AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1206450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206450 MtrunA17_Chr4g0055491 96.309 298 11 0 13 310 1 298 0.0 588
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206450 AT4G17050.1 68.792 298 93 0 13 310 1 298 4.57e-156 438

Find 102 sgRNAs with CRISPR-Local

Find 576 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGAATGTTCAAAATT+TGG 0.124447 8_1:+63517911 None:intergenic
TAGAGTGGAGTCATAAATTT+TGG 0.203494 8_1:+63522739 None:intergenic
TTCCTCCTTCTCCTCGTTTC+CGG 0.204164 8_1:-63522946 Msa1206450:intron
GGGCCATAAACATGACTTTC+TGG 0.237286 8_1:+63520247 None:intergenic
TCACCAGAAAGTCATGTTTA+TGG 0.245916 8_1:-63520250 Msa1206450:CDS
ATAAAGTGTGAGCCCATTTC+AGG 0.251326 8_1:+63520100 None:intergenic
AATCAAAATCACAATTATAA+TGG 0.260090 8_1:+63515079 None:intergenic
CCAGCATGGTTTGTTGCTAT+TGG 0.298210 8_1:-63516663 Msa1206450:CDS
AACTTATCACCTTCAGTATA+TGG 0.299139 8_1:+63519100 None:intergenic
ACAAACCATGCTGGTTATAA+TGG 0.317445 8_1:+63516672 None:intergenic
TTCAGGCGGGTGATGTCATT+TGG 0.330112 8_1:-63515341 Msa1206450:CDS
AAAGCTACTTCCAATGTCTT+TGG 0.332406 8_1:-63516970 Msa1206450:CDS
AGGAGAAGGCATTTATCGTT+TGG 0.348546 8_1:-63516639 Msa1206450:CDS
CCAAAACGATTGCTATTGTT+TGG 0.354650 8_1:-63523064 Msa1206450:five_prime_UTR
TGTGAATAGGTACCCGGTTC+AGG 0.358704 8_1:-63515358 Msa1206450:intron
ATGACATCACCCGCCTGAAC+CGG 0.360131 8_1:+63515345 None:intergenic
AGGGGCTCTGGGACATGATT+TGG 0.367925 8_1:+63517576 None:intergenic
CCAAACAATAGCAATCGTTT+TGG 0.370575 8_1:+63523064 None:intergenic
ATCAAAATCACAATTATAAT+GGG 0.370700 8_1:+63515080 None:intergenic
TGGAGAGTTTCTTAATGTTA+AGG 0.373459 8_1:-63516790 Msa1206450:intron
TATATTTATTAGCTCTCATA+TGG 0.380308 8_1:-63514976 Msa1206450:three_prime_UTR
CCCTTACTTTGGAGATTAAG+AGG 0.387626 8_1:+63522713 None:intergenic
AGGGTTGTTTAGGTATTCAT+TGG 0.390429 8_1:-63522831 Msa1206450:CDS
GGAGAAGGCATTTATCGTTT+GGG 0.390850 8_1:-63516638 Msa1206450:CDS
GTCTTCAGGTACGCTGCACT+GGG 0.401122 8_1:-63515148 Msa1206450:intron
TTTGCAGAAAATTCAAGATC+AGG 0.405975 8_1:-63519344 Msa1206450:intron
TTTATGGCCCATTGCCTGAT+TGG 0.406017 8_1:-63520234 Msa1206450:intron
GTCGAATTAACTAGGGGCTC+TGG 0.407908 8_1:+63517564 None:intergenic
GAGATTAAGAGGAGGTAGAG+TGG 0.413997 8_1:+63522724 None:intergenic
TTATTAGCTCTCATATGGTT+AGG 0.420667 8_1:-63514971 Msa1206450:three_prime_UTR
GTTTATCCGTCGAATTAACT+AGG 0.436467 8_1:+63517556 None:intergenic
ATGCCTTGGCAAAATACTAT+AGG 0.444535 8_1:+63523041 None:intergenic
TATTCATTGGCGCAAGAAGA+AGG 0.459022 8_1:-63522818 Msa1206450:CDS
ATGCATTGAATCTCATCATA+TGG 0.464620 8_1:-63514929 Msa1206450:three_prime_UTR
AAGGTTCAATTCGCATGCCT+TGG 0.473071 8_1:+63523027 None:intergenic
AATCAAAGGTTCAAAGCTAA+AGG 0.474487 8_1:+63514613 None:intergenic
GTATTTGTACAATACTGAAA+TGG 0.475602 8_1:+63514646 None:intergenic
TCGAATTAACTAGGGGCTCT+GGG 0.484257 8_1:+63517565 None:intergenic
CATGGTTTGTTGCTATTGGA+AGG 0.492316 8_1:-63516659 Msa1206450:CDS
TAGACACTGCGTGTGAATCC+AGG 0.492364 8_1:+63520295 None:intergenic
TAGGAATAATGTACCTCCCC+TGG 0.496765 8_1:+63517516 None:intergenic
TTTGGCAGGATCAATACATC+GGG 0.498459 8_1:-63520139 Msa1206450:intron
TTAATTATTAAATAAGGTGG+TGG 0.498475 8_1:+63515025 None:intergenic
AAAACCTCTCTACATCATGC+AGG 0.502363 8_1:+63519315 None:intergenic
TTGACGTAGCTTACCATTGT+GGG 0.503289 8_1:+63515304 None:intergenic
AGAGTTACCAATCAGGCAAT+GGG 0.505467 8_1:+63520227 None:intergenic
TCAAACCTTTCAGCTTTGCT+AGG 0.509684 8_1:+63520071 None:intergenic
TTTATCGTTTGGGTGATAGT+TGG 0.509948 8_1:-63516628 Msa1206450:intron
GGCGGGTGATGTCATTTGGA+TGG 0.513354 8_1:-63515337 Msa1206450:CDS
ATTGAATGTTCAAAATTTGG+AGG 0.514704 8_1:+63517914 None:intergenic
CAGCCACTCGTTGAAACTCC+AGG 0.517778 8_1:-63517534 Msa1206450:CDS
TTTATCCGTCGAATTAACTA+GGG 0.520493 8_1:+63517557 None:intergenic
AGCTTGGTGTTGAAAATCAA+AGG 0.532358 8_1:+63514599 None:intergenic
TCAAATACCACAATAATAGC+AGG 0.532548 8_1:+63517878 None:intergenic
GTCAGAGTCACCAGTGCTCA+TGG 0.534419 8_1:-63519129 Msa1206450:CDS
TAGTACCGGAAACGAGGAGA+AGG 0.536548 8_1:+63522941 None:intergenic
AATTCTTCGCTGAGCACAGA+AGG 0.539539 8_1:+63522782 None:intergenic
CAAAGCTAAAGGCAATTCAA+TGG 0.547610 8_1:+63514624 None:intergenic
TGACATCACCCGCCTGAACC+GGG 0.548155 8_1:+63515346 None:intergenic
AAGAGTTACCAATCAGGCAA+TGG 0.552009 8_1:+63520226 None:intergenic
AGATTCATCTTTGTGCTCCA+CGG 0.553805 8_1:-63519156 Msa1206450:CDS
ATATTCAAGAGTTACCAATC+AGG 0.554162 8_1:+63520220 None:intergenic
ATTCATTGGCGCAAGAAGAA+GGG 0.563652 8_1:-63522817 Msa1206450:CDS
ATGGCTCACACCATGAGCAC+TGG 0.568857 8_1:+63519119 None:intergenic
AAGTCATATGCCAAAGACAT+TGG 0.570777 8_1:+63516960 None:intergenic
TACCGGAAACGAGGAGAAGG+AGG 0.570909 8_1:+63522944 None:intergenic
AATAGGTACCCGGTTCAGGC+GGG 0.576983 8_1:-63515354 Msa1206450:intron
GCTTACCATTGTGGGACGAA+TGG 0.580025 8_1:+63515312 None:intergenic
AAACCTCTCTACATCATGCA+GGG 0.584130 8_1:+63519316 None:intergenic
AAGAGATAGTACCGGAAACG+AGG 0.584199 8_1:+63522935 None:intergenic
CCAATAGCAACAAACCATGC+TGG 0.587457 8_1:+63516663 None:intergenic
TCCCCTGGAGTTTCAACGAG+TGG 0.592547 8_1:+63517531 None:intergenic
TTATTGTGGTATTTGAACGA+AGG 0.594533 8_1:-63517871 Msa1206450:intron
GAATAGGTACCCGGTTCAGG+CGG 0.594571 8_1:-63515355 Msa1206450:intron
TTTGACGTAGCTTACCATTG+TGG 0.595739 8_1:+63515303 None:intergenic
TTAACATTAAGAAACTCTCC+AGG 0.597029 8_1:+63516792 None:intergenic
AGCCACTCGTTGAAACTCCA+GGG 0.597354 8_1:-63517533 Msa1206450:CDS
GAGATTCAATGCATTAGTGT+TGG 0.602539 8_1:+63514938 None:intergenic
CTTTGGCAGGATCAATACAT+CGG 0.603198 8_1:-63520140 Msa1206450:intron
TTGTTGCTATTGGAAGGAGA+AGG 0.606426 8_1:-63516653 Msa1206450:CDS
TGACGCTCCTGCTATTATTG+TGG 0.607609 8_1:-63517885 Msa1206450:CDS
TTCCCCTGCATGATGTAGAG+AGG 0.611970 8_1:-63519319 Msa1206450:intron
CACTGGGGAAAACTCCGACA+CGG 0.622193 8_1:-63515132 Msa1206450:CDS
TGTTAGATAAATGTCACGAA+TGG 0.629074 8_1:-63515054 Msa1206450:three_prime_UTR
ATGTACCTAGCAAAGCTGAA+AGG 0.629911 8_1:-63520076 Msa1206450:intron
GAGGTCCATTATAACCAGCA+TGG 0.636159 8_1:-63516677 Msa1206450:CDS
ATGACTCATGAGTCACGGAA+AGG 0.639398 8_1:+63523008 None:intergenic
AGAGCCCCTAGTTAATTCGA+CGG 0.642003 8_1:-63517562 Msa1206450:CDS
TGACGATGACTCATGAGTCA+CGG 0.652633 8_1:+63523003 None:intergenic
TGGCGCCATTCGTCCCACAA+TGG 0.657597 8_1:-63515317 Msa1206450:intron
CAGTGTCCACTCTCAAAATG+CGG 0.668861 8_1:-63522975 Msa1206450:CDS
TGGTGTGAGCCATATACTGA+AGG 0.678734 8_1:-63519109 Msa1206450:intron
ACTCGTTGAAACTCCAGGGG+AGG 0.679003 8_1:-63517529 Msa1206450:intron
AACCTCTCTACATCATGCAG+GGG 0.681979 8_1:+63519317 None:intergenic
TTATCCGTCGAATTAACTAG+GGG 0.689589 8_1:+63517558 None:intergenic
TGGCAGGATCAATACATCGG+GGG 0.695468 8_1:-63520137 Msa1206450:intron
TTACTTTGGAGATTAAGAGG+AGG 0.697440 8_1:+63522716 None:intergenic
GCCACTCGTTGAAACTCCAG+GGG 0.709562 8_1:-63517532 Msa1206450:CDS
TTGTACAGAAGATACCGTGT+CGG 0.721219 8_1:+63515118 None:intergenic
TGGTGACTCTGACAACACCG+TGG 0.731971 8_1:+63519139 None:intergenic
TTGGCAGGATCAATACATCG+GGG 0.751264 8_1:-63520138 Msa1206450:intron
TCTTCAGGTACGCTGCACTG+GGG 0.784250 8_1:-63515147 Msa1206450:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTAATAATTAATAAA+AGG - chr8_1:63521928-63521947 Msa1206450:intron 0.0%
!!! TTTATTTTAATTATTAAATA+AGG + chr8_1:63522689-63522708 None:intergenic 0.0%
!!! TTTTCTAAAACAAAAATATT+TGG - chr8_1:63517339-63517358 Msa1206450:intron 10.0%
!!! AAAAATGTGTTTTATTATTT+AGG - chr8_1:63519487-63519506 Msa1206450:intron 10.0%
!!! AAAATGTGTTTTATTATTTA+GGG - chr8_1:63519488-63519507 Msa1206450:intron 10.0%
!! TTTGTTTATAAATCATAAAA+GGG + chr8_1:63519879-63519898 None:intergenic 10.0%
!! ATTTGTTTATAAATCATAAA+AGG + chr8_1:63519880-63519899 None:intergenic 10.0%
!!! TTTTAAGTTTTTTACTTTAA+AGG - chr8_1:63520969-63520988 Msa1206450:intron 10.0%
!!! ATTTTAATTATTAAATAAGG+TGG + chr8_1:63522686-63522705 None:intergenic 10.0%
!! AAAGAAAAATAACATAAATG+AGG + chr8_1:63514837-63514856 None:intergenic 15.0%
!!! ATTTTCATATATGAATCAAA+TGG - chr8_1:63515042-63515061 Msa1206450:three_prime_UTR 15.0%
!!! TTCAATCAAATTTGTTTAAA+CGG + chr8_1:63516042-63516061 None:intergenic 15.0%
!! AAACATTTACAATTGTAATT+TGG + chr8_1:63516190-63516209 None:intergenic 15.0%
!! TATTTCTTGAGAATAATAAT+AGG - chr8_1:63516242-63516261 Msa1206450:intron 15.0%
!! ACTATATTTATATTGTAGAA+AGG - chr8_1:63516321-63516340 Msa1206450:intron 15.0%
!!! TACTATAAGATTGTTATTTT+TGG - chr8_1:63517153-63517172 Msa1206450:intron 15.0%
!!! TTTGTTTTAGAAAATAAATC+AGG + chr8_1:63517333-63517352 None:intergenic 15.0%
!!! AGTATTAATTAATTAGTTTG+AGG - chr8_1:63518778-63518797 Msa1206450:intron 15.0%
!!! TAATTTTATTGAAAATGCAT+TGG - chr8_1:63519949-63519968 Msa1206450:intron 15.0%
!! TTGTTGAATTTAAACATAAA+AGG + chr8_1:63520244-63520263 None:intergenic 15.0%
!! ATAATATTAGAAAGATTAGA+CGG + chr8_1:63520827-63520846 None:intergenic 15.0%
!! TAATCTTTCTAATATTATCA+TGG - chr8_1:63520829-63520848 Msa1206450:intron 15.0%
!! AACGTACAAAAAAATTAAAA+AGG + chr8_1:63520995-63521014 None:intergenic 15.0%
!! AAAAGTAATCCAAAATATAT+TGG + chr8_1:63521182-63521201 None:intergenic 15.0%
!!! TATTTTCATATCTATGATTT+TGG - chr8_1:63521511-63521530 Msa1206450:intron 15.0%
!! TCTGTTAAATATTTATCAAT+TGG - chr8_1:63521537-63521556 Msa1206450:intron 15.0%
!! TCTGTTAAATATTTATCAAT+TGG + chr8_1:63521537-63521556 None:intergenic 15.0%
!! AATTGATAAATATTTAACAG+AGG - chr8_1:63521574-63521593 Msa1206450:intron 15.0%
!!! TATTTTCATATCTATGATTT+TGG + chr8_1:63521511-63521530 None:intergenic 15.0%
!!! TTGTACTTGTTATTTATATT+GGG + chr8_1:63521874-63521893 None:intergenic 15.0%
!!! ATTGTACTTGTTATTTATAT+TGG + chr8_1:63521875-63521894 None:intergenic 15.0%
!! ATCAAAATCACAATTATAAT+GGG + chr8_1:63522628-63522647 None:intergenic 15.0%
!! AATCAAAATCACAATTATAA+TGG + chr8_1:63522629-63522648 None:intergenic 15.0%
!! AAGAAAAATGTATAAACAAA+AGG - chr8_1:63522867-63522886 Msa1206450:intron 15.0%
!! AGAAAAATGTATAAACAAAA+GGG - chr8_1:63522868-63522887 Msa1206450:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr8_1:63522931-63522950 Msa1206450:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr8_1:63522932-63522951 Msa1206450:intron 15.0%
!!! GACATTTTTTTTTAGAAAAT+GGG - chr8_1:63523001-63523020 Msa1206450:exon 15.0%
!!! TCATAAATTTTGGAATAAAG+AGG + chr8_1:63514959-63514978 None:intergenic 20.0%
!! ATATATGAAAATAACACAGT+CGG + chr8_1:63515034-63515053 None:intergenic 20.0%
!!! GTTGATTTATTCAACAATTT+GGG - chr8_1:63515473-63515492 Msa1206450:intron 20.0%
!! AAAAACATATATCCTACAAA+AGG - chr8_1:63515948-63515967 Msa1206450:intron 20.0%
!!! AACTACATCAAAATATCTTT+TGG - chr8_1:63517281-63517300 Msa1206450:intron 20.0%
!!! AAAATATCTTTTGGATCTTA+TGG - chr8_1:63517290-63517309 Msa1206450:intron 20.0%
!!! ATTTTTAATTTCACCTGAAA+TGG - chr8_1:63517592-63517611 Msa1206450:CDS 20.0%
!!! TTTTTAATTTCACCTGAAAT+GGG - chr8_1:63517593-63517612 Msa1206450:intron 20.0%
!! TAGTATTTAGCAAATATACA+AGG + chr8_1:63517734-63517753 None:intergenic 20.0%
!! TAAATATTATGCATCATGTA+TGG + chr8_1:63517791-63517810 None:intergenic 20.0%
!! GAAGAAAAATATGTTGTAAA+TGG - chr8_1:63517914-63517933 Msa1206450:CDS 20.0%
!!! GCTCTATTTTTTTTTTTGTT+TGG - chr8_1:63518128-63518147 Msa1206450:intron 20.0%
!! TGTTTATAAACTTATACTTG+TGG - chr8_1:63518746-63518765 Msa1206450:intron 20.0%
!! TCTAATCTAATCTAATCTAA+TGG - chr8_1:63519304-63519323 Msa1206450:intron 20.0%
!! TCAATTGAATGTTCAAAATT+TGG + chr8_1:63519797-63519816 None:intergenic 20.0%
!! GATAGTTAATCGAAAAATTA+AGG - chr8_1:63520286-63520305 Msa1206450:CDS 20.0%
!! TTCTAATATTATCATGGTTT+CGG - chr8_1:63520835-63520854 Msa1206450:intron 20.0%
!!! TTTAATTTTTTTGTACGTTG+TGG - chr8_1:63520996-63521015 Msa1206450:intron 20.0%
!!! TATATAATAACTTGAGCTTT+TGG - chr8_1:63522035-63522054 Msa1206450:intron 20.0%
!!! ATATAATAACTTGAGCTTTT+GGG - chr8_1:63522036-63522055 Msa1206450:intron 20.0%
!! TTAATTATTAAATAAGGTGG+TGG + chr8_1:63522683-63522702 None:intergenic 20.0%
!!! TATATTTATTAGCTCTCATA+TGG - chr8_1:63522729-63522748 Msa1206450:CDS 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr8_1:63522891-63522910 Msa1206450:intron 20.0%
!!! GGACATTTTTTTTTAGAAAA+TGG - chr8_1:63523000-63523019 Msa1206450:exon 20.0%
!! TTTCTTTCTTTCTTTTCTTC+AGG - chr8_1:63514854-63514873 Msa1206450:intron 25.0%
!! TTCTTTCTTTCTTTTCTTCA+GGG - chr8_1:63514855-63514874 Msa1206450:intron 25.0%
!! TAGTTATTTCATTGCAACTA+CGG - chr8_1:63515106-63515125 Msa1206450:CDS 25.0%
!!! GTTTAGTTCAAAGTTCATTT+TGG - chr8_1:63515363-63515382 Msa1206450:intron 25.0%
! TTGAATAAGAAAGTGAGAAA+TGG - chr8_1:63515444-63515463 Msa1206450:intron 25.0%
!! GGTTGATTTATTCAACAATT+TGG - chr8_1:63515472-63515491 Msa1206450:intron 25.0%
!!! GATTTTTCAAAATAAGAGCA+TGG - chr8_1:63515523-63515542 Msa1206450:intron 25.0%
! CCAAATCAAATTGCATAAAT+TGG + chr8_1:63516119-63516138 None:intergenic 25.0%
! CCAATTTATGCAATTTGATT+TGG - chr8_1:63516116-63516135 Msa1206450:intron 25.0%
!!! TATGCAATTTGATTTGGATT+AGG - chr8_1:63516122-63516141 Msa1206450:intron 25.0%
! CAAACACTATATACGTATAA+GGG - chr8_1:63516439-63516458 Msa1206450:intron 25.0%
! ACCTAGCTATAATTAAAATG+GGG + chr8_1:63516500-63516519 None:intergenic 25.0%
! GACCTAGCTATAATTAAAAT+GGG + chr8_1:63516501-63516520 None:intergenic 25.0%
!!! GTAGTAGTTTTTTGTTGAAT+CGG + chr8_1:63516745-63516764 None:intergenic 25.0%
! GTGCATATAACACATTAATT+TGG + chr8_1:63516769-63516788 None:intergenic 25.0%
! ATTATACTCAAATGCTAGTT+AGG + chr8_1:63516791-63516810 None:intergenic 25.0%
! GTATAATATCTATGAGCTAA+TGG - chr8_1:63516804-63516823 Msa1206450:CDS 25.0%
!!! TTTGTTTTCATGATGATAGA+GGG - chr8_1:63516883-63516902 Msa1206450:intron 25.0%
! TTTAGCAAATATACAAGGTT+TGG + chr8_1:63517729-63517748 None:intergenic 25.0%
! CATGATGCATAATATTTATG+AGG - chr8_1:63517793-63517812 Msa1206450:intron 25.0%
! ACATATGCTTAACATATTCA+AGG + chr8_1:63517830-63517849 None:intergenic 25.0%
! ACACATTAGATCAAATCTTA+TGG - chr8_1:63517863-63517882 Msa1206450:intron 25.0%
! TTCAGAAATTGAAAAGATGA+AGG + chr8_1:63518425-63518444 None:intergenic 25.0%
! AAATGATGTCAAATTGTCAA+TGG + chr8_1:63518486-63518505 None:intergenic 25.0%
! AGTTTATAAACAATAGTGAG+AGG + chr8_1:63518738-63518757 None:intergenic 25.0%
!! AACATTTTCATCATTGTTTC+AGG - chr8_1:63518811-63518830 Msa1206450:intron 25.0%
!!! TATTTTTATACATGCATGCA+AGG - chr8_1:63519711-63519730 Msa1206450:intron 25.0%
! ATTGAATGTTCAAAATTTGG+AGG + chr8_1:63519794-63519813 None:intergenic 25.0%
! GTTTATAAATCATAAAAGGG+TGG + chr8_1:63519876-63519895 None:intergenic 25.0%
! AGAATCTTCAAATGTGAAAT+GGG + chr8_1:63519979-63519998 None:intergenic 25.0%
! AAGAATCTTCAAATGTGAAA+TGG + chr8_1:63519980-63519999 None:intergenic 25.0%
! ACTCTGTAAATGTTAATGTT+TGG - chr8_1:63520404-63520423 Msa1206450:intron 25.0%
!! ATGTTAATGTTTGGATTTTC+TGG - chr8_1:63520413-63520432 Msa1206450:intron 25.0%
! TGACAATTCATGTCTATAAT+TGG - chr8_1:63520479-63520498 Msa1206450:intron 25.0%
!!! TCTTTGGTTCCAATATATTT+TGG - chr8_1:63521170-63521189 Msa1206450:intron 25.0%
! TTAGATTATATACTCATCAG+TGG + chr8_1:63521779-63521798 None:intergenic 25.0%
! TATAATCTAACTATCCCATT+AGG - chr8_1:63521354-63521373 Msa1206450:intron 25.0%
! TATAATCTAACTATCCCATT+AGG + chr8_1:63521354-63521373 None:intergenic 25.0%
! TTAGATTATATACTCATCAG+TGG - chr8_1:63521779-63521798 Msa1206450:intron 25.0%
! TCTTTCAATGTAGAATACTT+TGG + chr8_1:63521958-63521977 None:intergenic 25.0%
!! TATTGACTAGTAATAGTGTT+AGG - chr8_1:63522082-63522101 Msa1206450:intron 25.0%
!! TAATATTTCAGGTAACTTCT+AGG - chr8_1:63522220-63522239 Msa1206450:intron 25.0%
!! GTTGTGATTTTTATGTGAAT+AGG - chr8_1:63522334-63522353 Msa1206450:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr8_1:63522890-63522909 Msa1206450:intron 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - chr8_1:63522978-63522997 Msa1206450:CDS 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - chr8_1:63522979-63522998 Msa1206450:CDS 25.0%
! GTATTTGTACAATACTGAAA+TGG + chr8_1:63523062-63523081 None:intergenic 25.0%
! TAGAGTGGAGTCATAAATTT+TGG + chr8_1:63514969-63514988 None:intergenic 30.0%
! TCTAGTACATTAAGGTTTTC+TGG + chr8_1:63515167-63515186 None:intergenic 30.0%
CTTGATGAACTTAATCAAGT+TGG + chr8_1:63515304-63515323 None:intergenic 30.0%
TTTGAACTAAACTGCAAAGT+AGG + chr8_1:63515355-63515374 None:intergenic 30.0%
!! AGAAAGTGAGAAATGGATTT+TGG - chr8_1:63515451-63515470 Msa1206450:intron 30.0%
!! TTTTCAAAATAAGAGCATGG+AGG - chr8_1:63515526-63515545 Msa1206450:intron 30.0%
ATCCATTCATAAAACAGACA+GGG + chr8_1:63515616-63515635 None:intergenic 30.0%
AATCCATTCATAAAACAGAC+AGG + chr8_1:63515617-63515636 None:intergenic 30.0%
!! GTCTGTTTTATGAATGGATT+TGG - chr8_1:63515617-63515636 Msa1206450:intron 30.0%
!! GAAACCAGAAAAAGTATTGA+GGG - chr8_1:63515831-63515850 Msa1206450:intron 30.0%
TCTTGAGAATAATAATAGGC+AGG - chr8_1:63516246-63516265 Msa1206450:intron 30.0%
! ACATATATTATTTTCAGCGC+AGG + chr8_1:63516384-63516403 None:intergenic 30.0%
! TGATGCATTTTCATAAAGCT+GGG - chr8_1:63516412-63516431 Msa1206450:intron 30.0%
GCAAACACTATATACGTATA+AGG - chr8_1:63516438-63516457 Msa1206450:intron 30.0%
ACTATATACGTATAAGGGTA+TGG - chr8_1:63516444-63516463 Msa1206450:intron 30.0%
GGACCTAGCTATAATTAAAA+TGG + chr8_1:63516502-63516521 None:intergenic 30.0%
!!! TTTGGGGCTTATTAGTTTTT+TGG - chr8_1:63516552-63516571 Msa1206450:intron 30.0%
AGCAAAACATACAAACACAA+AGG + chr8_1:63516583-63516602 None:intergenic 30.0%
TTGTCAGCATTACAACAAAA+GGG - chr8_1:63516851-63516870 Msa1206450:intron 30.0%
!! GTTTGTTTTCATGATGATAG+AGG - chr8_1:63516882-63516901 Msa1206450:intron 30.0%
! TTGTTTTCATGATGATAGAG+GGG - chr8_1:63516884-63516903 Msa1206450:intron 30.0%
AAAGAATCAACCATAGAAGA+TGG + chr8_1:63517099-63517118 None:intergenic 30.0%
! AATAATAACGCTTGGTAGTT+GGG + chr8_1:63517222-63517241 None:intergenic 30.0%
! AAATAATAACGCTTGGTAGT+TGG + chr8_1:63517223-63517242 None:intergenic 30.0%
AACTACCAAGCGTTATTATT+TGG - chr8_1:63517222-63517241 Msa1206450:intron 30.0%
AGTATCCAAATAATAACGCT+TGG + chr8_1:63517230-63517249 None:intergenic 30.0%
ATATTCAAGAGTTACCAATC+AGG + chr8_1:63517488-63517507 None:intergenic 30.0%
! TGAATATCCTCATTTCGTTT+TGG - chr8_1:63517501-63517520 Msa1206450:intron 30.0%
ATCTTAACCAAAACGAAATG+AGG + chr8_1:63517511-63517530 None:intergenic 30.0%
ATGCTTAACATATTCAAGGA+AGG + chr8_1:63517826-63517845 None:intergenic 30.0%
! TTATCTGCTTCTCTTTTTAG+AGG - chr8_1:63518158-63518177 Msa1206450:intron 30.0%
TTTAGAGGTCGTAGTAATAT+CGG - chr8_1:63518173-63518192 Msa1206450:intron 30.0%
! CTTGAATTTTCTGCAAAAGT+GGG + chr8_1:63518358-63518377 None:intergenic 30.0%
! TCTTGAATTTTCTGCAAAAG+TGG + chr8_1:63518359-63518378 None:intergenic 30.0%
TTTGCAGAAAATTCAAGATC+AGG - chr8_1:63518361-63518380 Msa1206450:intron 30.0%
ATGTCAAATTGTCAATGGTT+TGG + chr8_1:63518481-63518500 None:intergenic 30.0%
AACTTATCACCTTCAGTATA+TGG + chr8_1:63518608-63518627 None:intergenic 30.0%
! CATCATTGTTTCAGGTAATT+TGG - chr8_1:63518819-63518838 Msa1206450:intron 30.0%
ATTATTTGAATCCCACAAGT+AGG - chr8_1:63518861-63518880 Msa1206450:intron 30.0%
GGTTTCCATTATGAAAGATT+AGG + chr8_1:63519075-63519094 None:intergenic 30.0%
!!! TTTTTTTCTCTAAAGAGCTG+AGG + chr8_1:63519102-63519121 None:intergenic 30.0%
! ACGGCTGAAATTAAAACTTT+TGG + chr8_1:63519246-63519265 None:intergenic 30.0%
!!! AAAGTTTTAATTTCAGCCGT+TGG - chr8_1:63519246-63519265 Msa1206450:intron 30.0%
GATTAGATTACAACTTTGTG+AGG + chr8_1:63519291-63519310 None:intergenic 30.0%
ACAAAGCATGAACAGTTATT+TGG + chr8_1:63519417-63519436 None:intergenic 30.0%
!!! TTTTGAAGTTGTTAGAGTTC+TGG + chr8_1:63519471-63519490 None:intergenic 30.0%
AATAAGCATATGAATCAACC+TGG + chr8_1:63519769-63519788 None:intergenic 30.0%
TCAAATACCACAATAATAGC+AGG + chr8_1:63519830-63519849 None:intergenic 30.0%
TTATTGTGGTATTTGAACGA+AGG - chr8_1:63519834-63519853 Msa1206450:intron 30.0%
TATAAATCATAAAAGGGTGG+AGG + chr8_1:63519873-63519892 None:intergenic 30.0%
TGTACTTTGTAAAACGTTCA+AGG - chr8_1:63520024-63520043 Msa1206450:intron 30.0%
AGTAATGTAAATAACCTGTC+AGG - chr8_1:63520094-63520113 Msa1206450:CDS 30.0%
TTTATCCGTCGAATTAACTA+GGG + chr8_1:63520151-63520170 None:intergenic 30.0%
GGTACATTATTCCTATATTC+TGG - chr8_1:63520197-63520216 Msa1206450:intron 30.0%
CATTATTCCTATATTCTGGA+AGG - chr8_1:63520201-63520220 Msa1206450:intron 30.0%
ACCATTAACACTGATAATAG+TGG + chr8_1:63520312-63520331 None:intergenic 30.0%
!! AAGCAATTCTGAAATGCTTT+GGG - chr8_1:63520340-63520359 Msa1206450:intron 30.0%
!!! ATTAGAATGCCCCATTTTTT+AGG - chr8_1:63520552-63520571 Msa1206450:intron 30.0%
TGAGTATACGCCTAAAAAAT+GGG + chr8_1:63520565-63520584 None:intergenic 30.0%
TTGAGTATACGCCTAAAAAA+TGG + chr8_1:63520566-63520585 None:intergenic 30.0%
! AATCTAGCTTACCAATAAGA+GGG + chr8_1:63520637-63520656 None:intergenic 30.0%
CTTGAGTTTATGAGAGATTT+GGG + chr8_1:63520786-63520805 None:intergenic 30.0%
TTAACATTAAGAAACTCTCC+AGG + chr8_1:63520916-63520935 None:intergenic 30.0%
TGGAGAGTTTCTTAATGTTA+AGG - chr8_1:63520915-63520934 Msa1206450:intron 30.0%
!!! CAGTATTTTTTTGTAAGGTC+AGG + chr8_1:63521115-63521134 None:intergenic 30.0%
CTGACCTTACAAAAAAATAC+TGG - chr8_1:63521113-63521132 Msa1206450:intron 30.0%
TCCAAAATAGTGACATTCTT+TGG - chr8_1:63521154-63521173 Msa1206450:intron 30.0%
! ACCAAAGAATGTCACTATTT+TGG + chr8_1:63521158-63521177 None:intergenic 30.0%
TATATTGGGCTTAATGTGAA+CGG - chr8_1:63521259-63521278 Msa1206450:intron 30.0%
AATGGTCTGACTAATAAGAA+TGG + chr8_1:63521301-63521320 None:intergenic 30.0%
TTTAGTGTGTCTAACCTAAT+GGG + chr8_1:63521752-63521771 None:intergenic 30.0%
! TTTTAGTGTGTCTAACCTAA+TGG + chr8_1:63521372-63521391 None:intergenic 30.0%
ATGGATTCTTCAACTATTCA+AGG - chr8_1:63521458-63521477 Msa1206450:intron 30.0%
ATGGATTCTTCAACTATTCA+AGG + chr8_1:63521458-63521477 None:intergenic 30.0%
TTTAGTGTGTCTAACCTAAT+GGG - chr8_1:63521752-63521771 Msa1206450:intron 30.0%
!! AATGGGTTGACTAATAAGAA+CGG - chr8_1:63521818-63521837 Msa1206450:intron 30.0%
ATAGACTTACATACTAGTTG+TGG + chr8_1:63522184-63522203 None:intergenic 30.0%
TAGTATGTAAGTCTATATGC+AGG - chr8_1:63522188-63522207 Msa1206450:intron 30.0%
AGTATGTAAGTCTATATGCA+GGG - chr8_1:63522189-63522208 Msa1206450:intron 30.0%
GATACCCATGACAAAATATA+GGG + chr8_1:63522277-63522296 None:intergenic 30.0%
TGATACCCATGACAAAATAT+AGG + chr8_1:63522278-63522297 None:intergenic 30.0%
! TTTTTATGTGAATAGGTACC+CGG - chr8_1:63522341-63522360 Msa1206450:intron 30.0%
TGTTAGATAAATGTCACGAA+TGG - chr8_1:63522651-63522670 Msa1206450:intron 30.0%
! TTATTAGCTCTCATATGGTT+AGG - chr8_1:63522734-63522753 Msa1206450:CDS 30.0%
ATGCATTGAATCTCATCATA+TGG - chr8_1:63522776-63522795 Msa1206450:CDS 30.0%
TGTATAAACAAAAGGGAAAG+TGG - chr8_1:63522875-63522894 Msa1206450:intron 30.0%
AATCAAAGGTTCAAAGCTAA+AGG + chr8_1:63523095-63523114 None:intergenic 30.0%
!! AATAGCAATCGTTTTGGACA+TGG + chr8_1:63514638-63514657 None:intergenic 35.0%
! CCAAACAATAGCAATCGTTT+TGG + chr8_1:63514644-63514663 None:intergenic 35.0%
! CCAAAACGATTGCTATTGTT+TGG - chr8_1:63514641-63514660 Msa1206450:three_prime_UTR 35.0%
ATGCCTTGGCAAAATACTAT+AGG + chr8_1:63514667-63514686 None:intergenic 35.0%
ATAGCTTCGATTAGTAACGA+AGG + chr8_1:63514801-63514820 None:intergenic 35.0%
! TCTTTTCTTCAGGGTTGTTT+AGG - chr8_1:63514864-63514883 Msa1206450:intron 35.0%
AGGGTTGTTTAGGTATTCAT+TGG - chr8_1:63514874-63514893 Msa1206450:intron 35.0%
! TTACTTTGGAGATTAAGAGG+AGG + chr8_1:63514992-63515011 None:intergenic 35.0%
TCCTCTTAATCTCCAAAGTA+AGG - chr8_1:63514991-63515010 Msa1206450:three_prime_UTR 35.0%
CCTCTTAATCTCCAAAGTAA+GGG - chr8_1:63514992-63515011 Msa1206450:three_prime_UTR 35.0%
CAAAGATGTTACCCTTACTT+TGG + chr8_1:63515006-63515025 None:intergenic 35.0%
TTGACGAGTCTAGTACATTA+AGG + chr8_1:63515175-63515194 None:intergenic 35.0%
!! GAACTTAATCAAGTTGGTAG+AGG + chr8_1:63515298-63515317 None:intergenic 35.0%
CTATCAGTTTGAGTGTTTGA+CGG - chr8_1:63515413-63515432 Msa1206450:intron 35.0%
TATCAGTTTGAGTGTTTGAC+GGG - chr8_1:63515414-63515433 Msa1206450:intron 35.0%
GGATGGGATTAAGTCTTTAT+TGG - chr8_1:63515562-63515581 Msa1206450:intron 35.0%
TGGGATTAAGTCTTTATTGG+AGG - chr8_1:63515565-63515584 Msa1206450:intron 35.0%
GATTAAGTCTTTATTGGAGG+TGG - chr8_1:63515568-63515587 Msa1206450:intron 35.0%
CATCCAAGAAACAATCTTCA+GGG + chr8_1:63515645-63515664 None:intergenic 35.0%
TCATCCAAGAAACAATCTTC+AGG + chr8_1:63515646-63515665 None:intergenic 35.0%
!! TTGTATGTTGCTGGTTTATG+TGG - chr8_1:63515682-63515701 Msa1206450:intron 35.0%
!!! GTTTCAAGTTTCAGTTTTGC+TGG - chr8_1:63515714-63515733 Msa1206450:intron 35.0%
CCAATCAAAACATCACCAAA+AGG + chr8_1:63515799-63515818 None:intergenic 35.0%
!!! CCTTTTGGTGATGTTTTGAT+TGG - chr8_1:63515796-63515815 Msa1206450:intron 35.0%
!!! TTGGTGATGTTTTGATTGGT+TGG - chr8_1:63515800-63515819 Msa1206450:intron 35.0%
!!! ATGTTTTGATTGGTTGGTCA+GGG - chr8_1:63515806-63515825 Msa1206450:intron 35.0%
!! CGAAACCAGAAAAAGTATTG+AGG - chr8_1:63515830-63515849 Msa1206450:intron 35.0%
! TACTCTCTCATACCTTTTGT+AGG + chr8_1:63515963-63515982 None:intergenic 35.0%
TAATCACACGTGTTTCAGTT+TGG - chr8_1:63516065-63516084 Msa1206450:intron 35.0%
! GTGATGCATTTTCATAAAGC+TGG - chr8_1:63516411-63516430 Msa1206450:intron 35.0%
! TGGTAGTGCTACATCTTTAA+AGG - chr8_1:63516464-63516483 Msa1206450:intron 35.0%
GGTAGTGCTACATCTTTAAA+GGG - chr8_1:63516465-63516484 Msa1206450:intron 35.0%
!!! GCCCCATTTTAATTATAGCT+AGG - chr8_1:63516496-63516515 Msa1206450:intron 35.0%
CTTGTCAGCATTACAACAAA+AGG - chr8_1:63516850-63516869 Msa1206450:intron 35.0%
! TGTTTTCATGATGATAGAGG+GGG - chr8_1:63516885-63516904 Msa1206450:intron 35.0%
ATGCATATATAGCTAGACGT+AGG - chr8_1:63516959-63516978 Msa1206450:CDS 35.0%
CACACACATACACATATAAC+TGG - chr8_1:63517026-63517045 Msa1206450:intron 35.0%
GAGATTGGTGAAACTCAATA+AGG - chr8_1:63517069-63517088 Msa1206450:intron 35.0%
ATAAGGAATGCCATCTTCTA+TGG - chr8_1:63517086-63517105 Msa1206450:intron 35.0%
GAAGTTCACAACTTCATCTA+GGG + chr8_1:63517128-63517147 None:intergenic 35.0%
TGAAGTTCACAACTTCATCT+AGG + chr8_1:63517129-63517148 None:intergenic 35.0%
ACTGAAAGAATTGAACCAAG+TGG - chr8_1:63517178-63517197 Msa1206450:intron 35.0%
!! TTTTGTTTGTCAGATTTGCC+TGG - chr8_1:63517392-63517411 Msa1206450:intron 35.0%
TCACCAGAAAGTCATGTTTA+TGG - chr8_1:63517455-63517474 Msa1206450:intron 35.0%
TTCCTGTGTGGTAACTTTAT+TGG - chr8_1:63517542-63517561 Msa1206450:CDS 35.0%
!! TGTGGTAACTTTATTGGCTT+TGG - chr8_1:63517548-63517567 Msa1206450:CDS 35.0%
TTCGTGATGAAACTTTGCTT+CGG - chr8_1:63517691-63517710 Msa1206450:intron 35.0%
TTTGATCTAATGTGTTGCAG+AGG + chr8_1:63517858-63517877 None:intergenic 35.0%
ATAGTCAATGTCAGAAAACC+AGG - chr8_1:63517938-63517957 Msa1206450:CDS 35.0%
TTAGAGGTCGTAGTAATATC+GGG - chr8_1:63518174-63518193 Msa1206450:intron 35.0%
TTAAAGTTCGTAACTGCAAC+TGG - chr8_1:63518302-63518321 Msa1206450:intron 35.0%
AAAACTAGTATCAGACTGAC+AGG + chr8_1:63518657-63518676 None:intergenic 35.0%
!! TGTCAGTCTGATACTAGTTT+TGG - chr8_1:63518656-63518675 Msa1206450:intron 35.0%
!!! GTCAGTCTGATACTAGTTTT+GGG - chr8_1:63518657-63518676 Msa1206450:intron 35.0%
!!! TCAGTCTGATACTAGTTTTG+GGG - chr8_1:63518658-63518677 Msa1206450:intron 35.0%
TGATCATGATGTCAGTATTG+AGG - chr8_1:63518915-63518934 Msa1206450:intron 35.0%
TGGATTATTGGACTCATTGA+TGG - chr8_1:63518993-63519012 Msa1206450:intron 35.0%
TCGAGCCTAATCTTTCATAA+TGG - chr8_1:63519067-63519086 Msa1206450:intron 35.0%
!!! TGAGGCAAGTAGTCATTTTT+GGG + chr8_1:63519149-63519168 None:intergenic 35.0%
!! TTGAGGCAAGTAGTCATTTT+TGG + chr8_1:63519150-63519169 None:intergenic 35.0%
!!! TTTTAATTTCAGCCGTTGGA+GGG - chr8_1:63519250-63519269 Msa1206450:intron 35.0%
ATCTAATCTAATGGCCTACA+TGG - chr8_1:63519328-63519347 Msa1206450:CDS 35.0%
! TTACACACAGTTTTCCATGT+AGG + chr8_1:63519345-63519364 None:intergenic 35.0%
TTGCATGCATGTATCTTGAA+TGG + chr8_1:63519686-63519705 None:intergenic 35.0%
TATGCCATGTTATCAATTCC+AGG - chr8_1:63519748-63519767 Msa1206450:intron 35.0%
! TCAACCTGGAATTGATAACA+TGG + chr8_1:63519755-63519774 None:intergenic 35.0%
TCTCATTCTGATGAATGATC+AGG + chr8_1:63519918-63519937 None:intergenic 35.0%
TTATCCGTCGAATTAACTAG+GGG + chr8_1:63520150-63520169 None:intergenic 35.0%
GTTTATCCGTCGAATTAACT+AGG + chr8_1:63520152-63520171 None:intergenic 35.0%
CATAATGCCTTCCAGAATAT+AGG + chr8_1:63520211-63520230 None:intergenic 35.0%
GCCACTATTATCAGTGTTAA+TGG - chr8_1:63520308-63520327 Msa1206450:intron 35.0%
!! GAAGCAATTCTGAAATGCTT+TGG - chr8_1:63520339-63520358 Msa1206450:intron 35.0%
GAGTATACGCCTAAAAAATG+GGG + chr8_1:63520564-63520583 None:intergenic 35.0%
! ATCTAGCTTACCAATAAGAG+GGG + chr8_1:63520636-63520655 None:intergenic 35.0%
! CAATCTAGCTTACCAATAAG+AGG + chr8_1:63520638-63520657 None:intergenic 35.0%
! ATCTGATGATGCATACAGAA+AGG + chr8_1:63520703-63520722 None:intergenic 35.0%
AAAGCTACTTCCAATGTCTT+TGG - chr8_1:63520735-63520754 Msa1206450:intron 35.0%
AAGTCATATGCCAAAGACAT+TGG + chr8_1:63520748-63520767 None:intergenic 35.0%
CCTTGAGTTTATGAGAGATT+TGG + chr8_1:63520787-63520806 None:intergenic 35.0%
CCAAATCTCTCATAAACTCA+AGG - chr8_1:63520784-63520803 Msa1206450:intron 35.0%
AAATCCATTATCTGCAAGCA+TGG + chr8_1:63520889-63520908 None:intergenic 35.0%
! ACAAACCATGCTGGTTATAA+TGG + chr8_1:63521036-63521055 None:intergenic 35.0%
TTTATCGTTTGGGTGATAGT+TGG - chr8_1:63521077-63521096 Msa1206450:intron 35.0%
!!! CAGGCCAGTATTTTTTTGTA+AGG + chr8_1:63521120-63521139 None:intergenic 35.0%
TATTAGTCAGACCATTTGAG+AGG - chr8_1:63521305-63521324 Msa1206450:intron 35.0%
GATTATATACTCATCAGTGG+AGG + chr8_1:63521782-63521801 None:intergenic 35.0%
CATAGAGACTTGAGAGAATT+AGG + chr8_1:63521681-63521700 None:intergenic 35.0%
CTAATTCTCTCAAGTCTCTA+TGG - chr8_1:63521439-63521458 Msa1206450:intron 35.0%
CTATTCAAGGTACACGATTA+TGG - chr8_1:63521471-63521490 Msa1206450:intron 35.0%
CTTCAACTATTCAAGGTACA+CGG + chr8_1:63521465-63521484 None:intergenic 35.0%
CTAATTCTCTCAAGTCTCTA+TGG + chr8_1:63521439-63521458 None:intergenic 35.0%
GTTTAGTGTGTCTAACCTAA+TGG - chr8_1:63521751-63521770 Msa1206450:intron 35.0%
GATTATATACTCATCAGTGG+AGG - chr8_1:63521782-63521801 Msa1206450:intron 35.0%
TATTAGTCAACCCATTTGAG+AGG + chr8_1:63521814-63521833 None:intergenic 35.0%
TATATTGGGCTTACTGTGAA+CGG + chr8_1:63521860-63521879 None:intergenic 35.0%
!!! AGAGAAATTTTAGTTTGCCG+CGG - chr8_1:63521975-63521994 Msa1206450:intron 35.0%
!!! TTGAGCTTTTGGGTTGAATA+TGG - chr8_1:63522046-63522065 Msa1206450:intron 35.0%
!!! TGAGCTTTTGGGTTGAATAT+GGG - chr8_1:63522047-63522066 Msa1206450:intron 35.0%
!! TTTGGGTTGAATATGGGATT+TGG - chr8_1:63522053-63522072 Msa1206450:intron 35.0%
!! TTGGGTTGAATATGGGATTT+GGG - chr8_1:63522054-63522073 Msa1206450:intron 35.0%
ACAAACATTCATACTTGACC+AGG + chr8_1:63522121-63522140 None:intergenic 35.0%
GTATGAATGTTTGTGCATCT+TGG - chr8_1:63522127-63522146 Msa1206450:intron 35.0%
! CTAGCCCTATATTTTGTCAT+GGG - chr8_1:63522270-63522289 Msa1206450:intron 35.0%
CCATATCATCTTGCAACAAA+CGG - chr8_1:63522516-63522535 Msa1206450:intron 35.0%
!! AACAAACGGACTAATACATG+TGG - chr8_1:63522530-63522549 Msa1206450:intron 35.0%
GAGATTCAATGCATTAGTGT+TGG + chr8_1:63522770-63522789 None:intergenic 35.0%
AGAAAATGGGTCAGATATTC+CGG - chr8_1:63523014-63523033 Msa1206450:exon 35.0%
CAAAGCTAAAGGCAATTCAA+TGG + chr8_1:63523084-63523103 None:intergenic 35.0%
! TGGCCTATAGTATTTTGCCA+AGG - chr8_1:63514661-63514680 Msa1206450:three_prime_UTR 40.0%
TATTCATTGGCGCAAGAAGA+AGG - chr8_1:63514887-63514906 Msa1206450:intron 40.0%
ATTCATTGGCGCAAGAAGAA+GGG - chr8_1:63514888-63514907 Msa1206450:intron 40.0%
! CCCTTACTTTGGAGATTAAG+AGG + chr8_1:63514995-63515014 None:intergenic 40.0%
TACCACCAAATGATTACCCT+TGG - chr8_1:63515390-63515409 Msa1206450:intron 40.0%
GATAGCCAAGGGTAATCATT+TGG + chr8_1:63515398-63515417 None:intergenic 40.0%
ACACTCAAACTGATAGCCAA+GGG + chr8_1:63515409-63515428 None:intergenic 40.0%
AACACTCAAACTGATAGCCA+AGG + chr8_1:63515410-63515429 None:intergenic 40.0%
ATCAGTTTGAGTGTTTGACG+GGG - chr8_1:63515415-63515434 Msa1206450:intron 40.0%
! TCAAAATAAGAGCATGGAGG+TGG - chr8_1:63515529-63515548 Msa1206450:intron 40.0%
! GTCCCTGTCTGTTTTATGAA+TGG - chr8_1:63515611-63515630 Msa1206450:intron 40.0%
! GTACCCTGAAGATTGTTTCT+TGG - chr8_1:63515639-63515658 Msa1206450:intron 40.0%
TTTCTGCTGTTGTATGTTGC+TGG - chr8_1:63515673-63515692 Msa1206450:intron 40.0%
!!! GTTGCTGGTTTATGTGGTTT+TGG - chr8_1:63515688-63515707 Msa1206450:intron 40.0%
! AAGTTTCAGTTTTGCTGGTC+TGG - chr8_1:63515719-63515738 Msa1206450:intron 40.0%
!!! GATGTTTTGATTGGTTGGTC+AGG - chr8_1:63515805-63515824 Msa1206450:intron 40.0%
!! ACCAGAAAAAGTATTGAGGG+TGG - chr8_1:63515834-63515853 Msa1206450:intron 40.0%
!! AGAAAAAGTATTGAGGGTGG+CGG - chr8_1:63515837-63515856 Msa1206450:intron 40.0%
TGGCAATGTGACAATGCTTA+GGG - chr8_1:63515995-63516014 Msa1206450:intron 40.0%
! ACAATGCTTAGGGATTTTCG+TGG - chr8_1:63516005-63516024 Msa1206450:intron 40.0%
! GCATTTTCATAAAGCTGGGT+TGG - chr8_1:63516416-63516435 Msa1206450:intron 40.0%
! AGTGCTACATCTTTAAAGGG+TGG - chr8_1:63516468-63516487 Msa1206450:intron 40.0%
!!! GTGTTTTGGGAGTTCTGTTT+GGG - chr8_1:63516535-63516554 Msa1206450:intron 40.0%
!!! TGTTTTGGGAGTTCTGTTTG+GGG - chr8_1:63516536-63516555 Msa1206450:intron 40.0%
GAAGCCAAAACAAACAGACA+CGG + chr8_1:63516607-63516626 None:intergenic 40.0%
!!! GCTTTTGCCTTGGTTTTGTT+CGG - chr8_1:63516638-63516657 Msa1206450:CDS 40.0%
TTTATTAACGCGCTATACCC+CGG + chr8_1:63516717-63516736 None:intergenic 40.0%
! GTTTTCATGATGATAGAGGG+GGG - chr8_1:63516886-63516905 Msa1206450:intron 40.0%
ATAACTGGACATTTCCTAGC+AGG - chr8_1:63517041-63517060 Msa1206450:intron 40.0%
TTGAGTTTCACCAATCTCAC+AGG + chr8_1:63517067-63517086 None:intergenic 40.0%
! GTATTGAACTGACTCTAACG+TGG - chr8_1:63517369-63517388 Msa1206450:intron 40.0%
AGAGTTACCAATCAGGCAAT+GGG + chr8_1:63517481-63517500 None:intergenic 40.0%
AAGAGTTACCAATCAGGCAA+TGG + chr8_1:63517482-63517501 None:intergenic 40.0%
TGTTTAATCCTCTTCCTGTG+TGG - chr8_1:63517530-63517549 Msa1206450:CDS 40.0%
TAAAGTTACCACACAGGAAG+AGG + chr8_1:63517541-63517560 None:intergenic 40.0%
AGCCAATAAAGTTACCACAC+AGG + chr8_1:63517547-63517566 None:intergenic 40.0%
!! GTAACTTTATTGGCTTTGGC+AGG - chr8_1:63517552-63517571 Msa1206450:CDS 40.0%
CTTTGGCAGGATCAATACAT+CGG - chr8_1:63517565-63517584 Msa1206450:CDS 40.0%
TTTGGCAGGATCAATACATC+GGG - chr8_1:63517566-63517585 Msa1206450:CDS 40.0%
ATAAAGTGTGAGCCCATTTC+AGG + chr8_1:63517608-63517627 None:intergenic 40.0%
ATGTACCTAGCAAAGCTGAA+AGG - chr8_1:63517629-63517648 Msa1206450:intron 40.0%
TCAAACCTTTCAGCTTTGCT+AGG + chr8_1:63517637-63517656 None:intergenic 40.0%
! CATGATTTGTGCGTTACATC+TGG - chr8_1:63518040-63518059 Msa1206450:intron 40.0%
TTATGTTACCAGACAGAGAG+TGG + chr8_1:63518093-63518112 None:intergenic 40.0%
! CAAGTTAAGGGAAAGTGTGA+AGG + chr8_1:63518230-63518249 None:intergenic 40.0%
TGTCGACGTATGCAAGTTAA+GGG + chr8_1:63518242-63518261 None:intergenic 40.0%
ATGTCGACGTATGCAAGTTA+AGG + chr8_1:63518243-63518262 None:intergenic 40.0%
! GTAACTGCAACTGGTTTAGT+TGG - chr8_1:63518311-63518330 Msa1206450:intron 40.0%
AAACCTCTCTACATCATGCA+GGG + chr8_1:63518392-63518411 None:intergenic 40.0%
AAAACCTCTCTACATCATGC+AGG + chr8_1:63518393-63518412 None:intergenic 40.0%
AGATTCATCTTTGTGCTCCA+CGG - chr8_1:63518549-63518568 Msa1206450:intron 40.0%
CTTCTCATTAAGCACTTCAC+TGG - chr8_1:63518888-63518907 Msa1206450:intron 40.0%
TATTGAGGTCGAACATAGCA+CGG - chr8_1:63518930-63518949 Msa1206450:intron 40.0%
! GTCCATGATCTGTGGATTAT+TGG - chr8_1:63518981-63519000 Msa1206450:intron 40.0%
GTCCAATAATCCACAGATCA+TGG + chr8_1:63518986-63519005 None:intergenic 40.0%
CTTACACCAATTATTGCTCC+TGG + chr8_1:63519023-63519042 None:intergenic 40.0%
GTACAGATAGGAGTAGATTG+AGG + chr8_1:63519167-63519186 None:intergenic 40.0%
!!! GTTTTAATTTCAGCCGTTGG+AGG - chr8_1:63519249-63519268 Msa1206450:intron 40.0%
TACAACTTTGTGAGGTCTTG+TGG + chr8_1:63519283-63519302 None:intergenic 40.0%
GCATGAACAGTTATTTGGCA+TGG + chr8_1:63519412-63519431 None:intergenic 40.0%
TAAGCCCAATGCAAATGACA+CGG + chr8_1:63519523-63519542 None:intergenic 40.0%
TGATGAATGATCAGGTCACA+GGG + chr8_1:63519910-63519929 None:intergenic 40.0%
TACATTACTCATGTGACTGC+TGG + chr8_1:63520083-63520102 None:intergenic 40.0%
!! TTCTGAAATGCTTTGGGTTC+AGG - chr8_1:63520346-63520365 Msa1206450:intron 40.0%
! TCTGAAATGCTTTGGGTTCA+GGG - chr8_1:63520347-63520366 Msa1206450:intron 40.0%
AAGTCAAGTCACTCTACGAT+AGG - chr8_1:63520505-63520524 Msa1206450:intron 40.0%
! TAGACGGACTTTGACAAAGT+AGG + chr8_1:63520811-63520830 None:intergenic 40.0%
TGTACCATGCTTGCAGATAA+TGG - chr8_1:63520882-63520901 Msa1206450:intron 40.0%
!!! CAGATAATGGATTTTCAGCC+TGG - chr8_1:63520895-63520914 Msa1206450:intron 40.0%
!! CATGGTTTGTTGCTATTGGA+AGG - chr8_1:63521046-63521065 Msa1206450:intron 40.0%
! TTGTTGCTATTGGAAGGAGA+AGG - chr8_1:63521052-63521071 Msa1206450:intron 40.0%
!! AGGAGAAGGCATTTATCGTT+TGG - chr8_1:63521066-63521085 Msa1206450:intron 40.0%
!! GGAGAAGGCATTTATCGTTT+GGG - chr8_1:63521067-63521086 Msa1206450:intron 40.0%
AAGAATGGTTCAACCCATCA+CGG + chr8_1:63521286-63521305 None:intergenic 40.0%
CTATTCAAGGTACACGGTTA+TGG + chr8_1:63521651-63521670 None:intergenic 40.0%
TGCGTTTACCTAATGAGTAC+TGG - chr8_1:63522244-63522263 Msa1206450:intron 40.0%
CCATGACAAAATATAGGGCT+AGG + chr8_1:63522272-63522291 None:intergenic 40.0%
! CCTAGCCCTATATTTTGTCA+TGG - chr8_1:63522269-63522288 Msa1206450:intron 40.0%
TTGACGTAGCTTACCATTGT+GGG + chr8_1:63522404-63522423 None:intergenic 40.0%
TTTGACGTAGCTTACCATTG+TGG + chr8_1:63522405-63522424 None:intergenic 40.0%
CTTGTATGCTCAAATTAGCG+GGG + chr8_1:63522454-63522473 None:intergenic 40.0%
CCTTGTATGCTCAAATTAGC+GGG + chr8_1:63522455-63522474 None:intergenic 40.0%
GCCTTGTATGCTCAAATTAG+CGG + chr8_1:63522456-63522475 None:intergenic 40.0%
! CCGTTTGTTGCAAGATGATA+TGG + chr8_1:63522519-63522538 None:intergenic 40.0%
TTGTACAGAAGATACCGTGT+CGG + chr8_1:63522590-63522609 None:intergenic 40.0%
ATCTGTGTGAAATGAGCCAA+GGG + chr8_1:63522846-63522865 None:intergenic 40.0%
AATCTGTGTGAAATGAGCCA+AGG + chr8_1:63522847-63522866 None:intergenic 40.0%
GAAAATGGGTCAGATATTCC+GGG - chr8_1:63523015-63523034 Msa1206450:exon 40.0%
AAGGTTCAATTCGCATGCCT+TGG + chr8_1:63514681-63514700 None:intergenic 45.0%
ATGACTCATGAGTCACGGAA+AGG + chr8_1:63514700-63514719 None:intergenic 45.0%
TGACGATGACTCATGAGTCA+CGG + chr8_1:63514705-63514724 None:intergenic 45.0%
CAGTGTCCACTCTCAAAATG+CGG - chr8_1:63514730-63514749 Msa1206450:intron 45.0%
!! GATAGTCCGCATTTTGAGAG+TGG + chr8_1:63514739-63514758 None:intergenic 45.0%
! AAGAGATAGTACCGGAAACG+AGG + chr8_1:63514773-63514792 None:intergenic 45.0%
AGGTGGAGAAGAGATAGTAC+CGG + chr8_1:63514781-63514800 None:intergenic 45.0%
GCTTCGATTAGTAACGAAGG+TGG + chr8_1:63514798-63514817 None:intergenic 45.0%
AATTCTTCGCTGAGCACAGA+AGG + chr8_1:63514926-63514945 None:intergenic 45.0%
GAGATTAAGAGGAGGTAGAG+TGG + chr8_1:63514984-63515003 None:intergenic 45.0%
AGCCAAGGGTAATCATTTGG+TGG + chr8_1:63515395-63515414 None:intergenic 45.0%
TCAACAATTTGGGCGTGACT+TGG - chr8_1:63515483-63515502 Msa1206450:intron 45.0%
AGGTGGATGAGATAGAGGAT+GGG - chr8_1:63515546-63515565 Msa1206450:intron 45.0%
!!! CTGGTTTATGTGGTTTTGGC+TGG - chr8_1:63515692-63515711 Msa1206450:intron 45.0%
GGTGATTGTCTTGTGCACTT+TGG - chr8_1:63515759-63515778 Msa1206450:intron 45.0%
!! GATCTGCTGTTCTAGCCTTT+TGG - chr8_1:63515781-63515800 Msa1206450:intron 45.0%
!!! GCCACCCTCAATACTTTTTC+TGG + chr8_1:63515838-63515857 None:intergenic 45.0%
AGAGAGTAAACCTTGCAGTG+TGG - chr8_1:63515975-63515994 Msa1206450:intron 45.0%
GTGGCAATGTGACAATGCTT+AGG - chr8_1:63515994-63516013 Msa1206450:intron 45.0%
! GCTACATCTTTAAAGGGTGG+CGG - chr8_1:63516471-63516490 Msa1206450:intron 45.0%
!!! GGTGTTTTGGGAGTTCTGTT+TGG - chr8_1:63516534-63516553 Msa1206450:intron 45.0%
GACACAACCGAACAAAACCA+AGG + chr8_1:63516648-63516667 None:intergenic 45.0%
TCACAACTTCATCTAGGGAG+TGG + chr8_1:63517123-63517142 None:intergenic 45.0%
CAGTGTCACATTTCACCACT+TGG + chr8_1:63517196-63517215 None:intergenic 45.0%
GGGCCATAAACATGACTTTC+TGG + chr8_1:63517461-63517480 None:intergenic 45.0%
TTTATGGCCCATTGCCTGAT+TGG - chr8_1:63517471-63517490 Msa1206450:intron 45.0%
TTGGCAGGATCAATACATCG+GGG - chr8_1:63517567-63517586 Msa1206450:CDS 45.0%
GATGAAACTTTGCTTCGGCA+AGG - chr8_1:63517696-63517715 Msa1206450:intron 45.0%
CGACTGTGAATGATGAAACC+TGG + chr8_1:63517959-63517978 None:intergenic 45.0%
! AAGTGTGAAGGTGTGATTGG+AGG + chr8_1:63518218-63518237 None:intergenic 45.0%
! GGAAAGTGTGAAGGTGTGAT+TGG + chr8_1:63518221-63518240 None:intergenic 45.0%
AACCTCTCTACATCATGCAG+GGG + chr8_1:63518391-63518410 None:intergenic 45.0%
AGCGTCATGGAAATGGAACT+GGG + chr8_1:63518458-63518477 None:intergenic 45.0%
TGGTGTGAGCCATATACTGA+AGG - chr8_1:63518596-63518615 Msa1206450:intron 45.0%
TGAGAAGCAGACCTACTTGT+GGG + chr8_1:63518875-63518894 None:intergenic 45.0%
ATGAGAAGCAGACCTACTTG+TGG + chr8_1:63518876-63518895 None:intergenic 45.0%
CACAGATCATGGACTTTCCA+TGG + chr8_1:63518975-63518994 None:intergenic 45.0%
CATGGAAAGTCCATGATCTG+TGG - chr8_1:63518973-63518992 Msa1206450:intron 45.0%
GGAACACCAGGAGCAATAAT+TGG - chr8_1:63519014-63519033 Msa1206450:intron 45.0%
CCTAATCTACTTGCCGGAAA+CGG - chr8_1:63519201-63519220 Msa1206450:intron 45.0%
AACTGCACCAAATCCGTTTC+CGG + chr8_1:63519217-63519236 None:intergenic 45.0%
! TTTTCAACAGCAGCAGATCC+TGG - chr8_1:63519374-63519393 Msa1206450:intron 45.0%
TTTCAACAGCAGCAGATCCT+GGG - chr8_1:63519375-63519394 Msa1206450:intron 45.0%
!! AAGTCCCGTGTCATTTGCAT+TGG - chr8_1:63519515-63519534 Msa1206450:intron 45.0%
!! AGTCCCGTGTCATTTGCATT+GGG - chr8_1:63519516-63519535 Msa1206450:intron 45.0%
AAGCCCAATGCAAATGACAC+GGG + chr8_1:63519522-63519541 None:intergenic 45.0%
TGACGCTCCTGCTATTATTG+TGG - chr8_1:63519820-63519839 Msa1206450:intron 45.0%
CTGATGAATGATCAGGTCAC+AGG + chr8_1:63519911-63519930 None:intergenic 45.0%
TCGAATTAACTAGGGGCTCT+GGG + chr8_1:63520143-63520162 None:intergenic 45.0%
AGAGCCCCTAGTTAATTCGA+CGG - chr8_1:63520143-63520162 Msa1206450:intron 45.0%
TAGGAATAATGTACCTCCCC+TGG + chr8_1:63520192-63520211 None:intergenic 45.0%
TTACCAATAAGAGGGGAGGA+GGG + chr8_1:63520629-63520648 None:intergenic 45.0%
TAGCTTACCAATAAGAGGGG+AGG + chr8_1:63520633-63520652 None:intergenic 45.0%
! TTGTACGTTGTGGCTTTTGC+AGG - chr8_1:63521006-63521025 Msa1206450:intron 45.0%
GAGGTCCATTATAACCAGCA+TGG - chr8_1:63521028-63521047 Msa1206450:intron 45.0%
CCAATAGCAACAAACCATGC+TGG + chr8_1:63521045-63521064 None:intergenic 45.0%
!! CCAGCATGGTTTGTTGCTAT+TGG - chr8_1:63521042-63521061 Msa1206450:intron 45.0%
TTGGATTCTCTGCAACACTC+AGG + chr8_1:63521139-63521158 None:intergenic 45.0%
TTAATGTGAACGGACCGTGA+TGG - chr8_1:63521269-63521288 Msa1206450:intron 45.0%
TAATGTGAACGGACCGTGAT+GGG - chr8_1:63521270-63521289 Msa1206450:intron 45.0%
ATATACTCATCAGTGGAGGC+AGG + chr8_1:63521786-63521805 None:intergenic 45.0%
AGAAGAACGCTCCATCAGTA+AGG - chr8_1:63521394-63521413 Msa1206450:intron 45.0%
ATATACTCATCAGTGGAGGC+AGG - chr8_1:63521786-63521805 Msa1206450:intron 45.0%
TATACTCATCAGTGGAGGCA+GGG - chr8_1:63521787-63521806 Msa1206450:intron 45.0%
AAGAACGGTACAACCCATCA+CGG - chr8_1:63521833-63521852 Msa1206450:intron 45.0%
!!! GAAATTTTAGTTTGCCGCGG+AGG - chr8_1:63521978-63521997 Msa1206450:intron 45.0%
AAGTCTATATGCAGGGTCTC+TGG - chr8_1:63522196-63522215 Msa1206450:intron 45.0%
GGGTCTCTGGCTAATATTTC+AGG - chr8_1:63522209-63522228 Msa1206450:intron 45.0%
GCTAGGTACCAGTACTCATT+AGG + chr8_1:63522255-63522274 None:intergenic 45.0%
TCAAATTAGCGGGGAACTGA+AGG + chr8_1:63522445-63522464 None:intergenic 45.0%
CCCGCTAATTTGAGCATACA+AGG - chr8_1:63522452-63522471 Msa1206450:intron 45.0%
!! ATACATGTGGTGCTGTCTTC+AGG - chr8_1:63522543-63522562 Msa1206450:intron 45.0%
CTCAGATAAATTGGGACGGA+GGG + chr8_1:63522823-63522842 None:intergenic 45.0%
AGGGCTCAGATAAATTGGGA+CGG + chr8_1:63522827-63522846 None:intergenic 45.0%
TCCCAATTTATCTGAGCCCT+TGG - chr8_1:63522827-63522846 Msa1206450:CDS 45.0%
GCCAAGGGCTCAGATAAATT+GGG + chr8_1:63522831-63522850 None:intergenic 45.0%
AGCCAAGGGCTCAGATAAAT+TGG + chr8_1:63522832-63522851 None:intergenic 45.0%
!!! TTAATGTTATTTATTTATAT+TGG - chr8_1:63521244-63521263 Msa1206450:intron 5.0%
!!! TAATGTTATTTATTTATATT+GGG - chr8_1:63521245-63521264 Msa1206450:intron 5.0%
!! CGCATTTTGAGAGTGGACAC+TGG + chr8_1:63514732-63514751 None:intergenic 50.0%
TTCCTCCTTCTCCTCGTTTC+CGG - chr8_1:63514759-63514778 Msa1206450:intron 50.0%
! TAGTACCGGAAACGAGGAGA+AGG + chr8_1:63514767-63514786 None:intergenic 50.0%
! CAATTTGGGCGTGACTTGGA+AGG - chr8_1:63515487-63515506 Msa1206450:intron 50.0%
CATGGAGGTGGATGAGATAG+AGG - chr8_1:63515541-63515560 Msa1206450:intron 50.0%
GAGGTGGATGAGATAGAGGA+TGG - chr8_1:63515545-63515564 Msa1206450:intron 50.0%
ATTGGAGGTGGAGTTTGAGC+CGG - chr8_1:63515580-63515599 Msa1206450:intron 50.0%
GTGGAGTTTGAGCCGGTTAA+AGG - chr8_1:63515587-63515606 Msa1206450:intron 50.0%
CAGACAGGGACACCTTTAAC+CGG + chr8_1:63515602-63515621 None:intergenic 50.0%
!! TTCAGTTTTGCTGGTCTGGC+TGG - chr8_1:63515723-63515742 Msa1206450:intron 50.0%
! TGGTCTGGCTGGAGCTTTTT+CGG - chr8_1:63515734-63515753 Msa1206450:intron 50.0%
TGTCACATTGCCACACTGCA+AGG + chr8_1:63515988-63516007 None:intergenic 50.0%
ATTATAGCTAGGTCCGTCCC+TGG - chr8_1:63516507-63516526 Msa1206450:intron 50.0%
CAAAACACCAGAACCAGGGA+CGG + chr8_1:63516523-63516542 None:intergenic 50.0%
!!! GTCCCTGGTTCTGGTGTTTT+GGG - chr8_1:63516522-63516541 Msa1206450:intron 50.0%
CTCCCAAAACACCAGAACCA+GGG + chr8_1:63516527-63516546 None:intergenic 50.0%
ACTCCCAAAACACCAGAACC+AGG + chr8_1:63516528-63516547 None:intergenic 50.0%
! GCTGCCGTGTCTGTTTGTTT+TGG - chr8_1:63516600-63516619 Msa1206450:intron 50.0%
!! GCTGCGTTTTGCTTTTGCCT+TGG - chr8_1:63516628-63516647 Msa1206450:intron 50.0%
TAGACACTGCGTGTGAATCC+AGG + chr8_1:63517413-63517432 None:intergenic 50.0%
TGGCAGGATCAATACATCGG+GGG - chr8_1:63517568-63517587 Msa1206450:CDS 50.0%
GAAACTTTGCTTCGGCAAGG+TGG - chr8_1:63517699-63517718 Msa1206450:intron 50.0%
TCTTGTAGCCACTCTCTGTC+TGG - chr8_1:63518082-63518101 Msa1206450:intron 50.0%
TTCCCCTGCATGATGTAGAG+AGG - chr8_1:63518386-63518405 Msa1206450:intron 50.0%
GAGCGTCATGGAAATGGAAC+TGG + chr8_1:63518459-63518478 None:intergenic 50.0%
! GGTTTGGAGCGTCATGGAAA+TGG + chr8_1:63518465-63518484 None:intergenic 50.0%
! GTCAATGGTTTGGAGCGTCA+TGG + chr8_1:63518471-63518490 None:intergenic 50.0%
CATGGATAGAGACCAGTAGC+TGG + chr8_1:63518957-63518976 None:intergenic 50.0%
! CAGCTACTGGTCTCTATCCA+TGG - chr8_1:63518955-63518974 Msa1206450:intron 50.0%
GGACTCATTGATGGAACACC+AGG - chr8_1:63519002-63519021 Msa1206450:intron 50.0%
! TCTCTAAAGAGCTGAGGCTC+TGG + chr8_1:63519096-63519115 None:intergenic 50.0%
GTGCAGCGTGTTGTACAGAT+AGG + chr8_1:63519179-63519198 None:intergenic 50.0%
GCACGACCTAATCTACTTGC+CGG - chr8_1:63519195-63519214 Msa1206450:intron 50.0%
CCGTTTCCGGCAAGTAGATT+AGG + chr8_1:63519204-63519223 None:intergenic 50.0%
! CTACTTGCCGGAAACGGATT+TGG - chr8_1:63519207-63519226 Msa1206450:intron 50.0%
TGTGGCACAAATCCCTCCAA+CGG + chr8_1:63519265-63519284 None:intergenic 50.0%
CAGTTATTTGGCATGGACCG+TGG + chr8_1:63519405-63519424 None:intergenic 50.0%
GGCAGATAAGCATACCTGAC+AGG + chr8_1:63520111-63520130 None:intergenic 50.0%
GTCGAATTAACTAGGGGCTC+TGG + chr8_1:63520144-63520163 None:intergenic 50.0%
AGCCACTCGTTGAAACTCCA+GGG - chr8_1:63520172-63520191 Msa1206450:intron 50.0%
CTTACCAATAAGAGGGGAGG+AGG + chr8_1:63520630-63520649 None:intergenic 50.0%
! TACGTTGTGGCTTTTGCAGG+AGG - chr8_1:63521009-63521028 Msa1206450:intron 50.0%
AGAACGCTCCATCAGTAAGG+CGG - chr8_1:63521397-63521416 Msa1206450:intron 50.0%
AGAAGAACGCTCCATCAGTG+AGG + chr8_1:63521731-63521750 None:intergenic 50.0%
TACTGTGAACGGACCGTGAT+GGG + chr8_1:63521849-63521868 None:intergenic 50.0%
TTACTGTGAACGGACCGTGA+TGG + chr8_1:63521850-63521869 None:intergenic 50.0%
TTAGGCGCATTGAACTTGCC+TGG - chr8_1:63522100-63522119 Msa1206450:intron 50.0%
TGTGAATAGGTACCCGGTTC+AGG - chr8_1:63522347-63522366 Msa1206450:intron 50.0%
TTCAGGCGGGTGATGTCATT+TGG - chr8_1:63522364-63522383 Msa1206450:intron 50.0%
GCTTACCATTGTGGGACGAA+TGG + chr8_1:63522396-63522415 None:intergenic 50.0%
AATTAGCGGGGAACTGAAGG+AGG + chr8_1:63522442-63522461 None:intergenic 50.0%
GCTCAGATAAATTGGGACGG+AGG + chr8_1:63522824-63522843 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG - chr8_1:63523019-63523038 Msa1206450:five_prime_UTR 50.0%
TACCGGAAACGAGGAGAAGG+AGG + chr8_1:63514764-63514783 None:intergenic 55.0%
!! GGTCTGGCTGGAGCTTTTTC+GGG - chr8_1:63515735-63515754 Msa1206450:intron 55.0%
!!! CGTCCCTGGTTCTGGTGTTT+TGG - chr8_1:63516521-63516540 Msa1206450:intron 55.0%
TATACCCCGGTCAAGGTGGA+CGG + chr8_1:63516704-63516723 None:intergenic 55.0%
TCCTAGCAGGCCTGTGAGAT+TGG - chr8_1:63517054-63517073 Msa1206450:intron 55.0%
ACCAATCTCACAGGCCTGCT+AGG + chr8_1:63517058-63517077 None:intergenic 55.0%
TGGTGACTCTGACAACACCG+TGG + chr8_1:63518569-63518588 None:intergenic 55.0%
GTCAGAGTCACCAGTGCTCA+TGG - chr8_1:63518576-63518595 Msa1206450:intron 55.0%
ATGGCTCACACCATGAGCAC+TGG + chr8_1:63518589-63518608 None:intergenic 55.0%
ACATAGCACGGACCAGCTAC+TGG - chr8_1:63518942-63518961 Msa1206450:intron 55.0%
!! AGGGGCTCTGGGACATGATT+TGG + chr8_1:63520132-63520151 None:intergenic 55.0%
CAGCCACTCGTTGAAACTCC+AGG - chr8_1:63520171-63520190 Msa1206450:intron 55.0%
GCCACTCGTTGAAACTCCAG+GGG - chr8_1:63520173-63520192 Msa1206450:intron 55.0%
TCCCCTGGAGTTTCAACGAG+TGG + chr8_1:63520177-63520196 None:intergenic 55.0%
ACTCGTTGAAACTCCAGGGG+AGG - chr8_1:63520176-63520195 Msa1206450:intron 55.0%
TCTCCCTCCTCCCCTCTTAT+TGG - chr8_1:63520623-63520642 Msa1206450:intron 55.0%
TGCTTCAGCCGCCTTACTGA+TGG + chr8_1:63521408-63521427 None:intergenic 55.0%
AGAACGCTCCATCAGTGAGG+CGG + chr8_1:63521728-63521747 None:intergenic 55.0%
GAGGCAGGGACCTCTCAAAT+GGG - chr8_1:63521801-63521820 Msa1206450:intron 55.0%
TATCAGTCGCATCACCTCCG+CGG + chr8_1:63521995-63522014 None:intergenic 55.0%
GAATAGGTACCCGGTTCAGG+CGG - chr8_1:63522350-63522369 Msa1206450:intron 55.0%
AATAGGTACCCGGTTCAGGC+GGG - chr8_1:63522351-63522370 Msa1206450:intron 55.0%
ATGACATCACCCGCCTGAAC+CGG + chr8_1:63522363-63522382 None:intergenic 55.0%
! GGCGGGTGATGTCATTTGGA+TGG - chr8_1:63522368-63522387 Msa1206450:intron 55.0%
TGTCTTCAGGTACGCTGCAC+TGG - chr8_1:63522556-63522575 Msa1206450:intron 55.0%
GTCTTCAGGTACGCTGCACT+GGG - chr8_1:63522557-63522576 Msa1206450:intron 55.0%
TCTTCAGGTACGCTGCACTG+GGG - chr8_1:63522558-63522577 Msa1206450:intron 55.0%
CACTGGGGAAAACTCCGACA+CGG - chr8_1:63522573-63522592 Msa1206450:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG - chr8_1:63523023-63523042 Msa1206450:five_prime_UTR 55.0%
TGAAGTTACTCCCTCCGTCC+CGG + chr8_1:63523036-63523055 None:intergenic 55.0%
!!! CTGGCTGGAGCTTTTTCGGG+TGG - chr8_1:63515738-63515757 Msa1206450:intron 60.0%
CTTGTCCCGTCCACCTTGAC+CGG - chr8_1:63516695-63516714 Msa1206450:intron 60.0%
TTGTCCCGTCCACCTTGACC+GGG - chr8_1:63516696-63516715 Msa1206450:intron 60.0%
ATACCCCGGTCAAGGTGGAC+GGG + chr8_1:63516703-63516722 None:intergenic 60.0%
AACGCGCTATACCCCGGTCA+AGG + chr8_1:63516711-63516730 None:intergenic 60.0%
AGCAGATCCTGGGCGTTCCA+CGG - chr8_1:63519385-63519404 Msa1206450:intron 60.0%
GCAGGCAGGGACCTCTCAAA+TGG + chr8_1:63521319-63521338 None:intergenic 60.0%
CTCATCAGTGGAGGCAGGCA+GGG + chr8_1:63521332-63521351 None:intergenic 60.0%
ACTCATCAGTGGAGGCAGGC+AGG + chr8_1:63521333-63521352 None:intergenic 60.0%
TTCTGCCACCGCCTCACTGA+TGG - chr8_1:63521717-63521736 Msa1206450:intron 60.0%
GGAGGCAGGGACCTCTCAAA+TGG - chr8_1:63521800-63521819 Msa1206450:intron 60.0%
TGACATCACCCGCCTGAACC+GGG + chr8_1:63522362-63522381 None:intergenic 60.0%
TGGCGCCATTCGTCCCACAA+TGG - chr8_1:63522388-63522407 Msa1206450:intron 60.0%
AGCGGGGAACTGAAGGAGGA+GGG + chr8_1:63522438-63522457 None:intergenic 60.0%
TAGCGGGGAACTGAAGGAGG+AGG + chr8_1:63522439-63522458 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG - chr8_1:63523022-63523041 Msa1206450:five_prime_UTR 60.0%
GCTAGGTCCGTCCCTGGTTC+TGG - chr8_1:63516513-63516532 Msa1206450:intron 65.0%
CGGTCAAGGTGGACGGGACA+AGG + chr8_1:63516697-63516716 None:intergenic 65.0%
TGTCCCGTCCACCTTGACCG+GGG - chr8_1:63516697-63516716 Msa1206450:intron 65.0%
GCGCTATACCCCGGTCAAGG+TGG + chr8_1:63516708-63516727 None:intergenic 65.0%
ACGCTCCATCAGTGAGGCGG+TGG + chr8_1:63521725-63521744 None:intergenic 65.0%
GCATGGACCGTGGAACGCCC+AGG + chr8_1:63519395-63519414 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 63514609 63523118 63514609 ID=Msa1206450;Name=Msa1206450
chr8_1 mRNA 63514609 63523118 63514609 ID=Msa1206450-mRNA-1;Parent=Msa1206450;Name=Msa1206450-mRNA-1;_AED=0.25;_eAED=0.25;_QI=102|1|1|1|0.92|0.85|14|254|310
chr8_1 exon 63514609 63514683 63514609 ID=Msa1206450-mRNA-1:exon:20679;Parent=Msa1206450-mRNA-1
chr8_1 exon 63514914 63515162 63514914 ID=Msa1206450-mRNA-1:exon:20678;Parent=Msa1206450-mRNA-1
chr8_1 exon 63515318 63515371 63515318 ID=Msa1206450-mRNA-1:exon:20677;Parent=Msa1206450-mRNA-1
chr8_1 exon 63516629 63516699 63516629 ID=Msa1206450-mRNA-1:exon:20676;Parent=Msa1206450-mRNA-1
chr8_1 exon 63516791 63516829 63516791 ID=Msa1206450-mRNA-1:exon:20675;Parent=Msa1206450-mRNA-1
chr8_1 exon 63516950 63517006 63516950 ID=Msa1206450-mRNA-1:exon:20674;Parent=Msa1206450-mRNA-1
chr8_1 exon 63517530 63517611 63517530 ID=Msa1206450-mRNA-1:exon:20673;Parent=Msa1206450-mRNA-1
chr8_1 exon 63517872 63517957 63517872 ID=Msa1206450-mRNA-1:exon:20672;Parent=Msa1206450-mRNA-1
chr8_1 exon 63519110 63519176 63519110 ID=Msa1206450-mRNA-1:exon:20671;Parent=Msa1206450-mRNA-1
chr8_1 exon 63519320 63519359 63519320 ID=Msa1206450-mRNA-1:exon:20670;Parent=Msa1206450-mRNA-1
chr8_1 exon 63520077 63520153 63520077 ID=Msa1206450-mRNA-1:exon:20669;Parent=Msa1206450-mRNA-1
chr8_1 exon 63520235 63520322 63520235 ID=Msa1206450-mRNA-1:exon:20668;Parent=Msa1206450-mRNA-1
chr8_1 exon 63522720 63522851 63522720 ID=Msa1206450-mRNA-1:exon:20667;Parent=Msa1206450-mRNA-1
chr8_1 exon 63522947 63523118 63522947 ID=Msa1206450-mRNA-1:exon:20666;Parent=Msa1206450-mRNA-1
chr8_1 five_prime_UTR 63523017 63523118 63523017 ID=Msa1206450-mRNA-1:five_prime_utr;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63522947 63523016 63522947 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63522720 63522851 63522720 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63520235 63520322 63520235 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63520077 63520153 63520077 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63519320 63519359 63519320 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63519110 63519176 63519110 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63517872 63517957 63517872 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63517530 63517611 63517530 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63516950 63517006 63516950 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63516791 63516829 63516791 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63516629 63516699 63516629 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63515318 63515371 63515318 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 CDS 63515093 63515162 63515093 ID=Msa1206450-mRNA-1:cds;Parent=Msa1206450-mRNA-1
chr8_1 three_prime_UTR 63514914 63515092 63514914 ID=Msa1206450-mRNA-1:three_prime_utr;Parent=Msa1206450-mRNA-1
chr8_1 three_prime_UTR 63514609 63514683 63514609 ID=Msa1206450-mRNA-1:three_prime_utr;Parent=Msa1206450-mRNA-1
Gene Sequence

>Msa1206450

ATGAGTCATCGTCACTATCCAGTGTCCACTCTCAAAATGCGGACTATCTTCCTCCTTCTCCTCGTTTCCGGGTTGTTTAGGTATTCATTGGCGCAAGAAGAAGGGTTTTGCTCTGCACCTTCTGTGCTCAGCGAAGAATTAAAATCGAAACCTCTTTATTCCAAAATTTATGACTCCACTCTACCTCCTCTTAATCTCCAAAATTTGCCTGGATTCACACGCAGTGTCTATAAGAGAGATCATGCTTTGATATCACCAGAAAGTCATGTTTATGGCCCATTGCCTGATTGGATCAATACATCGGGGGCATTTTTAATTTCACCTGAAATGGGCTCACACTTTATAATGTACCTAGCAAAGCTGAAAGAAAATTCAAGATCAGGACTTCCCCTGCATGATGTAGAGAGATTCATCTTTGTGCTCCACGGTGTTGTCAGAGTCACCAGTGCTCATGGTGTGAGCCATATACTGAAGGTTGATTCATATGCTTATTTTCCTCCAAATTTTGAACATTCAATTGAATCTGACGCTCCTGCTATTATTGTGGTATTTGAACGAAGGTATGCTTATCTGCCAAATCATGTCCCAGAGCCCCTAGTTAATTCGACGGATAAACAGCCACTCGTTGAAACTCCAGGGGAGATTTTTGAACTGCGAAAGCTACTTCCAATGTCTTTGGCATATGACTTCAATATACATATAATGGATTTTCAGCCTGGAGAGTTTCTTAATGTTAAGGAGGTCCATTATAACCAGCATGGTTTGTTGCTATTGGAAGGAGAAGGCATTTATCGTTTGGGTGATAGTTGGTACCCGGTTCAGGCGGGTGATGTCATTTGGATGGCGCCATTCGTCCCACAATGGTACGCTGCACTGGGGAAAACTCCGACACGGTATCTTCTGTACAAAGACGTGAACAGAAGCCCATTATAA

Protein sequence

>Msa1206450

MSHRHYPVSTLKMRTIFLLLLVSGLFRYSLAQEEGFCSAPSVLSEELKSKPLYSKIYDSTLPPLNLQNLPGFTRSVYKRDHALISPESHVYGPLPDWINTSGAFLISPEMGSHFIMYLAKLKENSRSGLPLHDVERFIFVLHGVVRVTSAHGVSHILKVDSYAYFPPNFEHSIESDAPAIIVVFERRYAYLPNHVPEPLVNSTDKQPLVETPGEIFELRKLLPMSLAYDFNIHIMDFQPGEFLNVKEVHYNQHGLLLLEGEGIYRLGDSWYPVQAGDVIWMAPFVPQWYAALGKTPTRYLLYKDVNRSPL*