Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764690 | G7K703 | 93.607 | 219 | 9 | 1 | 1 | 219 | 1 | 214 | 2.52e-133 | 382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0764690 | 0.809582 | 1.761975e-50 | -8.615850e-47 |
| Msa0008410 | Msa0764690 | 0.819664 | 1.031622e-52 | -8.615850e-47 |
| Msa0015140 | Msa0764690 | 0.812863 | 3.422265e-51 | -8.615850e-47 |
| Msa0030300 | Msa0764690 | 0.808911 | 2.454594e-50 | -8.615850e-47 |
| Msa0047280 | Msa0764690 | 0.807040 | 6.138213e-50 | -8.615850e-47 |
| Msa0053700 | Msa0764690 | 0.802927 | 4.447566e-49 | -8.615850e-47 |
| Msa0055150 | Msa0764690 | 0.806289 | 8.843651e-50 | -8.615850e-47 |
| Msa0057140 | Msa0764690 | 0.804514 | 2.082719e-49 | -8.615850e-47 |
| Msa0070170 | Msa0764690 | 0.800389 | 1.474730e-48 | -8.615850e-47 |
| Msa0097950 | Msa0764690 | 0.811929 | 5.476018e-51 | -8.615850e-47 |
| Msa0108870 | Msa0764690 | 0.824094 | 9.722613e-54 | -8.615850e-47 |
| Msa0115370 | Msa0764690 | 0.800307 | 1.532445e-48 | -8.615850e-47 |
| Msa0603540 | Msa0764690 | 0.809989 | 1.440789e-50 | -8.615850e-47 |
| Msa0603670 | Msa0764690 | 0.806193 | 9.262831e-50 | -8.615850e-47 |
| Msa0617660 | Msa0764690 | 0.803475 | 3.425221e-49 | -8.615850e-47 |
| Msa0620330 | Msa0764690 | 0.802681 | 4.997889e-49 | -8.615850e-47 |
| Msa0645070 | Msa0764690 | 0.808164 | 3.543319e-50 | -8.615850e-47 |
| Msa0647930 | Msa0764690 | 0.822467 | 2.332699e-53 | -8.615850e-47 |
| Msa0647950 | Msa0764690 | 0.817616 | 3.006509e-52 | -8.615850e-47 |
| Msa0652300 | Msa0764690 | 0.807846 | 4.141173e-50 | -8.615850e-47 |
| Msa0662170 | Msa0764690 | 0.806260 | 8.968810e-50 | -8.615850e-47 |
| Msa0694840 | Msa0764690 | 0.819636 | 1.046414e-52 | -8.615850e-47 |
| Msa0702270 | Msa0764690 | 0.806849 | 6.735351e-50 | -8.615850e-47 |
| Msa0764690 | Msa0853950 | 0.801046 | 1.082834e-48 | -8.615850e-47 |
| Msa0764690 | Msa0881580 | 0.805719 | 1.165228e-49 | -8.615850e-47 |
| Msa0764690 | Msa0888940 | 0.810229 | 1.278549e-50 | -8.615850e-47 |
| Msa0764690 | Msa0899350 | 0.810115 | 1.353168e-50 | -8.615850e-47 |
| Msa0764690 | Msa0922030 | 0.816815 | 4.552884e-52 | -8.615850e-47 |
| Msa0764690 | Msa0944660 | 0.800597 | 1.337323e-48 | -8.615850e-47 |
| Msa0764690 | Msa0967370 | 0.817607 | 3.020302e-52 | -8.615850e-47 |
| Msa0764690 | Msa0980940 | 0.825230 | 5.249359e-54 | -8.615850e-47 |
| Msa0764690 | Msa1025260 | 0.834544 | 2.818835e-56 | -8.615850e-47 |
| Msa0764690 | Msa1029970 | 0.808424 | 3.118815e-50 | -8.615850e-47 |
| Msa0764690 | Msa1109350 | 0.837192 | 6.007727e-57 | -8.615850e-47 |
| Msa0764690 | Msa1113590 | 0.802875 | 4.557730e-49 | -8.615850e-47 |
| Msa0764690 | Msa1130670 | -0.822339 | 2.497772e-53 | -8.615850e-47 |
| Msa0764690 | Msa1157740 | 0.801702 | 7.950677e-49 | -8.615850e-47 |
| Msa0764690 | Msa1188600 | -0.802636 | 5.106716e-49 | -8.615850e-47 |
| Msa0764690 | Msa1278900 | 0.800084 | 1.701637e-48 | -8.615850e-47 |
| Msa0764690 | Msa1279590 | 0.806848 | 6.738209e-50 | -8.615850e-47 |
| Msa0764690 | Msa1280620 | 0.817326 | 3.495544e-52 | -8.615850e-47 |
| Msa0764690 | Msa1294960 | 0.802400 | 5.710976e-49 | -8.615850e-47 |
| Msa0764690 | Msa1297600 | 0.808380 | 3.187274e-50 | -8.615850e-47 |
| Msa0764690 | Msa1359560 | 0.802735 | 4.872357e-49 | -8.615850e-47 |
| Msa0764690 | Msa1389850 | 0.802006 | 6.885737e-49 | -8.615850e-47 |
| Msa0764690 | Msa1396250 | 0.816426 | 5.564844e-52 | -8.615850e-47 |
| Msa0764690 | Msa1415940 | 0.803803 | 2.928180e-49 | -8.615850e-47 |
| Msa0127850 | Msa0764690 | 0.807119 | 5.904559e-50 | -8.615850e-47 |
| Msa0140170 | Msa0764690 | 0.805464 | 1.317976e-49 | -8.615850e-47 |
| Msa0164370 | Msa0764690 | 0.800031 | 1.744369e-48 | -8.615850e-47 |
| Msa0221600 | Msa0764690 | 0.803160 | 3.979949e-49 | -8.615850e-47 |
| Msa0410300 | Msa0764690 | 0.804785 | 1.828190e-49 | -8.615850e-47 |
| Msa0461590 | Msa0764690 | 0.801225 | 9.953995e-49 | -8.615850e-47 |
| Msa0482180 | Msa0764690 | 0.805832 | 1.103328e-49 | -8.615850e-47 |
| Msa0259270 | Msa0764690 | 0.807310 | 5.380412e-50 | -8.615850e-47 |
| Msa0264530 | Msa0764690 | 0.808140 | 3.584345e-50 | -8.615850e-47 |
| Msa0556790 | Msa0764690 | 0.808166 | 3.540265e-50 | -8.615850e-47 |
| Msa0576730 | Msa0764690 | 0.809263 | 2.062566e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764690 | MtrunA17_Chr5g0415211 | 93.607 | 219 | 9 | 1 | 1 | 219 | 1 | 214 | 4.84e-137 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764690 | AT1G69980.1 | 46.818 | 220 | 101 | 3 | 1 | 219 | 1 | 205 | 2.78e-60 | 188 |
Find 44 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAATGGTTTGGAGTATTT+TGG | 0.171663 | 5_2:+25067389 | Msa0764690:five_prime_UTR |
| CATATAGATGAACACGTTTA+TGG | 0.204792 | 5_2:+25069518 | Msa0764690:CDS |
| AGCAGCAATGGGTTGAATTA+TGG | 0.285103 | 5_2:-25071398 | None:intergenic |
| AATAGGAAATTTCGAGATTC+AGG | 0.291866 | 5_2:+25071318 | Msa0764690:three_prime_UTR |
| TGCTAATCTGATCAATTCTT+AGG | 0.305245 | 5_2:+25071417 | Msa0764690:three_prime_UTR |
| ATCAATTCTTAGGTAAAGTT+AGG | 0.351611 | 5_2:+25071427 | Msa0764690:three_prime_UTR |
| CAACCTTCAATACTCGCTTT+AGG | 0.358816 | 5_2:+25067519 | Msa0764690:CDS |
| CTTCACATTTGAATGGAATT+CGG | 0.363187 | 5_2:-25069406 | None:intergenic |
| TCTGAAAATCGACATGGGTT+TGG | 0.368655 | 5_2:+25067682 | Msa0764690:CDS |
| ACAGTCACAGAGAACATTAC+TGG | 0.393318 | 5_2:+25069556 | Msa0764690:CDS |
| AAGAAGGCGGCTGCCATGTC+TGG | 0.412691 | 5_2:+25071164 | Msa0764690:CDS |
| TTAATCTCTTCACATTTGAA+TGG | 0.418906 | 5_2:-25069413 | None:intergenic |
| TCAGAAAACTCGGTCTACTT+TGG | 0.434982 | 5_2:+25069469 | Msa0764690:CDS |
| ATGGCGAAGAAGAACAGAAA+TGG | 0.436292 | 5_2:-25067483 | None:intergenic |
| TGACCTAAAGCGAGTATTGA+AGG | 0.444323 | 5_2:-25067522 | None:intergenic |
| AAATATCGCTGTAGTGAGAC+AGG | 0.446528 | 5_2:+25069380 | Msa0764690:CDS |
| CCATTGAGTGAAATTATTTG+AGG | 0.459084 | 5_2:-25071474 | None:intergenic |
| ATAAGAAACAGAGAATGGTT+TGG | 0.467011 | 5_2:+25067379 | Msa0764690:five_prime_UTR |
| TTGATCAGATTAGCAGCAAT+GGG | 0.473546 | 5_2:-25071409 | None:intergenic |
| GAAGAGAAGTTGTCAGTGCT+TGG | 0.474771 | 5_2:+25069650 | Msa0764690:CDS |
| CGCTTCAGATAATAAGTCAC+AGG | 0.478777 | 5_2:+25069589 | Msa0764690:CDS |
| TGGTTATGTTGCAGCAGGAA+GGG | 0.479759 | 5_2:+25071184 | Msa0764690:CDS |
| AAGGAGCACAATCAAAAGTA+AGG | 0.483222 | 5_2:-25067750 | None:intergenic |
| AACTTCTCTTCAGTATCTGC+AGG | 0.509140 | 5_2:-25069638 | None:intergenic |
| ATAAAATAAGAAACAGAGAA+TGG | 0.524566 | 5_2:+25067374 | Msa0764690:five_prime_UTR |
| CTGGTTATGTTGCAGCAGGA+AGG | 0.526430 | 5_2:+25071183 | Msa0764690:CDS |
| GGTTATGTTGCAGCAGGAAG+GGG | 0.534822 | 5_2:+25071185 | Msa0764690:CDS |
| AATAAATCGCATCGTACAGC+AGG | 0.536477 | 5_2:-25071238 | None:intergenic |
| ATTGATCAGATTAGCAGCAA+TGG | 0.537753 | 5_2:-25071410 | None:intergenic |
| TCCCTGCATCTACTCTGAAA+AGG | 0.539900 | 5_2:+25067786 | Msa0764690:CDS |
| AGGTTGATGAAATATAGAAA+TGG | 0.540588 | 5_2:-25067502 | None:intergenic |
| AAAGTAAGGTTACTTCCTGA+AGG | 0.543660 | 5_2:-25067736 | None:intergenic |
| CTGTGACTTATTATCTGAAG+CGG | 0.556905 | 5_2:-25069588 | None:intergenic |
| TGAAGAAAATAAAATTAGTG+TGG | 0.564322 | 5_2:-25071261 | None:intergenic |
| ATGTCTGGTTATGTTGCAGC+AGG | 0.568805 | 5_2:+25071179 | Msa0764690:CDS |
| AAACAAAACCTCAGAAAACT+CGG | 0.582634 | 5_2:+25069459 | Msa0764690:CDS |
| GAGTAGATGCAGGGAACACA+AGG | 0.584511 | 5_2:-25067778 | None:intergenic |
| CAGGGAACACAAGGACCAGA+AGG | 0.593395 | 5_2:-25067769 | None:intergenic |
| TGCTGCAACATAACCAGACA+TGG | 0.629175 | 5_2:-25071177 | None:intergenic |
| GAAGGGGTCAGACAAACTCT+CGG | 0.652174 | 5_2:+25071201 | Msa0764690:CDS |
| GAAGATTCTGAAAATCGACA+TGG | 0.672911 | 5_2:+25067676 | Msa0764690:CDS |
| AAGATTCTGAAAATCGACAT+GGG | 0.673238 | 5_2:+25067677 | Msa0764690:CDS |
| AGAGATTAAACATTCAACGA+AGG | 0.680316 | 5_2:+25069427 | Msa0764690:CDS |
| AATATCGCTGTAGTGAGACA+GGG | 0.738319 | 5_2:+25069381 | Msa0764690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATATTTTATTTTGTAAT+AGG | + | chr5_2:25071301-25071320 | Msa0764690:three_prime_UTR | 10.0% |
| !!! | TTTTTCTTGTTATTTGAATT+GGG | + | chr5_2:25067647-25067666 | Msa0764690:intron | 15.0% |
| !!! | TATAATTCTAAAATAACAGA+AGG | - | chr5_2:25067831-25067850 | None:intergenic | 15.0% |
| !! | AATTGAAGTTATTCATAAAT+AGG | + | chr5_2:25067850-25067869 | Msa0764690:intron | 15.0% |
| !! | ATTGAAGTTATTCATAAATA+GGG | + | chr5_2:25067851-25067870 | Msa0764690:intron | 15.0% |
| !!! | TTTTTGATAGAATAAAGTTT+AGG | - | chr5_2:25068244-25068263 | None:intergenic | 15.0% |
| !!! | TATAATAATAAATCTGAGAT+AGG | - | chr5_2:25069696-25069715 | None:intergenic | 15.0% |
| !! | AATATATATGCATATATGAA+TGG | - | chr5_2:25069896-25069915 | None:intergenic | 15.0% |
| !! | AAATCAAACATCTTAAAATT+TGG | + | chr5_2:25070293-25070312 | Msa0764690:intron | 15.0% |
| !! | AATCAAACATCTTAAAATTT+GGG | + | chr5_2:25070294-25070313 | Msa0764690:intron | 15.0% |
| !! | ATAAAATAAGAAACAGAGAA+TGG | + | chr5_2:25067374-25067393 | Msa0764690:five_prime_UTR | 20.0% |
| !!! | CTTTTTCTTGTTATTTGAAT+TGG | + | chr5_2:25067646-25067665 | Msa0764690:intron | 20.0% |
| !!! | AACATTTTGAAATTAGCTAA+TGG | + | chr5_2:25068590-25068609 | Msa0764690:intron | 20.0% |
| !!! | ACATTTTGAAATTAGCTAAT+GGG | + | chr5_2:25068591-25068610 | Msa0764690:intron | 20.0% |
| !! | TAGTTAACAATAAAGTAAAG+AGG | - | chr5_2:25069326-25069345 | None:intergenic | 20.0% |
| !! | TGAAGAAAATAAAATTAGTG+TGG | - | chr5_2:25071264-25071283 | None:intergenic | 20.0% |
| !!! | TGAATTCATTGCTTTTTCAT+CGG | - | chr5_2:25067442-25067461 | None:intergenic | 25.0% |
| ! | AACAGAAATGGAAGAAAAAT+TGG | - | chr5_2:25067474-25067493 | None:intergenic | 25.0% |
| !!! | AGGTTGATGAAATATAGAAA+TGG | - | chr5_2:25067505-25067524 | None:intergenic | 25.0% |
| !!! | ACAATTAAGGTTTTGAATAG+TGG | + | chr5_2:25068007-25068026 | Msa0764690:intron | 25.0% |
| ! | CATAATTCTCTGTAATATCA+AGG | - | chr5_2:25068071-25068090 | None:intergenic | 25.0% |
| ! | CTTGATATTACAGAGAATTA+TGG | + | chr5_2:25068069-25068088 | Msa0764690:intron | 25.0% |
| ! | GAATAAAGTTTAGGTAAGTT+AGG | - | chr5_2:25068235-25068254 | None:intergenic | 25.0% |
| ! | TAGAAAAGAAAAGAGAATCA+TGG | + | chr5_2:25068265-25068284 | Msa0764690:intron | 25.0% |
| !! | ATGCTTTACAAAACTTCTTT+TGG | - | chr5_2:25068989-25069008 | None:intergenic | 25.0% |
| !! | ATCTTTTAAATTGCTCGAAT+TGG | + | chr5_2:25069092-25069111 | Msa0764690:intron | 25.0% |
| !! | TCTTTTAAATTGCTCGAATT+GGG | + | chr5_2:25069093-25069112 | Msa0764690:intron | 25.0% |
| ! | ATATGGTTCATCTATTTAAG+CGG | - | chr5_2:25069136-25069155 | None:intergenic | 25.0% |
| !!! | ATTGATTTTATGTCTACGTT+AGG | + | chr5_2:25069210-25069229 | Msa0764690:intron | 25.0% |
| !! | TCTTTGTTATATGTATGCTT+GGG | + | chr5_2:25069248-25069267 | Msa0764690:intron | 25.0% |
| !!! | TTGTTAACTACAAGCTTTTT+TGG | + | chr5_2:25069336-25069355 | Msa0764690:intron | 25.0% |
| !!! | TGTTAACTACAAGCTTTTTT+GGG | + | chr5_2:25069337-25069356 | Msa0764690:intron | 25.0% |
| ! | TTAATCTCTTCACATTTGAA+TGG | - | chr5_2:25069416-25069435 | None:intergenic | 25.0% |
| !!! | GTTTGGTTTTTTAAATCTCA+AGG | + | chr5_2:25069849-25069868 | Msa0764690:intron | 25.0% |
| ! | TTTATTAGCAATCTGTCAAT+AGG | + | chr5_2:25069963-25069982 | Msa0764690:intron | 25.0% |
| ! | TTATTAGCAATCTGTCAATA+GGG | + | chr5_2:25069964-25069983 | Msa0764690:intron | 25.0% |
| ! | GTCAGTTATGTTCATAAATT+AGG | + | chr5_2:25070131-25070150 | Msa0764690:intron | 25.0% |
| ! | GTTATGTTCATAAATTAGGA+CGG | + | chr5_2:25070135-25070154 | Msa0764690:intron | 25.0% |
| ! | GATAAATCTTATTCTGTGTT+CGG | + | chr5_2:25070179-25070198 | Msa0764690:intron | 25.0% |
| !!! | CCTTAAAAAGTGTTTATAAG+TGG | - | chr5_2:25070371-25070390 | None:intergenic | 25.0% |
| !!! | CCACTTATAAACACTTTTTA+AGG | + | chr5_2:25070368-25070387 | Msa0764690:intron | 25.0% |
| ! | ATCCAATACAAATCCAAATA+TGG | + | chr5_2:25070419-25070438 | Msa0764690:intron | 25.0% |
| ! | TACCATATTTGGATTTGTAT+TGG | - | chr5_2:25070424-25070443 | None:intergenic | 25.0% |
| ! | CCAATGTATAATACCATATT+TGG | - | chr5_2:25070435-25070454 | None:intergenic | 25.0% |
| ! | CCAAATATGGTATTATACAT+TGG | + | chr5_2:25070432-25070451 | Msa0764690:intron | 25.0% |
| ! | ATTATACATTGGAATCTCTA+AGG | + | chr5_2:25070443-25070462 | Msa0764690:intron | 25.0% |
| !!! | GTATTGTTATGTTAGTTTGT+TGG | + | chr5_2:25070594-25070613 | Msa0764690:intron | 25.0% |
| !!! | TATGTTAGTTTGTTGGAATT+AGG | + | chr5_2:25070601-25070620 | Msa0764690:intron | 25.0% |
| !!! | CATTGTTTTTCTTAAATTCC+CGG | - | chr5_2:25070659-25070678 | None:intergenic | 25.0% |
| ! | ATCCTATAATATCAACACAA+AGG | - | chr5_2:25070983-25071002 | None:intergenic | 25.0% |
| ! | ATCAATTCTTAGGTAAAGTT+AGG | + | chr5_2:25071427-25071446 | Msa0764690:three_prime_UTR | 25.0% |
| ATAAGAAACAGAGAATGGTT+TGG | + | chr5_2:25067379-25067398 | Msa0764690:five_prime_UTR | 30.0% | |
| ! | AAGATTCTGAAAATCGACAT+GGG | + | chr5_2:25067677-25067696 | Msa0764690:CDS | 30.0% |
| AGTTTCAAAGAAAAACCTTC+AGG | + | chr5_2:25067721-25067740 | Msa0764690:CDS | 30.0% | |
| AACCTTAAGGTGAATAAATC+GGG | - | chr5_2:25067927-25067946 | None:intergenic | 30.0% | |
| CAACCTTAAGGTGAATAAAT+CGG | - | chr5_2:25067928-25067947 | None:intergenic | 30.0% | |
| ACTTGACCAGAAAAAAAGAA+GGG | + | chr5_2:25067967-25067986 | Msa0764690:intron | 30.0% | |
| AAAAAGAAGGGGTTTGAATT+TGG | + | chr5_2:25067979-25067998 | Msa0764690:intron | 30.0% | |
| TATCAAAAACCGTTATGTTG+TGG | + | chr5_2:25068328-25068347 | Msa0764690:intron | 30.0% | |
| AAGCCTTTGATAAGAAATGT+CGG | - | chr5_2:25068365-25068384 | None:intergenic | 30.0% | |
| ! | TTTCTTATCAAAGGCTTGTT+TGG | + | chr5_2:25068368-25068387 | Msa0764690:intron | 30.0% |
| GTAAGACTCACAAAAACAAA+GGG | - | chr5_2:25068771-25068790 | None:intergenic | 30.0% | |
| TGTAAGACTCACAAAAACAA+AGG | - | chr5_2:25068772-25068791 | None:intergenic | 30.0% | |
| ! | ACAAAACTTCTTTTGGATGA+GGG | - | chr5_2:25068982-25069001 | None:intergenic | 30.0% |
| ! | TACAAAACTTCTTTTGGATG+AGG | - | chr5_2:25068983-25069002 | None:intergenic | 30.0% |
| ! | CTCTTTGTTATATGTATGCT+TGG | + | chr5_2:25069247-25069266 | Msa0764690:intron | 30.0% |
| ATGTATAGTACAAAGTGAGA+AGG | - | chr5_2:25069276-25069295 | None:intergenic | 30.0% | |
| !! | TCATTTGCCTTGTTATTCAT+AGG | + | chr5_2:25069300-25069319 | Msa0764690:intron | 30.0% |
| CTTCACATTTGAATGGAATT+CGG | - | chr5_2:25069409-25069428 | None:intergenic | 30.0% | |
| AGAGATTAAACATTCAACGA+AGG | + | chr5_2:25069427-25069446 | Msa0764690:CDS | 30.0% | |
| AAACAAAACCTCAGAAAACT+CGG | + | chr5_2:25069459-25069478 | Msa0764690:CDS | 30.0% | |
| CATATAGATGAACACGTTTA+TGG | + | chr5_2:25069518-25069537 | Msa0764690:CDS | 30.0% | |
| TATTAGCAATCTGTCAATAG+GGG | + | chr5_2:25069965-25069984 | Msa0764690:intron | 30.0% | |
| TTCGGAAAATTGAAGAAGTA+TGG | + | chr5_2:25070197-25070216 | Msa0764690:intron | 30.0% | |
| AAACGGGATGGATATTATTA+AGG | - | chr5_2:25070486-25070505 | None:intergenic | 30.0% | |
| TAAAGCAGAAAGTTAGATCA+TGG | - | chr5_2:25070572-25070591 | None:intergenic | 30.0% | |
| TGATCTAACTTTCTGCTTTA+TGG | + | chr5_2:25070572-25070591 | Msa0764690:intron | 30.0% | |
| CGGGAATTTAAGAAAAACAA+TGG | + | chr5_2:25070657-25070676 | Msa0764690:intron | 30.0% | |
| AAGAACTAACGAGATAAAGA+CGG | - | chr5_2:25070747-25070766 | None:intergenic | 30.0% | |
| TTTGTTCATAGCTTTCTGTT+TGG | + | chr5_2:25070812-25070831 | Msa0764690:intron | 30.0% | |
| TAATATCAACACAAAGGTCA+AGG | - | chr5_2:25070977-25070996 | None:intergenic | 30.0% | |
| ! | GACCTTTGTGTTGATATTAT+AGG | + | chr5_2:25070978-25070997 | Msa0764690:intron | 30.0% |
| AAACCTCATTTAACGACAAA+CGG | - | chr5_2:25071052-25071071 | None:intergenic | 30.0% | |
| TGTTAACCGTGTATATTATG+TGG | + | chr5_2:25071073-25071092 | Msa0764690:intron | 30.0% | |
| CGTATTCCACATAATATACA+CGG | - | chr5_2:25071082-25071101 | None:intergenic | 30.0% | |
| ! | ATTTTCTTGTTGCTCATTAG+CGG | + | chr5_2:25071119-25071138 | Msa0764690:CDS | 30.0% |
| CATATACCTGAGAAAAAAGA+AGG | + | chr5_2:25071148-25071167 | Msa0764690:CDS | 30.0% | |
| AATAGGAAATTTCGAGATTC+AGG | + | chr5_2:25071318-25071337 | Msa0764690:three_prime_UTR | 30.0% | |
| TGCTAATCTGATCAATTCTT+AGG | + | chr5_2:25071417-25071436 | Msa0764690:three_prime_UTR | 30.0% | |
| !! | GAGAATGGTTTGGAGTATTT+TGG | + | chr5_2:25067389-25067408 | Msa0764690:five_prime_UTR | 35.0% |
| ! | GAAGATTCTGAAAATCGACA+TGG | + | chr5_2:25067676-25067695 | Msa0764690:CDS | 35.0% |
| AAAGTAAGGTTACTTCCTGA+AGG | - | chr5_2:25067739-25067758 | None:intergenic | 35.0% | |
| ! | AAGGAGCACAATCAAAAGTA+AGG | - | chr5_2:25067753-25067772 | None:intergenic | 35.0% |
| ATAAATCGGGAAATTCAACC+TGG | - | chr5_2:25067914-25067933 | None:intergenic | 35.0% | |
| TTCCCGATTTATTCACCTTA+AGG | + | chr5_2:25067922-25067941 | Msa0764690:intron | 35.0% | |
| TGGCTAGAAATTCAACCTTA+AGG | - | chr5_2:25067940-25067959 | None:intergenic | 35.0% | |
| GACTTGACCAGAAAAAAAGA+AGG | + | chr5_2:25067966-25067985 | Msa0764690:intron | 35.0% | |
| CTTGACCAGAAAAAAAGAAG+GGG | + | chr5_2:25067968-25067987 | Msa0764690:intron | 35.0% | |
| !!! | TCAAACCCCTTCTTTTTTTC+TGG | - | chr5_2:25067976-25067995 | None:intergenic | 35.0% |
| !! | GAATTTGGCACTGACAATTA+AGG | + | chr5_2:25067994-25068013 | Msa0764690:intron | 35.0% |
| CAGAGAATTATGGCCAATAA+AGG | + | chr5_2:25068079-25068098 | Msa0764690:intron | 35.0% | |
| AAAGACTGAAACGCTTACAA+AGG | - | chr5_2:25068191-25068210 | None:intergenic | 35.0% | |
| CTACATAGACCACAACATAA+CGG | - | chr5_2:25068340-25068359 | None:intergenic | 35.0% | |
| ACTACTTTAACATACCCTTG+TGG | + | chr5_2:25068701-25068720 | Msa0764690:intron | 35.0% | |
| CTACTTTAACATACCCTTGT+GGG | + | chr5_2:25068702-25068721 | Msa0764690:intron | 35.0% | |
| ! | TTTTGTGAGTCTTACACAAG+CGG | + | chr5_2:25068776-25068795 | Msa0764690:intron | 35.0% |
| !! | TGTGATGTCAAAGTGTTGAA+TGG | + | chr5_2:25068908-25068927 | Msa0764690:intron | 35.0% |
| !! | GTGATGTCAAAGTGTTGAAT+GGG | + | chr5_2:25068909-25068928 | Msa0764690:intron | 35.0% |
| !! | TGATGTCAAAGTGTTGAATG+GGG | + | chr5_2:25068910-25068929 | Msa0764690:intron | 35.0% |
| ! | ATTTGAAGTGAACATCGAAC+TGG | + | chr5_2:25069046-25069065 | Msa0764690:intron | 35.0% |
| CTATTTAAGCGGTTTGATTG+TGG | - | chr5_2:25069125-25069144 | None:intergenic | 35.0% | |
| AAAGAGGCCTATGAATAACA+AGG | - | chr5_2:25069310-25069329 | None:intergenic | 35.0% | |
| !!! | TAACTACAAGCTTTTTTGGG+TGG | + | chr5_2:25069340-25069359 | Msa0764690:intron | 35.0% |
| !!! | CTTTTTTGGGTGGAGTTATA+GGG | + | chr5_2:25069350-25069369 | Msa0764690:intron | 35.0% |
| CTGTGACTTATTATCTGAAG+CGG | - | chr5_2:25069591-25069610 | None:intergenic | 35.0% | |
| !! | CATTGATTAGCTTCTGAACT+TGG | + | chr5_2:25069718-25069737 | Msa0764690:intron | 35.0% |
| AGCTTCTGAACTTGGTTTAA+TGG | + | chr5_2:25069726-25069745 | Msa0764690:intron | 35.0% | |
| AACTAATGTGTCCAACTTAG+AGG | + | chr5_2:25069796-25069815 | Msa0764690:intron | 35.0% | |
| CTCAAGGAAGAATGTGTAAT+TGG | + | chr5_2:25069865-25069884 | Msa0764690:intron | 35.0% | |
| ATTAGCAATCTGTCAATAGG+GGG | + | chr5_2:25069966-25069985 | Msa0764690:intron | 35.0% | |
| GGTAAAGTTAGAAGAAGCAA+AGG | + | chr5_2:25069998-25070017 | Msa0764690:intron | 35.0% | |
| ATGCAGATAAATGCAGCTTA+TGG | - | chr5_2:25070042-25070061 | None:intergenic | 35.0% | |
| !! | AAGAATTACCTTGGTGCTTA+AGG | - | chr5_2:25070093-25070112 | None:intergenic | 35.0% |
| ATAAGAGTTCGTACACCATA+TGG | - | chr5_2:25070228-25070247 | None:intergenic | 35.0% | |
| AAGTGTTTATAAGTGGTGTG+CGG | - | chr5_2:25070364-25070383 | None:intergenic | 35.0% | |
| AGGCCATATATCATCCAATA+CGG | + | chr5_2:25070388-25070407 | Msa0764690:intron | 35.0% | |
| ATCCCGTATTGGATGATATA+TGG | - | chr5_2:25070394-25070413 | None:intergenic | 35.0% | |
| ! | TAATATCCATCCCGTTTTAG+TGG | + | chr5_2:25070489-25070508 | Msa0764690:intron | 35.0% |
| ! | TGTTTTTCTTAAATTCCCGG+TGG | - | chr5_2:25070656-25070675 | None:intergenic | 35.0% |
| TACATTGATATGAGTACGTG+CGG | - | chr5_2:25070700-25070719 | None:intergenic | 35.0% | |
| AACCTCATTTAACGACAAAC+GGG | - | chr5_2:25071051-25071070 | None:intergenic | 35.0% | |
| TTATGTGGAATACGTTGTAC+AGG | + | chr5_2:25071088-25071107 | Msa0764690:intron | 35.0% | |
| TATGTGGAATACGTTGTACA+GGG | + | chr5_2:25071089-25071108 | Msa0764690:intron | 35.0% | |
| ATACCTGAGAAAAAAGAAGG+CGG | + | chr5_2:25071151-25071170 | Msa0764690:CDS | 35.0% | |
| TTGATCAGATTAGCAGCAAT+GGG | - | chr5_2:25071412-25071431 | None:intergenic | 35.0% | |
| ATTGATCAGATTAGCAGCAA+TGG | - | chr5_2:25071413-25071432 | None:intergenic | 35.0% | |
| !! | GGTTTGGAGTATTTTGGAGA+AGG | + | chr5_2:25067395-25067414 | Msa0764690:five_prime_UTR | 40.0% |
| ATGGCGAAGAAGAACAGAAA+TGG | - | chr5_2:25067486-25067505 | None:intergenic | 40.0% | |
| CAACCTTCAATACTCGCTTT+AGG | + | chr5_2:25067519-25067538 | Msa0764690:CDS | 40.0% | |
| !! | TGACCTAAAGCGAGTATTGA+AGG | - | chr5_2:25067525-25067544 | None:intergenic | 40.0% |
| AGAGAGAGAAAGAGAGAGAT+TGG | - | chr5_2:25067561-25067580 | None:intergenic | 40.0% | |
| TCTGAAAATCGACATGGGTT+TGG | + | chr5_2:25067682-25067701 | Msa0764690:CDS | 40.0% | |
| !! | ACTTTTGATTGTGCTCCTTC+TGG | + | chr5_2:25067754-25067773 | Msa0764690:CDS | 40.0% |
| ! | ACCTTTTCAGAGTAGATGCA+GGG | - | chr5_2:25067790-25067809 | None:intergenic | 40.0% |
| ! | AACCTTTTCAGAGTAGATGC+AGG | - | chr5_2:25067791-25067810 | None:intergenic | 40.0% |
| !! | AGGTTGAATTTCTAGCCACT+AGG | + | chr5_2:25067942-25067961 | Msa0764690:intron | 40.0% |
| !!! | AAGGTTTTGAATAGTGGTCG+CGG | + | chr5_2:25068013-25068032 | Msa0764690:intron | 40.0% |
| GAATTATGGCCAATAAAGGC+TGG | + | chr5_2:25068083-25068102 | Msa0764690:intron | 40.0% | |
| AATGTGAGGACTTCTTTGGT+GGG | + | chr5_2:25068152-25068171 | Msa0764690:intron | 40.0% | |
| ! | TTCTTTGGTGGGTGATTTGT+AGG | + | chr5_2:25068163-25068182 | Msa0764690:intron | 40.0% |
| AACCACAACAAGACTACGAT+CGG | - | chr5_2:25068301-25068320 | None:intergenic | 40.0% | |
| ! | GCACCGACATTTCTTATCAA+AGG | + | chr5_2:25068359-25068378 | Msa0764690:intron | 40.0% |
| TCATAGGTTGTGGTTCAGAT+TGG | + | chr5_2:25068496-25068515 | Msa0764690:intron | 40.0% | |
| CATAGGTTGTGGTTCAGATT+GGG | + | chr5_2:25068497-25068516 | Msa0764690:intron | 40.0% | |
| !! | AATTAGCTAATGGGCGTTGA+AGG | + | chr5_2:25068600-25068619 | Msa0764690:intron | 40.0% |
| !! | ACAAAGGTGCCGTATATATG+CGG | - | chr5_2:25068732-25068751 | None:intergenic | 40.0% |
| CCAAAGAGGATAGGTTACAA+AGG | - | chr5_2:25068748-25068767 | None:intergenic | 40.0% | |
| CCTTTGTAACCTATCCTCTT+TGG | + | chr5_2:25068745-25068764 | Msa0764690:intron | 40.0% | |
| ACAAAAACAAAGGGCCAAAG+AGG | - | chr5_2:25068762-25068781 | None:intergenic | 40.0% | |
| TTTGTGAGTCTTACACAAGC+GGG | + | chr5_2:25068777-25068796 | Msa0764690:intron | 40.0% | |
| !! | TCAAAGTGTTGAATGGGGAA+TGG | + | chr5_2:25068915-25068934 | Msa0764690:intron | 40.0% |
| !! | CAAAGTGTTGAATGGGGAAT+GGG | + | chr5_2:25068916-25068935 | Msa0764690:intron | 40.0% |
| !! | AAAGTGTTGAATGGGGAATG+GGG | + | chr5_2:25068917-25068936 | Msa0764690:intron | 40.0% |
| ACATCGAACTGGTGAAATCT+TGG | + | chr5_2:25069057-25069076 | Msa0764690:intron | 40.0% | |
| CATCGAACTGGTGAAATCTT+GGG | + | chr5_2:25069058-25069077 | Msa0764690:intron | 40.0% | |
| !!! | GCTTTTTTGGGTGGAGTTAT+AGG | + | chr5_2:25069349-25069368 | Msa0764690:intron | 40.0% |
| AAATATCGCTGTAGTGAGAC+AGG | + | chr5_2:25069380-25069399 | Msa0764690:CDS | 40.0% | |
| AATATCGCTGTAGTGAGACA+GGG | + | chr5_2:25069381-25069400 | Msa0764690:CDS | 40.0% | |
| ! | AAAGTAGACCGAGTTTTCTG+AGG | - | chr5_2:25069470-25069489 | None:intergenic | 40.0% |
| TCAGAAAACTCGGTCTACTT+TGG | + | chr5_2:25069469-25069488 | Msa0764690:CDS | 40.0% | |
| ACAGTCACAGAGAACATTAC+TGG | + | chr5_2:25069556-25069575 | Msa0764690:CDS | 40.0% | |
| CGCTTCAGATAATAAGTCAC+AGG | + | chr5_2:25069589-25069608 | Msa0764690:CDS | 40.0% | |
| AACTTCTCTTCAGTATCTGC+AGG | - | chr5_2:25069641-25069660 | None:intergenic | 40.0% | |
| CACAGCTTAATCCTCTAAGT+TGG | - | chr5_2:25069810-25069829 | None:intergenic | 40.0% | |
| ! | GTCTGCTGCTATTTAGTGTT+TGG | + | chr5_2:25069832-25069851 | Msa0764690:intron | 40.0% |
| ! | GCTTTTCGCAAGAATTACCT+TGG | - | chr5_2:25070102-25070121 | None:intergenic | 40.0% |
| ! | CTTTTCGAAACCAGCTTAGA+AGG | + | chr5_2:25070332-25070351 | Msa0764690:intron | 40.0% |
| GGCCATATATCATCCAATAC+GGG | + | chr5_2:25070389-25070408 | Msa0764690:intron | 40.0% | |
| TTGGATGAGAAATCCCGTAT+TGG | - | chr5_2:25070405-25070424 | None:intergenic | 40.0% | |
| GGGTGCAATATTTATTGTCC+TGG | + | chr5_2:25070544-25070563 | Msa0764690:intron | 40.0% | |
| GAAAGTTAGATCATGGAACC+AGG | - | chr5_2:25070565-25070584 | None:intergenic | 40.0% | |
| ! | TTAGGACTACTAGTTCTCAC+AGG | + | chr5_2:25070619-25070638 | Msa0764690:intron | 40.0% |
| ! | TAGGACTACTAGTTCTCACA+GGG | + | chr5_2:25070620-25070639 | Msa0764690:intron | 40.0% |
| AATGTACCTGTAGTGCTTGA+GGG | + | chr5_2:25070714-25070733 | Msa0764690:intron | 40.0% | |
| !! | CTCTGTCAACTTGTTACTAG+AGG | + | chr5_2:25070851-25070870 | Msa0764690:intron | 40.0% |
| TCACACGCTCTCAAATTTCA+AGG | - | chr5_2:25070935-25070954 | None:intergenic | 40.0% | |
| TACCCGTTTGTCGTTAAATG+AGG | + | chr5_2:25071046-25071065 | Msa0764690:intron | 40.0% | |
| AATAAATCGCATCGTACAGC+AGG | - | chr5_2:25071241-25071260 | None:intergenic | 40.0% | |
| !! | AGCAGCAATGGGTTGAATTA+TGG | - | chr5_2:25071401-25071420 | None:intergenic | 40.0% |
| ! | TCCCTGCATCTACTCTGAAA+AGG | + | chr5_2:25067786-25067805 | Msa0764690:CDS | 45.0% |
| TGAATAGTGGTCGCGGTTTA+AGG | + | chr5_2:25068020-25068039 | Msa0764690:intron | 45.0% | |
| CCAACTAAGCCAGCCTTTAT+TGG | - | chr5_2:25068095-25068114 | None:intergenic | 45.0% | |
| !! | CCAATAAAGGCTGGCTTAGT+TGG | + | chr5_2:25068092-25068111 | Msa0764690:intron | 45.0% |
| TGCCAATGTGAGGACTTCTT+TGG | + | chr5_2:25068148-25068167 | Msa0764690:intron | 45.0% | |
| CACCAAAGAAGTCCTCACAT+TGG | - | chr5_2:25068153-25068172 | None:intergenic | 45.0% | |
| CAATGTGAGGACTTCTTTGG+TGG | + | chr5_2:25068151-25068170 | Msa0764690:intron | 45.0% | |
| TTAGGTAAGTTAGGCTCCGA+GGG | - | chr5_2:25068226-25068245 | None:intergenic | 45.0% | |
| TTTAGGTAAGTTAGGCTCCG+AGG | - | chr5_2:25068227-25068246 | None:intergenic | 45.0% | |
| GTGTCATGTCCTTGCTTCAT+AGG | + | chr5_2:25068480-25068499 | Msa0764690:intron | 45.0% | |
| TGTCCTTGCTTCATAGGTTG+TGG | + | chr5_2:25068486-25068505 | Msa0764690:intron | 45.0% | |
| GAACCACAACCTATGAAGCA+AGG | - | chr5_2:25068492-25068511 | None:intergenic | 45.0% | |
| TTGTGGTTCAGATTGGGTCA+TGG | + | chr5_2:25068503-25068522 | Msa0764690:intron | 45.0% | |
| TATATGCGGAACACCCACAA+GGG | - | chr5_2:25068718-25068737 | None:intergenic | 45.0% | |
| ATATATGCGGAACACCCACA+AGG | - | chr5_2:25068719-25068738 | None:intergenic | 45.0% | |
| GTGGGTGTTCCGCATATATA+CGG | + | chr5_2:25068720-25068739 | Msa0764690:intron | 45.0% | |
| AACAAAGGGCCAAAGAGGAT+AGG | - | chr5_2:25068757-25068776 | None:intergenic | 45.0% | |
| TTGTGAGTCTTACACAAGCG+GGG | + | chr5_2:25068778-25068797 | Msa0764690:intron | 45.0% | |
| CTGGTGAAATCTTGGGATCA+TGG | + | chr5_2:25069065-25069084 | Msa0764690:intron | 45.0% | |
| CCATGGAACGGAACTGAATA+TGG | - | chr5_2:25069153-25069172 | None:intergenic | 45.0% | |
| CCATATTCAGTTCCGTTCCA+TGG | + | chr5_2:25069150-25069169 | Msa0764690:intron | 45.0% | |
| GAAGAGAAGTTGTCAGTGCT+TGG | + | chr5_2:25069650-25069669 | Msa0764690:CDS | 45.0% | |
| !!! | GTTGTCAGTGCTTGGTTTTG+AGG | + | chr5_2:25069658-25069677 | Msa0764690:CDS | 45.0% |
| TTCCATAAGCTCGACTACTG+TGG | - | chr5_2:25069934-25069953 | None:intergenic | 45.0% | |
| !! | AGAAGTATGGTGCCACCATA+TGG | + | chr5_2:25070210-25070229 | Msa0764690:intron | 45.0% |
| AGAGTTCGTACACCATATGG+TGG | - | chr5_2:25070225-25070244 | None:intergenic | 45.0% | |
| ! | AGACCACGTCTTGAGAGTAT+AGG | + | chr5_2:25070261-25070280 | Msa0764690:intron | 45.0% |
| ! | GACCACGTCTTGAGAGTATA+GGG | + | chr5_2:25070262-25070281 | Msa0764690:intron | 45.0% |
| AGGAAGGGTAGCCACTAAAA+CGG | - | chr5_2:25070503-25070522 | None:intergenic | 45.0% | |
| ! | AGGACTACTAGTTCTCACAG+GGG | + | chr5_2:25070621-25070640 | Msa0764690:intron | 45.0% |
| CAATGTACCTGTAGTGCTTG+AGG | + | chr5_2:25070713-25070732 | Msa0764690:intron | 45.0% | |
| TGCTGCAACATAACCAGACA+TGG | - | chr5_2:25071180-25071199 | None:intergenic | 45.0% | |
| ATGTCTGGTTATGTTGCAGC+AGG | + | chr5_2:25071179-25071198 | Msa0764690:CDS | 45.0% | |
| TGGTTATGTTGCAGCAGGAA+GGG | + | chr5_2:25071184-25071203 | Msa0764690:CDS | 45.0% | |
| !!! | AAAAAAAAATTATTGATTTT+AGG | + | chr5_2:25068824-25068843 | Msa0764690:intron | 5.0% |
| GAGTAGATGCAGGGAACACA+AGG | - | chr5_2:25067781-25067800 | None:intergenic | 50.0% | |
| TCCTGTGAGCATAGCACAGT+TGG | + | chr5_2:25067882-25067901 | Msa0764690:intron | 50.0% | |
| ! | TTTCTGGTCAAGTCGCCTAG+TGG | - | chr5_2:25067960-25067979 | None:intergenic | 50.0% |
| GGAGTTGACACACCCACAAT+CGG | + | chr5_2:25068113-25068132 | Msa0764690:intron | 50.0% | |
| AGAAGTCCTCACATTGGCAG+CGG | - | chr5_2:25068147-25068166 | None:intergenic | 50.0% | |
| !! | AGCCGATCGTAGTCTTGTTG+TGG | + | chr5_2:25068296-25068315 | Msa0764690:intron | 50.0% |
| CAACCTGTCGAACCATGGAA+CGG | - | chr5_2:25069165-25069184 | None:intergenic | 50.0% | |
| CAGTTCAACCTGTCGAACCA+TGG | - | chr5_2:25069170-25069189 | None:intergenic | 50.0% | |
| ! | GTTCGACAGGTTGAACTGTC+TGG | + | chr5_2:25069172-25069191 | Msa0764690:intron | 50.0% |
| GACCACAGTAGTCGAGCTTA+TGG | + | chr5_2:25069929-25069948 | Msa0764690:intron | 50.0% | |
| GTCAATAGGGGGATGTCTGT+TGG | + | chr5_2:25069977-25069996 | Msa0764690:intron | 50.0% | |
| GTCATGAGCCTTAAGCACCA+AGG | + | chr5_2:25070082-25070101 | Msa0764690:intron | 50.0% | |
| GTCCCTATACTCTCAAGACG+TGG | - | chr5_2:25070267-25070286 | None:intergenic | 50.0% | |
| GGAAGGGTAGCCACTAAAAC+GGG | - | chr5_2:25070502-25070521 | None:intergenic | 50.0% | |
| TTACGACCCTGAAGGAGGAA+GGG | - | chr5_2:25070518-25070537 | None:intergenic | 50.0% | |
| TTTACGACCCTGAAGGAGGA+AGG | - | chr5_2:25070519-25070538 | None:intergenic | 50.0% | |
| TGTCTTTACGACCCTGAAGG+AGG | - | chr5_2:25070523-25070542 | None:intergenic | 50.0% | |
| CCTTCAGGGTCGTAAAGACA+CGG | + | chr5_2:25070523-25070542 | Msa0764690:intron | 50.0% | |
| CTTCAGGGTCGTAAAGACAC+GGG | + | chr5_2:25070524-25070543 | Msa0764690:intron | 50.0% | |
| ! | ACAGGGGCTTTAATCTCCAC+CGG | + | chr5_2:25070637-25070656 | Msa0764690:intron | 50.0% |
| !!! | CAGCCGCCTTCTTTTTTCTC+AGG | - | chr5_2:25071157-25071176 | None:intergenic | 50.0% |
| CTGGTTATGTTGCAGCAGGA+AGG | + | chr5_2:25071183-25071202 | Msa0764690:CDS | 50.0% | |
| GGTTATGTTGCAGCAGGAAG+GGG | + | chr5_2:25071185-25071204 | Msa0764690:CDS | 50.0% | |
| GAAGGGGTCAGACAAACTCT+CGG | + | chr5_2:25071201-25071220 | Msa0764690:CDS | 50.0% | |
| CAGGGAACACAAGGACCAGA+AGG | - | chr5_2:25067772-25067791 | None:intergenic | 55.0% | |
| GCCAACTGTGCTATGCTCAC+AGG | - | chr5_2:25067886-25067905 | None:intergenic | 55.0% | |
| TAGCACAGTTGGCAACGACC+AGG | + | chr5_2:25067893-25067912 | Msa0764690:intron | 55.0% | |
| GCGGGAGTTAGACCGATTGT+GGG | - | chr5_2:25068128-25068147 | None:intergenic | 55.0% | |
| AGCGGGAGTTAGACCGATTG+TGG | - | chr5_2:25068129-25068148 | None:intergenic | 55.0% | |
| TAACTCCCGCTGCCAATGTG+AGG | + | chr5_2:25068138-25068157 | Msa0764690:intron | 55.0% | |
| GAAGTCCTCACATTGGCAGC+GGG | - | chr5_2:25068146-25068165 | None:intergenic | 55.0% | |
| CTTTGAGCCCAGTGAACCCT+CGG | + | chr5_2:25068207-25068226 | Msa0764690:intron | 55.0% | |
| TTAGGCTCCGAGGGTTCACT+GGG | - | chr5_2:25068217-25068236 | None:intergenic | 55.0% | |
| GTTCCGTTCCATGGTTCGAC+AGG | + | chr5_2:25069159-25069178 | Msa0764690:intron | 55.0% | |
| GGGTAGCCACTAAAACGGGA+TGG | - | chr5_2:25070498-25070517 | None:intergenic | 55.0% | |
| TGGCTACCCTTCCTCCTTCA+GGG | + | chr5_2:25070509-25070528 | Msa0764690:intron | 55.0% | |
| CCGTGTCTTTACGACCCTGA+AGG | - | chr5_2:25070526-25070545 | None:intergenic | 55.0% | |
| ! | CAGGGGCTTTAATCTCCACC+GGG | + | chr5_2:25070638-25070657 | Msa0764690:intron | 55.0% |
| AGCGAACCCTCAAGCACTAC+AGG | - | chr5_2:25070723-25070742 | None:intergenic | 55.0% | |
| GTTAGGCTCCGAGGGTTCAC+TGG | - | chr5_2:25068218-25068237 | None:intergenic | 60.0% | |
| GCGGTCGTCACCTTCTAAGC+TGG | - | chr5_2:25070345-25070364 | None:intergenic | 60.0% | |
| GTGGCTACCCTTCCTCCTTC+AGG | + | chr5_2:25070508-25070527 | Msa0764690:intron | 60.0% | |
| AAGAAGGCGGCTGCCATGTC+TGG | + | chr5_2:25071164-25071183 | Msa0764690:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 25067340 | 25071489 | 25067340 | ID=Msa0764690;Name=Msa0764690 |
| chr5_2 | mRNA | 25067340 | 25071489 | 25067340 | ID=Msa0764690-mRNA-1;Parent=Msa0764690;Name=Msa0764690-mRNA-1;_AED=0.02;_eAED=0.02;_QI=113|1|1|1|1|1|4|260|219 |
| chr5_2 | exon | 25067340 | 25067550 | 25067340 | ID=Msa0764690-mRNA-1:exon:10096;Parent=Msa0764690-mRNA-1 |
| chr5_2 | exon | 25067675 | 25067807 | 25067675 | ID=Msa0764690-mRNA-1:exon:10097;Parent=Msa0764690-mRNA-1 |
| chr5_2 | exon | 25069371 | 25069679 | 25069371 | ID=Msa0764690-mRNA-1:exon:10098;Parent=Msa0764690-mRNA-1 |
| chr5_2 | exon | 25071110 | 25071489 | 25071110 | ID=Msa0764690-mRNA-1:exon:10099;Parent=Msa0764690-mRNA-1 |
| chr5_2 | five_prime_UTR | 25067340 | 25067452 | 25067340 | ID=Msa0764690-mRNA-1:five_prime_utr;Parent=Msa0764690-mRNA-1 |
| chr5_2 | CDS | 25067453 | 25067550 | 25067453 | ID=Msa0764690-mRNA-1:cds;Parent=Msa0764690-mRNA-1 |
| chr5_2 | CDS | 25067675 | 25067807 | 25067675 | ID=Msa0764690-mRNA-1:cds;Parent=Msa0764690-mRNA-1 |
| chr5_2 | CDS | 25069371 | 25069679 | 25069371 | ID=Msa0764690-mRNA-1:cds;Parent=Msa0764690-mRNA-1 |
| chr5_2 | CDS | 25071110 | 25071229 | 25071110 | ID=Msa0764690-mRNA-1:cds;Parent=Msa0764690-mRNA-1 |
| chr5_2 | three_prime_UTR | 25071230 | 25071489 | 25071230 | ID=Msa0764690-mRNA-1:three_prime_utr;Parent=Msa0764690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
