Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295460 | XP_013464712.1 | 91.329 | 173 | 15 | 0 | 1 | 173 | 1 | 173 | 6.22e-112 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295460 | sp|Q9SEU6|TRXM4_ARATH | 60.510 | 157 | 58 | 2 | 21 | 173 | 35 | 191 | 1.40e-63 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295460 | I3SA84 | 91.329 | 173 | 15 | 0 | 1 | 173 | 1 | 173 | 2.97e-112 | 325 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010110 | Msa0295460 | -0.818003 | 2.458390e-52 | -8.615850e-47 |
| Msa0010490 | Msa0295460 | -0.827919 | 1.199174e-54 | -8.615850e-47 |
| Msa0010500 | Msa0295460 | -0.810399 | 1.175164e-50 | -8.615850e-47 |
| Msa0020390 | Msa0295460 | -0.813152 | 2.958415e-51 | -8.615850e-47 |
| Msa0020410 | Msa0295460 | -0.801473 | 8.856236e-49 | -8.615850e-47 |
| Msa0026710 | Msa0295460 | -0.817690 | 2.893502e-52 | -8.615850e-47 |
| Msa0028930 | Msa0295460 | -0.806636 | 7.472949e-50 | -8.615850e-47 |
| Msa0029240 | Msa0295460 | -0.801069 | 1.071197e-48 | -8.615850e-47 |
| Msa0035130 | Msa0295460 | -0.832730 | 7.999818e-56 | -8.615850e-47 |
| Msa0036540 | Msa0295460 | -0.831287 | 1.818404e-55 | -8.615850e-47 |
| Msa0044090 | Msa0295460 | -0.801795 | 7.605341e-49 | -8.615850e-47 |
| Msa0046110 | Msa0295460 | 0.825870 | 3.702663e-54 | -8.615850e-47 |
| Msa0054920 | Msa0295460 | -0.819666 | 1.030197e-52 | -8.615850e-47 |
| Msa0059040 | Msa0295460 | -0.809403 | 1.925554e-50 | -8.615850e-47 |
| Msa0059110 | Msa0295460 | -0.825941 | 3.562584e-54 | -8.615850e-47 |
| Msa0059840 | Msa0295460 | -0.802217 | 6.228764e-49 | -8.615850e-47 |
| Msa0063530 | Msa0295460 | -0.822192 | 2.701123e-53 | -8.615850e-47 |
| Msa0070700 | Msa0295460 | -0.820244 | 7.600159e-53 | -8.615850e-47 |
| Msa0071250 | Msa0295460 | -0.859465 | 4.060223e-63 | -8.615850e-47 |
| Msa0072420 | Msa0295460 | -0.801147 | 1.032835e-48 | -8.615850e-47 |
| Msa0078640 | Msa0295460 | -0.807369 | 5.226556e-50 | -8.615850e-47 |
| Msa0090550 | Msa0295460 | -0.817678 | 2.910670e-52 | -8.615850e-47 |
| Msa0090570 | Msa0295460 | -0.818598 | 1.803164e-52 | -8.615850e-47 |
| Msa0092410 | Msa0295460 | -0.808071 | 3.707615e-50 | -8.615850e-47 |
| Msa0098290 | Msa0295460 | -0.803597 | 3.231926e-49 | -8.615850e-47 |
| Msa0106620 | Msa0295460 | -0.854937 | 8.823419e-62 | -8.615850e-47 |
| Msa0106710 | Msa0295460 | -0.871038 | 9.264390e-67 | -8.615850e-47 |
| Msa0108410 | Msa0295460 | -0.808571 | 2.900587e-50 | -8.615850e-47 |
| Msa0115130 | Msa0295460 | -0.816920 | 4.312855e-52 | -8.615850e-47 |
| Msa0115400 | Msa0295460 | -0.844151 | 9.028552e-59 | -8.615850e-47 |
| Msa0117520 | Msa0295460 | -0.833200 | 6.113400e-56 | -8.615850e-47 |
| Msa0118590 | Msa0295460 | -0.810927 | 9.035910e-51 | -8.615850e-47 |
| Msa0120880 | Msa0295460 | -0.813990 | 1.934975e-51 | -8.615850e-47 |
| Msa0124450 | Msa0295460 | -0.831148 | 1.966718e-55 | -8.615850e-47 |
| Msa0125650 | Msa0295460 | -0.810983 | 8.787860e-51 | -8.615850e-47 |
| Msa0127100 | Msa0295460 | -0.815918 | 7.227507e-52 | -8.615850e-47 |
| Msa0127780 | Msa0295460 | -0.825666 | 4.139734e-54 | -8.615850e-47 |
| Msa0138020 | Msa0295460 | -0.804346 | 2.257783e-49 | -8.615850e-47 |
| Msa0139670 | Msa0295460 | -0.828312 | 9.641447e-55 | -8.615850e-47 |
| Msa0140500 | Msa0295460 | 0.810277 | 1.248860e-50 | -8.615850e-47 |
| Msa0140770 | Msa0295460 | 0.804448 | 2.149924e-49 | -8.615850e-47 |
| Msa0144370 | Msa0295460 | -0.806087 | 9.754123e-50 | -8.615850e-47 |
| Msa0144530 | Msa0295460 | -0.856528 | 3.027004e-62 | -8.615850e-47 |
| Msa0148080 | Msa0295460 | -0.832224 | 1.067973e-55 | -8.615850e-47 |
| Msa0150860 | Msa0295460 | -0.811826 | 5.765609e-51 | -8.615850e-47 |
| Msa0152560 | Msa0295460 | -0.811016 | 8.645336e-51 | -8.615850e-47 |
| Msa0160960 | Msa0295460 | -0.837218 | 5.918453e-57 | -8.615850e-47 |
| Msa0171280 | Msa0295460 | -0.815564 | 8.666683e-52 | -8.615850e-47 |
| Msa0173800 | Msa0295460 | -0.805353 | 1.390478e-49 | -8.615850e-47 |
| Msa0179190 | Msa0295460 | -0.832573 | 8.752712e-56 | -8.615850e-47 |
| Msa0183760 | Msa0295460 | -0.821626 | 3.654050e-53 | -8.615850e-47 |
| Msa0183850 | Msa0295460 | -0.822260 | 2.604746e-53 | -8.615850e-47 |
| Msa0189040 | Msa0295460 | -0.811956 | 5.402332e-51 | -8.615850e-47 |
| Msa0189300 | Msa0295460 | -0.810036 | 1.407472e-50 | -8.615850e-47 |
| Msa0190310 | Msa0295460 | -0.815133 | 1.080566e-51 | -8.615850e-47 |
| Msa0202410 | Msa0295460 | -0.819646 | 1.041304e-52 | -8.615850e-47 |
| Msa0204960 | Msa0295460 | -0.834724 | 2.540059e-56 | -8.615850e-47 |
| Msa0205010 | Msa0295460 | -0.816913 | 4.328149e-52 | -8.615850e-47 |
| Msa0206830 | Msa0295460 | -0.834567 | 2.782028e-56 | -8.615850e-47 |
| Msa0217700 | Msa0295460 | -0.822710 | 2.048167e-53 | -8.615850e-47 |
| Msa0220400 | Msa0295460 | 0.824163 | 9.364743e-54 | -8.615850e-47 |
| Msa0220730 | Msa0295460 | -0.835349 | 1.767516e-56 | -8.615850e-47 |
| Msa0223330 | Msa0295460 | -0.816012 | 6.885023e-52 | -8.615850e-47 |
| Msa0223340 | Msa0295460 | -0.818291 | 2.116778e-52 | -8.615850e-47 |
| Msa0232020 | Msa0295460 | -0.814037 | 1.888754e-51 | -8.615850e-47 |
| Msa0233370 | Msa0295460 | -0.822813 | 1.937482e-53 | -8.615850e-47 |
| Msa0237210 | Msa0295460 | -0.814294 | 1.657494e-51 | -8.615850e-47 |
| Msa0240900 | Msa0295460 | -0.843881 | 1.066310e-58 | -8.615850e-47 |
| Msa0241140 | Msa0295460 | -0.832491 | 9.171472e-56 | -8.615850e-47 |
| Msa0249580 | Msa0295460 | -0.804517 | 2.079352e-49 | -8.615850e-47 |
| Msa0257490 | Msa0295460 | -0.811155 | 8.066304e-51 | -8.615850e-47 |
| Msa0259800 | Msa0295460 | -0.814685 | 1.358581e-51 | -8.615850e-47 |
| Msa0267370 | Msa0295460 | -0.824240 | 8.983551e-54 | -8.615850e-47 |
| Msa0267790 | Msa0295460 | -0.806209 | 9.190764e-50 | -8.615850e-47 |
| Msa0269560 | Msa0295460 | -0.810103 | 1.361391e-50 | -8.615850e-47 |
| Msa0278580 | Msa0295460 | -0.814105 | 1.825278e-51 | -8.615850e-47 |
| Msa0281530 | Msa0295460 | -0.836568 | 8.671873e-57 | -8.615850e-47 |
| Msa0283420 | Msa0295460 | -0.803280 | 3.758157e-49 | -8.615850e-47 |
| Msa0288080 | Msa0295460 | -0.827500 | 1.511997e-54 | -8.615850e-47 |
| Msa0295460 | Msa0296050 | 0.835830 | 1.335449e-56 | -8.615850e-47 |
| Msa0295460 | Msa0296820 | -0.814435 | 1.542666e-51 | -8.615850e-47 |
| Msa0295460 | Msa0297610 | -0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0295460 | Msa0305410 | -0.847815 | 9.108790e-60 | -8.615850e-47 |
| Msa0295460 | Msa0310440 | -0.809118 | 2.216061e-50 | -8.615850e-47 |
| Msa0295460 | Msa0315690 | -0.832230 | 1.064149e-55 | -8.615850e-47 |
| Msa0295460 | Msa0317960 | -0.806077 | 9.799874e-50 | -8.615850e-47 |
| Msa0295460 | Msa0317970 | -0.865236 | 6.838013e-65 | -8.615850e-47 |
| Msa0295460 | Msa0321690 | -0.827831 | 1.258915e-54 | -8.615850e-47 |
| Msa0295460 | Msa0322240 | -0.814053 | 1.874309e-51 | -8.615850e-47 |
| Msa0295460 | Msa0322900 | -0.800128 | 1.666592e-48 | -8.615850e-47 |
| Msa0295460 | Msa0326480 | -0.842199 | 2.991994e-58 | -8.615850e-47 |
| Msa0295460 | Msa0333850 | 0.802987 | 4.321990e-49 | -8.615850e-47 |
| Msa0295460 | Msa0333970 | 0.844509 | 7.236062e-59 | -8.615850e-47 |
| Msa0295460 | Msa0335730 | -0.829863 | 4.057609e-55 | -8.615850e-47 |
| Msa0295460 | Msa0337710 | -0.834195 | 3.448273e-56 | -8.615850e-47 |
| Msa0295460 | Msa0340380 | -0.817073 | 3.983996e-52 | -8.615850e-47 |
| Msa0295460 | Msa0341840 | -0.802326 | 5.916970e-49 | -8.615850e-47 |
| Msa0295460 | Msa0357900 | -0.876621 | 1.207064e-68 | -8.615850e-47 |
| Msa0295460 | Msa0363790 | -0.803283 | 3.753647e-49 | -8.615850e-47 |
| Msa0295460 | Msa0378970 | -0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa0295460 | Msa0381610 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0295460 | Msa0382370 | -0.820299 | 7.379764e-53 | -8.615850e-47 |
| Msa0295460 | Msa0385500 | -0.800409 | 1.461067e-48 | -8.615850e-47 |
| Msa0295460 | Msa0389210 | -0.833192 | 6.139839e-56 | -8.615850e-47 |
| Msa0295460 | Msa0389910 | -0.819223 | 1.300361e-52 | -8.615850e-47 |
| Msa0295460 | Msa0393370 | -0.802607 | 5.178672e-49 | -8.615850e-47 |
| Msa0295460 | Msa0403640 | -0.811494 | 6.806910e-51 | -8.615850e-47 |
| Msa0295460 | Msa0403770 | -0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa0295460 | Msa0411430 | -0.855030 | 8.290583e-62 | -8.615850e-47 |
| Msa0295460 | Msa0419720 | -0.804016 | 2.644547e-49 | -8.615850e-47 |
| Msa0295460 | Msa0427580 | -0.801959 | 7.038661e-49 | -8.615850e-47 |
| Msa0295460 | Msa0432160 | -0.810226 | 1.280497e-50 | -8.615850e-47 |
| Msa0295460 | Msa0434180 | -0.813575 | 2.387507e-51 | -8.615850e-47 |
| Msa0295460 | Msa0437020 | -0.829452 | 5.107710e-55 | -8.615850e-47 |
| Msa0295460 | Msa0450400 | 0.864317 | 1.326040e-64 | -8.615850e-47 |
| Msa0295460 | Msa0450480 | -0.831344 | 1.760967e-55 | -8.615850e-47 |
| Msa0295460 | Msa0455760 | -0.814434 | 1.543656e-51 | -8.615850e-47 |
| Msa0295460 | Msa0467380 | -0.810207 | 1.292684e-50 | -8.615850e-47 |
| Msa0295460 | Msa0469620 | 0.808395 | 3.163128e-50 | -8.615850e-47 |
| Msa0295460 | Msa0474650 | 0.807078 | 6.026182e-50 | -8.615850e-47 |
| Msa0295460 | Msa0476680 | -0.822637 | 2.129485e-53 | -8.615850e-47 |
| Msa0295460 | Msa0481030 | -0.817051 | 4.028911e-52 | -8.615850e-47 |
| Msa0295460 | Msa0481280 | -0.836619 | 8.413144e-57 | -8.615850e-47 |
| Msa0295460 | Msa0481970 | -0.843707 | 1.187590e-58 | -8.615850e-47 |
| Msa0295460 | Msa0492890 | -0.815937 | 7.157690e-52 | -8.615850e-47 |
| Msa0295460 | Msa0497210 | -0.814961 | 1.179712e-51 | -8.615850e-47 |
| Msa0295460 | Msa0500470 | -0.809126 | 2.207816e-50 | -8.615850e-47 |
| Msa0295460 | Msa0510930 | -0.857826 | 1.252785e-62 | -8.615850e-47 |
| Msa0295460 | Msa0518170 | -0.831019 | 2.116405e-55 | -8.615850e-47 |
| Msa0295460 | Msa0519160 | -0.827785 | 1.291266e-54 | -8.615850e-47 |
| Msa0295460 | Msa0521010 | -0.830268 | 3.231500e-55 | -8.615850e-47 |
| Msa0295460 | Msa0521670 | -0.846188 | 2.541572e-59 | -8.615850e-47 |
| Msa0295460 | Msa0523430 | 0.813178 | 2.918590e-51 | -8.615850e-47 |
| Msa0295460 | Msa0523490 | 0.814343 | 1.616582e-51 | -8.615850e-47 |
| Msa0295460 | Msa0527020 | -0.816524 | 5.291328e-52 | -8.615850e-47 |
| Msa0295460 | Msa0529890 | -0.800756 | 1.241079e-48 | -8.615850e-47 |
| Msa0295460 | Msa0532960 | -0.826159 | 3.161322e-54 | -8.615850e-47 |
| Msa0295460 | Msa0532990 | -0.824837 | 6.499911e-54 | -8.615850e-47 |
| Msa0295460 | Msa0534870 | -0.801922 | 7.164781e-49 | -8.615850e-47 |
| Msa0295460 | Msa0542490 | -0.822225 | 2.654287e-53 | -8.615850e-47 |
| Msa0295460 | Msa0544160 | -0.800283 | 1.549934e-48 | -8.615850e-47 |
| Msa0295460 | Msa0545050 | -0.806691 | 7.275659e-50 | -8.615850e-47 |
| Msa0295460 | Msa0554290 | -0.804545 | 2.052083e-49 | -8.615850e-47 |
| Msa0295460 | Msa0554920 | -0.808090 | 3.673017e-50 | -8.615850e-47 |
| Msa0295460 | Msa0562570 | -0.806941 | 6.442203e-50 | -8.615850e-47 |
| Msa0295460 | Msa0576120 | 0.801682 | 8.023827e-49 | -8.615850e-47 |
| Msa0295460 | Msa0581280 | -0.847553 | 1.075253e-59 | -8.615850e-47 |
| Msa0295460 | Msa0583360 | 0.832331 | 1.004763e-55 | -8.615850e-47 |
| Msa0295460 | Msa0608500 | -0.802994 | 4.308467e-49 | -8.615850e-47 |
| Msa0295460 | Msa0610180 | -0.813937 | 1.987532e-51 | -8.615850e-47 |
| Msa0295460 | Msa0610840 | 0.820726 | 5.888988e-53 | -8.615850e-47 |
| Msa0295460 | Msa0616870 | 0.813515 | 2.462055e-51 | -8.615850e-47 |
| Msa0295460 | Msa0617170 | -0.829301 | 5.556736e-55 | -8.615850e-47 |
| Msa0295460 | Msa0618470 | -0.810413 | 1.167248e-50 | -8.615850e-47 |
| Msa0295460 | Msa0629240 | -0.807797 | 4.241011e-50 | -8.615850e-47 |
| Msa0295460 | Msa0648780 | -0.802168 | 6.377228e-49 | -8.615850e-47 |
| Msa0295460 | Msa0649020 | -0.802722 | 4.903336e-49 | -8.615850e-47 |
| Msa0295460 | Msa0649220 | -0.817728 | 2.837350e-52 | -8.615850e-47 |
| Msa0295460 | Msa0658590 | -0.806831 | 6.795182e-50 | -8.615850e-47 |
| Msa0295460 | Msa0664750 | -0.800513 | 1.391145e-48 | -8.615850e-47 |
| Msa0295460 | Msa0671210 | -0.800378 | 1.482530e-48 | -8.615850e-47 |
| Msa0295460 | Msa0672450 | -0.823078 | 1.680992e-53 | -8.615850e-47 |
| Msa0295460 | Msa0672550 | -0.844361 | 7.927361e-59 | -8.615850e-47 |
| Msa0295460 | Msa0673120 | -0.818634 | 1.769088e-52 | -8.615850e-47 |
| Msa0295460 | Msa0679030 | -0.836853 | 7.333599e-57 | -8.615850e-47 |
| Msa0295460 | Msa0685090 | -0.802018 | 6.844225e-49 | -8.615850e-47 |
| Msa0295460 | Msa0705990 | -0.849788 | 2.582798e-60 | -8.615850e-47 |
| Msa0295460 | Msa0707250 | -0.830654 | 2.600657e-55 | -8.615850e-47 |
| Msa0295460 | Msa0709120 | -0.827109 | 1.875447e-54 | -8.615850e-47 |
| Msa0295460 | Msa0711150 | -0.804463 | 2.133951e-49 | -8.615850e-47 |
| Msa0295460 | Msa0715700 | -0.804263 | 2.348882e-49 | -8.615850e-47 |
| Msa0295460 | Msa0731480 | -0.818179 | 2.243809e-52 | -8.615850e-47 |
| Msa0295460 | Msa0733010 | -0.806109 | 9.648629e-50 | -8.615850e-47 |
| Msa0295460 | Msa0735550 | -0.820157 | 7.957591e-53 | -8.615850e-47 |
| Msa0295460 | Msa0738440 | -0.805337 | 1.401506e-49 | -8.615850e-47 |
| Msa0295460 | Msa0741440 | -0.812102 | 5.020402e-51 | -8.615850e-47 |
| Msa0295460 | Msa0754820 | -0.822943 | 1.807246e-53 | -8.615850e-47 |
| Msa0295460 | Msa0763920 | -0.811627 | 6.369803e-51 | -8.615850e-47 |
| Msa0295460 | Msa0766760 | -0.805212 | 1.488296e-49 | -8.615850e-47 |
| Msa0295460 | Msa0796580 | 0.819875 | 9.230146e-53 | -8.615850e-47 |
| Msa0295460 | Msa0800370 | -0.838331 | 3.064198e-57 | -8.615850e-47 |
| Msa0295460 | Msa0814600 | -0.800023 | 1.750371e-48 | -8.615850e-47 |
| Msa0295460 | Msa0817650 | -0.820762 | 5.780089e-53 | -8.615850e-47 |
| Msa0295460 | Msa0822500 | -0.830541 | 2.770679e-55 | -8.615850e-47 |
| Msa0295460 | Msa0826150 | -0.824175 | 9.307512e-54 | -8.615850e-47 |
| Msa0295460 | Msa0844110 | -0.830390 | 3.016831e-55 | -8.615850e-47 |
| Msa0295460 | Msa0858130 | -0.818372 | 2.028321e-52 | -8.615850e-47 |
| Msa0295460 | Msa0860030 | 0.802355 | 5.836250e-49 | -8.615850e-47 |
| Msa0295460 | Msa0863720 | -0.828773 | 7.461508e-55 | -8.615850e-47 |
| Msa0295460 | Msa0887250 | -0.816426 | 5.564731e-52 | -8.615850e-47 |
| Msa0295460 | Msa0890550 | -0.832028 | 1.193913e-55 | -8.615850e-47 |
| Msa0295460 | Msa0892640 | -0.823793 | 1.143819e-53 | -8.615850e-47 |
| Msa0295460 | Msa0894710 | -0.832436 | 9.464809e-56 | -8.615850e-47 |
| Msa0295460 | Msa0902830 | -0.801335 | 9.454254e-49 | -8.615850e-47 |
| Msa0295460 | Msa0921420 | -0.837952 | 3.836207e-57 | -8.615850e-47 |
| Msa0295460 | Msa0923780 | -0.804300 | 2.308346e-49 | -8.615850e-47 |
| Msa0295460 | Msa0928130 | -0.808968 | 2.386092e-50 | -8.615850e-47 |
| Msa0295460 | Msa0933760 | -0.834530 | 2.841265e-56 | -8.615850e-47 |
| Msa0295460 | Msa0934140 | -0.858333 | 8.855363e-63 | -8.615850e-47 |
| Msa0295460 | Msa0936390 | -0.813905 | 2.019933e-51 | -8.615850e-47 |
| Msa0295460 | Msa0944200 | -0.812413 | 4.293806e-51 | -8.615850e-47 |
| Msa0295460 | Msa0960390 | -0.826591 | 2.493928e-54 | -8.615850e-47 |
| Msa0295460 | Msa0974950 | -0.828633 | 8.064997e-55 | -8.615850e-47 |
| Msa0295460 | Msa0975320 | -0.815370 | 9.573779e-52 | -8.615850e-47 |
| Msa0295460 | Msa0994370 | -0.804010 | 2.651650e-49 | -8.615850e-47 |
| Msa0295460 | Msa1011090 | -0.814118 | 1.812964e-51 | -8.615850e-47 |
| Msa0295460 | Msa1021520 | -0.840592 | 7.925709e-58 | -8.615850e-47 |
| Msa0295460 | Msa1024680 | -0.809407 | 1.921496e-50 | -8.615850e-47 |
| Msa0295460 | Msa1026940 | -0.808955 | 2.400872e-50 | -8.615850e-47 |
| Msa0295460 | Msa1029050 | -0.808457 | 3.068672e-50 | -8.615850e-47 |
| Msa0295460 | Msa1034270 | -0.804419 | 2.180280e-49 | -8.615850e-47 |
| Msa0295460 | Msa1034290 | -0.813198 | 2.889564e-51 | -8.615850e-47 |
| Msa0295460 | Msa1034500 | -0.825187 | 5.373190e-54 | -8.615850e-47 |
| Msa0295460 | Msa1036610 | -0.817465 | 3.252443e-52 | -8.615850e-47 |
| Msa0295460 | Msa1048220 | -0.823714 | 1.193835e-53 | -8.615850e-47 |
| Msa0295460 | Msa1051210 | -0.807814 | 4.204885e-50 | -8.615850e-47 |
| Msa0295460 | Msa1059470 | -0.801593 | 8.369949e-49 | -8.615850e-47 |
| Msa0295460 | Msa1060260 | -0.822038 | 2.932497e-53 | -8.615850e-47 |
| Msa0295460 | Msa1063420 | -0.810121 | 1.349196e-50 | -8.615850e-47 |
| Msa0295460 | Msa1064250 | -0.831956 | 1.244161e-55 | -8.615850e-47 |
| Msa0295460 | Msa1071180 | 0.800804 | 1.213475e-48 | -8.615850e-47 |
| Msa0295460 | Msa1075650 | -0.805308 | 1.421229e-49 | -8.615850e-47 |
| Msa0295460 | Msa1080640 | -0.804491 | 2.106182e-49 | -8.615850e-47 |
| Msa0295460 | Msa1089320 | -0.821622 | 3.661405e-53 | -8.615850e-47 |
| Msa0295460 | Msa1089450 | -0.847950 | 8.362190e-60 | -8.615850e-47 |
| Msa0295460 | Msa1089460 | -0.812432 | 4.251762e-51 | -8.615850e-47 |
| Msa0295460 | Msa1091940 | -0.806117 | 9.610063e-50 | -8.615850e-47 |
| Msa0295460 | Msa1093100 | -0.803619 | 3.197117e-49 | -8.615850e-47 |
| Msa0295460 | Msa1104560 | -0.803908 | 2.785321e-49 | -8.615850e-47 |
| Msa0295460 | Msa1108710 | -0.811233 | 7.756583e-51 | -8.615850e-47 |
| Msa0295460 | Msa1109680 | -0.833858 | 4.187898e-56 | -8.615850e-47 |
| Msa0295460 | Msa1111870 | -0.812668 | 3.775705e-51 | -8.615850e-47 |
| Msa0295460 | Msa1122310 | 0.804560 | 2.037276e-49 | -8.615850e-47 |
| Msa0295460 | Msa1123770 | -0.837801 | 4.195150e-57 | -8.615850e-47 |
| Msa0295460 | Msa1135890 | -0.834806 | 2.422388e-56 | -8.615850e-47 |
| Msa0295460 | Msa1143020 | -0.802657 | 5.056224e-49 | -8.615850e-47 |
| Msa0295460 | Msa1144040 | -0.842887 | 1.965516e-58 | -8.615850e-47 |
| Msa0295460 | Msa1155170 | 0.829177 | 5.954931e-55 | -8.615850e-47 |
| Msa0295460 | Msa1158390 | -0.818902 | 1.538397e-52 | -8.615850e-47 |
| Msa0295460 | Msa1162780 | -0.832944 | 7.077660e-56 | -8.615850e-47 |
| Msa0295460 | Msa1163730 | -0.831730 | 1.414643e-55 | -8.615850e-47 |
| Msa0295460 | Msa1169910 | -0.839752 | 1.313193e-57 | -8.615850e-47 |
| Msa0295460 | Msa1175200 | -0.808608 | 2.848958e-50 | -8.615850e-47 |
| Msa0295460 | Msa1176710 | -0.802896 | 4.513743e-49 | -8.615850e-47 |
| Msa0295460 | Msa1176720 | -0.808306 | 3.304188e-50 | -8.615850e-47 |
| Msa0295460 | Msa1179070 | -0.809662 | 1.693717e-50 | -8.615850e-47 |
| Msa0295460 | Msa1180500 | -0.822619 | 2.149690e-53 | -8.615850e-47 |
| Msa0295460 | Msa1181250 | -0.856064 | 4.140533e-62 | -8.615850e-47 |
| Msa0295460 | Msa1181330 | -0.856086 | 4.081173e-62 | -8.615850e-47 |
| Msa0295460 | Msa1181910 | -0.851902 | 6.558261e-61 | -8.615850e-47 |
| Msa0295460 | Msa1183140 | -0.810259 | 1.259721e-50 | -8.615850e-47 |
| Msa0295460 | Msa1196610 | 0.804730 | 1.877445e-49 | -8.615850e-47 |
| Msa0295460 | Msa1206270 | -0.831263 | 1.843207e-55 | -8.615850e-47 |
| Msa0295460 | Msa1206290 | -0.833781 | 4.378809e-56 | -8.615850e-47 |
| Msa0295460 | Msa1206400 | 0.812891 | 3.373956e-51 | -8.615850e-47 |
| Msa0295460 | Msa1206450 | 0.826454 | 2.688486e-54 | -8.615850e-47 |
| Msa0295460 | Msa1209200 | -0.836353 | 9.837659e-57 | -8.615850e-47 |
| Msa0295460 | Msa1209440 | -0.818931 | 1.515240e-52 | -8.615850e-47 |
| Msa0295460 | Msa1210110 | -0.800278 | 1.553590e-48 | -8.615850e-47 |
| Msa0295460 | Msa1218450 | -0.813809 | 2.120586e-51 | -8.615850e-47 |
| Msa0295460 | Msa1221330 | -0.826422 | 2.736445e-54 | -8.615850e-47 |
| Msa0295460 | Msa1225860 | 0.839630 | 1.412908e-57 | -8.615850e-47 |
| Msa0295460 | Msa1226270 | -0.810103 | 1.361553e-50 | -8.615850e-47 |
| Msa0295460 | Msa1226470 | -0.820903 | 5.363304e-53 | -8.615850e-47 |
| Msa0295460 | Msa1231840 | -0.834478 | 2.928036e-56 | -8.615850e-47 |
| Msa0295460 | Msa1236110 | 0.863364 | 2.624279e-64 | -8.615850e-47 |
| Msa0295460 | Msa1236160 | 0.841961 | 3.458795e-58 | -8.615850e-47 |
| Msa0295460 | Msa1245930 | -0.801363 | 9.326003e-49 | -8.615850e-47 |
| Msa0295460 | Msa1246360 | -0.812021 | 5.227696e-51 | -8.615850e-47 |
| Msa0295460 | Msa1254730 | -0.852042 | 5.981904e-61 | -8.615850e-47 |
| Msa0295460 | Msa1256810 | -0.802535 | 5.358238e-49 | -8.615850e-47 |
| Msa0295460 | Msa1259060 | -0.805851 | 1.093367e-49 | -8.615850e-47 |
| Msa0295460 | Msa1262890 | -0.802280 | 6.045533e-49 | -8.615850e-47 |
| Msa0295460 | Msa1265590 | -0.813037 | 3.134134e-51 | -8.615850e-47 |
| Msa0295460 | Msa1271130 | -0.836625 | 8.388315e-57 | -8.615850e-47 |
| Msa0295460 | Msa1274560 | -0.800801 | 1.215632e-48 | -8.615850e-47 |
| Msa0295460 | Msa1275680 | -0.825077 | 5.707195e-54 | -8.615850e-47 |
| Msa0295460 | Msa1294820 | -0.822782 | 1.970702e-53 | -8.615850e-47 |
| Msa0295460 | Msa1302850 | -0.804073 | 2.573691e-49 | -8.615850e-47 |
| Msa0295460 | Msa1305810 | -0.801233 | 9.919950e-49 | -8.615850e-47 |
| Msa0295460 | Msa1306920 | -0.802995 | 4.305493e-49 | -8.615850e-47 |
| Msa0295460 | Msa1307180 | -0.841195 | 5.505169e-58 | -8.615850e-47 |
| Msa0295460 | Msa1312520 | -0.826841 | 2.173949e-54 | -8.615850e-47 |
| Msa0295460 | Msa1316360 | -0.847751 | 9.487473e-60 | -8.615850e-47 |
| Msa0295460 | Msa1316640 | -0.805347 | 1.394835e-49 | -8.615850e-47 |
| Msa0295460 | Msa1325410 | 0.847985 | 8.177020e-60 | -8.615850e-47 |
| Msa0295460 | Msa1331050 | 0.804960 | 1.680399e-49 | -8.615850e-47 |
| Msa0295460 | Msa1332050 | -0.821933 | 3.102861e-53 | -8.615850e-47 |
| Msa0295460 | Msa1332590 | -0.838665 | 2.512603e-57 | -8.615850e-47 |
| Msa0295460 | Msa1336560 | -0.836645 | 8.289719e-57 | -8.615850e-47 |
| Msa0295460 | Msa1340200 | -0.835798 | 1.360503e-56 | -8.615850e-47 |
| Msa0295460 | Msa1345810 | -0.811148 | 8.090818e-51 | -8.615850e-47 |
| Msa0295460 | Msa1346840 | -0.825109 | 5.606432e-54 | -8.615850e-47 |
| Msa0295460 | Msa1349520 | -0.828716 | 7.700328e-55 | -8.615850e-47 |
| Msa0295460 | Msa1351540 | -0.829934 | 3.898794e-55 | -8.615850e-47 |
| Msa0295460 | Msa1352280 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
| Msa0295460 | Msa1352760 | -0.804619 | 1.980747e-49 | -8.615850e-47 |
| Msa0295460 | Msa1359400 | -0.823420 | 1.398657e-53 | -8.615850e-47 |
| Msa0295460 | Msa1364210 | -0.820558 | 6.438875e-53 | -8.615850e-47 |
| Msa0295460 | Msa1368360 | -0.850837 | 1.311481e-60 | -8.615850e-47 |
| Msa0295460 | Msa1372280 | -0.816424 | 5.569820e-52 | -8.615850e-47 |
| Msa0295460 | Msa1381480 | -0.843727 | 1.173160e-58 | -8.615850e-47 |
| Msa0295460 | Msa1385720 | -0.839162 | 1.868267e-57 | -8.615850e-47 |
| Msa0295460 | Msa1392780 | -0.812618 | 3.871353e-51 | -8.615850e-47 |
| Msa0295460 | Msa1393570 | -0.821927 | 3.112682e-53 | -8.615850e-47 |
| Msa0295460 | Msa1393840 | 0.860873 | 1.524649e-63 | -8.615850e-47 |
| Msa0295460 | Msa1395730 | -0.828621 | 8.121718e-55 | -8.615850e-47 |
| Msa0295460 | Msa1400580 | -0.814686 | 1.357676e-51 | -8.615850e-47 |
| Msa0295460 | Msa1407190 | -0.814430 | 1.546923e-51 | -8.615850e-47 |
| Msa0295460 | Msa1412130 | -0.840850 | 6.783237e-58 | -8.615850e-47 |
| Msa0295460 | Msa1413380 | -0.803546 | 3.310623e-49 | -8.615850e-47 |
| Msa0295460 | Msa1416370 | -0.832365 | 9.854417e-56 | -8.615850e-47 |
| Msa0295460 | Msa1419870 | -0.802230 | 6.192351e-49 | -8.615850e-47 |
| Msa0295460 | Msa1422810 | -0.811888 | 5.588382e-51 | -8.615850e-47 |
| Msa0295460 | Msa1425260 | -0.838838 | 2.267351e-57 | -8.615850e-47 |
| Msa0295460 | Msa1428780 | -0.800775 | 1.230328e-48 | -8.615850e-47 |
| Msa0295460 | Msa1432130 | -0.813005 | 3.186378e-51 | -8.615850e-47 |
| Msa0295460 | Msa1434090 | -0.858489 | 7.956416e-63 | -8.615850e-47 |
| Msa0295460 | Msa1435390 | -0.829874 | 4.032480e-55 | -8.615850e-47 |
| Msa0295460 | Msa1437270 | -0.831340 | 1.764739e-55 | -8.615850e-47 |
| Msa0295460 | Msa1440310 | -0.819617 | 1.057281e-52 | -8.615850e-47 |
| Msa0295460 | Msa1440930 | -0.846921 | 1.603242e-59 | -8.615850e-47 |
| Msa0295460 | Msa1445390 | 0.808638 | 2.806918e-50 | -8.615850e-47 |
| Msa0295460 | Msa1447180 | -0.829000 | 6.575401e-55 | -8.615850e-47 |
| Msa0295460 | Msa1449340 | 0.815871 | 7.402613e-52 | -8.615850e-47 |
| Msa0295460 | Msa1452710 | -0.807871 | 4.089818e-50 | -8.615850e-47 |
| Msa0295460 | Msa1454680 | -0.814136 | 1.796790e-51 | -8.615850e-47 |
| Msa0295460 | Msa1457160 | -0.837054 | 6.517420e-57 | -8.615850e-47 |
| Msa0295460 | Msa1458090 | -0.815006 | 1.153158e-51 | -8.615850e-47 |
| Msa0295460 | Msa1458770 | -0.803306 | 3.713292e-49 | -8.615850e-47 |
| Msa0295460 | Msa1462360 | -0.810687 | 1.018230e-50 | -8.615850e-47 |
| Msa0295460 | Msa1464090 | -0.805563 | 1.256441e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295460 | MtrunA17_Chr2g0317731 | 91.329 | 173 | 15 | 0 | 1 | 173 | 1 | 173 | 5.72e-116 | 325 |
| Msa0295460 | MtrunA17_Chr8g0360031 | 65.193 | 181 | 50 | 6 | 1 | 173 | 1 | 176 | 3.23e-75 | 223 |
| Msa0295460 | MtrunA17_Chr3g0125821 | 56.875 | 160 | 64 | 4 | 15 | 173 | 18 | 173 | 2.25e-61 | 187 |
| Msa0295460 | MtrunA17_Chr4g0044731 | 53.125 | 96 | 45 | 0 | 78 | 173 | 73 | 168 | 2.31e-37 | 126 |
| Msa0295460 | MtrunA17_Chr2g0317721 | 48.039 | 102 | 53 | 0 | 70 | 171 | 41 | 142 | 5.25e-33 | 114 |
| Msa0295460 | MtrunA17_Chr2g0317701 | 52.941 | 102 | 47 | 1 | 70 | 170 | 46 | 147 | 5.50e-32 | 112 |
| Msa0295460 | MtrunA17_Chr2g0317711 | 48.077 | 104 | 53 | 1 | 70 | 173 | 41 | 143 | 7.76e-28 | 101 |
| Msa0295460 | MtrunA17_Chr1g0211871 | 38.532 | 109 | 59 | 2 | 70 | 173 | 70 | 175 | 4.06e-23 | 90.5 |
| Msa0295460 | MtrunA17_Chr1g0201781 | 33.981 | 103 | 68 | 0 | 68 | 170 | 60 | 162 | 3.54e-20 | 82.4 |
| Msa0295460 | MtrunA17_Chr2g0317691 | 51.562 | 64 | 31 | 0 | 110 | 173 | 3 | 66 | 5.70e-20 | 79.7 |
| Msa0295460 | MtrunA17_Chr5g0404831 | 43.333 | 90 | 49 | 2 | 84 | 173 | 28 | 115 | 9.88e-17 | 72.0 |
| Msa0295460 | MtrunA17_Chr4g0052481 | 42.500 | 80 | 43 | 2 | 82 | 159 | 77 | 155 | 5.86e-16 | 71.6 |
| Msa0295460 | MtrunA17_Chr7g0216481 | 36.145 | 83 | 51 | 2 | 89 | 171 | 51 | 131 | 7.93e-16 | 70.1 |
| Msa0295460 | MtrunA17_Chr1g0155721 | 42.254 | 71 | 40 | 1 | 89 | 159 | 31 | 100 | 1.17e-14 | 66.6 |
| Msa0295460 | MtrunA17_Chr8g0393201 | 41.975 | 81 | 45 | 2 | 89 | 169 | 252 | 330 | 6.42e-14 | 68.2 |
| Msa0295460 | MtrunA17_Chr3g0142051 | 40.845 | 71 | 41 | 1 | 89 | 159 | 31 | 100 | 6.92e-14 | 64.7 |
| Msa0295460 | MtrunA17_Chr5g0438731 | 32.990 | 97 | 63 | 1 | 61 | 157 | 183 | 277 | 7.59e-13 | 65.5 |
| Msa0295460 | MtrunA17_Chr5g0438731 | 35.789 | 95 | 60 | 1 | 58 | 151 | 49 | 143 | 7.56e-12 | 62.8 |
| Msa0295460 | MtrunA17_Chr2g0287471 | 32.692 | 104 | 70 | 0 | 48 | 151 | 8 | 111 | 7.00e-11 | 59.7 |
| Msa0295460 | MtrunA17_Chr1g0164481 | 27.778 | 108 | 69 | 2 | 66 | 171 | 79 | 179 | 8.08e-11 | 58.2 |
| Msa0295460 | MtrunA17_Chr7g0245141 | 28.440 | 109 | 65 | 3 | 63 | 159 | 11 | 118 | 8.86e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295460 | AT3G15360.1 | 60.510 | 157 | 58 | 2 | 21 | 173 | 35 | 191 | 1.42e-64 | 197 |
| Msa0295460 | AT1G03680.1 | 53.548 | 155 | 68 | 3 | 19 | 173 | 29 | 179 | 8.50e-56 | 174 |
| Msa0295460 | AT4G03520.1 | 52.229 | 157 | 67 | 4 | 21 | 173 | 33 | 185 | 2.98e-55 | 173 |
| Msa0295460 | AT2G15570.1 | 50.450 | 111 | 52 | 1 | 63 | 173 | 64 | 171 | 1.83e-37 | 127 |
| Msa0295460 | AT2G15570.2 | 49.550 | 111 | 54 | 1 | 63 | 173 | 64 | 172 | 3.11e-37 | 126 |
| Msa0295460 | AT4G03520.2 | 63.380 | 71 | 26 | 0 | 103 | 173 | 1 | 71 | 1.62e-29 | 103 |
| Msa0295460 | AT1G76760.1 | 36.792 | 106 | 67 | 0 | 68 | 173 | 63 | 168 | 3.85e-23 | 90.5 |
| Msa0295460 | AT1G43560.1 | 34.266 | 143 | 84 | 2 | 36 | 173 | 26 | 163 | 2.63e-22 | 88.2 |
| Msa0295460 | AT1G50320.1 | 33.577 | 137 | 76 | 2 | 39 | 173 | 53 | 176 | 3.79e-21 | 85.5 |
| Msa0295460 | AT1G19730.1 | 42.105 | 76 | 44 | 0 | 84 | 159 | 26 | 101 | 4.45e-18 | 75.9 |
| Msa0295460 | AT4G12170.1 | 40.860 | 93 | 55 | 0 | 70 | 162 | 51 | 143 | 2.64e-17 | 75.1 |
| Msa0295460 | AT3G51030.1 | 44.444 | 90 | 48 | 2 | 84 | 173 | 26 | 113 | 5.27e-17 | 73.2 |
| Msa0295460 | AT5G42980.1 | 39.773 | 88 | 51 | 2 | 84 | 171 | 25 | 110 | 1.07e-16 | 72.4 |
| Msa0295460 | AT2G35010.2 | 38.824 | 85 | 49 | 2 | 77 | 159 | 97 | 180 | 9.04e-15 | 69.3 |
| Msa0295460 | AT2G35010.1 | 38.824 | 85 | 49 | 2 | 77 | 159 | 97 | 180 | 9.04e-15 | 69.3 |
| Msa0295460 | AT5G39950.1 | 36.471 | 85 | 50 | 2 | 78 | 159 | 36 | 119 | 1.74e-14 | 67.0 |
| Msa0295460 | AT1G52990.1 | 40.741 | 81 | 47 | 1 | 83 | 162 | 223 | 303 | 5.84e-14 | 68.6 |
| Msa0295460 | AT1G45145.1 | 36.842 | 76 | 47 | 1 | 84 | 159 | 25 | 99 | 1.29e-13 | 64.3 |
| Msa0295460 | AT2G32920.1 | 27.737 | 137 | 89 | 3 | 13 | 147 | 113 | 241 | 1.35e-12 | 65.1 |
| Msa0295460 | AT2G32920.1 | 36.585 | 82 | 52 | 0 | 70 | 151 | 32 | 113 | 7.07e-11 | 60.1 |
| Msa0295460 | AT1G04980.1 | 25.926 | 135 | 97 | 1 | 13 | 147 | 115 | 246 | 3.05e-12 | 64.3 |
| Msa0295460 | AT1G04980.1 | 36.585 | 82 | 52 | 0 | 70 | 151 | 34 | 115 | 4.08e-11 | 60.8 |
| Msa0295460 | AT1G31020.1 | 35.065 | 77 | 47 | 2 | 84 | 158 | 69 | 144 | 3.40e-12 | 61.6 |
| Msa0295460 | AT3G54960.1 | 33.010 | 103 | 68 | 1 | 69 | 171 | 100 | 201 | 9.04e-12 | 62.8 |
| Msa0295460 | AT3G54960.2 | 33.010 | 103 | 68 | 1 | 69 | 171 | 100 | 201 | 1.37e-11 | 62.4 |
| Msa0295460 | AT3G06730.1 | 26.946 | 167 | 108 | 6 | 1 | 156 | 1 | 164 | 1.99e-11 | 60.1 |
| Msa0295460 | AT1G69880.1 | 33.803 | 71 | 46 | 1 | 89 | 159 | 62 | 131 | 5.41e-11 | 58.2 |
| Msa0295460 | AT1G59730.1 | 33.673 | 98 | 60 | 3 | 77 | 171 | 31 | 126 | 5.64e-11 | 57.8 |
| Msa0295460 | AT4G04950.1 | 28.750 | 80 | 56 | 1 | 84 | 163 | 19 | 97 | 9.44e-11 | 59.7 |
Find 70 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTGTGTTGGTCGAATTC+TGG | 0.102485 | 2_3:+48067664 | Msa0295460:CDS |
| CTTTCTTAAATAATCGTTTA+TGG | 0.132258 | 2_3:+48068026 | Msa0295460:three_prime_UTR |
| CGATAGTCGGAGAGCGAATA+AGG | 0.195201 | 2_3:-48063793 | None:intergenic |
| CAAACTTGAGATAAGATAAT+TGG | 0.228833 | 2_3:-48067994 | None:intergenic |
| CTTCTATTACTGATGGAAAT+TGG | 0.291432 | 2_3:+48067616 | Msa0295460:CDS |
| TCCTGTGTTGGTCGAATTCT+GGG | 0.312332 | 2_3:+48067665 | Msa0295460:CDS |
| TTTATGGTGTTGTATAGTTA+TGG | 0.316211 | 2_3:+48068042 | Msa0295460:three_prime_UTR |
| CAATTATCTTATCTCAAGTT+TGG | 0.319499 | 2_3:+48067995 | Msa0295460:three_prime_UTR |
| ATTTGTGGTCAATGTTGCTT+TGG | 0.336888 | 2_3:-48067886 | None:intergenic |
| CTTTATGATATGTCGCTAAT+CGG | 0.363800 | 2_3:-48067971 | None:intergenic |
| GAAAAGAAAGATACAGTTAT+TGG | 0.371482 | 2_3:+48067855 | Msa0295460:CDS |
| CCTTCAGTTGCTACTCGGTA+TGG | 0.423871 | 2_3:+48067792 | Msa0295460:CDS |
| TTATGGTGTTGTATAGTTAT+GGG | 0.430717 | 2_3:+48068043 | Msa0295460:three_prime_UTR |
| TTTGTGGTCAATGTTGCTTT+GGG | 0.452585 | 2_3:-48067885 | None:intergenic |
| CGCAGACGAGTGGCGGAGAC+TGG | 0.459267 | 2_3:-48063872 | None:intergenic |
| GATAGTCGGAGAGCGAATAA+GGG | 0.467688 | 2_3:-48063792 | None:intergenic |
| AAAATGCCAGTGATGTCAAA+TGG | 0.470133 | 2_3:-48068152 | None:intergenic |
| CGCCGCTGGTCTCTCTCACT+CGG | 0.477237 | 2_3:+48063684 | Msa0295460:five_prime_UTR |
| GAGGAAACGCGGCAGTGCTC+CGG | 0.477586 | 2_3:-48063826 | None:intergenic |
| TATGGGATGCTTCCATATTG+TGG | 0.480198 | 2_3:+48068060 | Msa0295460:three_prime_UTR |
| TGAAATCCATTTGACATCAC+TGG | 0.489313 | 2_3:+48068146 | Msa0295460:three_prime_UTR |
| CGTGATAACACAGCCGTTGA+AGG | 0.489745 | 2_3:+48063950 | Msa0295460:CDS |
| TTTGCTAGCTCATCAACTAT+GGG | 0.494013 | 2_3:-48067720 | None:intergenic |
| CTTCAGTTGCTACTCGGTAT+GGG | 0.494438 | 2_3:+48067793 | Msa0295460:CDS |
| CAGACAAAGAAGGCTTCAGC+TGG | 0.507506 | 2_3:+48067932 | Msa0295460:three_prime_UTR |
| AGCTTGAGGCCGGTGTATTG+AGG | 0.508457 | 2_3:-48063845 | None:intergenic |
| GACTGGTCGGAGCTTGAGGC+CGG | 0.510218 | 2_3:-48063855 | None:intergenic |
| ATTGCAGAGAATCGTAGCTC+TGG | 0.518630 | 2_3:-48063740 | None:intergenic |
| TTCTTTGTCTGCGATCTCAC+AGG | 0.519311 | 2_3:-48067920 | None:intergenic |
| CGGCGAGAAGCGACGATAGT+CGG | 0.532417 | 2_3:-48063806 | None:intergenic |
| GCAGTGGCTTCTATTACTGA+TGG | 0.533416 | 2_3:+48067609 | Msa0295460:intron |
| TTCTTGAAGAAAATGACAGT+TGG | 0.533751 | 2_3:-48067828 | None:intergenic |
| AACCGAACCCTAACCTTCAA+CGG | 0.535342 | 2_3:-48063963 | None:intergenic |
| GCTACGATTCTCTGCAATCA+TGG | 0.535366 | 2_3:+48063745 | Msa0295460:exon |
| CGACTATCGTCGCTTCTCGC+CGG | 0.539273 | 2_3:+48063807 | Msa0295460:CDS |
| CGGAGACTGGTCGGAGCTTG+AGG | 0.546843 | 2_3:-48063859 | None:intergenic |
| TGTGAGATCGCAGACAAAGA+AGG | 0.554620 | 2_3:+48067922 | Msa0295460:exon |
| CGGAGAGCGAATAAGGGAGA+AGG | 0.558476 | 2_3:-48063786 | None:intergenic |
| TATGGGATGAATCATGCGGC+AGG | 0.560107 | 2_3:-48067703 | None:intergenic |
| TGGTCGAATTCTGGGCTCCA+TGG | 0.560925 | 2_3:+48067673 | Msa0295460:CDS |
| AGAATCTGAGATTCCTGTGT+TGG | 0.562341 | 2_3:+48067653 | Msa0295460:CDS |
| TCGAATGTTGTTCGTCGCGG+TGG | 0.566799 | 2_3:+48063908 | Msa0295460:CDS |
| ACCGCGACGAACAACATTCG+AGG | 0.568696 | 2_3:-48063906 | None:intergenic |
| CGGTGGAACCGTCGTGTGTG+AGG | 0.573215 | 2_3:+48063925 | Msa0295460:CDS |
| GGAGAAGGATTCGAGTTGTA+CGG | 0.579686 | 2_3:-48063771 | None:intergenic |
| GAATTCTGGGCTCCATGGTG+TGG | 0.587228 | 2_3:+48067678 | Msa0295460:CDS |
| AATCTCAGATTCTATGACAA+GGG | 0.589830 | 2_3:-48067643 | None:intergenic |
| GACGAGTGGCGGAGACTGGT+CGG | 0.590163 | 2_3:-48063868 | None:intergenic |
| GCCCAGAATTCGACCAACAC+AGG | 0.591293 | 2_3:-48067666 | None:intergenic |
| ATGCGGCAGGGACCACACCA+TGG | 0.592003 | 2_3:-48067690 | None:intergenic |
| CGACGAACAACATTCGAGGC+GGG | 0.593567 | 2_3:-48063902 | None:intergenic |
| CAGTCTCCGCCACTCGTCTG+CGG | 0.594319 | 2_3:+48063873 | Msa0295460:CDS |
| TTGACTCCGCAGACGAGTGG+CGG | 0.600852 | 2_3:-48063879 | None:intergenic |
| GAGCTAGCAAAAGAATATGC+GGG | 0.601362 | 2_3:+48067732 | Msa0295460:CDS |
| GGTCAATGTTGCTTTGGGCA+CGG | 0.605321 | 2_3:-48067880 | None:intergenic |
| AAAGTCCTTCAGTTGCTACT+CGG | 0.607500 | 2_3:+48067787 | Msa0295460:CDS |
| GGGTTGACTCCGCAGACGAG+TGG | 0.610441 | 2_3:-48063882 | None:intergenic |
| GCCTCGAATGTTGTTCGTCG+CGG | 0.633957 | 2_3:+48063905 | Msa0295460:CDS |
| TTCAACTTGATAAAATAGAG+CGG | 0.635619 | 2_3:-48068127 | None:intergenic |
| CCATACCGAGTAGCAACTGA+AGG | 0.641503 | 2_3:-48067792 | None:intergenic |
| TGAGCTAGCAAAAGAATATG+CGG | 0.650760 | 2_3:+48067731 | Msa0295460:CDS |
| ATGGGATGAATCATGCGGCA+GGG | 0.655515 | 2_3:-48067702 | None:intergenic |
| CAACTATGGGATGAATCATG+CGG | 0.659788 | 2_3:-48067707 | None:intergenic |
| GAATCTCAGATTCTATGACA+AGG | 0.685810 | 2_3:-48067644 | None:intergenic |
| ATCACGAGCCTCACACACGA+CGG | 0.693040 | 2_3:-48063933 | None:intergenic |
| GCCGGTGTATTGAGGAAACG+CGG | 0.696706 | 2_3:-48063837 | None:intergenic |
| GCCGCGTTTCCTCAATACAC+CGG | 0.698489 | 2_3:+48063836 | Msa0295460:CDS |
| GCGACGAACAACATTCGAGG+CGG | 0.707036 | 2_3:-48063903 | None:intergenic |
| GAAGGATTCGAGTTGTACGG+TGG | 0.711676 | 2_3:-48063768 | None:intergenic |
| GACCGAGTGAGAGAGACCAG+CGG | 0.726317 | 2_3:-48063686 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATGAATTTCTAAATT+TGG | + | chr2_3:48065717-48065736 | Msa0295460:intron | 10.0% |
| !! | AAAAAATTGAAAAACATAAA+TGG | - | chr2_3:48067428-48067447 | None:intergenic | 10.0% |
| !!! | ATTAAGTTTTATTGTTGTTA+TGG | + | chr2_3:48065407-48065426 | Msa0295460:intron | 15.0% |
| !!! | TAGTTAAACTTATGTTTTAT+TGG | + | chr2_3:48067581-48067600 | Msa0295460:intron | 15.0% |
| !!! | TAGTATCTGTTGTTTTTATT+TGG | - | chr2_3:48063648-48063667 | None:intergenic | 20.0% |
| !! | AAAAGAATGATACACTAAAA+GGG | - | chr2_3:48064238-48064257 | None:intergenic | 20.0% |
| !! | TAAAAGAATGATACACTAAA+AGG | - | chr2_3:48064239-48064258 | None:intergenic | 20.0% |
| !!! | ATAATCAATGGGTTTAATTA+GGG | - | chr2_3:48065231-48065250 | None:intergenic | 20.0% |
| !!! | AATAATCAATGGGTTTAATT+AGG | - | chr2_3:48065232-48065251 | None:intergenic | 20.0% |
| !!! | GAAGATTTTCAATAATCAAT+GGG | - | chr2_3:48065242-48065261 | None:intergenic | 20.0% |
| !! | CTTAATCATAATTATCTCAA+TGG | - | chr2_3:48065393-48065412 | None:intergenic | 20.0% |
| !! | TATGAATTTCTAAATTTGGT+AGG | + | chr2_3:48065721-48065740 | Msa0295460:intron | 20.0% |
| !!! | TTTGAAACTATTAACTAGTT+AGG | - | chr2_3:48065917-48065936 | None:intergenic | 20.0% |
| !!! | ATAAATATTTATTTGGAACG+TGG | - | chr2_3:48065944-48065963 | None:intergenic | 20.0% |
| !!! | TTATTGAAATTAAGCCATTT+TGG | + | chr2_3:48065960-48065979 | Msa0295460:intron | 20.0% |
| !! | AACCTAACATTATGAATATT+AGG | - | chr2_3:48066029-48066048 | None:intergenic | 20.0% |
| !! | ACAAATACAAAGTAAGATAT+TGG | - | chr2_3:48067097-48067116 | None:intergenic | 20.0% |
| !! | TAAAAATAAAATCAGAGTTC+TGG | - | chr2_3:48067188-48067207 | None:intergenic | 20.0% |
| !! | CTAAAAATATATGTTCAAGT+TGG | - | chr2_3:48067248-48067267 | None:intergenic | 20.0% |
| !! | CTTTCTTAAATAATCGTTTA+TGG | + | chr2_3:48068026-48068045 | Msa0295460:three_prime_UTR | 20.0% |
| !! | TTATCTAAAAAACCACAATA+TGG | - | chr2_3:48068075-48068094 | None:intergenic | 20.0% |
| !!! | GGAAGATAATATTGTTTTTG+TGG | - | chr2_3:48063627-48063646 | None:intergenic | 25.0% |
| !! | GGAAGATTTTCAATAATCAA+TGG | - | chr2_3:48065243-48065262 | None:intergenic | 25.0% |
| ! | ATTGAAAATCTTCCCAATAA+AGG | + | chr2_3:48065249-48065268 | Msa0295460:intron | 25.0% |
| !!! | TTATTGATAGTGCCTTTATT+GGG | - | chr2_3:48065264-48065283 | None:intergenic | 25.0% |
| !!! | ATTATTGATAGTGCCTTTAT+TGG | - | chr2_3:48065265-48065284 | None:intergenic | 25.0% |
| !!! | TAAAGGCACTATCAATAATT+AGG | + | chr2_3:48065266-48065285 | Msa0295460:intron | 25.0% |
| !!! | AAAGGCACTATCAATAATTA+GGG | + | chr2_3:48065267-48065286 | Msa0295460:intron | 25.0% |
| ! | TATGAATATGGGAATTGTAT+TGG | - | chr2_3:48065329-48065348 | None:intergenic | 25.0% |
| !!! | GGATTTTTTAAGATGGTTAT+AGG | + | chr2_3:48065511-48065530 | Msa0295460:intron | 25.0% |
| !!! | ACATCTTTAAAACTCCAAAA+CGG | - | chr2_3:48065549-48065568 | None:intergenic | 25.0% |
| !!! | GGAGTTTTAAAGATGTTTTT+AGG | + | chr2_3:48065553-48065572 | Msa0295460:intron | 25.0% |
| ! | TAACTAGTTAGGAATGTATT+TGG | - | chr2_3:48065906-48065925 | None:intergenic | 25.0% |
| ! | AAAATAACAGAACCATTAAG+TGG | - | chr2_3:48066205-48066224 | None:intergenic | 25.0% |
| ! | CATATATGTCAGTTATTCAA+GGG | - | chr2_3:48066408-48066427 | None:intergenic | 25.0% |
| ! | TCATATATGTCAGTTATTCA+AGG | - | chr2_3:48066409-48066428 | None:intergenic | 25.0% |
| ! | AGAACTTCCTTTAATAAAGA+TGG | + | chr2_3:48066559-48066578 | Msa0295460:intron | 25.0% |
| ! | AGCTACTACCTTATTAATTT+AGG | + | chr2_3:48066730-48066749 | Msa0295460:intron | 25.0% |
| ! | TAACACCATAATTACTTCTA+GGG | - | chr2_3:48066892-48066911 | None:intergenic | 25.0% |
| !!! | TAATAGATTTTGAAGCATTC+AGG | + | chr2_3:48066977-48066996 | Msa0295460:intron | 25.0% |
| ! | TTTCAATAAGCATGCTAAAA+TGG | + | chr2_3:48067125-48067144 | Msa0295460:intron | 25.0% |
| !! | TTTTTGATGCATTTATCATC+TGG | + | chr2_3:48067443-48067462 | Msa0295460:intron | 25.0% |
| ! | GAAAAGAAAGATACAGTTAT+TGG | + | chr2_3:48067855-48067874 | Msa0295460:CDS | 25.0% |
| !! | CAGGAATTTTTCTATATTTG+TGG | - | chr2_3:48067904-48067923 | None:intergenic | 25.0% |
| ! | CAAACTTGAGATAAGATAAT+TGG | - | chr2_3:48067997-48068016 | None:intergenic | 25.0% |
| ! | CAATTATCTTATCTCAAGTT+TGG | + | chr2_3:48067995-48068014 | Msa0295460:three_prime_UTR | 25.0% |
| !!! | TTTATGGTGTTGTATAGTTA+TGG | + | chr2_3:48068042-48068061 | Msa0295460:three_prime_UTR | 25.0% |
| !!! | TTATGGTGTTGTATAGTTAT+GGG | + | chr2_3:48068043-48068062 | Msa0295460:three_prime_UTR | 25.0% |
| ! | AAAAATTGAAGGCAACATAT+TGG | - | chr2_3:48068107-48068126 | None:intergenic | 25.0% |
| ! | TTCAACTTGATAAAATAGAG+CGG | - | chr2_3:48068130-48068149 | None:intergenic | 25.0% |
| !!! | TAATATTGTTTTTGTGGACG+AGG | - | chr2_3:48063621-48063640 | None:intergenic | 30.0% |
| TTAGATCTGTTGAAAGTGAT+TGG | + | chr2_3:48064023-48064042 | Msa0295460:intron | 30.0% | |
| TAGGTGACTTACAAAACTAA+CGG | - | chr2_3:48064108-48064127 | None:intergenic | 30.0% | |
| !!! | TTTTAAAACTCTAGCAACTG+GGG | - | chr2_3:48064142-48064161 | None:intergenic | 30.0% |
| !!! | CTTTTAAAACTCTAGCAACT+GGG | - | chr2_3:48064143-48064162 | None:intergenic | 30.0% |
| CTGAAATTTAGTGTACGTAT+TGG | + | chr2_3:48064163-48064182 | Msa0295460:intron | 30.0% | |
| AACATTGACATTAACTGACA+GGG | + | chr2_3:48064304-48064323 | Msa0295460:intron | 30.0% | |
| TTTCATGTGTTTCGGATTAT+GGG | - | chr2_3:48064362-48064381 | None:intergenic | 30.0% | |
| ATTTCATGTGTTTCGGATTA+TGG | - | chr2_3:48064363-48064382 | None:intergenic | 30.0% | |
| TGCGTATATTTCATGTGTTT+CGG | - | chr2_3:48064370-48064389 | None:intergenic | 30.0% | |
| AGTCTACATTGCACTAAAAA+GGG | + | chr2_3:48064616-48064635 | Msa0295460:intron | 30.0% | |
| TATATATTAAAAGAGCCACG+TGG | + | chr2_3:48064785-48064804 | Msa0295460:intron | 30.0% | |
| !! | ACTCTTCTTTTTCTCTGAAA+TGG | + | chr2_3:48065196-48065215 | Msa0295460:intron | 30.0% |
| ! | ATATGGGAATTGTATTGGTA+AGG | - | chr2_3:48065324-48065343 | None:intergenic | 30.0% |
| AGATTGAGTGCTATGAATAT+GGG | - | chr2_3:48065340-48065359 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTCGTTTTCTGTTC+TGG | + | chr2_3:48065474-48065493 | Msa0295460:intron | 30.0% |
| !!! | CTGCATTGGATTTTTTAAGA+TGG | + | chr2_3:48065504-48065523 | Msa0295460:intron | 30.0% |
| GGCCTAATATTCATAATGTT+AGG | + | chr2_3:48066024-48066043 | Msa0295460:intron | 30.0% | |
| ATTGAACATCATCACACATA+AGG | + | chr2_3:48066082-48066101 | Msa0295460:intron | 30.0% | |
| AAAAACTGCATAACATGCTT+AGG | - | chr2_3:48066168-48066187 | None:intergenic | 30.0% | |
| ! | TAAGCATGTTATGCAGTTTT+TGG | + | chr2_3:48066167-48066186 | Msa0295460:intron | 30.0% |
| ! | TTTCACTAAATGCCACTTAA+TGG | + | chr2_3:48066190-48066209 | Msa0295460:intron | 30.0% |
| GTTGCTTACTCTAATAGTTA+TGG | + | chr2_3:48066229-48066248 | Msa0295460:intron | 30.0% | |
| TATAACTCATCTAATCAACG+AGG | - | chr2_3:48066467-48066486 | None:intergenic | 30.0% | |
| TTGTGTTGAGTCTAATTACA+TGG | + | chr2_3:48066507-48066526 | Msa0295460:intron | 30.0% | |
| CTGTTTATGAGTATTAGTGT+TGG | + | chr2_3:48066615-48066634 | Msa0295460:intron | 30.0% | |
| CATTTCCCTAGAAGTAATTA+TGG | + | chr2_3:48066884-48066903 | Msa0295460:intron | 30.0% | |
| CTAACACCATAATTACTTCT+AGG | - | chr2_3:48066893-48066912 | None:intergenic | 30.0% | |
| GTACTAATACTAGTGTTTGT+TGG | + | chr2_3:48067017-48067036 | Msa0295460:intron | 30.0% | |
| CAAAGTAAGATATTGGTCAA+AGG | - | chr2_3:48067090-48067109 | None:intergenic | 30.0% | |
| ! | TGCTAAAATGGTATAGCTTT+TGG | + | chr2_3:48067137-48067156 | Msa0295460:intron | 30.0% |
| !! | TGTTTTATTGGATATTGCAG+TGG | + | chr2_3:48067593-48067612 | Msa0295460:intron | 30.0% |
| CTTCTATTACTGATGGAAAT+TGG | + | chr2_3:48067616-48067635 | Msa0295460:CDS | 30.0% | |
| AATCTCAGATTCTATGACAA+GGG | - | chr2_3:48067646-48067665 | None:intergenic | 30.0% | |
| TTCTTGAAGAAAATGACAGT+TGG | - | chr2_3:48067831-48067850 | None:intergenic | 30.0% | |
| !!! | ACTGTCATTTTCTTCAAGAA+CGG | + | chr2_3:48067831-48067850 | Msa0295460:CDS | 30.0% |
| CTTTATGATATGTCGCTAAT+CGG | - | chr2_3:48067974-48067993 | None:intergenic | 30.0% | |
| AAATAGAGCGGAAAAATTGA+AGG | - | chr2_3:48068118-48068137 | None:intergenic | 30.0% | |
| ATTCTTACTCACAGTCACAT+AGG | - | chr2_3:48064059-48064078 | None:intergenic | 35.0% | |
| ! | ACGGAGGAACTAATTTTCAT+TGG | - | chr2_3:48064089-48064108 | None:intergenic | 35.0% |
| AACTGGGGGAAAAAAAATCT+AGG | - | chr2_3:48064127-48064146 | None:intergenic | 35.0% | |
| ! | TTTAAAACTCTAGCAACTGG+GGG | - | chr2_3:48064141-48064160 | None:intergenic | 35.0% |
| !!! | GCTTTTAAAACTCTAGCAAC+TGG | - | chr2_3:48064144-48064163 | None:intergenic | 35.0% |
| GCAAACAAACATTCAGAATG+AGG | + | chr2_3:48064271-48064290 | Msa0295460:intron | 35.0% | |
| CAACATTGACATTAACTGAC+AGG | + | chr2_3:48064303-48064322 | Msa0295460:intron | 35.0% | |
| ACATTGACATTAACTGACAG+GGG | + | chr2_3:48064305-48064324 | Msa0295460:intron | 35.0% | |
| CTTCAATTGTAGACATTGAC+AGG | + | chr2_3:48064525-48064544 | Msa0295460:intron | 35.0% | |
| GAGTCTACATTGCACTAAAA+AGG | + | chr2_3:48064615-48064634 | Msa0295460:intron | 35.0% | |
| CGGGTAAAAAATTAGCATGT+GGG | - | chr2_3:48064856-48064875 | None:intergenic | 35.0% | |
| GTTGAAAAACGTAAACTCGT+TGG | + | chr2_3:48065000-48065019 | Msa0295460:intron | 35.0% | |
| !!! | AGTTTTGAAACCCAGAAAAC+CGG | + | chr2_3:48065043-48065062 | Msa0295460:intron | 35.0% |
| !! | ACGCATTTTTGCTATCAGAA+AGG | + | chr2_3:48065156-48065175 | Msa0295460:intron | 35.0% |
| TCCAATACACCCATAAATCA+TGG | + | chr2_3:48065296-48065315 | Msa0295460:intron | 35.0% | |
| TCCATGATTTATGGGTGTAT+TGG | - | chr2_3:48065300-48065319 | None:intergenic | 35.0% | |
| GGTAAGGTTCCATGATTTAT+GGG | - | chr2_3:48065308-48065327 | None:intergenic | 35.0% | |
| TGGTAAGGTTCCATGATTTA+TGG | - | chr2_3:48065309-48065328 | None:intergenic | 35.0% | |
| GAGATTGAGTGCTATGAATA+TGG | - | chr2_3:48065341-48065360 | None:intergenic | 35.0% | |
| CTCTCTCACGTTACTTATTT+GGG | + | chr2_3:48065361-48065380 | Msa0295460:intron | 35.0% | |
| ! | TCTTTAAGAGCCATACAAAC+TGG | + | chr2_3:48065864-48065883 | Msa0295460:intron | 35.0% |
| AAAGCCCCAAACCAAATATT+GGG | - | chr2_3:48066057-48066076 | None:intergenic | 35.0% | |
| TAAAGCCCCAAACCAAATAT+TGG | - | chr2_3:48066058-48066077 | None:intergenic | 35.0% | |
| TAAGGTGAAGTTGTTAACCA+TGG | + | chr2_3:48066100-48066119 | Msa0295460:intron | 35.0% | |
| AAGGTGAAGTTGTTAACCAT+GGG | + | chr2_3:48066101-48066120 | Msa0295460:intron | 35.0% | |
| !!! | CCATTTTTTCTATTTGCCCA+TGG | - | chr2_3:48066120-48066139 | None:intergenic | 35.0% |
| CCATGGGCAAATAGAAAAAA+TGG | + | chr2_3:48066117-48066136 | Msa0295460:intron | 35.0% | |
| ACTCTAATAGTTATGGACAG+AGG | + | chr2_3:48066236-48066255 | Msa0295460:intron | 35.0% | |
| TCATGCTAAGATACTACAGA+AGG | - | chr2_3:48066338-48066357 | None:intergenic | 35.0% | |
| GATTAGATGAGTTATACGAC+AGG | + | chr2_3:48066471-48066490 | Msa0295460:intron | 35.0% | |
| CTCTGATTCTCTCAATCAAT+GGG | - | chr2_3:48066592-48066611 | None:intergenic | 35.0% | |
| TCTCTGATTCTCTCAATCAA+TGG | - | chr2_3:48066593-48066612 | None:intergenic | 35.0% | |
| ! | AGTATTAGTGTTGGAACTCT+TGG | + | chr2_3:48066624-48066643 | Msa0295460:intron | 35.0% |
| GTTGGAACTCTTGGAATTAA+AGG | + | chr2_3:48066633-48066652 | Msa0295460:intron | 35.0% | |
| AGGATAAATTGAATGTCGAG+CGG | + | chr2_3:48066653-48066672 | Msa0295460:intron | 35.0% | |
| CACGAAGGCCTAAATTAATA+AGG | - | chr2_3:48066741-48066760 | None:intergenic | 35.0% | |
| CCTTCGTGTTATAGAAGTAA+GGG | + | chr2_3:48066753-48066772 | Msa0295460:intron | 35.0% | |
| !! | TTTCTTAACTTGTGCCCTAA+GGG | - | chr2_3:48066794-48066813 | None:intergenic | 35.0% |
| ! | AAATGATAACTTGTGCCCTT+GGG | - | chr2_3:48066869-48066888 | None:intergenic | 35.0% |
| !! | ACTAGTGTTTGTTGGTAACT+TGG | + | chr2_3:48067025-48067044 | Msa0295460:intron | 35.0% |
| !! | AGTTCTGGTTCTTGTTTCTT+CGG | - | chr2_3:48067173-48067192 | None:intergenic | 35.0% |
| TATTTGAATCTGTGACCTCA+AGG | - | chr2_3:48067317-48067336 | None:intergenic | 35.0% | |
| GAGGTCACAGATTCAAATAT+TGG | + | chr2_3:48067318-48067337 | Msa0295460:intron | 35.0% | |
| GAATCTCAGATTCTATGACA+AGG | - | chr2_3:48067647-48067666 | None:intergenic | 35.0% | |
| TTTGCTAGCTCATCAACTAT+GGG | - | chr2_3:48067723-48067742 | None:intergenic | 35.0% | |
| ! | TTTTGCTAGCTCATCAACTA+TGG | - | chr2_3:48067724-48067743 | None:intergenic | 35.0% |
| TGAGCTAGCAAAAGAATATG+CGG | + | chr2_3:48067731-48067750 | Msa0295460:CDS | 35.0% | |
| !! | TTTGTGGTCAATGTTGCTTT+GGG | - | chr2_3:48067888-48067907 | None:intergenic | 35.0% |
| ! | ATTTGTGGTCAATGTTGCTT+TGG | - | chr2_3:48067889-48067908 | None:intergenic | 35.0% |
| TGAAATCCATTTGACATCAC+TGG | + | chr2_3:48068146-48068165 | Msa0295460:three_prime_UTR | 35.0% | |
| AAACAAAAACATTTCGCCGC+TGG | + | chr2_3:48063670-48063689 | Msa0295460:five_prime_UTR | 40.0% | |
| GTGACTTACAAAACTAACGG+AGG | - | chr2_3:48064105-48064124 | None:intergenic | 40.0% | |
| CATTGACATTAACTGACAGG+GGG | + | chr2_3:48064306-48064325 | Msa0295460:intron | 40.0% | |
| AATTCCCAGCTAAGGTGAAA+TGG | + | chr2_3:48064329-48064348 | Msa0295460:intron | 40.0% | |
| ! | AGTGGTGGGATTTGATATGT+AGG | - | chr2_3:48064416-48064435 | None:intergenic | 40.0% |
| ! | AGGGGAGATTTAGTTTCAAG+GGG | - | chr2_3:48064444-48064463 | None:intergenic | 40.0% |
| ! | GAGGGGAGATTTAGTTTCAA+GGG | - | chr2_3:48064445-48064464 | None:intergenic | 40.0% |
| ! | TGAGGGGAGATTTAGTTTCA+AGG | - | chr2_3:48064446-48064465 | None:intergenic | 40.0% |
| TCCTAGGAGGGAAATAGAAA+GGG | - | chr2_3:48064472-48064491 | None:intergenic | 40.0% | |
| ATCCTAGGAGGGAAATAGAA+AGG | - | chr2_3:48064473-48064492 | None:intergenic | 40.0% | |
| TTGACAGGCCTCTCAATTAT+AGG | + | chr2_3:48064540-48064559 | Msa0295460:intron | 40.0% | |
| AGGAATAAGGAACCCAATCT+TGG | - | chr2_3:48064579-48064598 | None:intergenic | 40.0% | |
| TGGGTTCCTTATTCCTATCA+TGG | + | chr2_3:48064583-48064602 | Msa0295460:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr2_3:48064690-48064709 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr2_3:48064716-48064735 | None:intergenic | 40.0% | |
| ! | CTTACCCTGTTTTACACAAG+AGG | + | chr2_3:48064714-48064733 | Msa0295460:intron | 40.0% |
| ACAGCCTCTTGTGTAAAACA+GGG | - | chr2_3:48064721-48064740 | None:intergenic | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | - | chr2_3:48064722-48064741 | None:intergenic | 40.0% | |
| GCGGGTAAAAAATTAGCATG+TGG | - | chr2_3:48064857-48064876 | None:intergenic | 40.0% | |
| !!! | ATGCTAATTTTTTACCCGCG+TGG | + | chr2_3:48064858-48064877 | Msa0295460:intron | 40.0% |
| GGGTTTCAAAACTAATCGTC+TGG | - | chr2_3:48065036-48065055 | None:intergenic | 40.0% | |
| !!! | GTTTTGAAACCCAGAAAACC+GGG | + | chr2_3:48065044-48065063 | Msa0295460:intron | 40.0% |
| TCTGGAAACGAAACACCAAA+CGG | - | chr2_3:48065091-48065110 | None:intergenic | 40.0% | |
| GTGTTTCGTTTCCAGAAATC+CGG | + | chr2_3:48065095-48065114 | Msa0295460:intron | 40.0% | |
| ! | TCCAGAAATCCGGATCTTTT+CGG | + | chr2_3:48065105-48065124 | Msa0295460:intron | 40.0% |
| AAAATGCGTTCTTTGCGATG+CGG | - | chr2_3:48065145-48065164 | None:intergenic | 40.0% | |
| CCAAATAAGTAACGTGAGAG+AGG | - | chr2_3:48065363-48065382 | None:intergenic | 40.0% | |
| CCTCTCTCACGTTACTTATT+TGG | + | chr2_3:48065360-48065379 | Msa0295460:intron | 40.0% | |
| !!! | GGTGTTATTTGCTACCGTTT+TGG | + | chr2_3:48065532-48065551 | Msa0295460:intron | 40.0% |
| TCGAGATCCTAAGTAAGATC+GGG | - | chr2_3:48065797-48065816 | None:intergenic | 40.0% | |
| CTCGAGATCCTAAGTAAGAT+CGG | - | chr2_3:48065798-48065817 | None:intergenic | 40.0% | |
| ACATTGTTGAAGTCATGCAG+TGG | - | chr2_3:48065841-48065860 | None:intergenic | 40.0% | |
| ! | TAGGTTGAGCTCCCAATATT+TGG | + | chr2_3:48066043-48066062 | Msa0295460:intron | 40.0% |
| TGAGCTCCCAATATTTGGTT+TGG | + | chr2_3:48066048-48066067 | Msa0295460:intron | 40.0% | |
| ! | GAGCTCCCAATATTTGGTTT+GGG | + | chr2_3:48066049-48066068 | Msa0295460:intron | 40.0% |
| !! | AGCTCCCAATATTTGGTTTG+GGG | + | chr2_3:48066050-48066069 | Msa0295460:intron | 40.0% |
| ! | AGCTAGAATCGCTCGAATTT+TGG | - | chr2_3:48066272-48066291 | None:intergenic | 40.0% |
| ! | CCATTCAAGAGCATGTGAAT+TGG | - | chr2_3:48066374-48066393 | None:intergenic | 40.0% |
| CCAATTCACATGCTCTTGAA+TGG | + | chr2_3:48066371-48066390 | Msa0295460:intron | 40.0% | |
| CGTGGGACCATCTTTATTAA+AGG | - | chr2_3:48066569-48066588 | None:intergenic | 40.0% | |
| GCCTTCGTGTTATAGAAGTA+AGG | + | chr2_3:48066752-48066771 | Msa0295460:intron | 40.0% | |
| CCCTTACTTCTATAACACGA+AGG | - | chr2_3:48066756-48066775 | None:intergenic | 40.0% | |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr2_3:48066776-48066795 | Msa0295460:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr2_3:48066777-48066796 | Msa0295460:intron | 40.0% |
| !! | GTTTCTTAACTTGTGCCCTA+AGG | - | chr2_3:48066795-48066814 | None:intergenic | 40.0% |
| CTTCTAAACTTGTACCCCAA+GGG | + | chr2_3:48066851-48066870 | Msa0295460:intron | 40.0% | |
| ! | AATGATAACTTGTGCCCTTG+GGG | - | chr2_3:48066868-48066887 | None:intergenic | 40.0% |
| ! | GAAATGATAACTTGTGCCCT+TGG | - | chr2_3:48066870-48066889 | None:intergenic | 40.0% |
| AGGTCACAATGGTTGAATCA+AGG | - | chr2_3:48067297-48067316 | None:intergenic | 40.0% | |
| ATTCAACCATTGTGACCTTG+AGG | + | chr2_3:48067299-48067318 | Msa0295460:intron | 40.0% | |
| TCTTAAGCATACAAGCAGAG+AGG | - | chr2_3:48067350-48067369 | None:intergenic | 40.0% | |
| TTACTCAGACTGCAACTGAT+GGG | + | chr2_3:48067383-48067402 | Msa0295460:intron | 40.0% | |
| ! | GTTTGCATGTTTTGCAGTTC+AGG | + | chr2_3:48067465-48067484 | Msa0295460:intron | 40.0% |
| ! | AGAATCTGAGATTCCTGTGT+TGG | + | chr2_3:48067653-48067672 | Msa0295460:CDS | 40.0% |
| CAACTATGGGATGAATCATG+CGG | - | chr2_3:48067710-48067729 | None:intergenic | 40.0% | |
| GAGCTAGCAAAAGAATATGC+GGG | + | chr2_3:48067732-48067751 | Msa0295460:CDS | 40.0% | |
| AAAGTCCTTCAGTTGCTACT+CGG | + | chr2_3:48067787-48067806 | Msa0295460:CDS | 40.0% | |
| TATGGGATGCTTCCATATTG+TGG | + | chr2_3:48068060-48068079 | Msa0295460:three_prime_UTR | 40.0% | |
| ATTGCAGAGAATCGTAGCTC+TGG | - | chr2_3:48063743-48063762 | None:intergenic | 45.0% | |
| GCTACGATTCTCTGCAATCA+TGG | + | chr2_3:48063745-48063764 | Msa0295460:exon | 45.0% | |
| !! | GGAGAAGGATTCGAGTTGTA+CGG | - | chr2_3:48063774-48063793 | None:intergenic | 45.0% |
| GATAGTCGGAGAGCGAATAA+GGG | - | chr2_3:48063795-48063814 | None:intergenic | 45.0% | |
| TAACACAGCCGTTGAAGGTT+AGG | + | chr2_3:48063955-48063974 | Msa0295460:intron | 45.0% | |
| AACACAGCCGTTGAAGGTTA+GGG | + | chr2_3:48063956-48063975 | Msa0295460:intron | 45.0% | |
| AACCGAACCCTAACCTTCAA+CGG | - | chr2_3:48063966-48063985 | None:intergenic | 45.0% | |
| TACGTATTGGAACCCCTTTC+CGG | + | chr2_3:48064176-48064195 | Msa0295460:intron | 45.0% | |
| ATAAAGCTCCCGCATACGTA+GGG | - | chr2_3:48064203-48064222 | None:intergenic | 45.0% | |
| AATAAAGCTCCCGCATACGT+AGG | - | chr2_3:48064204-48064223 | None:intergenic | 45.0% | |
| TGTTTCGGATTATGGGCTTG+GGG | - | chr2_3:48064355-48064374 | None:intergenic | 45.0% | |
| GTGTTTCGGATTATGGGCTT+GGG | - | chr2_3:48064356-48064375 | None:intergenic | 45.0% | |
| TGTGTTTCGGATTATGGGCT+TGG | - | chr2_3:48064357-48064376 | None:intergenic | 45.0% | |
| GGTGGGATTTGATATGTAGG+TGG | - | chr2_3:48064413-48064432 | None:intergenic | 45.0% | |
| TAGTTTCAAGGGGGAGAAAG+TGG | - | chr2_3:48064434-48064453 | None:intergenic | 45.0% | |
| ! | GGGGAGATTTAGTTTCAAGG+GGG | - | chr2_3:48064443-48064462 | None:intergenic | 45.0% |
| TAGGAGGGAAATAGAAAGGG+GGG | - | chr2_3:48064469-48064488 | None:intergenic | 45.0% | |
| CTAGGAGGGAAATAGAAAGG+GGG | - | chr2_3:48064470-48064489 | None:intergenic | 45.0% | |
| CCTAGGAGGGAAATAGAAAG+GGG | - | chr2_3:48064471-48064490 | None:intergenic | 45.0% | |
| ACTCTAGTCTCATCCTAGGA+GGG | - | chr2_3:48064484-48064503 | None:intergenic | 45.0% | |
| TACTCTAGTCTCATCCTAGG+AGG | - | chr2_3:48064485-48064504 | None:intergenic | 45.0% | |
| TGCTACTCTAGTCTCATCCT+AGG | - | chr2_3:48064488-48064507 | None:intergenic | 45.0% | |
| TAGGATGAGACTAGAGTAGC+AGG | + | chr2_3:48064487-48064506 | Msa0295460:intron | 45.0% | |
| AGGATGAGACTAGAGTAGCA+GGG | + | chr2_3:48064488-48064507 | Msa0295460:intron | 45.0% | |
| CCTCGACACCTATAATTGAG+AGG | - | chr2_3:48064551-48064570 | None:intergenic | 45.0% | |
| ! | CCTCTCAATTATAGGTGTCG+AGG | + | chr2_3:48064548-48064567 | Msa0295460:intron | 45.0% |
| TGTCGAGGAAACACCAAGAT+TGG | + | chr2_3:48064563-48064582 | Msa0295460:intron | 45.0% | |
| GTCGAGGAAACACCAAGATT+GGG | + | chr2_3:48064564-48064583 | Msa0295460:intron | 45.0% | |
| GAGGCTCCATGATAGGAATA+AGG | - | chr2_3:48064592-48064611 | None:intergenic | 45.0% | |
| ATTCCTATCATGGAGCCTCA+TGG | + | chr2_3:48064593-48064612 | Msa0295460:intron | 45.0% | |
| AGTGCAATGTAGACTCCATG+AGG | - | chr2_3:48064611-48064630 | None:intergenic | 45.0% | |
| TTGCACTAAAAAGGGCAACC+CGG | + | chr2_3:48064624-48064643 | Msa0295460:intron | 45.0% | |
| ACTAGAGCTCTCACATATGC+AGG | + | chr2_3:48064650-48064669 | Msa0295460:intron | 45.0% | |
| CTAGAGCTCTCACATATGCA+GGG | + | chr2_3:48064651-48064670 | Msa0295460:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr2_3:48064691-48064710 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr2_3:48064694-48064713 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr2_3:48064725-48064744 | Msa0295460:intron | 45.0% |
| GTGGGTACAAATTCACCTGA+CGG | - | chr2_3:48064838-48064857 | None:intergenic | 45.0% | |
| GATCGAGAGTTTGTCTACCT+TGG | - | chr2_3:48064884-48064903 | None:intergenic | 45.0% | |
| AAACTCTCGATCCAACTCGT+AGG | + | chr2_3:48064892-48064911 | Msa0295460:intron | 45.0% | |
| ! | CCAGAAATCCGGATCTTTTC+GGG | + | chr2_3:48065106-48065125 | Msa0295460:intron | 45.0% |
| !!! | AAATCCGGATCTTTTCGGGT+CGG | + | chr2_3:48065110-48065129 | Msa0295460:intron | 45.0% |
| AAATGCGTTCTTTGCGATGC+GGG | - | chr2_3:48065144-48065163 | None:intergenic | 45.0% | |
| GATCCTAAGTAAGATCGGGT+AGG | - | chr2_3:48065793-48065812 | None:intergenic | 45.0% | |
| GCGTAAGTTGCCAGTTTGTA+TGG | - | chr2_3:48065877-48065896 | None:intergenic | 45.0% | |
| ! | CTTGGTGACACTGACCAAAA+TGG | - | chr2_3:48065977-48065996 | None:intergenic | 45.0% |
| AGTGTCACCAAGACACTTCT+GGG | + | chr2_3:48065985-48066004 | Msa0295460:intron | 45.0% | |
| ! | CTGGGTGGGTTCACAATATT+TGG | + | chr2_3:48066003-48066022 | Msa0295460:intron | 45.0% |
| GTTATGGACAGAGGCTTTCT+TGG | + | chr2_3:48066245-48066264 | Msa0295460:intron | 45.0% | |
| GATACTACAGAAGGCTGCAA+AGG | - | chr2_3:48066329-48066348 | None:intergenic | 45.0% | |
| TTCTCTCAATCAATGGGCGT+GGG | - | chr2_3:48066586-48066605 | None:intergenic | 45.0% | |
| ATTCTCTCAATCAATGGGCG+TGG | - | chr2_3:48066587-48066606 | None:intergenic | 45.0% | |
| GGTCCAATACCATCTTCAGA+GGG | + | chr2_3:48066674-48066693 | Msa0295460:intron | 45.0% | |
| GTCCAATACCATCTTCAGAG+GGG | + | chr2_3:48066675-48066694 | Msa0295460:intron | 45.0% | |
| GCTTCTAAACTTGTACCCCA+AGG | + | chr2_3:48066850-48066869 | Msa0295460:intron | 45.0% | |
| AGCATTCAGGATTGATGTGC+TGG | + | chr2_3:48066990-48067009 | Msa0295460:intron | 45.0% | |
| ATTCAGGATTGATGTGCTGG+TGG | + | chr2_3:48066993-48067012 | Msa0295460:intron | 45.0% | |
| ! | TGGTTCTTGTTTCTTCGGCT+GGG | - | chr2_3:48067168-48067187 | None:intergenic | 45.0% |
| CATCAGTTGCAGTCTGAGTA+AGG | - | chr2_3:48067384-48067403 | None:intergenic | 45.0% | |
| CTTACTCAGACTGCAACTGA+TGG | + | chr2_3:48067382-48067401 | Msa0295460:intron | 45.0% | |
| GCAGTGGCTTCTATTACTGA+TGG | + | chr2_3:48067609-48067628 | Msa0295460:intron | 45.0% | |
| ! | TTCCTGTGTTGGTCGAATTC+TGG | + | chr2_3:48067664-48067683 | Msa0295460:CDS | 45.0% |
| ! | TCCTGTGTTGGTCGAATTCT+GGG | + | chr2_3:48067665-48067684 | Msa0295460:CDS | 45.0% |
| CTTCAGTTGCTACTCGGTAT+GGG | + | chr2_3:48067793-48067812 | Msa0295460:CDS | 45.0% | |
| TTCTTTGTCTGCGATCTCAC+AGG | - | chr2_3:48067923-48067942 | None:intergenic | 45.0% | |
| TGTGAGATCGCAGACAAAGA+AGG | + | chr2_3:48067922-48067941 | Msa0295460:exon | 45.0% | |
| !! | AATTTCAATAAATATTTATT+TGG | - | chr2_3:48065951-48065970 | None:intergenic | 5.0% |
| !! | GAAGGATTCGAGTTGTACGG+TGG | - | chr2_3:48063771-48063790 | None:intergenic | 50.0% |
| CGATAGTCGGAGAGCGAATA+AGG | - | chr2_3:48063796-48063815 | None:intergenic | 50.0% | |
| CGTGATAACACAGCCGTTGA+AGG | + | chr2_3:48063950-48063969 | Msa0295460:CDS | 50.0% | |
| AGCCGTTGAAGGTTAGGGTT+CGG | + | chr2_3:48063961-48063980 | Msa0295460:intron | 50.0% | |
| !! | ATGCGGGAGCTTTATTGCAC+CGG | + | chr2_3:48064208-48064227 | Msa0295460:intron | 50.0% |
| GATACACTAAAAGGGCAGCC+CGG | - | chr2_3:48064230-48064249 | None:intergenic | 50.0% | |
| TTCAAGGGGGAGAAAGTGGT+GGG | - | chr2_3:48064430-48064449 | None:intergenic | 50.0% | |
| TTTCAAGGGGGAGAAAGTGG+TGG | - | chr2_3:48064431-48064450 | None:intergenic | 50.0% | |
| GAAATAGAAAGGGGGGTGAG+GGG | - | chr2_3:48064462-48064481 | None:intergenic | 50.0% | |
| GGAAATAGAAAGGGGGGTGA+GGG | - | chr2_3:48064463-48064482 | None:intergenic | 50.0% | |
| CCCCTTTCTATTTCCCTCCT+AGG | + | chr2_3:48064468-48064487 | Msa0295460:intron | 50.0% | |
| ACTCCATGAGGCTCCATGAT+AGG | - | chr2_3:48064599-48064618 | None:intergenic | 50.0% | |
| ! | ATGTGAGAGCTCTAGTGCAC+CGG | - | chr2_3:48064646-48064665 | None:intergenic | 50.0% |
| AGTGCAATGTAGACTCCTCC+TGG | - | chr2_3:48064746-48064765 | None:intergenic | 50.0% | |
| ! | CAACACCTCGTGAAAGGCAT+TGG | - | chr2_3:48064812-48064831 | None:intergenic | 50.0% |
| !!! | ATTTTTTACCCGCGTGGCCA+AGG | + | chr2_3:48064864-48064883 | Msa0295460:intron | 50.0% |
| GGGATGTGAGATCGTGAACT+CGG | - | chr2_3:48064923-48064942 | None:intergenic | 50.0% | |
| !! | GAGTCGTCGGAATCGGTTTT+TGG | + | chr2_3:48064957-48064976 | Msa0295460:intron | 50.0% |
| !! | TCGTCGGAATCGGTTTTTGG+TGG | + | chr2_3:48064960-48064979 | Msa0295460:intron | 50.0% |
| !!! | GGTTTTTGGTGGTCGCTGAT+TGG | + | chr2_3:48064971-48064990 | Msa0295460:intron | 50.0% |
| CCCGAAAAGATCCGGATTTC+TGG | - | chr2_3:48065109-48065128 | None:intergenic | 50.0% | |
| !!! | AATCCGGATCTTTTCGGGTC+GGG | + | chr2_3:48065111-48065130 | Msa0295460:intron | 50.0% |
| TGAATCGGGGGATCGTAACA+CGG | - | chr2_3:48065757-48065776 | None:intergenic | 50.0% | |
| ACCCATGAGATCGTGAATCG+GGG | - | chr2_3:48065770-48065789 | None:intergenic | 50.0% | |
| GACCCATGAGATCGTGAATC+GGG | - | chr2_3:48065771-48065790 | None:intergenic | 50.0% | |
| GGACCCATGAGATCGTGAAT+CGG | - | chr2_3:48065772-48065791 | None:intergenic | 50.0% | |
| GGTCCTACCCGATCTTACTT+AGG | + | chr2_3:48065787-48065806 | Msa0295460:intron | 50.0% | |
| CAGTGTCACCAAGACACTTC+TGG | + | chr2_3:48065984-48066003 | Msa0295460:intron | 50.0% | |
| TCACCAAGACACTTCTGGGT+GGG | + | chr2_3:48065989-48066008 | Msa0295460:intron | 50.0% | |
| CGGTCCAATACCATCTTCAG+AGG | + | chr2_3:48066673-48066692 | Msa0295460:intron | 50.0% | |
| ! | CTCCCCTCTGAAGATGGTAT+TGG | - | chr2_3:48066680-48066699 | None:intergenic | 50.0% |
| ! | CTGGTTCTTGTTTCTTCGGC+TGG | - | chr2_3:48067169-48067188 | None:intergenic | 50.0% |
| CTGTGACCTCAAGGTCACAA+TGG | - | chr2_3:48067308-48067327 | None:intergenic | 50.0% | |
| ATGGGATGAATCATGCGGCA+GGG | - | chr2_3:48067705-48067724 | None:intergenic | 50.0% | |
| TATGGGATGAATCATGCGGC+AGG | - | chr2_3:48067706-48067725 | None:intergenic | 50.0% | |
| CCATACCGAGTAGCAACTGA+AGG | - | chr2_3:48067795-48067814 | None:intergenic | 50.0% | |
| CCTTCAGTTGCTACTCGGTA+TGG | + | chr2_3:48067792-48067811 | Msa0295460:CDS | 50.0% | |
| !! | GGTCAATGTTGCTTTGGGCA+CGG | - | chr2_3:48067883-48067902 | None:intergenic | 50.0% |
| CAGACAAAGAAGGCTTCAGC+TGG | + | chr2_3:48067932-48067951 | Msa0295460:three_prime_UTR | 50.0% | |
| CGGAGAGCGAATAAGGGAGA+AGG | - | chr2_3:48063789-48063808 | None:intergenic | 55.0% | |
| GCCGCGTTTCCTCAATACAC+CGG | + | chr2_3:48063836-48063855 | Msa0295460:CDS | 55.0% | |
| GCCGGTGTATTGAGGAAACG+CGG | - | chr2_3:48063840-48063859 | None:intergenic | 55.0% | |
| AGCTTGAGGCCGGTGTATTG+AGG | - | chr2_3:48063848-48063867 | None:intergenic | 55.0% | |
| CGACGAACAACATTCGAGGC+GGG | - | chr2_3:48063905-48063924 | None:intergenic | 55.0% | |
| GCGACGAACAACATTCGAGG+CGG | - | chr2_3:48063906-48063925 | None:intergenic | 55.0% | |
| GCCTCGAATGTTGTTCGTCG+CGG | + | chr2_3:48063905-48063924 | Msa0295460:CDS | 55.0% | |
| ACCGCGACGAACAACATTCG+AGG | - | chr2_3:48063909-48063928 | None:intergenic | 55.0% | |
| TCGAATGTTGTTCGTCGCGG+TGG | + | chr2_3:48063908-48063927 | Msa0295460:CDS | 55.0% | |
| ATCACGAGCCTCACACACGA+CGG | - | chr2_3:48063936-48063955 | None:intergenic | 55.0% | |
| CATACGTAGGGTCCGGAAAG+GGG | - | chr2_3:48064191-48064210 | None:intergenic | 55.0% | |
| GCATACGTAGGGTCCGGAAA+GGG | - | chr2_3:48064192-48064211 | None:intergenic | 55.0% | |
| CTTTCCGGACCCTACGTATG+CGG | + | chr2_3:48064191-48064210 | Msa0295460:intron | 55.0% | |
| TTTCCGGACCCTACGTATGC+GGG | + | chr2_3:48064192-48064211 | Msa0295460:intron | 55.0% | |
| !! | TGCGGGAGCTTTATTGCACC+GGG | + | chr2_3:48064209-48064228 | Msa0295460:intron | 55.0% |
| ACAGGGGGAATTCCCAGCTA+AGG | + | chr2_3:48064321-48064340 | Msa0295460:intron | 55.0% | |
| GGGGCCATTTCACCTTAGCT+GGG | - | chr2_3:48064336-48064355 | None:intergenic | 55.0% | |
| TGGGGCCATTTCACCTTAGC+TGG | - | chr2_3:48064337-48064356 | None:intergenic | 55.0% | |
| GGGAAATAGAAAGGGGGGTG+AGG | - | chr2_3:48064464-48064483 | None:intergenic | 55.0% | |
| GAGACTAGAGTAGCAGGGCA+CGG | + | chr2_3:48064493-48064512 | Msa0295460:intron | 55.0% | |
| AGACTAGAGTAGCAGGGCAC+GGG | + | chr2_3:48064494-48064513 | Msa0295460:intron | 55.0% | |
| ! | TGTGAGAGCTCTAGTGCACC+GGG | - | chr2_3:48064645-48064664 | None:intergenic | 55.0% |
| GCTCTCACATATGCAGGGTC+CGG | + | chr2_3:48064656-48064675 | Msa0295460:intron | 55.0% | |
| CTCTCACATATGCAGGGTCC+GGG | + | chr2_3:48064657-48064676 | Msa0295460:intron | 55.0% | |
| ACATATGCAGGGTCCGGGAA+GGG | + | chr2_3:48064662-48064681 | Msa0295460:intron | 55.0% | |
| ! | CACAAGAGGCTGTTTCCAGG+AGG | + | chr2_3:48064728-48064747 | Msa0295460:intron | 55.0% |
| !! | GTGAAAGGCATTGGTCCACG+TGG | - | chr2_3:48064803-48064822 | None:intergenic | 55.0% |
| GTGGACCAATGCCTTTCACG+AGG | + | chr2_3:48064804-48064823 | Msa0295460:intron | 55.0% | |
| CGGTGACAACACCTCGTGAA+AGG | - | chr2_3:48064818-48064837 | None:intergenic | 55.0% | |
| TTTGTCTACCTTGGCCACGC+GGG | - | chr2_3:48064875-48064894 | None:intergenic | 55.0% | |
| GTTTGTCTACCTTGGCCACG+CGG | - | chr2_3:48064876-48064895 | None:intergenic | 55.0% | |
| ACTCGGACGATCCTACGAGT+TGG | - | chr2_3:48064906-48064925 | None:intergenic | 55.0% | |
| ! | AACCGATTCCGACGACTCTC+CGG | - | chr2_3:48064955-48064974 | None:intergenic | 55.0% |
| AACCCAGAAAACCGGGTACG+CGG | + | chr2_3:48065051-48065070 | Msa0295460:intron | 55.0% | |
| ! | GGTCGGTTTCGTGAACCGTT+TGG | + | chr2_3:48065073-48065092 | Msa0295460:intron | 55.0% |
| GAACCCGACCCGAAAAGATC+CGG | - | chr2_3:48065117-48065136 | None:intergenic | 55.0% | |
| GTTCTGGTCTGCAGCTGCAT+TGG | + | chr2_3:48065490-48065509 | Msa0295460:intron | 55.0% | |
| TCCCCCGATTCACGATCTCA+TGG | + | chr2_3:48065765-48065784 | Msa0295460:intron | 55.0% | |
| CCCATGAGATCGTGAATCGG+GGG | - | chr2_3:48065769-48065788 | None:intergenic | 55.0% | |
| CCCCCGATTCACGATCTCAT+GGG | + | chr2_3:48065766-48065785 | Msa0295460:intron | 55.0% | |
| GAGTTTGTCTACCTTGCGCG+TGG | + | chr2_3:48065815-48065834 | Msa0295460:intron | 55.0% | |
| GTCACCAAGACACTTCTGGG+TGG | + | chr2_3:48065988-48066007 | Msa0295460:intron | 55.0% | |
| !! | GAACCCACCCAGAAGTGTCT+TGG | - | chr2_3:48065995-48066014 | None:intergenic | 55.0% |
| ! | AAGGAGCTCCCCTCTGAAGA+TGG | - | chr2_3:48066686-48066705 | None:intergenic | 55.0% |
| AGGGGAGCTCCTTGTCTTCT+CGG | + | chr2_3:48066693-48066712 | Msa0295460:intron | 55.0% | |
| AGCTCCTTGTCTTCTCGGGA+AGG | + | chr2_3:48066698-48066717 | Msa0295460:intron | 55.0% | |
| GCTCCTTGTCTTCTCGGGAA+GGG | + | chr2_3:48066699-48066718 | Msa0295460:intron | 55.0% | |
| CTACCCTTCCCGAGAAGACA+AGG | - | chr2_3:48066705-48066724 | None:intergenic | 55.0% | |
| GACTGCAACTGATGGGAGCT+TGG | + | chr2_3:48067390-48067409 | Msa0295460:intron | 55.0% | |
| GCCCAGAATTCGACCAACAC+AGG | - | chr2_3:48067669-48067688 | None:intergenic | 55.0% | |
| TGGTCGAATTCTGGGCTCCA+TGG | + | chr2_3:48067673-48067692 | Msa0295460:CDS | 55.0% | |
| GAATTCTGGGCTCCATGGTG+TGG | + | chr2_3:48067678-48067697 | Msa0295460:CDS | 55.0% | |
| GACCGAGTGAGAGAGACCAG+CGG | - | chr2_3:48063689-48063708 | None:intergenic | 60.0% | |
| CGGCGAGAAGCGACGATAGT+CGG | - | chr2_3:48063809-48063828 | None:intergenic | 60.0% | |
| CGACTATCGTCGCTTCTCGC+CGG | + | chr2_3:48063807-48063826 | Msa0295460:CDS | 60.0% | |
| TTGACTCCGCAGACGAGTGG+CGG | - | chr2_3:48063882-48063901 | None:intergenic | 60.0% | |
| CGCATACGTAGGGTCCGGAA+AGG | - | chr2_3:48064193-48064212 | None:intergenic | 60.0% | |
| CACATATGCAGGGTCCGGGA+AGG | + | chr2_3:48064661-48064680 | Msa0295460:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr2_3:48064663-48064682 | Msa0295460:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr2_3:48064678-48064697 | None:intergenic | 60.0% |
| !! | CACGAGGTGTTGTCACCGTC+AGG | + | chr2_3:48064820-48064839 | Msa0295460:intron | 60.0% |
| ATTCCGACGACTCTCCGGCA+CGG | - | chr2_3:48064950-48064969 | None:intergenic | 60.0% | |
| TGCCGGAGAGTCGTCGGAAT+CGG | + | chr2_3:48064950-48064969 | Msa0295460:intron | 60.0% | |
| ACCCAGAAAACCGGGTACGC+GGG | + | chr2_3:48065052-48065071 | Msa0295460:intron | 60.0% | |
| ! | ACCCGCGTACCCGGTTTTCT+GGG | - | chr2_3:48065056-48065075 | None:intergenic | 60.0% |
| AGAAAACCGGGTACGCGGGT+CGG | + | chr2_3:48065056-48065075 | Msa0295460:intron | 60.0% | |
| GGGGAGCTCCTTGTCTTCTC+GGG | + | chr2_3:48066694-48066713 | Msa0295460:intron | 60.0% | |
| ! | CGCCGCTGGTCTCTCTCACT+CGG | + | chr2_3:48063684-48063703 | Msa0295460:five_prime_UTR | 65.0% |
| GAGGAAACGCGGCAGTGCTC+CGG | - | chr2_3:48063829-48063848 | None:intergenic | 65.0% | |
| ! | GACTGGTCGGAGCTTGAGGC+CGG | - | chr2_3:48063858-48063877 | None:intergenic | 65.0% |
| ! | CGGAGACTGGTCGGAGCTTG+AGG | - | chr2_3:48063862-48063881 | None:intergenic | 65.0% |
| ! | GACGAGTGGCGGAGACTGGT+CGG | - | chr2_3:48063871-48063890 | None:intergenic | 65.0% |
| CAGTCTCCGCCACTCGTCTG+CGG | + | chr2_3:48063873-48063892 | Msa0295460:CDS | 65.0% | |
| ! | GGGTTGACTCCGCAGACGAG+TGG | - | chr2_3:48063885-48063904 | None:intergenic | 65.0% |
| CGGTGGAACCGTCGTGTGTG+AGG | + | chr2_3:48063925-48063944 | Msa0295460:CDS | 65.0% | |
| GCTCCCGCATACGTAGGGTC+CGG | - | chr2_3:48064198-48064217 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr2_3:48064676-48064695 | Msa0295460:intron | 65.0% | |
| ! | GACCCGCGTACCCGGTTTTC+TGG | - | chr2_3:48065057-48065076 | None:intergenic | 65.0% |
| ACGAAACCGACCCGCGTACC+CGG | - | chr2_3:48065065-48065084 | None:intergenic | 65.0% | |
| TCATGCAGTGGCCACGCGCA+AGG | - | chr2_3:48065829-48065848 | None:intergenic | 65.0% | |
| ATGCGGCAGGGACCACACCA+TGG | - | chr2_3:48067693-48067712 | None:intergenic | 65.0% | |
| ! | CGCAGACGAGTGGCGGAGAC+TGG | - | chr2_3:48063875-48063894 | None:intergenic | 70.0% |
| CTCACATCCCCTCGCCGTGC+CGG | + | chr2_3:48064933-48064952 | Msa0295460:intron | 70.0% | |
| ACGACTCTCCGGCACGGCGA+GGG | - | chr2_3:48064944-48064963 | None:intergenic | 70.0% | |
| TCGCCGTGCCGGAGAGTCGT+CGG | + | chr2_3:48064944-48064963 | Msa0295460:intron | 70.0% | |
| CGACTCTCCGGCACGGCGAG+GGG | - | chr2_3:48064943-48064962 | None:intergenic | 75.0% | |
| GACGACTCTCCGGCACGGCG+AGG | - | chr2_3:48064945-48064964 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 48063586 | 48068169 | 48063586 | ID=Msa0295460;Name=Msa0295460 |
| chr2_3 | mRNA | 48063586 | 48068169 | 48063586 | ID=Msa0295460-mRNA-1;Parent=Msa0295460;Name=Msa0295460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=178|1|1|1|1|1|2|243|173 |
| chr2_3 | exon | 48063586 | 48063971 | 48063586 | ID=Msa0295460-mRNA-1:exon:14972;Parent=Msa0295460-mRNA-1 |
| chr2_3 | exon | 48067613 | 48068169 | 48067613 | ID=Msa0295460-mRNA-1:exon:14973;Parent=Msa0295460-mRNA-1 |
| chr2_3 | five_prime_UTR | 48063586 | 48063763 | 48063586 | ID=Msa0295460-mRNA-1:five_prime_utr;Parent=Msa0295460-mRNA-1 |
| chr2_3 | CDS | 48063764 | 48063971 | 48063764 | ID=Msa0295460-mRNA-1:cds;Parent=Msa0295460-mRNA-1 |
| chr2_3 | CDS | 48067613 | 48067926 | 48067613 | ID=Msa0295460-mRNA-1:cds;Parent=Msa0295460-mRNA-1 |
| chr2_3 | three_prime_UTR | 48067927 | 48068169 | 48067927 | ID=Msa0295460-mRNA-1:three_prime_utr;Parent=Msa0295460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
