3.530697e-55 | -8.615850e-47 |
| Msa0264530 | Msa0620620 | 0.819308 | 1.243488e-52 | -8.615850e-47 |
| Msa0264530 | Msa0637900 | 0.812145 | 4.911876e-51 | -8.615850e-47 |
| Msa0264530 | Msa0641730 | 0.803439 | 3.484824e-49 | -8.615850e-47 |
| Msa0264530 | Msa0647930 | 0.808551 | 2.929503e-50 | -8.615850e-47 |
| Msa0264530 | Msa0647950 | 0.810100 | 1.363509e-50 | -8.615850e-47 |
| Msa0264530 | Msa0652300 | 0.810516 | 1.108809e-50 | -8.615850e-47 |
| Msa0264530 | Msa0667770 | 0.821952 | 3.071644e-53 | -8.615850e-47 |
| Msa0264530 | Msa0667790 | 0.810698 | 1.012801e-50 | -8.615850e-47 |
| Msa0264530 | Msa0673270 | 0.805997 | 1.018643e-49 | -8.615850e-47 |
| Msa0264530 | Msa0675990 | 0.818306 | 2.099559e-52 | -8.615850e-47 |
| Msa0264530 | Msa0686080 | 0.807642 | 4.573959e-50 | -8.615850e-47 |
| Msa0264530 | Msa0694840 | 0.811311 | 7.460825e-51 | -8.615850e-47 |
| Msa0264530 | Msa0703910 | 0.800653 | 1.303122e-48 | -8.615850e-47 |
| Msa0264530 | Msa0705190 | 0.817911 | 2.580028e-52 | -8.615850e-47 |
| Msa0264530 | Msa0705390 | 0.811801 | 5.838511e-51 | -8.615850e-47 |
| Msa0264530 | Msa0709160 | 0.816901 | 4.353402e-52 | -8.615850e-47 |
| Msa0264530 | Msa0721280 | 0.802295 | 6.002628e-49 | -8.615850e-47 |
| Msa0264530 | Msa0726080 | 0.826384 | 2.794832e-54 | -8.615850e-47 |
| Msa0264530 | Msa0738440 | 0.819533 | 1.104696e-52 | -8.615850e-47 |
| Msa0264530 | Msa0748730 | 0.800664 | 1.296002e-48 | -8.615850e-47 |
| Msa0264530 | Msa0753990 | -0.808556 | 2.922257e-50 | -8.615850e-47 |
| Msa0264530 | Msa0756930 | 0.801599 | 8.343442e-49 | -8.615850e-47 |
| Msa0264530 | Msa0760350 | 0.818916 | 1.527180e-52 | -8.615850e-47 |
| Msa0264530 | Msa0764690 | 0.808140 | 3.584345e-50 | -8.615850e-47 |
| Msa0264530 | Msa0779260 | 0.802397 | 5.718999e-49 | -8.615850e-47 |
| Msa0264530 | Msa0784380 | 0.811631 | 6.356582e-51 | -8.615850e-47 |
| Msa0264530 | Msa0801730 | 0.817523 | 3.155718e-52 | -8.615850e-47 |
| Msa0264530 | Msa0817120 | 0.802848 | 4.617405e-49 | -8.615850e-47 |
| Msa0264530 | Msa0817460 | 0.805881 | 1.077481e-49 | -8.615850e-47 |
| Msa0264530 | Msa0819060 | 0.806852 | 6.727616e-50 | -8.615850e-47 |
| Msa0264530 | Msa0827280 | 0.830065 | 3.623067e-55 | -8.615850e-47 |
| Msa0264530 | Msa0846230 | 0.827786 | 1.290565e-54 | -8.615850e-47 |
| Msa0264530 | Msa0849110 | -0.808734 | 2.676992e-50 | -8.615850e-47 |
| Msa0264530 | Msa0850710 | 0.813947 | 1.977249e-51 | -8.615850e-47 |
| Msa0264530 | Msa0859180 | 0.806243 | 9.043176e-50 | -8.615850e-47 |
| Msa0264530 | Msa0865030 | 0.815031 | 1.138692e-51 | -8.615850e-47 |
| Msa0264530 | Msa0865570 | 0.815344 | 9.702393e-52 | -8.615850e-47 |
| Msa0264530 | Msa0866400 | 0.810584 | 1.071907e-50 | -8.615850e-47 |
| Msa0264530 | Msa0880040 | 0.825799 | 3.849926e-54 | -8.615850e-47 |
| Msa0264530 | Msa0880810 | 0.800789 | 1.222403e-48 | -8.615850e-47 |
| Msa0264530 | Msa0890550 | 0.815784 | 7.740623e-52 | -8.615850e-47 |
| Msa0264530 | Msa0899350 | 0.801358 | 9.351946e-49 | -8.615850e-47 |
| Msa0264530 | Msa0905750 | 0.814427 | 1.549025e-51 | -8.615850e-47 |
| Msa0264530 | Msa0918390 | 0.818884 | 1.552684e-52 | -8.615850e-47 |
| Msa0264530 | Msa0944660 | 0.825298 | 5.059102e-54 | -8.615850e-47 |
| Msa0264530 | Msa0945240 | 0.805442 | 1.332057e-49 | -8.615850e-47 |
| Msa0264530 | Msa0970530 | 0.803868 | 2.838895e-49 | -8.615850e-47 |
| Msa0264530 | Msa0980020 | 0.804249 | 2.364709e-49 | -8.615850e-47 |
| Msa0264530 | Msa0980940 | 0.800302 | 1.536447e-48 | -8.615850e-47 |
| Msa0264530 | Msa0990580 | 0.823441 | 1.383071e-53 | -8.615850e-47 |
| Msa0264530 | Msa1001390 | 0.807980 | 3.876638e-50 | -8.615850e-47 |
| Msa0264530 | Msa1006910 | -0.805559 | 1.259337e-49 | -8.615850e-47 |
| Msa0264530 | Msa1028760 | -0.803603 | 3.221491e-49 | -8.615850e-47 |
| Msa0264530 | Msa1031770 | 0.807415 | 5.111391e-50 | -8.615850e-47 |
| Msa0264530 | Msa1034270 | 0.817145 | 3.838010e-52 | -8.615850e-47 |
| Msa0264530 | Msa1036410 | 0.805552 | 1.263558e-49 | -8.615850e-47 |
| Msa0264530 | Msa1040840 | 0.808102 | 3.652015e-50 | -8.615850e-47 |
| Msa0264530 | Msa1042660 | 0.801771 | 7.694888e-49 | -8.615850e-47 |
| Msa0264530 | Msa1050420 | 0.816343 | 5.807761e-52 | -8.615850e-47 |
| Msa0264530 | Msa1063420 | 0.826264 | 2.984617e-54 | -8.615850e-47 |
| Msa0264530 | Msa1063510 | 0.800929 | 1.144565e-48 | -8.615850e-47 |
| Msa0264530 | Msa1067890 | -0.812250 | 4.660577e-51 | -8.615850e-47 |
| Msa0264530 | Msa1070840 | 0.813121 | 3.005140e-51 | -8.615850e-47 |
| Msa0264530 | Msa1080640 | 0.810809 | 9.584071e-51 | -8.615850e-47 |
| Msa0264530 | Msa1081560 | 0.804054 | 2.597335e-49 | -8.615850e-47 |
| Msa0264530 | Msa1089320 | 0.835588 | 1.537617e-56 | -8.615850e-47 |
| Msa0264530 | Msa1109350 | 0.805172 | 1.517652e-49 | -8.615850e-47 |
| Msa0264530 | Msa1111870 | 0.820317 | 7.311167e-53 | -8.615850e-47 |
| Msa0264530 | Msa1113230 | -0.820718 | 5.915601e-53 | -8.615850e-47 |
| Msa0264530 | Msa1114590 | 0.824203 | 9.167139e-54 | -8.615850e-47 |
| Msa0264530 | Msa1118760 | 0.807388 | 5.179426e-50 | -8.615850e-47 |
| Msa0264530 | Msa1126450 | 0.814706 | 1.343966e-51 | -8.615850e-47 |
| Msa0264530 | Msa1130530 | 0.812273 | 4.606320e-51 | -8.615850e-47 |
| Msa0264530 | Msa1130670 | -0.837501 | 5.007592e-57 | -8.615850e-47 |
| Msa0264530 | Msa1133400 | 0.817706 | 2.868759e-52 | -8.615850e-47 |
| Msa0264530 | Msa1135800 | -0.804940 | 1.696878e-49 | -8.615850e-47 |
| Msa0264530 | Msa1143020 | 0.826787 | 2.239114e-54 | -8.615850e-47 |
| Msa0264530 | Msa1158230 | 0.800280 | 1.551943e-48 | -8.615850e-47 |
| Msa0264530 | Msa1158660 | 0.814505 | 1.489092e-51 | -8.615850e-47 |
| Msa0264530 | Msa1169850 | -0.814643 | 1.388029e-51 | -8.615850e-47 |
| Msa0264530 | Msa1178060 | 0.824768 | 6.747565e-54 | -8.615850e-47 |
| Msa0264530 | Msa1188600 | -0.835959 | 1.238449e-56 | -8.615850e-47 |
| Msa0264530 | Msa1206310 | 0.825990 | 3.467725e-54 | -8.615850e-47 |
| Msa0264530 | Msa1206360 | 0.811241 | 7.727067e-51 | -8.615850e-47 |
| Msa0264530 | Msa1207310 | 0.800382 | 1.479469e-48 | -8.615850e-47 |
| Msa0264530 | Msa1207350 | 0.802023 | 6.830529e-49 | -8.615850e-47 |
| Msa0264530 | Msa1209760 | 0.804113 | 2.524931e-49 | -8.615850e-47 |
| Msa0264530 | Msa1215920 | 0.804661 | 1.941128e-49 | -8.615850e-47 |
| Msa0264530 | Msa1226470 | 0.801779 | 7.666537e-49 | -8.615850e-47 |
| Msa0264530 | Msa1226610 | 0.807718 | 4.409107e-50 | -8.615850e-47 |
| Msa0264530 | Msa1236890 | 0.824119 | 9.590548e-54 | -8.615850e-47 |
| Msa0264530 | Msa1242580 | -0.824679 | 7.083106e-54 | -8.615850e-47 |
| Msa0264530 | Msa1250110 | 0.814330 | 1.627773e-51 | -8.615850e-47 |
| Msa0264530 | Msa1250730 | 0.813328 | 2.706303e-51 | -8.615850e-47 |
| Msa0264530 | Msa1270660 | 0.816793 | 4.603320e-52 | -8.615850e-47 |
| Msa0264530 | Msa1280620 | 0.845547 | 3.795046e-59 | -8.615850e-47 |
| Msa0264530 | Msa1286550 | 0.823474 | 1.358786e-53 | -8.615850e-47 |
| Msa0264530 | Msa1294960 | 0.807000 | 6.257396e-50 | -8.615850e-47 |
| Msa0264530 | Msa1306390 | 0.800449 | 1.433699e-48 | -8.615850e-47 |
| Msa0264530 | Msa1307180 | 0.804447 | 2.151363e-49 | -8.615850e-47 |
| Msa0264530 | Msa1331350 | 0.803844 | 2.871578e-49 | -8.615850e-47 |
| Msa0264530 | Msa1355700 | 0.805042 | 1.615515e-49 | -8.615850e-47 |
| Msa0264530 | Msa1357080 | 0.813978 | 1.946219e-51 | -8.615850e-47 |
| Msa0264530 | Msa1357890 | 0.804311 | 2.295516e-49 | -8.615850e-47 |
| Msa0264530 | Msa1359560 | 0.823319 | 1.476926e-53 | -8.615850e-47 |
| Msa0264530 | Msa1360980 | 0.812733 | 3.653706e-51 | -8.615850e-47 |
| Msa0264530 | Msa1364210 | 0.838156 | 3.399250e-57 | -8.615850e-47 |
| Msa0264530 | Msa1371090 | 0.806203 | 9.219985e-50 | -8.615850e-47 |
| Msa0264530 | Msa1371240 | 0.819096 | 1.389825e-52 | -8.615850e-47 |
| Msa0264530 | Msa1372150 | 0.825480 | 4.581098e-54 | -8.615850e-47 |
| Msa0264530 | Msa1374710 | 0.802841 | 4.632080e-49 | -8.615850e-47 |
| Msa0264530 | Msa1376130 | 0.812715 | 3.687488e-51 | -8.615850e-47 |
| Msa0264530 | Msa1376170 | 0.829710 | 4.420434e-55 | -8.615850e-47 |
| Msa0264530 | Msa1376200 | 0.806343 | 8.614379e-50 | -8.615850e-47 |
| Msa0264530 | Msa1377570 | 0.812495 | 4.120375e-51 | -8.615850e-47 |
| Msa0264530 | Msa1381480 | 0.805201 | 1.496608e-49 | -8.615850e-47 |
| Msa0264530 | Msa1382790 | 0.832293 | 1.027023e-55 | -8.615850e-47 |
| Msa0264530 | Msa1384870 | 0.803955 | 2.722936e-49 | -8.615850e-47 |
| Msa0264530 | Msa1385460 | 0.819086 | 1.396720e-52 | -8.615850e-47 |
| Msa0264530 | Msa1389850 | 0.807151 | 5.813631e-50 | -8.615850e-47 |
| Msa0264530 | Msa1389880 | 0.803766 | 2.979904e-49 | -8.615850e-47 |
| Msa0264530 | Msa1395600 | -0.824469 | 7.936029e-54 | -8.615850e-47 |
| Msa0264530 | Msa1398090 | 0.802074 | 6.667868e-49 | -8.615850e-47 |
| Msa0264530 | Msa1407190 | 0.819065 | 1.412283e-52 | -8.615850e-47 |
| Msa0264530 | Msa1410420 | 0.802670 | 5.024278e-49 | -8.615850e-47 |
| Msa0264530 | Msa1416370 | 0.820205 | 7.756282e-53 | -8.615850e-47 |
| Msa0264530 | Msa1426570 | 0.803428 | 3.502309e-49 | -8.615850e-47 |
| Msa0264530 | Msa1428780 | 0.805111 | 1.563276e-49 | -8.615850e-47 |
| Msa0264530 | Msa1432130 | 0.818740 | 1.673723e-52 | -8.615850e-47 |
| Msa0264530 | Msa1454530 | 0.804453 | 2.145178e-49 | -8.615850e-47 |
| Msa0264530 | Msa1454620 | 0.820266 | 7.512276e-53 | -8.615850e-47 |
| Msa0264530 | Msa1466090 | 0.809141 | 2.190850e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264530 | MtrunA17_Chr2g0328441 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 5.01e-131 | 365 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264530 | AT5G59460.1 | 46.154 | 182 | 78 | 6 | 1 | 179 | 1 | 165 | 9.24e-36 | 123 |
| Msa0264530 | AT5G59460.2 | 57.831 | 83 | 33 | 1 | 1 | 83 | 1 | 81 | 3.67e-26 | 97.4 |
Find 42 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCAACAATTTCTAGAAAA+TGG | 0.228195 | 2_2:-64457066 | Msa0264530:intron |
| TCTGTATTTGTGGTTCTATT+AGG | 0.278167 | 2_2:-64454587 | Msa0264530:three_prime_UTR |
| CCCCGTCCTGGAGCATTTAA+AGG | 0.280597 | 2_2:-64455361 | Msa0264530:CDS |
| AGTGAGGAGTGTAATTTAAA+AGG | 0.304020 | 2_2:-64454535 | Msa0264530:three_prime_UTR |
| ATTACTAGAAATGCTAGTTT+TGG | 0.306488 | 2_2:+64455158 | None:intergenic |
| GTCAAGCATGATGTTAGTTT+TGG | 0.309266 | 2_2:-64457094 | Msa0264530:CDS |
| CCGCGTTCACAAATCAGATT+TGG | 0.349528 | 2_2:-64457438 | Msa0264530:five_prime_UTR |
| ATCATCGCCGAACAATGGTT+TGG | 0.369184 | 2_2:-64454759 | Msa0264530:CDS |
| AGGTTAATGGAAATGGTAAA+AGG | 0.371437 | 2_2:-64454850 | Msa0264530:CDS |
| TAAACAAATTAAGCTAGGTT+TGG | 0.384147 | 2_2:-64454637 | Msa0264530:three_prime_UTR |
| ACCTTTAAATGCTCCAGGAC+GGG | 0.395840 | 2_2:+64455360 | None:intergenic |
| TTGTTCCCTTGATCATTGTT+TGG | 0.402209 | 2_2:+64454785 | None:intergenic |
| AGGAACTAGGTTAAGGTTGT+TGG | 0.409007 | 2_2:-64457415 | Msa0264530:five_prime_UTR |
| TCATTGTTTGGTGATTTGTT+AGG | 0.413961 | 2_2:+64454797 | None:intergenic |
| AGTTATGAGGTTAATGGAAA+TGG | 0.420080 | 2_2:-64454857 | Msa0264530:CDS |
| TCATCGCCGAACAATGGTTT+GGG | 0.420942 | 2_2:-64454758 | Msa0264530:CDS |
| GATTTGGAGGAACTAGGTTA+AGG | 0.440005 | 2_2:-64457422 | Msa0264530:five_prime_UTR |
| AATTTAAAAGGTAAAGTGTA+AGG | 0.445030 | 2_2:-64454523 | Msa0264530:three_prime_UTR |
| AAAGAACCCAAACCATTGTT+CGG | 0.446315 | 2_2:+64454752 | None:intergenic |
| AGTTGAGAAAGTAGAAGAAG+AGG | 0.453575 | 2_2:-64457116 | Msa0264530:CDS |
| GTGGAAGGTGATCCCCGTCC+TGG | 0.465496 | 2_2:-64455373 | Msa0264530:CDS |
| AAATCACCAAACAATGATCA+AGG | 0.473290 | 2_2:-64454791 | Msa0264530:CDS |
| AAAATGCAAATGTGTCTGTT+AGG | 0.477260 | 2_2:-64455134 | Msa0264530:intron |
| TTTCTTAAACAAATTAAGCT+AGG | 0.484033 | 2_2:-64454642 | Msa0264530:three_prime_UTR |
| CGTCTGGAGATAAGCTAGAC+TGG | 0.504379 | 2_2:-64454721 | Msa0264530:CDS |
| AAATACAGACATAAAAGCTC+AGG | 0.507823 | 2_2:+64454601 | None:intergenic |
| CCTTTAAATGCTCCAGGACG+GGG | 0.512790 | 2_2:+64455361 | None:intergenic |
| GAAAATAACTCTTCAGCAGA+AGG | 0.521915 | 2_2:-64454908 | Msa0264530:CDS |
| AAATCAGATTTGGAGGAACT+AGG | 0.524379 | 2_2:-64457428 | Msa0264530:five_prime_UTR |
| TTCAAACTCACATCAACAGT+TGG | 0.532123 | 2_2:+64455313 | None:intergenic |
| CGTTCACAAATCAGATTTGG+AGG | 0.543222 | 2_2:-64457435 | Msa0264530:five_prime_UTR |
| ATTCGACCTTTAAATGCTCC+AGG | 0.549316 | 2_2:+64455355 | None:intergenic |
| GCCTTTGTAGAAATTAAATG+AGG | 0.551548 | 2_2:-64455208 | Msa0264530:intron |
| GACCTTTAAATGCTCCAGGA+CGG | 0.557661 | 2_2:+64455359 | None:intergenic |
| TATATGTAGTGTGGTCATAG+TGG | 0.558579 | 2_2:-64455392 | Msa0264530:intron |
| CAGTCTAGCTTATCTCCAGA+CGG | 0.569006 | 2_2:+64454722 | None:intergenic |
| AATCTGAAAGCAACTTACAA+TGG | 0.601743 | 2_2:-64457360 | Msa0264530:exon |
| CCAAATCTGATTTGTGAACG+CGG | 0.625010 | 2_2:+64457438 | None:intergenic |
| GATTTGACTTCTCTAAAGTG+AGG | 0.630336 | 2_2:-64454551 | Msa0264530:three_prime_UTR |
| AATCACCAAACAATGATCAA+GGG | 0.631099 | 2_2:-64454790 | Msa0264530:CDS |
| AATACAGACATAAAAGCTCA+GGG | 0.661578 | 2_2:+64454602 | None:intergenic |
| TGTAGTGTGGTCATAGTGGA+AGG | 0.671991 | 2_2:-64455388 | Msa0264530:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTAATGCATAT+TGG | - | chr2_2:64454863-64454882 | Msa0264530:CDS | 10.0% |
| !! | ATGAAAATTTGAATTTATCT+TGG | - | chr2_2:64454981-64455000 | Msa0264530:intron | 15.0% |
| !! | AAAGATTTGTCAAATATATA+GGG | + | chr2_2:64456312-64456331 | None:intergenic | 15.0% |
| !!! | TGCTATTTTATAATGTAAAA+AGG | + | chr2_2:64456336-64456355 | None:intergenic | 15.0% |
| !! | AAAATCAACAATAACGATTT+GGG | + | chr2_2:64454590-64454609 | None:intergenic | 20.0% |
| !! | AAAAATCAACAATAACGATT+TGG | + | chr2_2:64454591-64454610 | None:intergenic | 20.0% |
| !!! | TTCTTTGTTTTCTTTTCTTT+TGG | - | chr2_2:64454689-64454708 | Msa0264530:CDS | 20.0% |
| !! | CATATTAGAATTGAAATTCA+CGG | - | chr2_2:64454933-64454952 | Msa0264530:intron | 20.0% |
| !! | AAAATCTGTAAATTGATATC+GGG | + | chr2_2:64455583-64455602 | None:intergenic | 20.0% |
| !! | CAAAATCTGTAAATTGATAT+CGG | + | chr2_2:64455584-64455603 | None:intergenic | 20.0% |
| !! | TTGTATTTGTTCAAAAATAG+CGG | - | chr2_2:64455746-64455765 | Msa0264530:intron | 20.0% |
| !!! | TCATGTGAAATTTTTTTCTA+TGG | - | chr2_2:64455978-64455997 | Msa0264530:intron | 20.0% |
| !!! | GGTTTTTCAATTAATTAGTA+AGG | - | chr2_2:64456198-64456217 | Msa0264530:intron | 20.0% |
| !! | CAAAGATTTGTCAAATATAT+AGG | + | chr2_2:64456313-64456332 | None:intergenic | 20.0% |
| !! | TTACTTTCTAATATACTTCA+TGG | - | chr2_2:64456845-64456864 | Msa0264530:intron | 20.0% |
| !! | TTTCTTAAACAAATTAAGCT+AGG | - | chr2_2:64457228-64457247 | Msa0264530:intron | 20.0% |
| !! | AATTTAAAAGGTAAAGTGTA+AGG | - | chr2_2:64457347-64457366 | Msa0264530:exon | 20.0% |
| !!! | TTTCATTTTTTCAACATCTA+AGG | - | chr2_2:64457408-64457427 | Msa0264530:five_prime_UTR | 20.0% |
| !!! | TTCATTTTTTCAACATCTAA+GGG | - | chr2_2:64457409-64457428 | Msa0264530:five_prime_UTR | 20.0% |
| !!! | GTTGATTTTTTTTTGTTCTG+AGG | - | chr2_2:64454601-64454620 | Msa0264530:three_prime_UTR | 25.0% |
| !!! | ACCATTTTCTAGAAATTGTT+GGG | + | chr2_2:64454808-64454827 | None:intergenic | 25.0% |
| !!! | TACCATTTTCTAGAAATTGT+TGG | + | chr2_2:64454809-64454828 | None:intergenic | 25.0% |
| ! | TTAATGTTGACAATTTCAAG+AGG | + | chr2_2:64455058-64455077 | None:intergenic | 25.0% |
| ! | ATTGTCAAATACCATCTATA+CGG | - | chr2_2:64455613-64455632 | Msa0264530:intron | 25.0% |
| ! | ATATTGCAAAAAATACTGGT+TGG | + | chr2_2:64455875-64455894 | None:intergenic | 25.0% |
| ! | TCGAATATTGCAAAAAATAC+TGG | + | chr2_2:64455879-64455898 | None:intergenic | 25.0% |
| !!! | TTGATTTGTTTTCTATCTCA+CGG | - | chr2_2:64456446-64456465 | Msa0264530:intron | 25.0% |
| !! | ATTTAATTTCTACAAAGGCA+AGG | + | chr2_2:64456661-64456680 | None:intergenic | 25.0% |
| !! | TCCTCATTTAATTTCTACAA+AGG | + | chr2_2:64456666-64456685 | None:intergenic | 25.0% |
| !!! | ATTACTAGAAATGCTAGTTT+TGG | + | chr2_2:64456715-64456734 | None:intergenic | 25.0% |
| ! | AAGTATTTGCAATGTTTGTA+TGG | + | chr2_2:64456892-64456911 | None:intergenic | 25.0% |
| ! | AAAAAGAGTTATGAGGTTAA+TGG | - | chr2_2:64457007-64457026 | Msa0264530:intron | 25.0% |
| ! | TAAACAAATTAAGCTAGGTT+TGG | - | chr2_2:64457233-64457252 | Msa0264530:intron | 25.0% |
| !!! | ATTTCTTTTTCGACATCTAA+AGG | - | chr2_2:64457378-64457397 | Msa0264530:five_prime_UTR | 25.0% |
| AATCTGAAAGCAACTTACAA+TGG | - | chr2_2:64454510-64454529 | Msa0264530:three_prime_UTR | 30.0% | |
| !! | CCATTTTCTAGAAATTGTTG+GGG | + | chr2_2:64454807-64454826 | None:intergenic | 30.0% |
| ATCATAGTGTTGTCAAATAG+TGG | - | chr2_2:64455089-64455108 | Msa0264530:intron | 30.0% | |
| TTGTCAAATAGTGGCTATAA+CGG | - | chr2_2:64455098-64455117 | Msa0264530:intron | 30.0% | |
| ! | TTGGATTTGTTCCCAAATAA+CGG | - | chr2_2:64455137-64455156 | Msa0264530:CDS | 30.0% |
| TTGTACTAAATCTCTGATTG+TGG | - | chr2_2:64455281-64455300 | Msa0264530:intron | 30.0% | |
| ATTCAAATTCTGCTATGCTA+TGG | - | chr2_2:64455318-64455337 | Msa0264530:intron | 30.0% | |
| ACTTTACTGTTGTCAAATAG+CGG | - | chr2_2:64455705-64455724 | Msa0264530:intron | 30.0% | |
| !! | GCAATCGTTTTTCATGTTAT+TGG | - | chr2_2:64456056-64456075 | Msa0264530:intron | 30.0% |
| AGGTAGCTTATAAGTAATAC+TGG | + | chr2_2:64456085-64456104 | None:intergenic | 30.0% | |
| ! | ATTGCTGTTAACTGAAAGAT+TGG | - | chr2_2:64456177-64456196 | Msa0264530:intron | 30.0% |
| AGGAATTATTGGTGGAATAT+GGG | - | chr2_2:64456258-64456277 | Msa0264530:intron | 30.0% | |
| GCACAAGATATAAAGAAAAC+AGG | + | chr2_2:64456600-64456619 | None:intergenic | 30.0% | |
| GCCTTTGTAGAAATTAAATG+AGG | - | chr2_2:64456662-64456681 | Msa0264530:intron | 30.0% | |
| AAAATGCAAATGTGTCTGTT+AGG | - | chr2_2:64456736-64456755 | Msa0264530:intron | 30.0% | |
| ! | CAGATATCTAATTTGCAGTT+TGG | + | chr2_2:64456775-64456794 | None:intergenic | 30.0% |
| !!! | TTTGTTCTTTTTTTCCTCCA+AGG | - | chr2_2:64456797-64456816 | Msa0264530:intron | 30.0% |
| !!! | TTGTTCTTTTTTTCCTCCAA+GGG | - | chr2_2:64456798-64456817 | Msa0264530:intron | 30.0% |
| AGTTATGAGGTTAATGGAAA+TGG | - | chr2_2:64457013-64457032 | Msa0264530:intron | 30.0% | |
| AGGTTAATGGAAATGGTAAA+AGG | - | chr2_2:64457020-64457039 | Msa0264530:intron | 30.0% | |
| !! | TCATTGTTTGGTGATTTGTT+AGG | + | chr2_2:64457076-64457095 | None:intergenic | 30.0% |
| AAATCACCAAACAATGATCA+AGG | - | chr2_2:64457079-64457098 | Msa0264530:CDS | 30.0% | |
| AATCACCAAACAATGATCAA+GGG | - | chr2_2:64457080-64457099 | Msa0264530:CDS | 30.0% | |
| AATACAGACATAAAAGCTCA+GGG | + | chr2_2:64457271-64457290 | None:intergenic | 30.0% | |
| AAATACAGACATAAAAGCTC+AGG | + | chr2_2:64457272-64457291 | None:intergenic | 30.0% | |
| ! | AGCTTTTATGTCTGTATTTG+TGG | - | chr2_2:64457273-64457292 | Msa0264530:intron | 30.0% |
| ! | TCTGTATTTGTGGTTCTATT+AGG | - | chr2_2:64457283-64457302 | Msa0264530:intron | 30.0% |
| ! | AGTGAGGAGTGTAATTTAAA+AGG | - | chr2_2:64457335-64457354 | Msa0264530:CDS | 30.0% |
| AAATCAGATTTGGAGGAACT+AGG | - | chr2_2:64454442-64454461 | Msa0264530:three_prime_UTR | 35.0% | |
| !!! | AAGCGTTTTGAAGAACTTGA+AGG | - | chr2_2:64454549-64454568 | Msa0264530:three_prime_UTR | 35.0% |
| ! | CAACAATAACGATTTGGGTT+TGG | + | chr2_2:64454585-64454604 | None:intergenic | 35.0% |
| AGTTGAGAAAGTAGAAGAAG+AGG | - | chr2_2:64454754-64454773 | Msa0264530:CDS | 35.0% | |
| !! | GTCAAGCATGATGTTAGTTT+TGG | - | chr2_2:64454776-64454795 | Msa0264530:CDS | 35.0% |
| ! | CCCCAACAATTTCTAGAAAA+TGG | - | chr2_2:64454804-64454823 | Msa0264530:CDS | 35.0% |
| TGCATATTGGTCATGAATTC+TGG | - | chr2_2:64454876-64454895 | Msa0264530:CDS | 35.0% | |
| GCATATTGGTCATGAATTCT+GGG | - | chr2_2:64454877-64454896 | Msa0264530:CDS | 35.0% | |
| CATCAGTCATTGCTCAAAAT+TGG | + | chr2_2:64454911-64454930 | None:intergenic | 35.0% | |
| !! | ATCTTGGTGTTGTCAAATAG+TGG | - | chr2_2:64454997-64455016 | Msa0264530:intron | 35.0% |
| TTACGCTATAGCCGTTATTT+GGG | + | chr2_2:64455151-64455170 | None:intergenic | 35.0% | |
| TGAACCAGTGTTATCAATTG+CGG | - | chr2_2:64455178-64455197 | Msa0264530:CDS | 35.0% | |
| TATAGTGATGCTATAGCACT+TGG | - | chr2_2:64455428-64455447 | Msa0264530:intron | 35.0% | |
| CTTAATGTGACAAGTTTGAG+AGG | + | chr2_2:64455676-64455695 | None:intergenic | 35.0% | |
| TCAAACTCTGAACTTTGAAC+AGG | + | chr2_2:64456105-64456124 | None:intergenic | 35.0% | |
| TGAATTTCTGAATTGCGAGA+TGG | - | chr2_2:64456230-64456249 | Msa0264530:intron | 35.0% | |
| CAGGAATTATTGGTGGAATA+TGG | - | chr2_2:64456257-64456276 | Msa0264530:intron | 35.0% | |
| CTTTCGACATATATGTAGTG+TGG | - | chr2_2:64456469-64456488 | Msa0264530:intron | 35.0% | |
| TATATGTAGTGTGGTCATAG+TGG | - | chr2_2:64456478-64456497 | Msa0264530:intron | 35.0% | |
| TTCAAACTCACATCAACAGT+TGG | + | chr2_2:64456560-64456579 | None:intergenic | 35.0% | |
| AAGGCTACAGCATTAGAATT+CGG | + | chr2_2:64456642-64456661 | None:intergenic | 35.0% | |
| !!! | AGAAATGCTAGTTTTGGCTA+CGG | + | chr2_2:64456709-64456728 | None:intergenic | 35.0% |
| GAAAATAACTCTTCAGCAGA+AGG | - | chr2_2:64456962-64456981 | Msa0264530:intron | 35.0% | |
| CGTGAACAAAAAGAGTTATG+AGG | - | chr2_2:64457000-64457019 | Msa0264530:intron | 35.0% | |
| TTGTTCCCTTGATCATTGTT+TGG | + | chr2_2:64457088-64457107 | None:intergenic | 35.0% | |
| AAAAAATCATCGCCGAACAA+TGG | - | chr2_2:64457106-64457125 | Msa0264530:CDS | 35.0% | |
| AAAGAACCCAAACCATTGTT+CGG | + | chr2_2:64457121-64457140 | None:intergenic | 35.0% | |
| !! | GATTTGACTTCTCTAAAGTG+AGG | - | chr2_2:64457319-64457338 | Msa0264530:intron | 35.0% |
| ! | TTTTCAACATCTAAGGGTTG+AGG | - | chr2_2:64457415-64457434 | Msa0264530:five_prime_UTR | 35.0% |
| ! | CCAAATCTGATTTGTGAACG+CGG | + | chr2_2:64454435-64454454 | None:intergenic | 40.0% |
| CGTTCACAAATCAGATTTGG+AGG | - | chr2_2:64454435-64454454 | Msa0264530:three_prime_UTR | 40.0% | |
| GATTTGGAGGAACTAGGTTA+AGG | - | chr2_2:64454448-64454467 | Msa0264530:three_prime_UTR | 40.0% | |
| AGGAACTAGGTTAAGGTTGT+TGG | - | chr2_2:64454455-64454474 | Msa0264530:three_prime_UTR | 40.0% | |
| TTGAAATTCACGGTCTTCTG+TGG | - | chr2_2:64454943-64454962 | Msa0264530:intron | 40.0% | |
| ! | TAGCGCGGTTTAGTTCAAAT+TGG | - | chr2_2:64455023-64455042 | Msa0264530:intron | 40.0% |
| GTTACGCTATAGCCGTTATT+TGG | + | chr2_2:64455152-64455171 | None:intergenic | 40.0% | |
| !! | TACGAAGTGTTGTCGAATAG+TGG | - | chr2_2:64455404-64455423 | Msa0264530:intron | 40.0% |
| TGTTGTCAATCGTGTATCAC+AGG | + | chr2_2:64455470-64455489 | None:intergenic | 40.0% | |
| AGATGGTGTGCAGGAATTAT+TGG | - | chr2_2:64456247-64456266 | Msa0264530:intron | 40.0% | |
| ATTCGACCTTTAAATGCTCC+AGG | + | chr2_2:64456518-64456537 | None:intergenic | 40.0% | |
| !!! | GAAATGCTAGTTTTGGCTAC+GGG | + | chr2_2:64456708-64456727 | None:intergenic | 40.0% |
| ATGCAAATGTGTCTGTTAGG+TGG | - | chr2_2:64456739-64456758 | Msa0264530:intron | 40.0% | |
| TGCAAATGTGTCTGTTAGGT+GGG | - | chr2_2:64456740-64456759 | Msa0264530:intron | 40.0% | |
| ATAGAGAATCTTCAGACCCT+TGG | + | chr2_2:64456817-64456836 | None:intergenic | 40.0% | |
| TTATACACACAGTACGTGAG+AGG | + | chr2_2:64456915-64456934 | None:intergenic | 40.0% | |
| GGTTCTTTCAAAAAACCGTC+TGG | - | chr2_2:64457133-64457152 | Msa0264530:CDS | 40.0% | |
| !!! | GCTAGGTTTGGTTTTGTTTC+TGG | - | chr2_2:64457245-64457264 | Msa0264530:intron | 40.0% |
| CCGCGTTCACAAATCAGATT+TGG | - | chr2_2:64454432-64454451 | Msa0264530:three_prime_UTR | 45.0% | |
| GTCAAATAGTGGCTATAGCG+CGG | - | chr2_2:64455008-64455027 | Msa0264530:intron | 45.0% | |
| ! | CGATCCGCAATTGATAACAC+TGG | + | chr2_2:64455185-64455204 | None:intergenic | 45.0% |
| GTGTTATCAATTGCGGATCG+CGG | - | chr2_2:64455185-64455204 | Msa0264530:CDS | 45.0% | |
| TGGTGTGCAGGAATTATTGG+TGG | - | chr2_2:64456250-64456269 | Msa0264530:intron | 45.0% | |
| ! | TGTAGTGTGGTCATAGTGGA+AGG | - | chr2_2:64456482-64456501 | Msa0264530:intron | 45.0% |
| ACCTTTAAATGCTCCAGGAC+GGG | + | chr2_2:64456513-64456532 | None:intergenic | 45.0% | |
| GACCTTTAAATGCTCCAGGA+CGG | + | chr2_2:64456514-64456533 | None:intergenic | 45.0% | |
| ! | TGTCTGTTAGGTGGGTTTCT+TGG | - | chr2_2:64456748-64456767 | Msa0264530:intron | 45.0% |
| ATCATCGCCGAACAATGGTT+TGG | - | chr2_2:64457111-64457130 | Msa0264530:CDS | 45.0% | |
| TCATCGCCGAACAATGGTTT+GGG | - | chr2_2:64457112-64457131 | Msa0264530:CDS | 45.0% | |
| ! | CAGTCTAGCTTATCTCCAGA+CGG | + | chr2_2:64457151-64457170 | None:intergenic | 45.0% |
| CGGCGCTATTCAGTACAGAT+TGG | - | chr2_2:64455118-64455137 | Msa0264530:intron | 50.0% | |
| TTTGCTTTACTGCCGCGCTA+TGG | - | chr2_2:64455229-64455248 | Msa0264530:intron | 50.0% | |
| ACCATCTATACGGCGCTGTT+TGG | - | chr2_2:64455623-64455642 | Msa0264530:intron | 50.0% | |
| ACCAAACAGCGCCGTATAGA+TGG | + | chr2_2:64455627-64455646 | None:intergenic | 50.0% | |
| TGAATTGCGAGATGGTGTGC+AGG | - | chr2_2:64456238-64456257 | Msa0264530:intron | 50.0% | |
| CCTTTAAATGCTCCAGGACG+GGG | + | chr2_2:64456512-64456531 | None:intergenic | 50.0% | |
| GAGAATCTTCAGACCCTTGG+AGG | + | chr2_2:64456814-64456833 | None:intergenic | 50.0% | |
| CGTCTGGAGATAAGCTAGAC+TGG | - | chr2_2:64457149-64457168 | Msa0264530:CDS | 50.0% | |
| GTTACTGCAGCACCATAGCG+CGG | + | chr2_2:64455244-64455263 | None:intergenic | 55.0% | |
| !! | GCGCTATGGTGCTGCAGTAA+CGG | - | chr2_2:64455243-64455262 | Msa0264530:intron | 55.0% |
| ! | CCCCGTCCTGGAGCATTTAA+AGG | - | chr2_2:64456509-64456528 | Msa0264530:intron | 55.0% |
| GTGGAAGGTGATCCCCGTCC+TGG | - | chr2_2:64456497-64456516 | Msa0264530:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 64454370 | 64457522 | 64454370 | ID=Msa0264530;Name=Msa0264530 |
| chr2_2 | mRNA | 64454370 | 64457522 | 64454370 | ID=Msa0264530-mRNA-1;Parent=Msa0264530;Name=Msa0264530-mRNA-1;_AED=0.18;_eAED=0.18;_QI=159|1|1|1|1|1|5|312|187 |
| chr2_2 | exon | 64454370 | 64454931 | 64454370 | ID=Msa0264530-mRNA-1:exon:20139;Parent=Msa0264530-mRNA-1 |
| chr2_2 | exon | 64455135 | 64455220 | 64455135 | ID=Msa0264530-mRNA-1:exon:20138;Parent=Msa0264530-mRNA-1 |
| chr2_2 | exon | 64455324 | 64455405 | 64455324 | ID=Msa0264530-mRNA-1:exon:20137;Parent=Msa0264530-mRNA-1 |
| chr2_2 | exon | 64457067 | 64457170 | 64457067 | ID=Msa0264530-mRNA-1:exon:20136;Parent=Msa0264530-mRNA-1 |
| chr2_2 | exon | 64457322 | 64457522 | 64457322 | ID=Msa0264530-mRNA-1:exon:20135;Parent=Msa0264530-mRNA-1 |
| chr2_2 | five_prime_UTR | 64457364 | 64457522 | 64457364 | ID=Msa0264530-mRNA-1:five_prime_utr;Parent=Msa0264530-mRNA-1 |
| chr2_2 | CDS | 64457322 | 64457363 | 64457322 | ID=Msa0264530-mRNA-1:cds;Parent=Msa0264530-mRNA-1 |
| chr2_2 | CDS | 64457067 | 64457170 | 64457067 | ID=Msa0264530-mRNA-1:cds;Parent=Msa0264530-mRNA-1 |
| chr2_2 | CDS | 64455324 | 64455405 | 64455324 | ID=Msa0264530-mRNA-1:cds;Parent=Msa0264530-mRNA-1 |
| chr2_2 | CDS | 64455135 | 64455220 | 64455135 | ID=Msa0264530-mRNA-1:cds;Parent=Msa0264530-mRNA-1 |
| chr2_2 | CDS | 64454682 | 64454931 | 64454682 | ID=Msa0264530-mRNA-1:cds;Parent=Msa0264530-mRNA-1 |
| chr2_2 | three_prime_UTR | 64454370 | 64454681 | 64454370 | ID=Msa0264530-mRNA-1:three_prime_utr;Parent=Msa0264530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
