AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1206400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206400 MtrunA17_Chr4g0055491 96.309 298 11 0 13 310 1 298 0.0 588
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206400 AT4G17050.1 68.792 298 93 0 13 310 1 298 4.57e-156 438

Find 102 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGAATGTTCAAAATT+TGG 0.124447 8_1:+63425396 None:intergenic
TAGAGTGGAGTCATAAATTT+TGG 0.203494 8_1:+63430230 None:intergenic
TTCCTCCTTCTCCTCGTTTC+CGG 0.204164 8_1:-63430433 Msa1206400:intron
GGGCCATAAACATGACTTTC+TGG 0.237286 8_1:+63427717 None:intergenic
TCACCAGAAAGTCATGTTTA+TGG 0.245916 8_1:-63427720 Msa1206400:CDS
ATAAAGTGTGAGCCCATTTC+AGG 0.251326 8_1:+63427570 None:intergenic
AATCAAAATCACAATTATAA+TGG 0.260090 8_1:+63422565 None:intergenic
CCAGCATGGTTTGTTGCTAT+TGG 0.298210 8_1:-63424148 Msa1206400:CDS
AACTTATCACCTTCAGTATA+TGG 0.299139 8_1:+63426570 None:intergenic
CAAAACGATTGCTATTGTTT+TGG 0.309597 8_1:-63430551 Msa1206400:five_prime_UTR
ACAAACCATGCTGGTTATAA+TGG 0.317445 8_1:+63424157 None:intergenic
TTCAGGCGGGTGATGTCATT+TGG 0.330112 8_1:-63422827 Msa1206400:CDS
AAAGCTACTTCCAATGTCTT+TGG 0.332406 8_1:-63424455 Msa1206400:CDS
AGGAGAAGGCATTTATCGTT+TGG 0.348546 8_1:-63424124 Msa1206400:CDS
TGTGAATAGGTACCCGGTTC+AGG 0.358704 8_1:-63422844 Msa1206400:intron
ATGACATCACCCGCCTGAAC+CGG 0.360131 8_1:+63422831 None:intergenic
AGGGGCTCTGGGACATGATT+TGG 0.367925 8_1:+63425061 None:intergenic
ATCAAAATCACAATTATAAT+GGG 0.370700 8_1:+63422566 None:intergenic
TGGAGAGTTTCTTAATGTTA+AGG 0.373459 8_1:-63424275 Msa1206400:intron
TATATTTATTAGCTCTCATA+TGG 0.380308 8_1:-63422462 Msa1206400:three_prime_UTR
CCCTTACTTTGGAGATTAAG+AGG 0.387626 8_1:+63430204 None:intergenic
AGGGTTGTTTAGGTATTCAT+TGG 0.390429 8_1:-63430322 Msa1206400:CDS
GGAGAAGGCATTTATCGTTT+GGG 0.390850 8_1:-63424123 Msa1206400:CDS
GTCTTCAGGTACGCTGCACT+GGG 0.401122 8_1:-63422634 Msa1206400:intron
TTTGCAGAAAATTCAAGATC+AGG 0.405975 8_1:-63426814 Msa1206400:intron
TTTATGGCCCATTGCCTGAT+TGG 0.406017 8_1:-63427704 Msa1206400:intron
GTCGAATTAACTAGGGGCTC+TGG 0.407908 8_1:+63425049 None:intergenic
CAAAACAATAGCAATCGTTT+TGG 0.409038 8_1:+63430552 None:intergenic
GAGATTAAGAGGAGGTAGAG+TGG 0.413997 8_1:+63430215 None:intergenic
TTATTAGCTCTCATATGGTT+AGG 0.420667 8_1:-63422457 Msa1206400:three_prime_UTR
GTTTATCCGTCGAATTAACT+AGG 0.436467 8_1:+63425041 None:intergenic
ATGCCTTGGCAAAATACTAT+AGG 0.444535 8_1:+63430528 None:intergenic
TATTCATTGGCGCAAGAAGA+AGG 0.459022 8_1:-63430309 Msa1206400:CDS
ATGCATTGAATCTCATCATA+TGG 0.464620 8_1:-63422415 Msa1206400:three_prime_UTR
AAGGTTCAATTCGCATGCCT+TGG 0.473071 8_1:+63430514 None:intergenic
AATCAAAGGTTCAAAGCTAA+AGG 0.474487 8_1:+63422099 None:intergenic
GTATTTGTACAATACTGAAA+TGG 0.475602 8_1:+63422132 None:intergenic
TCGAATTAACTAGGGGCTCT+GGG 0.484257 8_1:+63425050 None:intergenic
CATGGTTTGTTGCTATTGGA+AGG 0.492316 8_1:-63424144 Msa1206400:CDS
TAGACACTGCGTGTGAATCC+AGG 0.492364 8_1:+63427765 None:intergenic
TAGGAATAATGTACCTCCCC+TGG 0.496765 8_1:+63425001 None:intergenic
TTTGGCAGGATCAATACATC+GGG 0.498459 8_1:-63427609 Msa1206400:intron
TTAATTATTAAATAAGGTGG+TGG 0.498475 8_1:+63422511 None:intergenic
AAAACCTCTCTACATCATGC+AGG 0.502363 8_1:+63426785 None:intergenic
TTGACGTAGCTTACCATTGT+GGG 0.503289 8_1:+63422790 None:intergenic
AGAGTTACCAATCAGGCAAT+GGG 0.505467 8_1:+63427697 None:intergenic
TCAAACCTTTCAGCTTTGCT+AGG 0.509684 8_1:+63427541 None:intergenic
TTTATCGTTTGGGTGATAGT+TGG 0.509948 8_1:-63424113 Msa1206400:intron
GGCGGGTGATGTCATTTGGA+TGG 0.513354 8_1:-63422823 Msa1206400:CDS
ATTGAATGTTCAAAATTTGG+AGG 0.514704 8_1:+63425399 None:intergenic
CAGCCACTCGTTGAAACTCC+AGG 0.517778 8_1:-63425019 Msa1206400:CDS
TTTATCCGTCGAATTAACTA+GGG 0.520493 8_1:+63425042 None:intergenic
AGCTTGGTGTTGAAAATCAA+AGG 0.532358 8_1:+63422085 None:intergenic
TCAAATACCACAATAATAGC+AGG 0.532548 8_1:+63425363 None:intergenic
GTCAGAGTCACCAGTGCTCA+TGG 0.534419 8_1:-63426599 Msa1206400:CDS
TAGTACCGGAAACGAGGAGA+AGG 0.536548 8_1:+63430428 None:intergenic
AATTCTTCGCTGAGCACAGA+AGG 0.539539 8_1:+63430273 None:intergenic
CAAAGCTAAAGGCAATTCAA+TGG 0.547610 8_1:+63422110 None:intergenic
TGACATCACCCGCCTGAACC+GGG 0.548155 8_1:+63422832 None:intergenic
AAGAGTTACCAATCAGGCAA+TGG 0.552009 8_1:+63427696 None:intergenic
AGATTCATCTTTGTGCTCCA+CGG 0.553805 8_1:-63426626 Msa1206400:CDS
ATATTCAAGAGTTACCAATC+AGG 0.554162 8_1:+63427690 None:intergenic
ATTCATTGGCGCAAGAAGAA+GGG 0.563652 8_1:-63430308 Msa1206400:CDS
ATGGCTCACACCATGAGCAC+TGG 0.568857 8_1:+63426589 None:intergenic
AAGTCATATGCCAAAGACAT+TGG 0.570777 8_1:+63424445 None:intergenic
TACCGGAAACGAGGAGAAGG+AGG 0.570909 8_1:+63430431 None:intergenic
AATAGGTACCCGGTTCAGGC+GGG 0.576983 8_1:-63422840 Msa1206400:intron
GCTTACCATTGTGGGACGAA+TGG 0.580025 8_1:+63422798 None:intergenic
AAACCTCTCTACATCATGCA+GGG 0.584130 8_1:+63426786 None:intergenic
AAGAGATAGTACCGGAAACG+AGG 0.584199 8_1:+63430422 None:intergenic
CCAATAGCAACAAACCATGC+TGG 0.587457 8_1:+63424148 None:intergenic
TCCCCTGGAGTTTCAACGAG+TGG 0.592547 8_1:+63425016 None:intergenic
TTATTGTGGTATTTGAACGA+AGG 0.594533 8_1:-63425356 Msa1206400:intron
GAATAGGTACCCGGTTCAGG+CGG 0.594571 8_1:-63422841 Msa1206400:intron
TTTGACGTAGCTTACCATTG+TGG 0.595739 8_1:+63422789 None:intergenic
TTAACATTAAGAAACTCTCC+AGG 0.597029 8_1:+63424277 None:intergenic
AGCCACTCGTTGAAACTCCA+GGG 0.597354 8_1:-63425018 Msa1206400:CDS
GAGATTCAATGCATTAGTGT+TGG 0.602539 8_1:+63422424 None:intergenic
CTTTGGCAGGATCAATACAT+CGG 0.603198 8_1:-63427610 Msa1206400:intron
TTGTTGCTATTGGAAGGAGA+AGG 0.606426 8_1:-63424138 Msa1206400:CDS
TGACGCTCCTGCTATTATTG+TGG 0.607609 8_1:-63425370 Msa1206400:CDS
TTCCCCTGCATGATGTAGAG+AGG 0.611970 8_1:-63426789 Msa1206400:intron
CACTGGGGAAAACTCCGACA+CGG 0.622193 8_1:-63422618 Msa1206400:CDS
TGTTAGATAAATGTCACGAA+TGG 0.629074 8_1:-63422540 Msa1206400:three_prime_UTR
ATGTACCTAGCAAAGCTGAA+AGG 0.629911 8_1:-63427546 Msa1206400:intron
GAGGTCCATTATAACCAGCA+TGG 0.636159 8_1:-63424162 Msa1206400:CDS
ATGACTCATGAGTCACGGAA+AGG 0.639398 8_1:+63430495 None:intergenic
AGAGCCCCTAGTTAATTCGA+CGG 0.642003 8_1:-63425047 Msa1206400:CDS
TGACGATGACTCATGAGTCA+CGG 0.652633 8_1:+63430490 None:intergenic
TGGCGCCATTCGTCCCACAA+TGG 0.657597 8_1:-63422803 Msa1206400:intron
CAGTGTCCACTCTCAAAATG+CGG 0.668861 8_1:-63430462 Msa1206400:CDS
TGGTGTGAGCCATATACTGA+AGG 0.678734 8_1:-63426579 Msa1206400:intron
ACTCGTTGAAACTCCAGGGG+AGG 0.679003 8_1:-63425014 Msa1206400:intron
AACCTCTCTACATCATGCAG+GGG 0.681979 8_1:+63426787 None:intergenic
TTATCCGTCGAATTAACTAG+GGG 0.689589 8_1:+63425043 None:intergenic
TGGCAGGATCAATACATCGG+GGG 0.695468 8_1:-63427607 Msa1206400:intron
TTACTTTGGAGATTAAGAGG+AGG 0.697440 8_1:+63430207 None:intergenic
GCCACTCGTTGAAACTCCAG+GGG 0.709562 8_1:-63425017 Msa1206400:CDS
TTGTACAGAAGATACCGTGT+CGG 0.721219 8_1:+63422604 None:intergenic
TGGTGACTCTGACAACACCG+TGG 0.731971 8_1:+63426609 None:intergenic
TTGGCAGGATCAATACATCG+GGG 0.751264 8_1:-63427608 Msa1206400:intron
TCTTCAGGTACGCTGCACTG+GGG 0.784250 8_1:-63422633 Msa1206400:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTAATAATTAATAAA+AGG - chr8_1:63429417-63429436 Msa1206400:intron 0.0%
!!! TTTATTTTAATTATTAAATA+AGG + chr8_1:63430177-63430196 None:intergenic 0.0%
!!! TTTTCTAAAACAAAAATATT+TGG - chr8_1:63424843-63424862 Msa1206400:intron 10.0%
!!! AAAAATGTGTTTTATTATTT+AGG - chr8_1:63426976-63426995 Msa1206400:intron 10.0%
!!! AAAATGTGTTTTATTATTTA+GGG - chr8_1:63426977-63426996 Msa1206400:intron 10.0%
!! TTTGTTTATAAATCATAAAA+GGG + chr8_1:63427368-63427387 None:intergenic 10.0%
!! ATTTGTTTATAAATCATAAA+AGG + chr8_1:63427369-63427388 None:intergenic 10.0%
!!! TTTTAAGTTTTTTACTTTAA+AGG - chr8_1:63428458-63428477 Msa1206400:intron 10.0%
!!! ATTTTAATTATTAAATAAGG+TGG + chr8_1:63430174-63430193 None:intergenic 10.0%
!! AAAGAAAAATAACATAAATG+AGG + chr8_1:63422324-63422343 None:intergenic 15.0%
!!! ATTTTCATATATGAATCAAA+TGG - chr8_1:63422525-63422544 Msa1206400:three_prime_UTR 15.0%
!!! TTCAATCAAATTTGTTTAAA+CGG + chr8_1:63423525-63423544 None:intergenic 15.0%
!! AAACATTTACAATTGTAATT+TGG + chr8_1:63423673-63423692 None:intergenic 15.0%
!! TATTTCTTGAGAATAATAAT+AGG - chr8_1:63423725-63423744 Msa1206400:intron 15.0%
!! ACTATATTTATATTGTAGAA+AGG - chr8_1:63423804-63423823 Msa1206400:intron 15.0%
!!! TACTATAAGATTGTTATTTT+TGG - chr8_1:63424655-63424674 Msa1206400:intron 15.0%
!!! TTTGTTTTAGAAAATAAATC+AGG + chr8_1:63424837-63424856 None:intergenic 15.0%
!!! AGTATTAATTAATTAGTTTG+AGG - chr8_1:63426282-63426301 Msa1206400:intron 15.0%
!!! TAATTTTATTGAAAATGCAT+TGG - chr8_1:63427438-63427457 Msa1206400:intron 15.0%
!! TTGTTGAATTTAAACAAAAA+AGG + chr8_1:63427733-63427752 None:intergenic 15.0%
!! ATAATATTAGAAAGATTAGA+CGG + chr8_1:63428316-63428335 None:intergenic 15.0%
!! TAATCTTTCTAATATTATCA+TGG - chr8_1:63428318-63428337 Msa1206400:intron 15.0%
!! AACGTACAAAAAAATTAAAA+AGG + chr8_1:63428484-63428503 None:intergenic 15.0%
!! AAAAGTAATCCAAAATATAT+TGG + chr8_1:63428671-63428690 None:intergenic 15.0%
!!! TATTTTCATATCTATGATTT+TGG - chr8_1:63429000-63429019 Msa1206400:intron 15.0%
!! TCTGTTAAATATTTATCAAT+TGG - chr8_1:63429026-63429045 Msa1206400:intron 15.0%
!! TCTGTTAAATATTTATCAAT+TGG + chr8_1:63429026-63429045 None:intergenic 15.0%
!! AATTGATAAATATTTAACAG+AGG - chr8_1:63429063-63429082 Msa1206400:intron 15.0%
!!! TATTTTCATATCTATGATTT+TGG + chr8_1:63429000-63429019 None:intergenic 15.0%
!!! TTGTACTTGTTATTTATATT+GGG + chr8_1:63429363-63429382 None:intergenic 15.0%
!!! ATTGTACTTGTTATTTATAT+TGG + chr8_1:63429364-63429383 None:intergenic 15.0%
!! ATCAAAATCACAATTATAAT+GGG + chr8_1:63430116-63430135 None:intergenic 15.0%
!! AATCAAAATCACAATTATAA+TGG + chr8_1:63430117-63430136 None:intergenic 15.0%
!! AAGAAAAATGTATAAACAAA+AGG - chr8_1:63430355-63430374 Msa1206400:intron 15.0%
!! AGAAAAATGTATAAACAAAA+GGG - chr8_1:63430356-63430375 Msa1206400:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr8_1:63430419-63430438 Msa1206400:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr8_1:63430420-63430439 Msa1206400:intron 15.0%
!!! GACATTTTTTTTTAGAAAAT+GGG - chr8_1:63430489-63430508 Msa1206400:exon 15.0%
!!! TCATAAATTTTGGAATAAAG+AGG + chr8_1:63422442-63422461 None:intergenic 20.0%
!! ATATATGAAAATAACACAGT+CGG + chr8_1:63422517-63422536 None:intergenic 20.0%
!!! GTTGATTTATTCAACAATTT+GGG - chr8_1:63422956-63422975 Msa1206400:intron 20.0%
!! AAAAACATATATCCTACAAA+AGG - chr8_1:63423431-63423450 Msa1206400:intron 20.0%
!!! AACTACATCAAAATATCTTT+TGG - chr8_1:63424783-63424802 Msa1206400:intron 20.0%
!!! AAAATATCTTTTGGATCTTA+TGG - chr8_1:63424792-63424811 Msa1206400:intron 20.0%
!!! ATTTTTAATTTCACCTGAAA+TGG - chr8_1:63425096-63425115 Msa1206400:intron 20.0%
!!! TTTTTAATTTCACCTGAAAT+GGG - chr8_1:63425097-63425116 Msa1206400:intron 20.0%
!! TAGTATTTAGCAAATATACA+AGG + chr8_1:63425238-63425257 None:intergenic 20.0%
!! TAAATATTATGCATCATGTA+TGG + chr8_1:63425295-63425314 None:intergenic 20.0%
!! GAAGAAAAATATGTTGTAAA+TGG - chr8_1:63425418-63425437 Msa1206400:CDS 20.0%
!! TGTTTATAAACTTATACTTG+TGG - chr8_1:63426250-63426269 Msa1206400:intron 20.0%
!! TCTAATCTAATCTAATCTAA+TGG - chr8_1:63426808-63426827 Msa1206400:CDS 20.0%
!! TCAATTGAATGTTCAAAATT+TGG + chr8_1:63427286-63427305 None:intergenic 20.0%
!! GATAGTTAATCGAAAAATTA+AGG - chr8_1:63427775-63427794 Msa1206400:intron 20.0%
!! TTCTAATATTATCATGGTTT+CGG - chr8_1:63428324-63428343 Msa1206400:intron 20.0%
!!! TTTAATTTTTTTGTACGTTG+TGG - chr8_1:63428485-63428504 Msa1206400:intron 20.0%
!!! TATATAATAACTTGAGCTTT+TGG - chr8_1:63429524-63429543 Msa1206400:intron 20.0%
!!! ATATAATAACTTGAGCTTTT+GGG - chr8_1:63429525-63429544 Msa1206400:intron 20.0%
!! TTAATTATTAAATAAGGTGG+TGG + chr8_1:63430171-63430190 None:intergenic 20.0%
!!! TATATTTATTAGCTCTCATA+TGG - chr8_1:63430217-63430236 Msa1206400:CDS 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr8_1:63430379-63430398 Msa1206400:intron 20.0%
!!! GGACATTTTTTTTTAGAAAA+TGG - chr8_1:63430488-63430507 Msa1206400:exon 20.0%
!! TTTCTTTCTTTCTTTTCTTC+AGG - chr8_1:63422337-63422356 Msa1206400:intron 25.0%
!! TTCTTTCTTTCTTTTCTTCA+GGG - chr8_1:63422338-63422357 Msa1206400:intron 25.0%
!! TAGTTATTTCATTGCAACTA+CGG - chr8_1:63422589-63422608 Msa1206400:CDS 25.0%
!!! GTTTAGTTCAAAGTTCATTT+TGG - chr8_1:63422846-63422865 Msa1206400:intron 25.0%
! TTGAATAAGAAAGTGAGAAA+TGG - chr8_1:63422927-63422946 Msa1206400:intron 25.0%
!! GGTTGATTTATTCAACAATT+TGG - chr8_1:63422955-63422974 Msa1206400:intron 25.0%
!!! GATTTTTCAAAATAAGAGCA+TGG - chr8_1:63423006-63423025 Msa1206400:intron 25.0%
! CCAAATCAAATTGCATAAAT+TGG + chr8_1:63423602-63423621 None:intergenic 25.0%
! CCAATTTATGCAATTTGATT+TGG - chr8_1:63423599-63423618 Msa1206400:intron 25.0%
!!! TATGCAATTTGATTTGGATT+AGG - chr8_1:63423605-63423624 Msa1206400:intron 25.0%
! CAAACACTATATACGTATAA+GGG - chr8_1:63423922-63423941 Msa1206400:intron 25.0%
! ACCTAGCTATAATTAAAATG+GGG + chr8_1:63423983-63424002 None:intergenic 25.0%
! GACCTAGCTATAATTAAAAT+GGG + chr8_1:63423984-63424003 None:intergenic 25.0%
!!! GTAGTAGTTTTTTGTTGAAT+CGG + chr8_1:63424228-63424247 None:intergenic 25.0%
! GTGCATATAACACATTAATT+TGG + chr8_1:63424252-63424271 None:intergenic 25.0%
! ATTATACTCAAATGCTAGTT+AGG + chr8_1:63424274-63424293 None:intergenic 25.0%
! GTATAATATCTATGAGCTAA+TGG - chr8_1:63424287-63424306 Msa1206400:CDS 25.0%
!!! TTTGTTTTCATGATGATAGA+GGG - chr8_1:63424366-63424385 Msa1206400:intron 25.0%
! TTTAGCAAATATACAAGGTT+TGG + chr8_1:63425233-63425252 None:intergenic 25.0%
! CATGATGCATAATATTTATG+AGG - chr8_1:63425297-63425316 Msa1206400:intron 25.0%
! ACATATGCTTAACATATTCA+AGG + chr8_1:63425334-63425353 None:intergenic 25.0%
! ACACATTAGATCAAATCTTA+TGG - chr8_1:63425367-63425386 Msa1206400:CDS 25.0%
!!! GCTCTATTTTGTTTTTTGTT+TGG - chr8_1:63425632-63425651 Msa1206400:intron 25.0%
! TTCAGAAATTGAAAAGATGA+AGG + chr8_1:63425929-63425948 None:intergenic 25.0%
! AAATGATGTCAAATTGTCAA+TGG + chr8_1:63425990-63426009 None:intergenic 25.0%
! AGTTTATAAACAATAGTGAG+AGG + chr8_1:63426242-63426261 None:intergenic 25.0%
!! AACATTTTCATCATTGTTTC+AGG - chr8_1:63426315-63426334 Msa1206400:intron 25.0%
!!! TATTTTTATACATGCATGCA+AGG - chr8_1:63427200-63427219 Msa1206400:intron 25.0%
! ATTGAATGTTCAAAATTTGG+AGG + chr8_1:63427283-63427302 None:intergenic 25.0%
! GTTTATAAATCATAAAAGGG+TGG + chr8_1:63427365-63427384 None:intergenic 25.0%
! AGAATCTTCAAATGTGAAAT+GGG + chr8_1:63427468-63427487 None:intergenic 25.0%
! AAGAATCTTCAAATGTGAAA+TGG + chr8_1:63427469-63427488 None:intergenic 25.0%
! ACTCTGTAAATGTTAATGTT+TGG - chr8_1:63427893-63427912 Msa1206400:intron 25.0%
!! ATGTTAATGTTTGGATTTTC+TGG - chr8_1:63427902-63427921 Msa1206400:intron 25.0%
! TGACAATTCATGTCTATAAT+TGG - chr8_1:63427968-63427987 Msa1206400:intron 25.0%
!!! TCTTTGGTTCCAATATATTT+TGG - chr8_1:63428659-63428678 Msa1206400:intron 25.0%
! TTAGATTATATACTCATCAG+TGG + chr8_1:63429268-63429287 None:intergenic 25.0%
! TATAATCTAACTATCCCATT+AGG - chr8_1:63428843-63428862 Msa1206400:intron 25.0%
! TATAATCTAACTATCCCATT+AGG + chr8_1:63428843-63428862 None:intergenic 25.0%
! TTAGATTATATACTCATCAG+TGG - chr8_1:63429268-63429287 Msa1206400:intron 25.0%
! TCTTTCAATGTAGAATACTT+TGG + chr8_1:63429447-63429466 None:intergenic 25.0%
!! TATTGACTAGTAATAGTGTT+AGG - chr8_1:63429571-63429590 Msa1206400:intron 25.0%
!! TAATATTTCAGGTAACTTCT+AGG - chr8_1:63429709-63429728 Msa1206400:intron 25.0%
!! GTTGTGATTTTTATGTGAAT+AGG - chr8_1:63429822-63429841 Msa1206400:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr8_1:63430378-63430397 Msa1206400:intron 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - chr8_1:63430466-63430485 Msa1206400:CDS 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - chr8_1:63430467-63430486 Msa1206400:CDS 25.0%
! GTATTTGTACAATACTGAAA+TGG + chr8_1:63430550-63430569 None:intergenic 25.0%
! CAAAACAATAGCAATCGTTT+TGG + chr8_1:63422130-63422149 None:intergenic 30.0%
!! CAAAACGATTGCTATTGTTT+TGG - chr8_1:63422128-63422147 Msa1206400:three_prime_UTR 30.0%
! TAGAGTGGAGTCATAAATTT+TGG + chr8_1:63422452-63422471 None:intergenic 30.0%
! TCTAGTACATTAAGGTTTTC+TGG + chr8_1:63422650-63422669 None:intergenic 30.0%
CTTGATGAACTTAATCAAGT+TGG + chr8_1:63422787-63422806 None:intergenic 30.0%
TTTGAACTAAACTGCAAAGT+AGG + chr8_1:63422838-63422857 None:intergenic 30.0%
!! AGAAAGTGAGAAATGGATTT+TGG - chr8_1:63422934-63422953 Msa1206400:intron 30.0%
!! TTTTCAAAATAAGAGCATGG+AGG - chr8_1:63423009-63423028 Msa1206400:intron 30.0%
ATCCATTCATAAAACAGACA+GGG + chr8_1:63423099-63423118 None:intergenic 30.0%
AATCCATTCATAAAACAGAC+AGG + chr8_1:63423100-63423119 None:intergenic 30.0%
!! GTCTGTTTTATGAATGGATT+TGG - chr8_1:63423100-63423119 Msa1206400:intron 30.0%
!! GAAACCAGAAAAAGTATTGA+GGG - chr8_1:63423314-63423333 Msa1206400:intron 30.0%
TCTTGAGAATAATAATAGGC+AGG - chr8_1:63423729-63423748 Msa1206400:intron 30.0%
! ACATATATTATTTTCAGCGC+AGG + chr8_1:63423867-63423886 None:intergenic 30.0%
! TGATGCATTTTCATAAAGCT+GGG - chr8_1:63423895-63423914 Msa1206400:intron 30.0%
GCAAACACTATATACGTATA+AGG - chr8_1:63423921-63423940 Msa1206400:intron 30.0%
ACTATATACGTATAAGGGTA+TGG - chr8_1:63423927-63423946 Msa1206400:intron 30.0%
! TGGTAGTTCTACATCTTTAA+AGG - chr8_1:63423947-63423966 Msa1206400:intron 30.0%
! GGTAGTTCTACATCTTTAAA+GGG - chr8_1:63423948-63423967 Msa1206400:intron 30.0%
GGACCTAGCTATAATTAAAA+TGG + chr8_1:63423985-63424004 None:intergenic 30.0%
!!! TTTGGGGCTTATTAGTTTTT+TGG - chr8_1:63424035-63424054 Msa1206400:intron 30.0%
AGCAAAACATACAAACACAA+AGG + chr8_1:63424066-63424085 None:intergenic 30.0%
TTGTCAGCATTACAACAAAA+GGG - chr8_1:63424334-63424353 Msa1206400:intron 30.0%
!! GTTTGTTTTCATGATGATAG+AGG - chr8_1:63424365-63424384 Msa1206400:intron 30.0%
! TTGTTTTCATGATGATAGAG+GGG - chr8_1:63424367-63424386 Msa1206400:intron 30.0%
TAAGTTAATGCCATCTTCTA+TGG - chr8_1:63424588-63424607 Msa1206400:intron 30.0%
AAAGAATCAACCATAGAAGA+TGG + chr8_1:63424601-63424620 None:intergenic 30.0%
! AATAATAACGCTTGGTAGTT+GGG + chr8_1:63424724-63424743 None:intergenic 30.0%
! AAATAATAACGCTTGGTAGT+TGG + chr8_1:63424725-63424744 None:intergenic 30.0%
AACTACCAAGCGTTATTATT+TGG - chr8_1:63424724-63424743 Msa1206400:intron 30.0%
AGTATCCAAATAATAACGCT+TGG + chr8_1:63424732-63424751 None:intergenic 30.0%
ATATTCAAGAGTTACCAATC+AGG + chr8_1:63424992-63425011 None:intergenic 30.0%
! TGAATATCCTCATTTCGTTT+TGG - chr8_1:63425005-63425024 Msa1206400:intron 30.0%
ATCTTAACCAAAACGAAATG+AGG + chr8_1:63425015-63425034 None:intergenic 30.0%
ATGCTTAACATATTCAAGGA+AGG + chr8_1:63425330-63425349 None:intergenic 30.0%
! TTATCTGCTTCTCTTTTTAG+AGG - chr8_1:63425662-63425681 Msa1206400:intron 30.0%
TTTAGAGGTCGTAGTAATAT+CGG - chr8_1:63425677-63425696 Msa1206400:intron 30.0%
! CTTGAATTTTCTGCAAAAGT+GGG + chr8_1:63425862-63425881 None:intergenic 30.0%
! TCTTGAATTTTCTGCAAAAG+TGG + chr8_1:63425863-63425882 None:intergenic 30.0%
TTTGCAGAAAATTCAAGATC+AGG - chr8_1:63425865-63425884 Msa1206400:intron 30.0%
ATGTCAAATTGTCAATGGTT+TGG + chr8_1:63425985-63426004 None:intergenic 30.0%
AACTTATCACCTTCAGTATA+TGG + chr8_1:63426112-63426131 None:intergenic 30.0%
! CATCATTGTTTCAGGTAATT+TGG - chr8_1:63426323-63426342 Msa1206400:intron 30.0%
ATTATTTGAATCCCACAAGT+AGG - chr8_1:63426365-63426384 Msa1206400:intron 30.0%
GGTTTCCATTATGAAAGATT+AGG + chr8_1:63426579-63426598 None:intergenic 30.0%
!!! TTTTTTTCTCTAAAGAGCTG+AGG + chr8_1:63426606-63426625 None:intergenic 30.0%
! ACGGCTGAAATTAAAACTTT+TGG + chr8_1:63426750-63426769 None:intergenic 30.0%
!!! AAAGTTTTAATTTCAGCCGT+TGG - chr8_1:63426750-63426769 Msa1206400:intron 30.0%
GATTAGATTACAACTTTGTG+AGG + chr8_1:63426795-63426814 None:intergenic 30.0%
ACAAAGCATGAACAGTTATT+TGG + chr8_1:63426906-63426925 None:intergenic 30.0%
!!! TTTTGAAGTTGTTAGAGTTC+TGG + chr8_1:63426960-63426979 None:intergenic 30.0%
AATAAGCATATGAATCAACC+TGG + chr8_1:63427258-63427277 None:intergenic 30.0%
TCAAATACCACAATAATAGC+AGG + chr8_1:63427319-63427338 None:intergenic 30.0%
TTATTGTGGTATTTGAACGA+AGG - chr8_1:63427323-63427342 Msa1206400:intron 30.0%
TATAAATCATAAAAGGGTGG+AGG + chr8_1:63427362-63427381 None:intergenic 30.0%
TGTACTTTGTAAAACGTTCA+AGG - chr8_1:63427513-63427532 Msa1206400:intron 30.0%
AGTAATGTAAATAACCTGTC+AGG - chr8_1:63427583-63427602 Msa1206400:CDS 30.0%
TTTATCCGTCGAATTAACTA+GGG + chr8_1:63427640-63427659 None:intergenic 30.0%
GGTACATTATTCCTATATTC+TGG - chr8_1:63427686-63427705 Msa1206400:intron 30.0%
CATTATTCCTATATTCTGGA+AGG - chr8_1:63427690-63427709 Msa1206400:intron 30.0%
ACCATTAACACTGATAATAG+TGG + chr8_1:63427801-63427820 None:intergenic 30.0%
!! AAGCAATTCTGAAATGCTTT+GGG - chr8_1:63427829-63427848 Msa1206400:intron 30.0%
!!! ATTAGAATGCCCCATTTTTT+AGG - chr8_1:63428041-63428060 Msa1206400:intron 30.0%
TGAGTATACGCCTAAAAAAT+GGG + chr8_1:63428054-63428073 None:intergenic 30.0%
TTGAGTATACGCCTAAAAAA+TGG + chr8_1:63428055-63428074 None:intergenic 30.0%
CTTGAGTTTATGAGAGATTT+GGG + chr8_1:63428275-63428294 None:intergenic 30.0%
TTAACATTAAGAAACTCTCC+AGG + chr8_1:63428405-63428424 None:intergenic 30.0%
TGGAGAGTTTCTTAATGTTA+AGG - chr8_1:63428404-63428423 Msa1206400:intron 30.0%
!!! CAGTATTTTTTTGTAAGGTC+AGG + chr8_1:63428604-63428623 None:intergenic 30.0%
CTGACCTTACAAAAAAATAC+TGG - chr8_1:63428602-63428621 Msa1206400:intron 30.0%
TCCAAAATAGTGACATTCTT+TGG - chr8_1:63428643-63428662 Msa1206400:intron 30.0%
! ACCAAAGAATGTCACTATTT+TGG + chr8_1:63428647-63428666 None:intergenic 30.0%
TATATTGGGCTTAATGTGAA+CGG - chr8_1:63428748-63428767 Msa1206400:intron 30.0%
AATGGTCTGACTAATAAGAA+TGG + chr8_1:63428790-63428809 None:intergenic 30.0%
TTTAGTGTGTCTAACCTAAT+GGG + chr8_1:63429241-63429260 None:intergenic 30.0%
! TTTTAGTGTGTCTAACCTAA+TGG + chr8_1:63428861-63428880 None:intergenic 30.0%
ATGGATTCTTCAACTATTCA+AGG - chr8_1:63428947-63428966 Msa1206400:intron 30.0%
ATGGATTCTTCAACTATTCA+AGG + chr8_1:63428947-63428966 None:intergenic 30.0%
TTTAGTGTGTCTAACCTAAT+GGG - chr8_1:63429241-63429260 Msa1206400:intron 30.0%
!! AATGGGTTGACTAATAAGAA+CGG - chr8_1:63429307-63429326 Msa1206400:intron 30.0%
ATAGACTTACATACTAGTTG+TGG + chr8_1:63429673-63429692 None:intergenic 30.0%
TAGTATGTAAGTCTATATGC+AGG - chr8_1:63429677-63429696 Msa1206400:intron 30.0%
AGTATGTAAGTCTATATGCA+GGG - chr8_1:63429678-63429697 Msa1206400:intron 30.0%
GATACCCATGACAAAATATA+GGG + chr8_1:63429766-63429785 None:intergenic 30.0%
TGATACCCATGACAAAATAT+AGG + chr8_1:63429767-63429786 None:intergenic 30.0%
! TTTTTATGTGAATAGGTACC+CGG - chr8_1:63429829-63429848 Msa1206400:intron 30.0%
TGTTAGATAAATGTCACGAA+TGG - chr8_1:63430139-63430158 Msa1206400:intron 30.0%
! TTATTAGCTCTCATATGGTT+AGG - chr8_1:63430222-63430241 Msa1206400:CDS 30.0%
ATGCATTGAATCTCATCATA+TGG - chr8_1:63430264-63430283 Msa1206400:CDS 30.0%
TGTATAAACAAAAGGGAAAG+TGG - chr8_1:63430363-63430382 Msa1206400:intron 30.0%
AATCAAAGGTTCAAAGCTAA+AGG + chr8_1:63430583-63430602 None:intergenic 30.0%
!! AATAGCAATCGTTTTGGACA+TGG + chr8_1:63422124-63422143 None:intergenic 35.0%
ATGCCTTGGCAAAATACTAT+AGG + chr8_1:63422154-63422173 None:intergenic 35.0%
ATAGCTTCGATTAGTAACGA+AGG + chr8_1:63422288-63422307 None:intergenic 35.0%
! TCTTTTCTTCAGGGTTGTTT+AGG - chr8_1:63422347-63422366 Msa1206400:intron 35.0%
AGGGTTGTTTAGGTATTCAT+TGG - chr8_1:63422357-63422376 Msa1206400:intron 35.0%
! TTACTTTGGAGATTAAGAGG+AGG + chr8_1:63422475-63422494 None:intergenic 35.0%
TCCTCTTAATCTCCAAAGTA+AGG - chr8_1:63422474-63422493 Msa1206400:three_prime_UTR 35.0%
CCTCTTAATCTCCAAAGTAA+GGG - chr8_1:63422475-63422494 Msa1206400:three_prime_UTR 35.0%
CAAAGATGTTACCCTTACTT+TGG + chr8_1:63422489-63422508 None:intergenic 35.0%
TTGACGAGTCTAGTACATTA+AGG + chr8_1:63422658-63422677 None:intergenic 35.0%
!! GAACTTAATCAAGTTGGTAG+AGG + chr8_1:63422781-63422800 None:intergenic 35.0%
CTATCAGTTTGAGTGTTTGA+CGG - chr8_1:63422896-63422915 Msa1206400:intron 35.0%
TATCAGTTTGAGTGTTTGAC+GGG - chr8_1:63422897-63422916 Msa1206400:intron 35.0%
GGATGGGATTAAGTCTTTAT+TGG - chr8_1:63423045-63423064 Msa1206400:intron 35.0%
TGGGATTAAGTCTTTATTGG+AGG - chr8_1:63423048-63423067 Msa1206400:intron 35.0%
GATTAAGTCTTTATTGGAGG+TGG - chr8_1:63423051-63423070 Msa1206400:intron 35.0%
CATCCAAGAAACAATCTTCA+GGG + chr8_1:63423128-63423147 None:intergenic 35.0%
TCATCCAAGAAACAATCTTC+AGG + chr8_1:63423129-63423148 None:intergenic 35.0%
!! TTGTATGTTGCTGGTTTATG+TGG - chr8_1:63423165-63423184 Msa1206400:intron 35.0%
!!! GTTTCAAGTTTCAGTTTTGC+TGG - chr8_1:63423197-63423216 Msa1206400:intron 35.0%
CCAATCAAAACATCACCAAA+AGG + chr8_1:63423282-63423301 None:intergenic 35.0%
!!! CCTTTTGGTGATGTTTTGAT+TGG - chr8_1:63423279-63423298 Msa1206400:intron 35.0%
!!! TTGGTGATGTTTTGATTGGT+TGG - chr8_1:63423283-63423302 Msa1206400:intron 35.0%
!!! ATGTTTTGATTGGTTGGTCA+GGG - chr8_1:63423289-63423308 Msa1206400:intron 35.0%
!! CGAAACCAGAAAAAGTATTG+AGG - chr8_1:63423313-63423332 Msa1206400:intron 35.0%
! TACTCTCTCATACCTTTTGT+AGG + chr8_1:63423446-63423465 None:intergenic 35.0%
TAATCACACGTGTTTCAGTT+TGG - chr8_1:63423548-63423567 Msa1206400:intron 35.0%
! GTGATGCATTTTCATAAAGC+TGG - chr8_1:63423894-63423913 Msa1206400:intron 35.0%
! AGTTCTACATCTTTAAAGGG+TGG - chr8_1:63423951-63423970 Msa1206400:intron 35.0%
!!! GCCCCATTTTAATTATAGCT+AGG - chr8_1:63423979-63423998 Msa1206400:intron 35.0%
CTTGTCAGCATTACAACAAA+AGG - chr8_1:63424333-63424352 Msa1206400:intron 35.0%
! TGTTTTCATGATGATAGAGG+GGG - chr8_1:63424368-63424387 Msa1206400:intron 35.0%
ATGCATATATAGCTAGACGT+AGG - chr8_1:63424442-63424461 Msa1206400:CDS 35.0%
CACACACATACACATATAAC+TGG - chr8_1:63424527-63424546 Msa1206400:intron 35.0%
GAAGTTCACAACTTCATCTA+GGG + chr8_1:63424630-63424649 None:intergenic 35.0%
TGAAGTTCACAACTTCATCT+AGG + chr8_1:63424631-63424650 None:intergenic 35.0%
ACTGAAAGAATTGAACCAAG+TGG - chr8_1:63424680-63424699 Msa1206400:intron 35.0%
!! TTTTGTTTGTCAGATTTGCC+TGG - chr8_1:63424896-63424915 Msa1206400:intron 35.0%
TCACCAGAAAGTCATGTTTA+TGG - chr8_1:63424959-63424978 Msa1206400:intron 35.0%
TTCCTGTGTGGTAACTTTAT+TGG - chr8_1:63425046-63425065 Msa1206400:CDS 35.0%
!! TGTGGTAACTTTATTGGCTT+TGG - chr8_1:63425052-63425071 Msa1206400:CDS 35.0%
TTCGTGATGAAACTTTGCTT+CGG - chr8_1:63425195-63425214 Msa1206400:intron 35.0%
TTTGATCTAATGTGTTGCAG+AGG + chr8_1:63425362-63425381 None:intergenic 35.0%
ATAGTCAATGTCAGAAAACC+AGG - chr8_1:63425442-63425461 Msa1206400:intron 35.0%
TTAGAGGTCGTAGTAATATC+GGG - chr8_1:63425678-63425697 Msa1206400:intron 35.0%
TTAAAGTTCGTAACTGCAAC+TGG - chr8_1:63425806-63425825 Msa1206400:intron 35.0%
AAAACTAGTATCAGACTGAC+AGG + chr8_1:63426161-63426180 None:intergenic 35.0%
!! TGTCAGTCTGATACTAGTTT+TGG - chr8_1:63426160-63426179 Msa1206400:intron 35.0%
!!! GTCAGTCTGATACTAGTTTT+GGG - chr8_1:63426161-63426180 Msa1206400:intron 35.0%
!!! TCAGTCTGATACTAGTTTTG+GGG - chr8_1:63426162-63426181 Msa1206400:intron 35.0%
TGATCATGATGTCAGTATTG+AGG - chr8_1:63426419-63426438 Msa1206400:intron 35.0%
TGGATTATTGGACTCATTGA+TGG - chr8_1:63426497-63426516 Msa1206400:intron 35.0%
TCGAGCCTAATCTTTCATAA+TGG - chr8_1:63426571-63426590 Msa1206400:intron 35.0%
!!! TGAGGCAAGTAGTCATTTTT+GGG + chr8_1:63426653-63426672 None:intergenic 35.0%
!! TTGAGGCAAGTAGTCATTTT+TGG + chr8_1:63426654-63426673 None:intergenic 35.0%
!!! TTTTAATTTCAGCCGTTGGA+GGG - chr8_1:63426754-63426773 Msa1206400:intron 35.0%
ATCTAATCTAATGGCCTACA+TGG - chr8_1:63426817-63426836 Msa1206400:intron 35.0%
! TTACACACAGTTTTCCATGT+AGG + chr8_1:63426834-63426853 None:intergenic 35.0%
TTGCATGCATGTATCTTGAA+TGG + chr8_1:63427175-63427194 None:intergenic 35.0%
TATGCCATGTTATCAATTCC+AGG - chr8_1:63427237-63427256 Msa1206400:intron 35.0%
! TCAACCTGGAATTGATAACA+TGG + chr8_1:63427244-63427263 None:intergenic 35.0%
TCTCATTCTGATGAATGATC+AGG + chr8_1:63427407-63427426 None:intergenic 35.0%
TTATCCGTCGAATTAACTAG+GGG + chr8_1:63427639-63427658 None:intergenic 35.0%
GTTTATCCGTCGAATTAACT+AGG + chr8_1:63427641-63427660 None:intergenic 35.0%
CATAATGCCTTCCAGAATAT+AGG + chr8_1:63427700-63427719 None:intergenic 35.0%
GCCACTATTATCAGTGTTAA+TGG - chr8_1:63427797-63427816 Msa1206400:intron 35.0%
!! GAAGCAATTCTGAAATGCTT+TGG - chr8_1:63427828-63427847 Msa1206400:intron 35.0%
GAGTATACGCCTAAAAAATG+GGG + chr8_1:63428053-63428072 None:intergenic 35.0%
! AGTCTAGCTTACCAATAAGA+GGG + chr8_1:63428126-63428145 None:intergenic 35.0%
! ATCTGATGATGCATACAGAA+AGG + chr8_1:63428192-63428211 None:intergenic 35.0%
AAAGCTACTTCCAATGTCTT+TGG - chr8_1:63428224-63428243 Msa1206400:intron 35.0%
AAGTCATATGCCAAAGACAT+TGG + chr8_1:63428237-63428256 None:intergenic 35.0%
CCTTGAGTTTATGAGAGATT+TGG + chr8_1:63428276-63428295 None:intergenic 35.0%
CCAAATCTCTCATAAACTCA+AGG - chr8_1:63428273-63428292 Msa1206400:intron 35.0%
AAATCCATTATCTGCAAGCA+TGG + chr8_1:63428378-63428397 None:intergenic 35.0%
! ACAAACCATGCTGGTTATAA+TGG + chr8_1:63428525-63428544 None:intergenic 35.0%
TTTATCGTTTGGGTGATAGT+TGG - chr8_1:63428566-63428585 Msa1206400:intron 35.0%
!!! CAGGCCAGTATTTTTTTGTA+AGG + chr8_1:63428609-63428628 None:intergenic 35.0%
TATTAGTCAGACCATTTGAG+AGG - chr8_1:63428794-63428813 Msa1206400:intron 35.0%
GATTATATACTCATCAGTGG+AGG + chr8_1:63429271-63429290 None:intergenic 35.0%
CATAGAGACTTGAGAGAATT+AGG + chr8_1:63429170-63429189 None:intergenic 35.0%
CTAATTCTCTCAAGTCTCTA+TGG - chr8_1:63428928-63428947 Msa1206400:intron 35.0%
CTATTCAAGGTACACGATTA+TGG - chr8_1:63428960-63428979 Msa1206400:intron 35.0%
CTTCAACTATTCAAGGTACA+CGG + chr8_1:63428954-63428973 None:intergenic 35.0%
CTAATTCTCTCAAGTCTCTA+TGG + chr8_1:63428928-63428947 None:intergenic 35.0%
GTTTAGTGTGTCTAACCTAA+TGG - chr8_1:63429240-63429259 Msa1206400:intron 35.0%
GATTATATACTCATCAGTGG+AGG - chr8_1:63429271-63429290 Msa1206400:intron 35.0%
TATTAGTCAACCCATTTGAG+AGG + chr8_1:63429303-63429322 None:intergenic 35.0%
TATATTGGGCTTACTGTGAA+CGG + chr8_1:63429349-63429368 None:intergenic 35.0%
!!! AGAGAAATTTTAGTTTGCCG+CGG - chr8_1:63429464-63429483 Msa1206400:intron 35.0%
!!! TTGAGCTTTTGGGTTGAATA+TGG - chr8_1:63429535-63429554 Msa1206400:intron 35.0%
!!! TGAGCTTTTGGGTTGAATAT+GGG - chr8_1:63429536-63429555 Msa1206400:intron 35.0%
!! TTTGGGTTGAATATGGGATT+TGG - chr8_1:63429542-63429561 Msa1206400:intron 35.0%
!! TTGGGTTGAATATGGGATTT+GGG - chr8_1:63429543-63429562 Msa1206400:intron 35.0%
ACAAACATTCATACTTGACC+AGG + chr8_1:63429610-63429629 None:intergenic 35.0%
GTATGAATGTTTGTGCATCT+TGG - chr8_1:63429616-63429635 Msa1206400:intron 35.0%
! CTAGCCCTATATTTTGTCAT+GGG - chr8_1:63429759-63429778 Msa1206400:intron 35.0%
CCATATCATCTTGCAACAAA+CGG - chr8_1:63430004-63430023 Msa1206400:intron 35.0%
!! AACAAACGGACTAATACATG+TGG - chr8_1:63430018-63430037 Msa1206400:intron 35.0%
GAGATTCAATGCATTAGTGT+TGG + chr8_1:63430258-63430277 None:intergenic 35.0%
AGAAAATGGGTCAGATATTC+CGG - chr8_1:63430502-63430521 Msa1206400:exon 35.0%
CAAAGCTAAAGGCAATTCAA+TGG + chr8_1:63430572-63430591 None:intergenic 35.0%
! TGGCCTATAGTATTTTGCCA+AGG - chr8_1:63422148-63422167 Msa1206400:three_prime_UTR 40.0%
TATTCATTGGCGCAAGAAGA+AGG - chr8_1:63422370-63422389 Msa1206400:intron 40.0%
ATTCATTGGCGCAAGAAGAA+GGG - chr8_1:63422371-63422390 Msa1206400:intron 40.0%
! CCCTTACTTTGGAGATTAAG+AGG + chr8_1:63422478-63422497 None:intergenic 40.0%
TACCACCAAATGATTACCCT+TGG - chr8_1:63422873-63422892 Msa1206400:intron 40.0%
GATAGCCAAGGGTAATCATT+TGG + chr8_1:63422881-63422900 None:intergenic 40.0%
ACACTCAAACTGATAGCCAA+GGG + chr8_1:63422892-63422911 None:intergenic 40.0%
AACACTCAAACTGATAGCCA+AGG + chr8_1:63422893-63422912 None:intergenic 40.0%
ATCAGTTTGAGTGTTTGACG+GGG - chr8_1:63422898-63422917 Msa1206400:intron 40.0%
! TCAAAATAAGAGCATGGAGG+TGG - chr8_1:63423012-63423031 Msa1206400:intron 40.0%
! GTCCCTGTCTGTTTTATGAA+TGG - chr8_1:63423094-63423113 Msa1206400:intron 40.0%
! GTACCCTGAAGATTGTTTCT+TGG - chr8_1:63423122-63423141 Msa1206400:intron 40.0%
TTTCTGCTGTTGTATGTTGC+TGG - chr8_1:63423156-63423175 Msa1206400:intron 40.0%
!!! GTTGCTGGTTTATGTGGTTT+TGG - chr8_1:63423171-63423190 Msa1206400:intron 40.0%
! AAGTTTCAGTTTTGCTGGTC+TGG - chr8_1:63423202-63423221 Msa1206400:intron 40.0%
!!! GATGTTTTGATTGGTTGGTC+AGG - chr8_1:63423288-63423307 Msa1206400:intron 40.0%
!! ACCAGAAAAAGTATTGAGGG+TGG - chr8_1:63423317-63423336 Msa1206400:intron 40.0%
!! AGAAAAAGTATTGAGGGTGG+CGG - chr8_1:63423320-63423339 Msa1206400:intron 40.0%
TGGCAATGTGACAATGCTTA+GGG - chr8_1:63423478-63423497 Msa1206400:intron 40.0%
! ACAATGCTTAGGGATTTTCG+TGG - chr8_1:63423488-63423507 Msa1206400:intron 40.0%
! GCATTTTCATAAAGCTGGGT+TGG - chr8_1:63423899-63423918 Msa1206400:intron 40.0%
! TCTACATCTTTAAAGGGTGG+CGG - chr8_1:63423954-63423973 Msa1206400:intron 40.0%
!!! GTGTTTTGGGAGTTCTGTTT+GGG - chr8_1:63424018-63424037 Msa1206400:intron 40.0%
!!! TGTTTTGGGAGTTCTGTTTG+GGG - chr8_1:63424019-63424038 Msa1206400:intron 40.0%
GAAGCCAAAACAAACAGACA+CGG + chr8_1:63424090-63424109 None:intergenic 40.0%
GACACAACTGAACAAAACCA+AGG + chr8_1:63424131-63424150 None:intergenic 40.0%
TTTATTAACGCGCTATACCC+CGG + chr8_1:63424200-63424219 None:intergenic 40.0%
! GTTTTCATGATGATAGAGGG+GGG - chr8_1:63424369-63424388 Msa1206400:intron 40.0%
ATAACTGGACATTTCCTAGC+AGG - chr8_1:63424542-63424561 Msa1206400:intron 40.0%
TTGAGTTTCACCAATCTCAC+AGG + chr8_1:63424568-63424587 None:intergenic 40.0%
! GTATTGAACTGACTCTAACG+TGG - chr8_1:63424873-63424892 Msa1206400:intron 40.0%
AGAGTTACCAATCAGGCAAT+GGG + chr8_1:63424985-63425004 None:intergenic 40.0%
AAGAGTTACCAATCAGGCAA+TGG + chr8_1:63424986-63425005 None:intergenic 40.0%
TGTTTAATCCTCTTCCTGTG+TGG - chr8_1:63425034-63425053 Msa1206400:CDS 40.0%
TAAAGTTACCACACAGGAAG+AGG + chr8_1:63425045-63425064 None:intergenic 40.0%
AGCCAATAAAGTTACCACAC+AGG + chr8_1:63425051-63425070 None:intergenic 40.0%
!! GTAACTTTATTGGCTTTGGC+AGG - chr8_1:63425056-63425075 Msa1206400:CDS 40.0%
CTTTGGCAGGATCAATACAT+CGG - chr8_1:63425069-63425088 Msa1206400:CDS 40.0%
TTTGGCAGGATCAATACATC+GGG - chr8_1:63425070-63425089 Msa1206400:CDS 40.0%
ATAAAGTGTGAGCCCATTTC+AGG + chr8_1:63425112-63425131 None:intergenic 40.0%
ATGTACCTAGCAAAGCTGAA+AGG - chr8_1:63425133-63425152 Msa1206400:intron 40.0%
TCAAACCTTTCAGCTTTGCT+AGG + chr8_1:63425141-63425160 None:intergenic 40.0%
! CATGATTTGTGCGTTACATC+TGG - chr8_1:63425544-63425563 Msa1206400:intron 40.0%
TTATGTTACCAGACAGAGAG+TGG + chr8_1:63425597-63425616 None:intergenic 40.0%
! CAAGTTAAGGGAAAGTGTGA+AGG + chr8_1:63425734-63425753 None:intergenic 40.0%
TGTCGACGTATGCAAGTTAA+GGG + chr8_1:63425746-63425765 None:intergenic 40.0%
ATGTCGACGTATGCAAGTTA+AGG + chr8_1:63425747-63425766 None:intergenic 40.0%
! GTAACTGCAACTGGTTTAGT+TGG - chr8_1:63425815-63425834 Msa1206400:intron 40.0%
AAACCTCTCTACATCATGCA+GGG + chr8_1:63425896-63425915 None:intergenic 40.0%
AAAACCTCTCTACATCATGC+AGG + chr8_1:63425897-63425916 None:intergenic 40.0%
AGATTCATCTTTGTGCTCCA+CGG - chr8_1:63426053-63426072 Msa1206400:intron 40.0%
CTTCTCATTAAGCACTTCAC+TGG - chr8_1:63426392-63426411 Msa1206400:intron 40.0%
TATTGAGGTCGAACATAGCA+CGG - chr8_1:63426434-63426453 Msa1206400:intron 40.0%
! GTCCATGATCTGTGGATTAT+TGG - chr8_1:63426485-63426504 Msa1206400:intron 40.0%
GTCCAATAATCCACAGATCA+TGG + chr8_1:63426490-63426509 None:intergenic 40.0%
CTTACACCAATTATTGCTCC+TGG + chr8_1:63426527-63426546 None:intergenic 40.0%
GTACAGATAGGAGTAGATTG+AGG + chr8_1:63426671-63426690 None:intergenic 40.0%
!!! GTTTTAATTTCAGCCGTTGG+AGG - chr8_1:63426753-63426772 Msa1206400:intron 40.0%
TACAACTTTGTGAGGTCTTG+TGG + chr8_1:63426787-63426806 None:intergenic 40.0%
GCATGAACAGTTATTTGGCA+TGG + chr8_1:63426901-63426920 None:intergenic 40.0%
TAAGCCCAATGCAAATGACA+CGG + chr8_1:63427012-63427031 None:intergenic 40.0%
TGATGAATGATCAGGTCACA+GGG + chr8_1:63427399-63427418 None:intergenic 40.0%
TACATTACTCATGTGACTGC+TGG + chr8_1:63427572-63427591 None:intergenic 40.0%
!! TTCTGAAATGCTTTGGGTTC+AGG - chr8_1:63427835-63427854 Msa1206400:intron 40.0%
! TCTGAAATGCTTTGGGTTCA+GGG - chr8_1:63427836-63427855 Msa1206400:intron 40.0%
AAGTCAAGTCACTCTACGAT+AGG - chr8_1:63427994-63428013 Msa1206400:intron 40.0%
! GTCTAGCTTACCAATAAGAG+GGG + chr8_1:63428125-63428144 None:intergenic 40.0%
! CAGTCTAGCTTACCAATAAG+AGG + chr8_1:63428127-63428146 None:intergenic 40.0%
! TAGACGGACTTTGACAAAGT+AGG + chr8_1:63428300-63428319 None:intergenic 40.0%
TGTACCATGCTTGCAGATAA+TGG - chr8_1:63428371-63428390 Msa1206400:intron 40.0%
!!! CAGATAATGGATTTTCAGCC+TGG - chr8_1:63428384-63428403 Msa1206400:intron 40.0%
!! CATGGTTTGTTGCTATTGGA+AGG - chr8_1:63428535-63428554 Msa1206400:intron 40.0%
! TTGTTGCTATTGGAAGGAGA+AGG - chr8_1:63428541-63428560 Msa1206400:intron 40.0%
!! AGGAGAAGGCATTTATCGTT+TGG - chr8_1:63428555-63428574 Msa1206400:intron 40.0%
!! GGAGAAGGCATTTATCGTTT+GGG - chr8_1:63428556-63428575 Msa1206400:intron 40.0%
AAGAATGGTTCAACCCATCA+CGG + chr8_1:63428775-63428794 None:intergenic 40.0%
CTATTCAAGGTACACGGTTA+TGG + chr8_1:63429140-63429159 None:intergenic 40.0%
TGCGTTTACCTAATGAGTAC+TGG - chr8_1:63429733-63429752 Msa1206400:intron 40.0%
CCATGACAAAATATAGGGCT+AGG + chr8_1:63429761-63429780 None:intergenic 40.0%
! CCTAGCCCTATATTTTGTCA+TGG - chr8_1:63429758-63429777 Msa1206400:intron 40.0%
TTGACGTAGCTTACCATTGT+GGG + chr8_1:63429892-63429911 None:intergenic 40.0%
TTTGACGTAGCTTACCATTG+TGG + chr8_1:63429893-63429912 None:intergenic 40.0%
CTTGTATGCTCAAATTAGCG+GGG + chr8_1:63429942-63429961 None:intergenic 40.0%
CCTTGTATGCTCAAATTAGC+GGG + chr8_1:63429943-63429962 None:intergenic 40.0%
GCCTTGTATGCTCAAATTAG+CGG + chr8_1:63429944-63429963 None:intergenic 40.0%
! CCGTTTGTTGCAAGATGATA+TGG + chr8_1:63430007-63430026 None:intergenic 40.0%
TTGTACAGAAGATACCGTGT+CGG + chr8_1:63430078-63430097 None:intergenic 40.0%
ATCTGTGTGAAATGAGCCAA+GGG + chr8_1:63430334-63430353 None:intergenic 40.0%
AATCTGTGTGAAATGAGCCA+AGG + chr8_1:63430335-63430354 None:intergenic 40.0%
GAAAATGGGTCAGATATTCC+GGG - chr8_1:63430503-63430522 Msa1206400:exon 40.0%
AAGGTTCAATTCGCATGCCT+TGG + chr8_1:63422168-63422187 None:intergenic 45.0%
ATGACTCATGAGTCACGGAA+AGG + chr8_1:63422187-63422206 None:intergenic 45.0%
TGACGATGACTCATGAGTCA+CGG + chr8_1:63422192-63422211 None:intergenic 45.0%
CAGTGTCCACTCTCAAAATG+CGG - chr8_1:63422217-63422236 Msa1206400:intron 45.0%
!! GATAGTCCGCATTTTGAGAG+TGG + chr8_1:63422226-63422245 None:intergenic 45.0%
! AAGAGATAGTACCGGAAACG+AGG + chr8_1:63422260-63422279 None:intergenic 45.0%
AGGTGGAGAAGAGATAGTAC+CGG + chr8_1:63422268-63422287 None:intergenic 45.0%
GCTTCGATTAGTAACGAAGG+TGG + chr8_1:63422285-63422304 None:intergenic 45.0%
AATTCTTCGCTGAGCACAGA+AGG + chr8_1:63422409-63422428 None:intergenic 45.0%
GAGATTAAGAGGAGGTAGAG+TGG + chr8_1:63422467-63422486 None:intergenic 45.0%
AGCCAAGGGTAATCATTTGG+TGG + chr8_1:63422878-63422897 None:intergenic 45.0%
TCAACAATTTGGGCGTGACT+TGG - chr8_1:63422966-63422985 Msa1206400:intron 45.0%
AGGTGGATGAGATAGAGGAT+GGG - chr8_1:63423029-63423048 Msa1206400:intron 45.0%
!!! CTGGTTTATGTGGTTTTGGC+TGG - chr8_1:63423175-63423194 Msa1206400:intron 45.0%
GGTGATTGTCTTGTGCACTT+TGG - chr8_1:63423242-63423261 Msa1206400:intron 45.0%
!! GATCTGCTGTTCTAGCCTTT+TGG - chr8_1:63423264-63423283 Msa1206400:intron 45.0%
!!! GCCACCCTCAATACTTTTTC+TGG + chr8_1:63423321-63423340 None:intergenic 45.0%
AGAGAGTAAACCTTGCAGTG+TGG - chr8_1:63423458-63423477 Msa1206400:intron 45.0%
GTGGCAATGTGACAATGCTT+AGG - chr8_1:63423477-63423496 Msa1206400:intron 45.0%
!!! GGTGTTTTGGGAGTTCTGTT+TGG - chr8_1:63424017-63424036 Msa1206400:intron 45.0%
TCACAACTTCATCTAGGGAG+TGG + chr8_1:63424625-63424644 None:intergenic 45.0%
CAGTGTCACATTTCACCACT+TGG + chr8_1:63424698-63424717 None:intergenic 45.0%
GGGCCATAAACATGACTTTC+TGG + chr8_1:63424965-63424984 None:intergenic 45.0%
TTTATGGCCCATTGCCTGAT+TGG - chr8_1:63424975-63424994 Msa1206400:intron 45.0%
TTGGCAGGATCAATACATCG+GGG - chr8_1:63425071-63425090 Msa1206400:CDS 45.0%
GATGAAACTTTGCTTCGGCA+AGG - chr8_1:63425200-63425219 Msa1206400:intron 45.0%
CGACTGTGAATGATGAAACC+TGG + chr8_1:63425463-63425482 None:intergenic 45.0%
! AAGTGTGAAGGTGTGATTGG+AGG + chr8_1:63425722-63425741 None:intergenic 45.0%
! GGAAAGTGTGAAGGTGTGAT+TGG + chr8_1:63425725-63425744 None:intergenic 45.0%
AACCTCTCTACATCATGCAG+GGG + chr8_1:63425895-63425914 None:intergenic 45.0%
AGCGTCATGGAAATGGAACT+GGG + chr8_1:63425962-63425981 None:intergenic 45.0%
TGGTGTGAGCCATATACTGA+AGG - chr8_1:63426100-63426119 Msa1206400:intron 45.0%
TGAGAAGCAGACCTACTTGT+GGG + chr8_1:63426379-63426398 None:intergenic 45.0%
ATGAGAAGCAGACCTACTTG+TGG + chr8_1:63426380-63426399 None:intergenic 45.0%
CACAGATCATGGACTTTCCA+TGG + chr8_1:63426479-63426498 None:intergenic 45.0%
CATGGAAAGTCCATGATCTG+TGG - chr8_1:63426477-63426496 Msa1206400:intron 45.0%
GGAACACCAGGAGCAATAAT+TGG - chr8_1:63426518-63426537 Msa1206400:intron 45.0%
CCTAATCTACTTGCCGGAAA+CGG - chr8_1:63426705-63426724 Msa1206400:intron 45.0%
AACTGCACCAAATCCGTTTC+CGG + chr8_1:63426721-63426740 None:intergenic 45.0%
! TTTTCAACAGCAGCAGATCC+TGG - chr8_1:63426863-63426882 Msa1206400:intron 45.0%
TTTCAACAGCAGCAGATCCT+GGG - chr8_1:63426864-63426883 Msa1206400:intron 45.0%
!! AAGTCCCGTGTCATTTGCAT+TGG - chr8_1:63427004-63427023 Msa1206400:intron 45.0%
!! AGTCCCGTGTCATTTGCATT+GGG - chr8_1:63427005-63427024 Msa1206400:intron 45.0%
AAGCCCAATGCAAATGACAC+GGG + chr8_1:63427011-63427030 None:intergenic 45.0%
TGACGCTCCTGCTATTATTG+TGG - chr8_1:63427309-63427328 Msa1206400:intron 45.0%
CTGATGAATGATCAGGTCAC+AGG + chr8_1:63427400-63427419 None:intergenic 45.0%
TCGAATTAACTAGGGGCTCT+GGG + chr8_1:63427632-63427651 None:intergenic 45.0%
AGAGCCCCTAGTTAATTCGA+CGG - chr8_1:63427632-63427651 Msa1206400:intron 45.0%
TAGGAATAATGTACCTCCCC+TGG + chr8_1:63427681-63427700 None:intergenic 45.0%
TTACCAATAAGAGGGGAGGA+GGG + chr8_1:63428118-63428137 None:intergenic 45.0%
TAGCTTACCAATAAGAGGGG+AGG + chr8_1:63428122-63428141 None:intergenic 45.0%
! TTGTACGTTGTGGCTTTTGC+AGG - chr8_1:63428495-63428514 Msa1206400:intron 45.0%
GAGGTCCATTATAACCAGCA+TGG - chr8_1:63428517-63428536 Msa1206400:intron 45.0%
CCAATAGCAACAAACCATGC+TGG + chr8_1:63428534-63428553 None:intergenic 45.0%
!! CCAGCATGGTTTGTTGCTAT+TGG - chr8_1:63428531-63428550 Msa1206400:intron 45.0%
TTGGATTCTCTGCAACACTC+AGG + chr8_1:63428628-63428647 None:intergenic 45.0%
TTAATGTGAACGGACCGTGA+TGG - chr8_1:63428758-63428777 Msa1206400:intron 45.0%
TAATGTGAACGGACCGTGAT+GGG - chr8_1:63428759-63428778 Msa1206400:intron 45.0%
ATATACTCATCAGTGGAGGC+AGG + chr8_1:63429275-63429294 None:intergenic 45.0%
AGAAGAACGCTCCATCAGTA+AGG - chr8_1:63428883-63428902 Msa1206400:intron 45.0%
ATATACTCATCAGTGGAGGC+AGG - chr8_1:63429275-63429294 Msa1206400:intron 45.0%
TATACTCATCAGTGGAGGCA+GGG - chr8_1:63429276-63429295 Msa1206400:intron 45.0%
AAGAACGGTACAACCCATCA+CGG - chr8_1:63429322-63429341 Msa1206400:intron 45.0%
!!! GAAATTTTAGTTTGCCGCGG+AGG - chr8_1:63429467-63429486 Msa1206400:intron 45.0%
AAGTCTATATGCAGGGTCTC+TGG - chr8_1:63429685-63429704 Msa1206400:intron 45.0%
GGGTCTCTGGCTAATATTTC+AGG - chr8_1:63429698-63429717 Msa1206400:intron 45.0%
GCTAGGTACCAGTACTCATT+AGG + chr8_1:63429744-63429763 None:intergenic 45.0%
TCAAATTAGCGGGGAACTGA+AGG + chr8_1:63429933-63429952 None:intergenic 45.0%
CCCGCTAATTTGAGCATACA+AGG - chr8_1:63429940-63429959 Msa1206400:intron 45.0%
!! ATACATGTGGTGCTGTCTTC+AGG - chr8_1:63430031-63430050 Msa1206400:intron 45.0%
CTCAGATAAATTGGGACGGA+GGG + chr8_1:63430311-63430330 None:intergenic 45.0%
AGGGCTCAGATAAATTGGGA+CGG + chr8_1:63430315-63430334 None:intergenic 45.0%
TCCCAATTTATCTGAGCCCT+TGG - chr8_1:63430315-63430334 Msa1206400:CDS 45.0%
GCCAAGGGCTCAGATAAATT+GGG + chr8_1:63430319-63430338 None:intergenic 45.0%
AGCCAAGGGCTCAGATAAAT+TGG + chr8_1:63430320-63430339 None:intergenic 45.0%
!!! TTAATGTTATTTATTTATAT+TGG - chr8_1:63428733-63428752 Msa1206400:intron 5.0%
!!! TAATGTTATTTATTTATATT+GGG - chr8_1:63428734-63428753 Msa1206400:intron 5.0%
!! CGCATTTTGAGAGTGGACAC+TGG + chr8_1:63422219-63422238 None:intergenic 50.0%
TTCCTCCTTCTCCTCGTTTC+CGG - chr8_1:63422246-63422265 Msa1206400:intron 50.0%
! TAGTACCGGAAACGAGGAGA+AGG + chr8_1:63422254-63422273 None:intergenic 50.0%
! CAATTTGGGCGTGACTTGGA+AGG - chr8_1:63422970-63422989 Msa1206400:intron 50.0%
CATGGAGGTGGATGAGATAG+AGG - chr8_1:63423024-63423043 Msa1206400:intron 50.0%
GAGGTGGATGAGATAGAGGA+TGG - chr8_1:63423028-63423047 Msa1206400:intron 50.0%
ATTGGAGGTGGAGTTTGAGC+CGG - chr8_1:63423063-63423082 Msa1206400:intron 50.0%
GTGGAGTTTGAGCCGGTTAA+AGG - chr8_1:63423070-63423089 Msa1206400:intron 50.0%
CAGACAGGGACACCTTTAAC+CGG + chr8_1:63423085-63423104 None:intergenic 50.0%
!! TTCAGTTTTGCTGGTCTGGC+TGG - chr8_1:63423206-63423225 Msa1206400:intron 50.0%
! TGGTCTGGCTGGAGCTTTTT+CGG - chr8_1:63423217-63423236 Msa1206400:intron 50.0%
TGTCACATTGCCACACTGCA+AGG + chr8_1:63423471-63423490 None:intergenic 50.0%
ATTATAGCTAGGTCCGTCCC+TGG - chr8_1:63423990-63424009 Msa1206400:intron 50.0%
CAAAACACCAGAACCAGGGA+CGG + chr8_1:63424006-63424025 None:intergenic 50.0%
!!! GTCCCTGGTTCTGGTGTTTT+GGG - chr8_1:63424005-63424024 Msa1206400:intron 50.0%
CTCCCAAAACACCAGAACCA+GGG + chr8_1:63424010-63424029 None:intergenic 50.0%
ACTCCCAAAACACCAGAACC+AGG + chr8_1:63424011-63424030 None:intergenic 50.0%
! GCTGCCGTGTCTGTTTGTTT+TGG - chr8_1:63424083-63424102 Msa1206400:intron 50.0%
!! GCTGCGTTTTGCTTTTGCCT+TGG - chr8_1:63424111-63424130 Msa1206400:intron 50.0%
TAGACACTGCGTGTGAATCC+AGG + chr8_1:63424917-63424936 None:intergenic 50.0%
TGGCAGGATCAATACATCGG+GGG - chr8_1:63425072-63425091 Msa1206400:CDS 50.0%
GAAACTTTGCTTCGGCAAGG+TGG - chr8_1:63425203-63425222 Msa1206400:intron 50.0%
TCTTGTAGCCACTCTCTGTC+TGG - chr8_1:63425586-63425605 Msa1206400:intron 50.0%
TTCCCCTGCATGATGTAGAG+AGG - chr8_1:63425890-63425909 Msa1206400:intron 50.0%
GAGCGTCATGGAAATGGAAC+TGG + chr8_1:63425963-63425982 None:intergenic 50.0%
! GGTTTGGAGCGTCATGGAAA+TGG + chr8_1:63425969-63425988 None:intergenic 50.0%
! GTCAATGGTTTGGAGCGTCA+TGG + chr8_1:63425975-63425994 None:intergenic 50.0%
CATGGATAGAGACCAGTAGC+TGG + chr8_1:63426461-63426480 None:intergenic 50.0%
! CAGCTACTGGTCTCTATCCA+TGG - chr8_1:63426459-63426478 Msa1206400:intron 50.0%
GGACTCATTGATGGAACACC+AGG - chr8_1:63426506-63426525 Msa1206400:intron 50.0%
! TCTCTAAAGAGCTGAGGCTC+TGG + chr8_1:63426600-63426619 None:intergenic 50.0%
GTGCAGCGTGTTGTACAGAT+AGG + chr8_1:63426683-63426702 None:intergenic 50.0%
GCACGACCTAATCTACTTGC+CGG - chr8_1:63426699-63426718 Msa1206400:intron 50.0%
CCGTTTCCGGCAAGTAGATT+AGG + chr8_1:63426708-63426727 None:intergenic 50.0%
! CTACTTGCCGGAAACGGATT+TGG - chr8_1:63426711-63426730 Msa1206400:intron 50.0%
TGTGGCACAAATCCCTCCAA+CGG + chr8_1:63426769-63426788 None:intergenic 50.0%
CAGTTATTTGGCATGGACCG+TGG + chr8_1:63426894-63426913 None:intergenic 50.0%
GGCAGATAAGCATACCTGAC+AGG + chr8_1:63427600-63427619 None:intergenic 50.0%
GTCGAATTAACTAGGGGCTC+TGG + chr8_1:63427633-63427652 None:intergenic 50.0%
AGCCACTCGTTGAAACTCCA+GGG - chr8_1:63427661-63427680 Msa1206400:intron 50.0%
CTTACCAATAAGAGGGGAGG+AGG + chr8_1:63428119-63428138 None:intergenic 50.0%
! TACGTTGTGGCTTTTGCAGG+AGG - chr8_1:63428498-63428517 Msa1206400:intron 50.0%
AGAACGCTCCATCAGTAAGG+CGG - chr8_1:63428886-63428905 Msa1206400:intron 50.0%
AGAAGAACGCTCCATCAGTG+AGG + chr8_1:63429220-63429239 None:intergenic 50.0%
TACTGTGAACGGACCGTGAT+GGG + chr8_1:63429338-63429357 None:intergenic 50.0%
TTACTGTGAACGGACCGTGA+TGG + chr8_1:63429339-63429358 None:intergenic 50.0%
TTAGGCGCATTGAACTTGCC+TGG - chr8_1:63429589-63429608 Msa1206400:intron 50.0%
TGTGAATAGGTACCCGGTTC+AGG - chr8_1:63429835-63429854 Msa1206400:intron 50.0%
TTCAGGCGGGTGATGTCATT+TGG - chr8_1:63429852-63429871 Msa1206400:intron 50.0%
GCTTACCATTGTGGGACGAA+TGG + chr8_1:63429884-63429903 None:intergenic 50.0%
AATTAGCGGGGAACTGAAGG+AGG + chr8_1:63429930-63429949 None:intergenic 50.0%
GCTCAGATAAATTGGGACGG+AGG + chr8_1:63430312-63430331 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG - chr8_1:63430507-63430526 Msa1206400:five_prime_UTR 50.0%
TACCGGAAACGAGGAGAAGG+AGG + chr8_1:63422251-63422270 None:intergenic 55.0%
!! GGTCTGGCTGGAGCTTTTTC+GGG - chr8_1:63423218-63423237 Msa1206400:intron 55.0%
!!! CGTCCCTGGTTCTGGTGTTT+TGG - chr8_1:63424004-63424023 Msa1206400:intron 55.0%
TATACCCCGGTCAAGGTGGA+CGG + chr8_1:63424187-63424206 None:intergenic 55.0%
TCCTAGCAGGCCTGTGAGAT+TGG - chr8_1:63424555-63424574 Msa1206400:intron 55.0%
ACCAATCTCACAGGCCTGCT+AGG + chr8_1:63424559-63424578 None:intergenic 55.0%
TGGTGACTCTGACAACACCG+TGG + chr8_1:63426073-63426092 None:intergenic 55.0%
GTCAGAGTCACCAGTGCTCA+TGG - chr8_1:63426080-63426099 Msa1206400:intron 55.0%
ATGGCTCACACCATGAGCAC+TGG + chr8_1:63426093-63426112 None:intergenic 55.0%
ACATAGCACGGACCAGCTAC+TGG - chr8_1:63426446-63426465 Msa1206400:intron 55.0%
!! AGGGGCTCTGGGACATGATT+TGG + chr8_1:63427621-63427640 None:intergenic 55.0%
CAGCCACTCGTTGAAACTCC+AGG - chr8_1:63427660-63427679 Msa1206400:intron 55.0%
GCCACTCGTTGAAACTCCAG+GGG - chr8_1:63427662-63427681 Msa1206400:intron 55.0%
TCCCCTGGAGTTTCAACGAG+TGG + chr8_1:63427666-63427685 None:intergenic 55.0%
ACTCGTTGAAACTCCAGGGG+AGG - chr8_1:63427665-63427684 Msa1206400:intron 55.0%
TCTCCCTCCTCCCCTCTTAT+TGG - chr8_1:63428112-63428131 Msa1206400:intron 55.0%
TGCTTCAGCCGCCTTACTGA+TGG + chr8_1:63428897-63428916 None:intergenic 55.0%
AGAACGCTCCATCAGTGAGG+CGG + chr8_1:63429217-63429236 None:intergenic 55.0%
GAGGCAGGGACCTCTCAAAT+GGG - chr8_1:63429290-63429309 Msa1206400:intron 55.0%
TATCAGTCGCATCACCTCCG+CGG + chr8_1:63429484-63429503 None:intergenic 55.0%
GAATAGGTACCCGGTTCAGG+CGG - chr8_1:63429838-63429857 Msa1206400:intron 55.0%
AATAGGTACCCGGTTCAGGC+GGG - chr8_1:63429839-63429858 Msa1206400:intron 55.0%
ATGACATCACCCGCCTGAAC+CGG + chr8_1:63429851-63429870 None:intergenic 55.0%
! GGCGGGTGATGTCATTTGGA+TGG - chr8_1:63429856-63429875 Msa1206400:intron 55.0%
TGTCTTCAGGTACGCTGCAC+TGG - chr8_1:63430044-63430063 Msa1206400:intron 55.0%
GTCTTCAGGTACGCTGCACT+GGG - chr8_1:63430045-63430064 Msa1206400:intron 55.0%
TCTTCAGGTACGCTGCACTG+GGG - chr8_1:63430046-63430065 Msa1206400:intron 55.0%
CACTGGGGAAAACTCCGACA+CGG - chr8_1:63430061-63430080 Msa1206400:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG - chr8_1:63430511-63430530 Msa1206400:five_prime_UTR 55.0%
TGAAGTTACTCCCTCCGTCC+CGG + chr8_1:63430524-63430543 None:intergenic 55.0%
!!! CTGGCTGGAGCTTTTTCGGG+TGG - chr8_1:63423221-63423240 Msa1206400:intron 60.0%
CTTGTCCCGTCCACCTTGAC+CGG - chr8_1:63424178-63424197 Msa1206400:intron 60.0%
TTGTCCCGTCCACCTTGACC+GGG - chr8_1:63424179-63424198 Msa1206400:intron 60.0%
ATACCCCGGTCAAGGTGGAC+GGG + chr8_1:63424186-63424205 None:intergenic 60.0%
AACGCGCTATACCCCGGTCA+AGG + chr8_1:63424194-63424213 None:intergenic 60.0%
AGCAGATCCTGGGCGTTCCA+CGG - chr8_1:63426874-63426893 Msa1206400:intron 60.0%
GCAGGCAGGGACCTCTCAAA+TGG + chr8_1:63428808-63428827 None:intergenic 60.0%
CTCATCAGTGGAGGCAGGCA+GGG + chr8_1:63428821-63428840 None:intergenic 60.0%
ACTCATCAGTGGAGGCAGGC+AGG + chr8_1:63428822-63428841 None:intergenic 60.0%
TTCTGCCACCGCCTCACTGA+TGG - chr8_1:63429206-63429225 Msa1206400:intron 60.0%
GGAGGCAGGGACCTCTCAAA+TGG - chr8_1:63429289-63429308 Msa1206400:intron 60.0%
TGACATCACCCGCCTGAACC+GGG + chr8_1:63429850-63429869 None:intergenic 60.0%
TGGCGCCATTCGTCCCACAA+TGG - chr8_1:63429876-63429895 Msa1206400:intron 60.0%
AGCGGGGAACTGAAGGAGGA+GGG + chr8_1:63429926-63429945 None:intergenic 60.0%
TAGCGGGGAACTGAAGGAGG+AGG + chr8_1:63429927-63429946 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG - chr8_1:63430510-63430529 Msa1206400:five_prime_UTR 60.0%
GCTAGGTCCGTCCCTGGTTC+TGG - chr8_1:63423996-63424015 Msa1206400:intron 65.0%
CGGTCAAGGTGGACGGGACA+AGG + chr8_1:63424180-63424199 None:intergenic 65.0%
TGTCCCGTCCACCTTGACCG+GGG - chr8_1:63424180-63424199 Msa1206400:intron 65.0%
GCGCTATACCCCGGTCAAGG+TGG + chr8_1:63424191-63424210 None:intergenic 65.0%
ACGCTCCATCAGTGAGGCGG+TGG + chr8_1:63429214-63429233 None:intergenic 65.0%
GCATGGACCGTGGAACGCCC+AGG + chr8_1:63426884-63426903 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 63422095 63430606 63422095 ID=Msa1206400;Name=Msa1206400
chr8_1 mRNA 63422095 63430606 63422095 ID=Msa1206400-mRNA-1;Parent=Msa1206400;Name=Msa1206400-mRNA-1;_AED=0.25;_eAED=0.25;_QI=103|1|1|1|0.92|0.85|14|254|310
chr8_1 exon 63422095 63422169 63422095 ID=Msa1206400-mRNA-1:exon:20610;Parent=Msa1206400-mRNA-1
chr8_1 exon 63422400 63422648 63422400 ID=Msa1206400-mRNA-1:exon:20609;Parent=Msa1206400-mRNA-1
chr8_1 exon 63422804 63422857 63422804 ID=Msa1206400-mRNA-1:exon:20608;Parent=Msa1206400-mRNA-1
chr8_1 exon 63424114 63424184 63424114 ID=Msa1206400-mRNA-1:exon:20607;Parent=Msa1206400-mRNA-1
chr8_1 exon 63424276 63424314 63424276 ID=Msa1206400-mRNA-1:exon:20606;Parent=Msa1206400-mRNA-1
chr8_1 exon 63424435 63424491 63424435 ID=Msa1206400-mRNA-1:exon:20605;Parent=Msa1206400-mRNA-1
chr8_1 exon 63425015 63425096 63425015 ID=Msa1206400-mRNA-1:exon:20604;Parent=Msa1206400-mRNA-1
chr8_1 exon 63425357 63425442 63425357 ID=Msa1206400-mRNA-1:exon:20603;Parent=Msa1206400-mRNA-1
chr8_1 exon 63426580 63426646 63426580 ID=Msa1206400-mRNA-1:exon:20602;Parent=Msa1206400-mRNA-1
chr8_1 exon 63426790 63426829 63426790 ID=Msa1206400-mRNA-1:exon:20601;Parent=Msa1206400-mRNA-1
chr8_1 exon 63427547 63427623 63427547 ID=Msa1206400-mRNA-1:exon:20600;Parent=Msa1206400-mRNA-1
chr8_1 exon 63427705 63427792 63427705 ID=Msa1206400-mRNA-1:exon:20599;Parent=Msa1206400-mRNA-1
chr8_1 exon 63430211 63430342 63430211 ID=Msa1206400-mRNA-1:exon:20598;Parent=Msa1206400-mRNA-1
chr8_1 exon 63430434 63430606 63430434 ID=Msa1206400-mRNA-1:exon:20597;Parent=Msa1206400-mRNA-1
chr8_1 five_prime_UTR 63430504 63430606 63430504 ID=Msa1206400-mRNA-1:five_prime_utr;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63430434 63430503 63430434 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63430211 63430342 63430211 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63427705 63427792 63427705 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63427547 63427623 63427547 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63426790 63426829 63426790 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63426580 63426646 63426580 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63425357 63425442 63425357 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63425015 63425096 63425015 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63424435 63424491 63424435 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63424276 63424314 63424276 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63424114 63424184 63424114 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63422804 63422857 63422804 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 CDS 63422579 63422648 63422579 ID=Msa1206400-mRNA-1:cds;Parent=Msa1206400-mRNA-1
chr8_1 three_prime_UTR 63422400 63422578 63422400 ID=Msa1206400-mRNA-1:three_prime_utr;Parent=Msa1206400-mRNA-1
chr8_1 three_prime_UTR 63422095 63422169 63422095 ID=Msa1206400-mRNA-1:three_prime_utr;Parent=Msa1206400-mRNA-1
Gene Sequence

>Msa1206400

ATGAGTCATCGTCACTATCCAGTGTCCACTCTCAAAATGCGGACTATCTTCCTCCTTCTCCTCGTTTCCGGGTTGTTTAGGTATTCATTGGCGCAAGAAGAAGGGTTTTGCTCTGCACCTTCTGTGCTCAGCGAAGAATTAAAATCGAAACCTCTTTATTCCAAAATTTATGACTCCACTCTACCTCCTCTTAATCTCCAAAATTTGCCTGGATTCACACGCAGTGTCTATAAGAGAGATCATGCTTTGATATCACCAGAAAGTCATGTTTATGGCCCATTGCCTGATTGGATCAATACATCGGGGGCATTTTTAATTTCACCTGAAATGGGCTCACACTTTATAATGTACCTAGCAAAGCTGAAAGAAAATTCAAGATCAGGACTTCCCCTGCATGATGTAGAGAGATTCATCTTTGTGCTCCACGGTGTTGTCAGAGTCACCAGTGCTCATGGTGTGAGCCATATACTGAAGGTTGATTCATATGCTTATTTTCCTCCAAATTTTGAACATTCAATTGAATCTGACGCTCCTGCTATTATTGTGGTATTTGAACGAAGGTATGCTTATCTGCCAAATCATGTCCCAGAGCCCCTAGTTAATTCGACGGATAAACAGCCACTCGTTGAAACTCCAGGGGAGATTTTTGAACTGCGAAAGCTACTTCCAATGTCTTTGGCATATGACTTCAATATACATATAATGGATTTTCAGCCTGGAGAGTTTCTTAATGTTAAGGAGGTCCATTATAACCAGCATGGTTTGTTGCTATTGGAAGGAGAAGGCATTTATCGTTTGGGTGATAGTTGGTACCCGGTTCAGGCGGGTGATGTCATTTGGATGGCGCCATTCGTCCCACAATGGTACGCTGCACTGGGGAAAACTCCGACACGGTATCTTCTGTACAAAGACGTGAACAGAAGCCCATTATAA

Protein sequence

>Msa1206400

MSHRHYPVSTLKMRTIFLLLLVSGLFRYSLAQEEGFCSAPSVLSEELKSKPLYSKIYDSTLPPLNLQNLPGFTRSVYKRDHALISPESHVYGPLPDWINTSGAFLISPEMGSHFIMYLAKLKENSRSGLPLHDVERFIFVLHGVVRVTSAHGVSHILKVDSYAYFPPNFEHSIESDAPAIIVVFERRYAYLPNHVPEPLVNSTDKQPLVETPGEIFELRKLLPMSLAYDFNIHIMDFQPGEFLNVKEVHYNQHGLLLLEGEGIYRLGDSWYPVQAGDVIWMAPFVPQWYAALGKTPTRYLLYKDVNRSPL*