Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399500 | XP_013470473.1 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399500 | sp|Q9LZ72|KCS19_ARATH | 62.796 | 422 | 137 | 4 | 2 | 420 | 60 | 464 | 0.0 | 563 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399500 | A0A072VS55 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1399500 | 0.803962 | 2.714221e-49 | -8.615850e-47 |
| Msa0030590 | Msa1399500 | 0.800897 | 1.161845e-48 | -8.615850e-47 |
| Msa0055280 | Msa1399500 | 0.841442 | 4.741029e-58 | -8.615850e-47 |
| Msa0094420 | Msa1399500 | 0.803652 | 3.147807e-49 | -8.615850e-47 |
| Msa0101060 | Msa1399500 | 0.830496 | 2.842263e-55 | -8.615850e-47 |
| Msa1358870 | Msa1399500 | -0.801539 | 8.583325e-49 | -8.615850e-47 |
| Msa1363890 | Msa1399500 | 0.803955 | 2.723121e-49 | -8.615850e-47 |
| Msa1373950 | Msa1399500 | 0.838209 | 3.293402e-57 | -8.615850e-47 |
| Msa1397540 | Msa1399500 | 0.806079 | 9.792516e-50 | -8.615850e-47 |
| Msa1399500 | Msa1405470 | 0.808855 | 2.522278e-50 | -8.615850e-47 |
| Msa1399500 | Msa1409750 | 0.995391 | 8.450249e-216 | -8.615850e-47 |
| Msa1399500 | Msa1423080 | 0.819175 | 1.333026e-52 | -8.615850e-47 |
| Msa1399500 | Msa1447160 | -0.850636 | 1.493978e-60 | -8.615850e-47 |
| Msa1399500 | Msa1460310 | -0.813240 | 2.828574e-51 | -8.615850e-47 |
| Msa0620640 | Msa1399500 | 0.844541 | 7.094025e-59 | -8.615850e-47 |
| Msa0621890 | Msa1399500 | 0.818818 | 1.607483e-52 | -8.615850e-47 |
| Msa0623170 | Msa1399500 | 0.998130 | 7.056047e-257 | -8.615850e-47 |
| Msa0646040 | Msa1399500 | -0.800523 | 1.384623e-48 | -8.615850e-47 |
| Msa0678240 | Msa1399500 | 0.824503 | 7.792716e-54 | -8.615850e-47 |
| Msa0701770 | Msa1399500 | 0.806291 | 8.832503e-50 | -8.615850e-47 |
| Msa0703490 | Msa1399500 | 0.803239 | 3.833331e-49 | -8.615850e-47 |
| Msa0714020 | Msa1399500 | 0.800251 | 1.573199e-48 | -8.615850e-47 |
| Msa0721150 | Msa1399500 | 0.842622 | 2.311370e-58 | -8.615850e-47 |
| Msa0730180 | Msa1399500 | 0.805450 | 1.327447e-49 | -8.615850e-47 |
| Msa0734340 | Msa1399500 | 0.817316 | 3.512478e-52 | -8.615850e-47 |
| Msa0739570 | Msa1399500 | 0.803090 | 4.114863e-49 | -8.615850e-47 |
| Msa0740420 | Msa1399500 | 0.801916 | 7.182874e-49 | -8.615850e-47 |
| Msa0744450 | Msa1399500 | 0.808544 | 2.939963e-50 | -8.615850e-47 |
| Msa0752580 | Msa1399500 | 0.803077 | 4.141480e-49 | -8.615850e-47 |
| Msa0754500 | Msa1399500 | 0.801974 | 6.990164e-49 | -8.615850e-47 |
| Msa0756480 | Msa1399500 | 0.817350 | 3.451509e-52 | -8.615850e-47 |
| Msa0761760 | Msa1399500 | 0.838891 | 2.195911e-57 | -8.615850e-47 |
| Msa0772150 | Msa1399500 | 0.802136 | 6.474671e-49 | -8.615850e-47 |
| Msa0792510 | Msa1399500 | 0.836668 | 8.178195e-57 | -8.615850e-47 |
| Msa0804060 | Msa1399500 | 0.837649 | 4.587910e-57 | -8.615850e-47 |
| Msa0820670 | Msa1399500 | 0.806492 | 8.011128e-50 | -8.615850e-47 |
| Msa0830900 | Msa1399500 | 0.813818 | 2.110812e-51 | -8.615850e-47 |
| Msa0835510 | Msa1399500 | 0.819717 | 1.003220e-52 | -8.615850e-47 |
| Msa0842050 | Msa1399500 | 0.805656 | 1.201490e-49 | -8.615850e-47 |
| Msa0842240 | Msa1399500 | 0.834568 | 2.779379e-56 | -8.615850e-47 |
| Msa0139720 | Msa1399500 | -0.809343 | 1.982675e-50 | -8.615850e-47 |
| Msa0140910 | Msa1399500 | 0.815093 | 1.102903e-51 | -8.615850e-47 |
| Msa0164660 | Msa1399500 | 0.806982 | 6.314348e-50 | -8.615850e-47 |
| Msa0165430 | Msa1399500 | 0.800551 | 1.366906e-48 | -8.615850e-47 |
| Msa0169960 | Msa1399500 | 0.811127 | 8.176937e-51 | -8.615850e-47 |
| Msa0197750 | Msa1399500 | -0.830939 | 2.213429e-55 | -8.615850e-47 |
| Msa0208390 | Msa1399500 | 0.803776 | 2.966117e-49 | -8.615850e-47 |
| Msa0211010 | Msa1399500 | 0.819976 | 8.754185e-53 | -8.615850e-47 |
| Msa0213080 | Msa1399500 | 0.842984 | 1.851362e-58 | -8.615850e-47 |
| Msa0213090 | Msa1399500 | 0.821494 | 3.919659e-53 | -8.615850e-47 |
| Msa0219660 | Msa1399500 | 0.814579 | 1.434057e-51 | -8.615850e-47 |
| Msa0227800 | Msa1399500 | 0.805360 | 1.386421e-49 | -8.615850e-47 |
| Msa0232860 | Msa1399500 | 0.819659 | 1.033911e-52 | -8.615850e-47 |
| Msa1226600 | Msa1399500 | 0.803647 | 3.155096e-49 | -8.615850e-47 |
| Msa1226640 | Msa1399500 | 0.820994 | 5.110994e-53 | -8.615850e-47 |
| Msa1238480 | Msa1399500 | 0.827350 | 1.642267e-54 | -8.615850e-47 |
| Msa1243130 | Msa1399500 | 0.825868 | 3.706675e-54 | -8.615850e-47 |
| Msa1254470 | Msa1399500 | 0.834657 | 2.640629e-56 | -8.615850e-47 |
| Msa1254770 | Msa1399500 | 0.823260 | 1.524378e-53 | -8.615850e-47 |
| Msa1254800 | Msa1399500 | 0.816837 | 4.501359e-52 | -8.615850e-47 |
| Msa1258280 | Msa1399500 | 0.806222 | 9.134005e-50 | -8.615850e-47 |
| Msa1279860 | Msa1399500 | 0.806299 | 8.800952e-50 | -8.615850e-47 |
| Msa1295010 | Msa1399500 | 0.812440 | 4.234571e-51 | -8.615850e-47 |
| Msa1298290 | Msa1399500 | 0.810192 | 1.302714e-50 | -8.615850e-47 |
| Msa1300090 | Msa1399500 | 0.825011 | 5.913766e-54 | -8.615850e-47 |
| Msa1302150 | Msa1399500 | 0.801761 | 7.731956e-49 | -8.615850e-47 |
| Msa1326000 | Msa1399500 | 0.800344 | 1.506272e-48 | -8.615850e-47 |
| Msa1329990 | Msa1399500 | 0.817219 | 3.694681e-52 | -8.615850e-47 |
| Msa1337190 | Msa1399500 | 0.807863 | 4.106058e-50 | -8.615850e-47 |
| Msa1337340 | Msa1399500 | 0.807558 | 4.766374e-50 | -8.615850e-47 |
| Msa0365360 | Msa1399500 | 0.806507 | 7.956099e-50 | -8.615850e-47 |
| Msa0371610 | Msa1399500 | 0.843288 | 1.536697e-58 | -8.615850e-47 |
| Msa0409820 | Msa1399500 | 0.811963 | 5.383370e-51 | -8.615850e-47 |
| Msa0413740 | Msa1399500 | 0.812928 | 3.312298e-51 | -8.615850e-47 |
| Msa0418000 | Msa1399500 | 0.807905 | 4.022726e-50 | -8.615850e-47 |
| Msa0420070 | Msa1399500 | 0.830402 | 2.996475e-55 | -8.615850e-47 |
| Msa0442880 | Msa1399500 | 0.822592 | 2.181646e-53 | -8.615850e-47 |
| Msa0455260 | Msa1399500 | 0.804337 | 2.267648e-49 | -8.615850e-47 |
| Msa0458790 | Msa1399500 | 0.806687 | 7.286808e-50 | -8.615850e-47 |
| Msa0466100 | Msa1399500 | 0.827067 | 1.919272e-54 | -8.615850e-47 |
| Msa0467920 | Msa1399500 | -0.844434 | 7.580961e-59 | -8.615850e-47 |
| Msa0994660 | Msa1399500 | 0.830153 | 3.447120e-55 | -8.615850e-47 |
| Msa1009000 | Msa1399500 | 0.820186 | 7.835666e-53 | -8.615850e-47 |
| Msa1018720 | Msa1399500 | 0.809041 | 2.302352e-50 | -8.615850e-47 |
| Msa1032350 | Msa1399500 | 0.804179 | 2.445444e-49 | -8.615850e-47 |
| Msa1036390 | Msa1399500 | 0.811748 | 5.996074e-51 | -8.615850e-47 |
| Msa1044040 | Msa1399500 | 0.807457 | 5.006888e-50 | -8.615850e-47 |
| Msa1069300 | Msa1399500 | 0.807775 | 4.286585e-50 | -8.615850e-47 |
| Msa1072350 | Msa1399500 | 0.804885 | 1.742638e-49 | -8.615850e-47 |
| Msa1076680 | Msa1399500 | 0.814460 | 1.523084e-51 | -8.615850e-47 |
| Msa1081600 | Msa1399500 | 0.840220 | 9.912977e-58 | -8.615850e-47 |
| Msa0253370 | Msa1399500 | 0.846685 | 1.859348e-59 | -8.615850e-47 |
| Msa0260970 | Msa1399500 | 0.806276 | 8.900776e-50 | -8.615850e-47 |
| Msa0264940 | Msa1399500 | -0.810807 | 9.590401e-51 | -8.615850e-47 |
| Msa0277280 | Msa1399500 | -0.833398 | 5.455343e-56 | -8.615850e-47 |
| Msa0282590 | Msa1399500 | 0.805685 | 1.184820e-49 | -8.615850e-47 |
| Msa0288320 | Msa1399500 | 0.806695 | 7.261045e-50 | -8.615850e-47 |
| Msa0290950 | Msa1399500 | 0.827360 | 1.633342e-54 | -8.615850e-47 |
| Msa0290970 | Msa1399500 | 0.825659 | 4.153951e-54 | -8.615850e-47 |
| Msa0292180 | Msa1399500 | 0.841508 | 4.554628e-58 | -8.615850e-47 |
| Msa0302990 | Msa1399500 | -0.813890 | 2.035206e-51 | -8.615850e-47 |
| Msa0304990 | Msa1399500 | 0.850249 | 1.918691e-60 | -8.615850e-47 |
| Msa0306130 | Msa1399500 | 0.811850 | 5.696120e-51 | -8.615850e-47 |
| Msa0330400 | Msa1399500 | 0.842292 | 2.826395e-58 | -8.615850e-47 |
| Msa0351230 | Msa1399500 | 0.806439 | 8.222628e-50 | -8.615850e-47 |
| Msa1118140 | Msa1399500 | 0.805200 | 1.497180e-49 | -8.615850e-47 |
| Msa1125040 | Msa1399500 | 0.809167 | 2.162862e-50 | -8.615850e-47 |
| Msa1132560 | Msa1399500 | -0.810306 | 1.230788e-50 | -8.615850e-47 |
| Msa1151960 | Msa1399500 | 0.804681 | 1.921980e-49 | -8.615850e-47 |
| Msa1159360 | Msa1399500 | 0.812331 | 4.473115e-51 | -8.615850e-47 |
| Msa1166370 | Msa1399500 | 0.837039 | 6.574653e-57 | -8.615850e-47 |
| Msa1167400 | Msa1399500 | 0.811341 | 7.349770e-51 | -8.615850e-47 |
| Msa1201610 | Msa1399500 | 0.803513 | 3.363248e-49 | -8.615850e-47 |
| Msa1201990 | Msa1399500 | 0.814367 | 1.597226e-51 | -8.615850e-47 |
| Msa1213020 | Msa1399500 | 0.824610 | 7.352218e-54 | -8.615850e-47 |
| Msa1214900 | Msa1399500 | 0.800918 | 1.150273e-48 | -8.615850e-47 |
| Msa1217900 | Msa1399500 | -0.800022 | 1.751564e-48 | -8.615850e-47 |
| Msa1220230 | Msa1399500 | 0.803856 | 2.855236e-49 | -8.615850e-47 |
| Msa1221200 | Msa1399500 | -0.803283 | 3.753158e-49 | -8.615850e-47 |
| Msa1221260 | Msa1399500 | 0.825872 | 3.699492e-54 | -8.615850e-47 |
| Msa0490480 | Msa1399500 | 0.808785 | 2.611228e-50 | -8.615850e-47 |
| Msa0502500 | Msa1399500 | 0.833634 | 4.765479e-56 | -8.615850e-47 |
| Msa0505390 | Msa1399500 | 0.811743 | 6.010348e-51 | -8.615850e-47 |
| Msa0511890 | Msa1399500 | 0.806518 | 7.912434e-50 | -8.615850e-47 |
| Msa0514330 | Msa1399500 | -0.819082 | 1.399952e-52 | -8.615850e-47 |
| Msa0531990 | Msa1399500 | -0.807173 | 5.752547e-50 | -8.615850e-47 |
| Msa0532100 | Msa1399500 | -0.806783 | 6.956649e-50 | -8.615850e-47 |
| Msa0565490 | Msa1399500 | 0.807508 | 4.885558e-50 | -8.615850e-47 |
| Msa0575250 | Msa1399500 | 0.812637 | 3.836030e-51 | -8.615850e-47 |
| Msa0581340 | Msa1399500 | 0.824516 | 7.738017e-54 | -8.615850e-47 |
| Msa0583590 | Msa1399500 | 0.806414 | 8.322441e-50 | -8.615850e-47 |
| Msa0599250 | Msa1399500 | 0.807593 | 4.685771e-50 | -8.615850e-47 |
| Msa0853860 | Msa1399500 | 0.836139 | 1.114958e-56 | -8.615850e-47 |
| Msa0855520 | Msa1399500 | 0.810994 | 8.739392e-51 | -8.615850e-47 |
| Msa0860270 | Msa1399500 | 0.811649 | 6.298660e-51 | -8.615850e-47 |
| Msa0864950 | Msa1399500 | 0.819252 | 1.280743e-52 | -8.615850e-47 |
| Msa0880080 | Msa1399500 | 0.819602 | 1.065417e-52 | -8.615850e-47 |
| Msa0903730 | Msa1399500 | 0.811197 | 7.895851e-51 | -8.615850e-47 |
| Msa0921630 | Msa1399500 | 0.846822 | 1.706055e-59 | -8.615850e-47 |
| Msa0951720 | Msa1399500 | 0.813433 | 2.565789e-51 | -8.615850e-47 |
| Msa0960270 | Msa1399500 | 0.843150 | 1.672484e-58 | -8.615850e-47 |
| Msa0973230 | Msa1399500 | 0.826171 | 3.140637e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399500 | MtrunA17_Chr1g0212951 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Msa1399500 | MtrunA17_Chr4g0030591 | 56.341 | 410 | 171 | 1 | 2 | 411 | 58 | 459 | 3.13e-176 | 501 |
| Msa1399500 | MtrunA17_Chr4g0030581 | 57.561 | 410 | 165 | 1 | 2 | 411 | 58 | 458 | 1.11e-174 | 496 |
| Msa1399500 | MtrunA17_Chr4g0030601 | 56.341 | 410 | 162 | 2 | 2 | 411 | 58 | 450 | 1.34e-174 | 496 |
| Msa1399500 | MtrunA17_Chr2g0327721 | 55.396 | 417 | 164 | 4 | 3 | 411 | 59 | 461 | 6.60e-167 | 477 |
| Msa1399500 | MtrunA17_Chr7g0276251 | 42.640 | 394 | 200 | 4 | 6 | 394 | 153 | 525 | 4.38e-111 | 337 |
| Msa1399500 | MtrunA17_Chr4g0035081 | 42.025 | 395 | 201 | 4 | 9 | 399 | 134 | 504 | 1.48e-107 | 327 |
| Msa1399500 | MtrunA17_Chr5g0423521 | 42.188 | 384 | 198 | 4 | 13 | 394 | 126 | 487 | 8.03e-106 | 322 |
| Msa1399500 | MtrunA17_Chr1g0209881 | 41.667 | 384 | 200 | 5 | 13 | 394 | 126 | 487 | 1.65e-105 | 321 |
| Msa1399500 | MtrunA17_Chr1g0188051 | 41.388 | 389 | 203 | 4 | 9 | 394 | 137 | 503 | 4.34e-104 | 318 |
| Msa1399500 | MtrunA17_Chr2g0306781 | 41.860 | 387 | 200 | 4 | 13 | 396 | 34 | 398 | 1.59e-103 | 313 |
| Msa1399500 | MtrunA17_Chr1g0166191 | 40.360 | 389 | 207 | 5 | 9 | 394 | 143 | 509 | 9.40e-101 | 310 |
| Msa1399500 | MtrunA17_Chr3g0136561 | 40.415 | 386 | 213 | 4 | 13 | 394 | 528 | 900 | 1.41e-100 | 319 |
| Msa1399500 | MtrunA17_Chr4g0063011 | 40.153 | 391 | 209 | 4 | 9 | 396 | 125 | 493 | 4.22e-100 | 307 |
| Msa1399500 | MtrunA17_Chr2g0277841 | 38.677 | 393 | 216 | 4 | 5 | 394 | 78 | 448 | 8.95e-96 | 295 |
| Msa1399500 | MtrunA17_Chr6g0480561 | 37.722 | 395 | 216 | 6 | 9 | 397 | 98 | 468 | 5.46e-94 | 291 |
| Msa1399500 | MtrunA17_Chr2g0295781 | 37.028 | 397 | 218 | 6 | 9 | 398 | 81 | 452 | 1.80e-92 | 286 |
| Msa1399500 | MtrunA17_Chr1g0204301 | 38.303 | 389 | 216 | 4 | 9 | 394 | 116 | 483 | 5.17e-84 | 265 |
| Msa1399500 | MtrunA17_Chr3g0115021 | 38.035 | 397 | 214 | 7 | 9 | 399 | 117 | 487 | 3.12e-83 | 263 |
| Msa1399500 | MtrunA17_Chr3g0115041 | 38.035 | 397 | 214 | 7 | 9 | 399 | 117 | 487 | 3.47e-83 | 263 |
| Msa1399500 | MtrunA17_Chr7g0276241 | 40.909 | 308 | 151 | 3 | 92 | 394 | 2 | 283 | 1.36e-82 | 255 |
| Msa1399500 | MtrunA17_Chr7g0250661 | 40.584 | 308 | 159 | 3 | 92 | 396 | 2 | 288 | 4.86e-81 | 251 |
| Msa1399500 | MtrunA17_Chr6g0469631 | 38.539 | 397 | 212 | 7 | 9 | 399 | 116 | 486 | 1.57e-79 | 254 |
| Msa1399500 | MtrunA17_Chr2g0282281 | 35.356 | 379 | 220 | 3 | 2 | 380 | 139 | 492 | 1.29e-78 | 252 |
| Msa1399500 | MtrunA17_Chr6g0461631 | 37.132 | 272 | 147 | 4 | 126 | 394 | 3 | 253 | 1.55e-58 | 192 |
| Msa1399500 | MtrunA17_Chr4g0026871 | 37.349 | 249 | 127 | 5 | 154 | 396 | 1 | 226 | 6.97e-53 | 176 |
| Msa1399500 | MtrunA17_Chr4g0026791 | 36.634 | 202 | 102 | 4 | 154 | 352 | 1 | 179 | 1.50e-37 | 134 |
| Msa1399500 | MtrunA17_Chr4g0026721 | 35.000 | 180 | 89 | 4 | 223 | 397 | 3 | 159 | 7.25e-32 | 119 |
| Msa1399500 | MtrunA17_Chr6g0461621 | 39.231 | 130 | 75 | 2 | 2 | 128 | 91 | 219 | 9.95e-23 | 96.3 |
| Msa1399500 | MtrunA17_Chr4g0026861 | 34.677 | 124 | 80 | 1 | 5 | 128 | 92 | 214 | 1.53e-21 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399500 | AT5G04530.1 | 62.796 | 422 | 137 | 4 | 2 | 420 | 60 | 464 | 0.0 | 563 |
| Msa1399500 | AT2G28630.2 | 56.145 | 415 | 170 | 3 | 2 | 412 | 58 | 464 | 1.20e-170 | 487 |
| Msa1399500 | AT2G28630.1 | 56.145 | 415 | 170 | 3 | 2 | 412 | 58 | 464 | 1.20e-170 | 487 |
| Msa1399500 | AT1G07720.1 | 55.238 | 420 | 169 | 4 | 1 | 412 | 57 | 465 | 8.87e-165 | 472 |
| Msa1399500 | AT1G07720.2 | 55.238 | 420 | 169 | 4 | 1 | 412 | 100 | 508 | 1.40e-164 | 473 |
| Msa1399500 | AT2G15090.1 | 41.860 | 387 | 195 | 5 | 13 | 394 | 115 | 476 | 3.31e-107 | 325 |
| Msa1399500 | AT1G01120.1 | 42.105 | 380 | 190 | 5 | 21 | 394 | 168 | 523 | 5.98e-107 | 326 |
| Msa1399500 | AT1G19440.1 | 40.874 | 389 | 200 | 6 | 11 | 394 | 148 | 511 | 3.04e-106 | 324 |
| Msa1399500 | AT2G46720.1 | 39.386 | 391 | 210 | 4 | 9 | 394 | 94 | 462 | 3.35e-106 | 322 |
| Msa1399500 | AT4G34510.1 | 41.602 | 387 | 203 | 4 | 10 | 394 | 117 | 482 | 4.44e-106 | 323 |
| Msa1399500 | AT4G34250.1 | 42.377 | 387 | 193 | 6 | 13 | 394 | 123 | 484 | 4.85e-105 | 320 |
| Msa1399500 | AT2G16280.1 | 41.192 | 386 | 203 | 4 | 11 | 394 | 144 | 507 | 3.08e-104 | 318 |
| Msa1399500 | AT1G25450.1 | 40.885 | 384 | 203 | 5 | 13 | 394 | 122 | 483 | 3.53e-103 | 315 |
| Msa1399500 | AT1G68530.1 | 40.365 | 384 | 205 | 5 | 13 | 394 | 127 | 488 | 6.45e-102 | 312 |
| Msa1399500 | AT4G34520.1 | 40.827 | 387 | 200 | 5 | 13 | 394 | 125 | 487 | 7.67e-102 | 312 |
| Msa1399500 | AT2G26250.1 | 39.340 | 394 | 230 | 4 | 9 | 394 | 155 | 547 | 2.05e-101 | 313 |
| Msa1399500 | AT1G04220.1 | 40.247 | 405 | 209 | 8 | 2 | 394 | 129 | 512 | 1.88e-100 | 309 |
| Msa1399500 | AT3G10280.1 | 38.107 | 391 | 208 | 5 | 9 | 394 | 94 | 455 | 3.10e-99 | 304 |
| Msa1399500 | AT2G26640.1 | 40.360 | 389 | 207 | 4 | 9 | 394 | 134 | 500 | 6.21e-99 | 305 |
| Msa1399500 | AT5G43760.1 | 39.851 | 404 | 211 | 6 | 2 | 394 | 135 | 517 | 1.07e-98 | 305 |
| Msa1399500 | AT1G71160.1 | 39.175 | 388 | 211 | 5 | 9 | 394 | 81 | 445 | 1.25e-95 | 295 |
| Msa1399500 | AT5G49070.1 | 37.811 | 402 | 219 | 5 | 6 | 399 | 82 | 460 | 2.86e-91 | 284 |
| Msa1399500 | AT3G52160.2 | 30.846 | 402 | 212 | 5 | 1 | 402 | 1 | 336 | 1.64e-67 | 218 |
| Msa1399500 | AT3G52160.1 | 31.579 | 380 | 207 | 4 | 1 | 380 | 114 | 440 | 3.48e-66 | 218 |
| Msa1399500 | AT1G68530.2 | 38.645 | 251 | 152 | 2 | 13 | 263 | 127 | 375 | 2.39e-59 | 198 |
| Msa1399500 | AT5G49070.2 | 37.021 | 235 | 141 | 2 | 6 | 237 | 82 | 312 | 4.48e-44 | 156 |
Find 69 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCAAAGATTCTCCCATTT+TGG | 0.117044 | tig0022368:-36214 | Msa1399500:CDS |
| CCTCCCAACATATTAAATTT+AGG | 0.181690 | tig0022368:+36086 | None:intergenic |
| CTTCCTTCAAGAACGTTTCT+TGG | 0.199155 | tig0022368:+36833 | None:intergenic |
| TCCCAAAATGGGAGAATCTT+TGG | 0.263372 | tig0022368:+36212 | None:intergenic |
| GACAGTAAATTTACAGTCTA+TGG | 0.278528 | tig0022368:-36237 | Msa1399500:CDS |
| AAAGGATTATTGAGTGTATC+TGG | 0.291860 | tig0022368:+35738 | None:intergenic |
| ATACTTCTGCTGGTGGATTA+TGG | 0.292782 | tig0022368:-35923 | Msa1399500:CDS |
| AGCAGATTTAACAAGACTTT+TGG | 0.328960 | tig0022368:+36271 | None:intergenic |
| AACCTGACCAGTTCCCAAAA+TGG | 0.338184 | tig0022368:+36200 | None:intergenic |
| TTAAGTGTAATAATTGTGTT+TGG | 0.339072 | tig0022368:-35821 | Msa1399500:CDS |
| GGTGGTAGGGCAGTTATTGA+TGG | 0.340936 | tig0022368:-36017 | Msa1399500:CDS |
| GTCTTCAATCTTGCAGGAAT+GGG | 0.346369 | tig0022368:-36611 | Msa1399500:CDS |
| AGTTATTGATGGGGTTGGTA+AGG | 0.349662 | tig0022368:-36006 | Msa1399500:CDS |
| GTAAAAGTCTTCAATCTTGC+AGG | 0.353247 | tig0022368:-36617 | Msa1399500:CDS |
| CTTAAAACCATGGTTAGTTC+AGG | 0.363565 | tig0022368:-36878 | Msa1399500:CDS |
| ATTTGTCTGATACTAATGTT+TGG | 0.369574 | tig0022368:-35785 | Msa1399500:CDS |
| AAACCTAAATTTAATATGTT+GGG | 0.383049 | tig0022368:-36089 | Msa1399500:CDS |
| CCCAAAATGGGAGAATCTTT+GGG | 0.386365 | tig0022368:+36213 | None:intergenic |
| AAAACCTAAATTTAATATGT+TGG | 0.386628 | tig0022368:-36090 | Msa1399500:CDS |
| TAGGATGGCACTTCATCGTT+GGG | 0.405904 | tig0022368:-35949 | Msa1399500:CDS |
| TTGATGATTAGTCTTGGAGC+TGG | 0.423250 | tig0022368:-35846 | Msa1399500:CDS |
| AAAACATATGAAAATTCCCT+TGG | 0.437613 | tig0022368:-36542 | Msa1399500:CDS |
| CAGAAGATCTTGGCTCTCAT+TGG | 0.438630 | tig0022368:-36505 | Msa1399500:CDS |
| GTTATTGATGGGGTTGGTAA+GGG | 0.442438 | tig0022368:-36005 | Msa1399500:CDS |
| ACCTGACCAGTTCCCAAAAT+GGG | 0.447146 | tig0022368:+36201 | None:intergenic |
| GTGGTAGGGCAGTTATTGAT+GGG | 0.447295 | tig0022368:-36016 | Msa1399500:CDS |
| ATATCTTAGCTTTGTGAGGT+TGG | 0.447838 | tig0022368:-35685 | Msa1399500:CDS |
| TTGTGTTTGGGAAGTTATGA+AGG | 0.449292 | tig0022368:-35808 | Msa1399500:CDS |
| TGTCCAAGAAACGTTCTTGA+AGG | 0.449388 | tig0022368:-36836 | Msa1399500:CDS |
| TTTGTGTTCATCCTGGTGGT+AGG | 0.458457 | tig0022368:-36031 | Msa1399500:CDS |
| TCATATGTGTCTTTAAGAGT+TGG | 0.461513 | tig0022368:+36800 | None:intergenic |
| AGAGGCTTAAGAAAGGTGAT+AGG | 0.463294 | tig0022368:-35872 | Msa1399500:CDS |
| CATGTGTTTCAGTTTCAAGA+TGG | 0.463864 | tig0022368:+36382 | None:intergenic |
| TAAATTTAATATGTTGGGAG+GGG | 0.470603 | tig0022368:-36084 | Msa1399500:CDS |
| TAAGTGTAATAATTGTGTTT+GGG | 0.472156 | tig0022368:-35820 | Msa1399500:CDS |
| CGATGAAGTGCCATCCTAGC+TGG | 0.483902 | tig0022368:+35954 | None:intergenic |
| AGTCTTCAATCTTGCAGGAA+TGG | 0.484453 | tig0022368:-36612 | Msa1399500:CDS |
| CACATGGAAAGAACACAGTA+TGG | 0.488505 | tig0022368:-36365 | Msa1399500:CDS |
| TTGTGTTCATCCTGGTGGTA+GGG | 0.491562 | tig0022368:-36030 | Msa1399500:CDS |
| CTAGGATGGCACTTCATCGT+TGG | 0.495311 | tig0022368:-35950 | Msa1399500:CDS |
| CGTTGGGGTAATACTTCTGC+TGG | 0.498272 | tig0022368:-35933 | Msa1399500:CDS |
| TGATGATTAGTCTTGGAGCT+GGG | 0.508912 | tig0022368:-35845 | Msa1399500:CDS |
| ACCATGGTTAGTTCAGGAAT+CGG | 0.511336 | tig0022368:-36872 | Msa1399500:CDS |
| TGATCTTGAGCCAGCTAGGA+TGG | 0.522671 | tig0022368:-35964 | Msa1399500:CDS |
| GTTGTGAGCACAGAAGATCT+TGG | 0.526835 | tig0022368:-36515 | Msa1399500:CDS |
| AAATTTAATATGTTGGGAGG+GGG | 0.527603 | tig0022368:-36083 | Msa1399500:CDS |
| CCTAAATTTAATATGTTGGG+AGG | 0.527989 | tig0022368:-36086 | Msa1399500:CDS |
| CTAAATTTAATATGTTGGGA+GGG | 0.529020 | tig0022368:-36085 | Msa1399500:CDS |
| ATTATTCTTGCTGTGAGTGA+AGG | 0.536137 | tig0022368:+36665 | None:intergenic |
| AATATGATCTTGAGCCAGCT+AGG | 0.540062 | tig0022368:-35968 | Msa1399500:CDS |
| CTGTGCTCACAACAATTCCA+AGG | 0.544367 | tig0022368:+36525 | None:intergenic |
| TTACAATTGTTGCATACAAG+TGG | 0.555295 | tig0022368:-36327 | Msa1399500:CDS |
| AGGGCAGTTATTGATGGGGT+TGG | 0.556135 | tig0022368:-36011 | Msa1399500:CDS |
| ATACAAGTGGAAGATGAAGA+AGG | 0.560414 | tig0022368:-36314 | Msa1399500:CDS |
| TAGATTCCTCCTTAAAACCA+TGG | 0.562273 | tig0022368:-36888 | Msa1399500:CDS |
| TGGGGTAATACTTCTGCTGG+TGG | 0.565909 | tig0022368:-35930 | Msa1399500:CDS |
| TCAATAACTGCCCTACCACC+AGG | 0.573692 | tig0022368:+36020 | None:intergenic |
| ACAAGAATGTCTATTTCTGA+AGG | 0.580320 | tig0022368:+36716 | None:intergenic |
| CTTGCTGTGAGTGAAGGTGC+TGG | 0.586342 | tig0022368:+36671 | None:intergenic |
| ATCTAAATTCCTCAAGACCT+AGG | 0.588769 | tig0022368:+36906 | None:intergenic |
| ACCGATTCCTGAACTAACCA+TGG | 0.589832 | tig0022368:+36871 | None:intergenic |
| ATGAATATCTTAGCTTTGTG+AGG | 0.604029 | tig0022368:-35689 | Msa1399500:CDS |
| CTTGGCTCTCATTGGTACTG+TGG | 0.621208 | tig0022368:-36497 | Msa1399500:CDS |
| TCTTCAATCTTGCAGGAATG+GGG | 0.635113 | tig0022368:-36610 | Msa1399500:CDS |
| CATCTTGAAACTGAAACACA+TGG | 0.639110 | tig0022368:-36381 | Msa1399500:CDS |
| TGGTAGGGCAGTTATTGATG+GGG | 0.644981 | tig0022368:-36015 | Msa1399500:CDS |
| TGTGCTCACAACAATTCCAA+GGG | 0.652013 | tig0022368:+36526 | None:intergenic |
| AGGATGGCACTTCATCGTTG+GGG | 0.671813 | tig0022368:-35948 | Msa1399500:CDS |
| GGATTATTGAGTGTATCTGG+AGG | 0.693373 | tig0022368:+35741 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACCTAAATTTAATATGT+TGG | - | tig0022368:36489-36508 | Msa1399500:CDS | 15.0% |
| !! | AAACCTAAATTTAATATGTT+GGG | - | tig0022368:36490-36509 | Msa1399500:CDS | 15.0% |
| !! | AAAACCTAAATTTAATATGT+TGG | - | tig0022368:36489-36508 | Msa1399500:CDS | 15.0% |
| !! | AAACCTAAATTTAATATGTT+GGG | - | tig0022368:36490-36509 | Msa1399500:CDS | 15.0% |
| !! | AGTATGAAAAAAGTTGAATT+TGG | - | tig0022368:36424-36443 | Msa1399500:CDS | 20.0% |
| !!! | TTTATTTTGTTTTTGAACCT+TGG | - | tig0022368:36454-36473 | Msa1399500:CDS | 20.0% |
| !! | TTAAGTGTAATAATTGTGTT+TGG | - | tig0022368:36758-36777 | Msa1399500:CDS | 20.0% |
| !! | TAAGTGTAATAATTGTGTTT+GGG | - | tig0022368:36759-36778 | Msa1399500:CDS | 20.0% |
| !!! | CAATTATACTTTTCCTTAAA+AGG | + | tig0022368:36862-36881 | None:intergenic | 20.0% |
| !!! | CTTTTAAGGAAAAGTATAAT+TGG | - | tig0022368:36860-36879 | Msa1399500:CDS | 20.0% |
| !! | AGTATGAAAAAAGTTGAATT+TGG | - | tig0022368:36424-36443 | Msa1399500:CDS | 20.0% |
| !!! | TTTATTTTGTTTTTGAACCT+TGG | - | tig0022368:36454-36473 | Msa1399500:CDS | 20.0% |
| !! | TTAAGTGTAATAATTGTGTT+TGG | - | tig0022368:36758-36777 | Msa1399500:CDS | 20.0% |
| !! | TAAGTGTAATAATTGTGTTT+GGG | - | tig0022368:36759-36778 | Msa1399500:CDS | 20.0% |
| !!! | CAATTATACTTTTCCTTAAA+AGG | + | tig0022368:36862-36881 | None:intergenic | 20.0% |
| !!! | CTTTTAAGGAAAAGTATAAT+TGG | - | tig0022368:36860-36879 | Msa1399500:CDS | 20.0% |
| !!! | AGAAACATGTTTTTTTGAAG+AGG | + | tig0022368:35841-35860 | None:intergenic | 25.0% |
| ! | AAAACATATGAAAATTCCCT+TGG | - | tig0022368:36037-36056 | Msa1399500:CDS | 25.0% |
| !! | GTTTTATAACCATTTTACCA+AGG | + | tig0022368:36474-36493 | None:intergenic | 25.0% |
| ! | CTAAATTTAATATGTTGGGA+GGG | - | tig0022368:36494-36513 | Msa1399500:CDS | 25.0% |
| ! | TAAATTTAATATGTTGGGAG+GGG | - | tig0022368:36495-36514 | Msa1399500:CDS | 25.0% |
| !!! | ATGGTATGTTTTAGGTTATA+TGG | - | tig0022368:36675-36694 | Msa1399500:CDS | 25.0% |
| ! | ATTTGTCTGATACTAATGTT+TGG | - | tig0022368:36794-36813 | Msa1399500:CDS | 25.0% |
| !! | TACACTCAATAATCCTTTTA+AGG | - | tig0022368:36846-36865 | Msa1399500:CDS | 25.0% |
| !!! | AGAAACATGTTTTTTTGAAG+AGG | + | tig0022368:35841-35860 | None:intergenic | 25.0% |
| ! | AAAACATATGAAAATTCCCT+TGG | - | tig0022368:36037-36056 | Msa1399500:CDS | 25.0% |
| !! | GTTTTATAACCATTTTACCA+AGG | + | tig0022368:36474-36493 | None:intergenic | 25.0% |
| ! | CTAAATTTAATATGTTGGGA+GGG | - | tig0022368:36494-36513 | Msa1399500:CDS | 25.0% |
| ! | TAAATTTAATATGTTGGGAG+GGG | - | tig0022368:36495-36514 | Msa1399500:CDS | 25.0% |
| !!! | ATGGTATGTTTTAGGTTATA+TGG | - | tig0022368:36675-36694 | Msa1399500:CDS | 25.0% |
| ! | ATTTGTCTGATACTAATGTT+TGG | - | tig0022368:36794-36813 | Msa1399500:CDS | 25.0% |
| !! | TACACTCAATAATCCTTTTA+AGG | - | tig0022368:36846-36865 | Msa1399500:CDS | 25.0% |
| ! | TCATATGTGTCTTTAAGAGT+TGG | + | tig0022368:35782-35801 | None:intergenic | 30.0% |
| !! | ACAAGAATGTCTATTTCTGA+AGG | + | tig0022368:35866-35885 | None:intergenic | 30.0% |
| !!! | TGTTTTGTTTGTGAAAAGCA+TGG | + | tig0022368:36161-36180 | None:intergenic | 30.0% |
| TTACAATTGTTGCATACAAG+TGG | - | tig0022368:36252-36271 | Msa1399500:CDS | 30.0% | |
| ! | AGCAGATTTAACAAGACTTT+TGG | + | tig0022368:36311-36330 | None:intergenic | 30.0% |
| GACAGTAAATTTACAGTCTA+TGG | - | tig0022368:36342-36361 | Msa1399500:CDS | 30.0% | |
| ! | GTTTTTGAACCTTGGTAAAA+TGG | - | tig0022368:36462-36481 | Msa1399500:CDS | 30.0% |
| CCTCCCAACATATTAAATTT+AGG | + | tig0022368:36496-36515 | None:intergenic | 30.0% | |
| CCTAAATTTAATATGTTGGG+AGG | - | tig0022368:36493-36512 | Msa1399500:CDS | 30.0% | |
| AAATTTAATATGTTGGGAGG+GGG | - | tig0022368:36496-36515 | Msa1399500:CDS | 30.0% | |
| GTTATATGGAAGCAAAAAAG+AGG | - | tig0022368:36689-36708 | Msa1399500:CDS | 30.0% | |
| !!! | AGGATTTTGATGATTAGTCT+TGG | - | tig0022368:36727-36746 | Msa1399500:CDS | 30.0% |
| AAAGGATTATTGAGTGTATC+TGG | + | tig0022368:36844-36863 | None:intergenic | 30.0% | |
| !! | ATGAATATCTTAGCTTTGTG+AGG | - | tig0022368:36890-36909 | Msa1399500:CDS | 30.0% |
| ! | TCATATGTGTCTTTAAGAGT+TGG | + | tig0022368:35782-35801 | None:intergenic | 30.0% |
| !! | ACAAGAATGTCTATTTCTGA+AGG | + | tig0022368:35866-35885 | None:intergenic | 30.0% |
| !!! | TGTTTTGTTTGTGAAAAGCA+TGG | + | tig0022368:36161-36180 | None:intergenic | 30.0% |
| TTACAATTGTTGCATACAAG+TGG | - | tig0022368:36252-36271 | Msa1399500:CDS | 30.0% | |
| ! | AGCAGATTTAACAAGACTTT+TGG | + | tig0022368:36311-36330 | None:intergenic | 30.0% |
| GACAGTAAATTTACAGTCTA+TGG | - | tig0022368:36342-36361 | Msa1399500:CDS | 30.0% | |
| ! | GTTTTTGAACCTTGGTAAAA+TGG | - | tig0022368:36462-36481 | Msa1399500:CDS | 30.0% |
| CCTCCCAACATATTAAATTT+AGG | + | tig0022368:36496-36515 | None:intergenic | 30.0% | |
| CCTAAATTTAATATGTTGGG+AGG | - | tig0022368:36493-36512 | Msa1399500:CDS | 30.0% | |
| AAATTTAATATGTTGGGAGG+GGG | - | tig0022368:36496-36515 | Msa1399500:CDS | 30.0% | |
| GTTATATGGAAGCAAAAAAG+AGG | - | tig0022368:36689-36708 | Msa1399500:CDS | 30.0% | |
| !!! | AGGATTTTGATGATTAGTCT+TGG | - | tig0022368:36727-36746 | Msa1399500:CDS | 30.0% |
| AAAGGATTATTGAGTGTATC+TGG | + | tig0022368:36844-36863 | None:intergenic | 30.0% | |
| !! | ATGAATATCTTAGCTTTGTG+AGG | - | tig0022368:36890-36909 | Msa1399500:CDS | 30.0% |
| AAACAAAAACCTAGGTCTTG+AGG | - | tig0022368:35664-35683 | Msa1399500:CDS | 35.0% | |
| ATCTAAATTCCTCAAGACCT+AGG | + | tig0022368:35676-35695 | None:intergenic | 35.0% | |
| TAGATTCCTCCTTAAAACCA+TGG | - | tig0022368:35691-35710 | Msa1399500:CDS | 35.0% | |
| !!! | AACTAACCATGGTTTTAAGG+AGG | + | tig0022368:35700-35719 | None:intergenic | 35.0% |
| !! | CTGAACTAACCATGGTTTTA+AGG | + | tig0022368:35703-35722 | None:intergenic | 35.0% |
| ! | CTTAAAACCATGGTTAGTTC+AGG | - | tig0022368:35701-35720 | Msa1399500:CDS | 35.0% |
| ! | ATTATTCTTGCTGTGAGTGA+AGG | + | tig0022368:35917-35936 | None:intergenic | 35.0% |
| GTAAAAGTCTTCAATCTTGC+AGG | - | tig0022368:35962-35981 | Msa1399500:CDS | 35.0% | |
| CATGTGTTTCAGTTTCAAGA+TGG | + | tig0022368:36200-36219 | None:intergenic | 35.0% | |
| CATCTTGAAACTGAAACACA+TGG | - | tig0022368:36198-36217 | Msa1399500:CDS | 35.0% | |
| ATACAAGTGGAAGATGAAGA+AGG | - | tig0022368:36265-36284 | Msa1399500:CDS | 35.0% | |
| ! | GAACATTTTTGTGTTCATCC+TGG | - | tig0022368:36541-36560 | Msa1399500:CDS | 35.0% |
| !!! | GGTGGATTATGGTATGTTTT+AGG | - | tig0022368:36667-36686 | Msa1399500:CDS | 35.0% |
| GCAAAAAAGAGGCTTAAGAA+AGG | - | tig0022368:36700-36719 | Msa1399500:CDS | 35.0% | |
| TTGTGTTTGGGAAGTTATGA+AGG | - | tig0022368:36771-36790 | Msa1399500:CDS | 35.0% | |
| !! | ATATCTTAGCTTTGTGAGGT+TGG | - | tig0022368:36894-36913 | Msa1399500:CDS | 35.0% |
| !! | GAGGTTGGATTTTAGTACTA+TGG | - | tig0022368:36909-36928 | Msa1399500:CDS | 35.0% |
| AAACAAAAACCTAGGTCTTG+AGG | - | tig0022368:35664-35683 | Msa1399500:CDS | 35.0% | |
| ATCTAAATTCCTCAAGACCT+AGG | + | tig0022368:35676-35695 | None:intergenic | 35.0% | |
| TAGATTCCTCCTTAAAACCA+TGG | - | tig0022368:35691-35710 | Msa1399500:CDS | 35.0% | |
| !!! | AACTAACCATGGTTTTAAGG+AGG | + | tig0022368:35700-35719 | None:intergenic | 35.0% |
| !! | CTGAACTAACCATGGTTTTA+AGG | + | tig0022368:35703-35722 | None:intergenic | 35.0% |
| ! | CTTAAAACCATGGTTAGTTC+AGG | - | tig0022368:35701-35720 | Msa1399500:CDS | 35.0% |
| ! | ATTATTCTTGCTGTGAGTGA+AGG | + | tig0022368:35917-35936 | None:intergenic | 35.0% |
| GTAAAAGTCTTCAATCTTGC+AGG | - | tig0022368:35962-35981 | Msa1399500:CDS | 35.0% | |
| CATGTGTTTCAGTTTCAAGA+TGG | + | tig0022368:36200-36219 | None:intergenic | 35.0% | |
| CATCTTGAAACTGAAACACA+TGG | - | tig0022368:36198-36217 | Msa1399500:CDS | 35.0% | |
| ATACAAGTGGAAGATGAAGA+AGG | - | tig0022368:36265-36284 | Msa1399500:CDS | 35.0% | |
| ! | GAACATTTTTGTGTTCATCC+TGG | - | tig0022368:36541-36560 | Msa1399500:CDS | 35.0% |
| !!! | GGTGGATTATGGTATGTTTT+AGG | - | tig0022368:36667-36686 | Msa1399500:CDS | 35.0% |
| GCAAAAAAGAGGCTTAAGAA+AGG | - | tig0022368:36700-36719 | Msa1399500:CDS | 35.0% | |
| TTGTGTTTGGGAAGTTATGA+AGG | - | tig0022368:36771-36790 | Msa1399500:CDS | 35.0% | |
| !! | ATATCTTAGCTTTGTGAGGT+TGG | - | tig0022368:36894-36913 | Msa1399500:CDS | 35.0% |
| !! | GAGGTTGGATTTTAGTACTA+TGG | - | tig0022368:36909-36928 | Msa1399500:CDS | 35.0% |
| ! | ACCATGGTTAGTTCAGGAAT+CGG | - | tig0022368:35707-35726 | Msa1399500:CDS | 40.0% |
| TGTCCAAGAAACGTTCTTGA+AGG | - | tig0022368:35743-35762 | Msa1399500:CDS | 40.0% | |
| CTTCCTTCAAGAACGTTTCT+TGG | + | tig0022368:35749-35768 | None:intergenic | 40.0% | |
| AGTCTTCAATCTTGCAGGAA+TGG | - | tig0022368:35967-35986 | Msa1399500:CDS | 40.0% | |
| GTCTTCAATCTTGCAGGAAT+GGG | - | tig0022368:35968-35987 | Msa1399500:CDS | 40.0% | |
| TCTTCAATCTTGCAGGAATG+GGG | - | tig0022368:35969-35988 | Msa1399500:CDS | 40.0% | |
| TGTGCTCACAACAATTCCAA+GGG | + | tig0022368:36056-36075 | None:intergenic | 40.0% | |
| !!! | TCTAACTGTCTTTTTCGAGC+AGG | - | tig0022368:36127-36146 | Msa1399500:CDS | 40.0% |
| CACATGGAAAGAACACAGTA+TGG | - | tig0022368:36214-36233 | Msa1399500:CDS | 40.0% | |
| ! | GAAGATGAAGAAGGTTTTGC+AGG | - | tig0022368:36274-36293 | Msa1399500:CDS | 40.0% |
| ! | TCCCAAAGATTCTCCCATTT+TGG | - | tig0022368:36365-36384 | Msa1399500:CDS | 40.0% |
| CCCAAAATGGGAGAATCTTT+GGG | + | tig0022368:36369-36388 | None:intergenic | 40.0% | |
| ! | CCCAAAGATTCTCCCATTTT+GGG | - | tig0022368:36366-36385 | Msa1399500:CDS | 40.0% |
| TCCCAAAATGGGAGAATCTT+TGG | + | tig0022368:36370-36389 | None:intergenic | 40.0% | |
| GGGGGTTTGAATTTGAAAAG+TGG | - | tig0022368:36514-36533 | Msa1399500:CDS | 40.0% | |
| ! | CATTTTTGTGTTCATCCTGG+TGG | - | tig0022368:36544-36563 | Msa1399500:CDS | 40.0% |
| !! | AGTTATTGATGGGGTTGGTA+AGG | - | tig0022368:36573-36592 | Msa1399500:CDS | 40.0% |
| !! | GTTATTGATGGGGTTGGTAA+GGG | - | tig0022368:36574-36593 | Msa1399500:CDS | 40.0% |
| AATATGATCTTGAGCCAGCT+AGG | - | tig0022368:36611-36630 | Msa1399500:CDS | 40.0% | |
| !! | ATACTTCTGCTGGTGGATTA+TGG | - | tig0022368:36656-36675 | Msa1399500:CDS | 40.0% |
| AGAGGCTTAAGAAAGGTGAT+AGG | - | tig0022368:36707-36726 | Msa1399500:CDS | 40.0% | |
| !! | TTGATGATTAGTCTTGGAGC+TGG | - | tig0022368:36733-36752 | Msa1399500:CDS | 40.0% |
| !! | TGATGATTAGTCTTGGAGCT+GGG | - | tig0022368:36734-36753 | Msa1399500:CDS | 40.0% |
| GGATTATTGAGTGTATCTGG+AGG | + | tig0022368:36841-36860 | None:intergenic | 40.0% | |
| ! | ACCATGGTTAGTTCAGGAAT+CGG | - | tig0022368:35707-35726 | Msa1399500:CDS | 40.0% |
| TGTCCAAGAAACGTTCTTGA+AGG | - | tig0022368:35743-35762 | Msa1399500:CDS | 40.0% | |
| CTTCCTTCAAGAACGTTTCT+TGG | + | tig0022368:35749-35768 | None:intergenic | 40.0% | |
| AGTCTTCAATCTTGCAGGAA+TGG | - | tig0022368:35967-35986 | Msa1399500:CDS | 40.0% | |
| GTCTTCAATCTTGCAGGAAT+GGG | - | tig0022368:35968-35987 | Msa1399500:CDS | 40.0% | |
| TCTTCAATCTTGCAGGAATG+GGG | - | tig0022368:35969-35988 | Msa1399500:CDS | 40.0% | |
| TGTGCTCACAACAATTCCAA+GGG | + | tig0022368:36056-36075 | None:intergenic | 40.0% | |
| !!! | TCTAACTGTCTTTTTCGAGC+AGG | - | tig0022368:36127-36146 | Msa1399500:CDS | 40.0% |
| CACATGGAAAGAACACAGTA+TGG | - | tig0022368:36214-36233 | Msa1399500:CDS | 40.0% | |
| ! | GAAGATGAAGAAGGTTTTGC+AGG | - | tig0022368:36274-36293 | Msa1399500:CDS | 40.0% |
| ! | TCCCAAAGATTCTCCCATTT+TGG | - | tig0022368:36365-36384 | Msa1399500:CDS | 40.0% |
| CCCAAAATGGGAGAATCTTT+GGG | + | tig0022368:36369-36388 | None:intergenic | 40.0% | |
| ! | CCCAAAGATTCTCCCATTTT+GGG | - | tig0022368:36366-36385 | Msa1399500:CDS | 40.0% |
| TCCCAAAATGGGAGAATCTT+TGG | + | tig0022368:36370-36389 | None:intergenic | 40.0% | |
| GGGGGTTTGAATTTGAAAAG+TGG | - | tig0022368:36514-36533 | Msa1399500:CDS | 40.0% | |
| ! | CATTTTTGTGTTCATCCTGG+TGG | - | tig0022368:36544-36563 | Msa1399500:CDS | 40.0% |
| !! | AGTTATTGATGGGGTTGGTA+AGG | - | tig0022368:36573-36592 | Msa1399500:CDS | 40.0% |
| !! | GTTATTGATGGGGTTGGTAA+GGG | - | tig0022368:36574-36593 | Msa1399500:CDS | 40.0% |
| AATATGATCTTGAGCCAGCT+AGG | - | tig0022368:36611-36630 | Msa1399500:CDS | 40.0% | |
| !! | ATACTTCTGCTGGTGGATTA+TGG | - | tig0022368:36656-36675 | Msa1399500:CDS | 40.0% |
| AGAGGCTTAAGAAAGGTGAT+AGG | - | tig0022368:36707-36726 | Msa1399500:CDS | 40.0% | |
| !! | TTGATGATTAGTCTTGGAGC+TGG | - | tig0022368:36733-36752 | Msa1399500:CDS | 40.0% |
| !! | TGATGATTAGTCTTGGAGCT+GGG | - | tig0022368:36734-36753 | Msa1399500:CDS | 40.0% |
| GGATTATTGAGTGTATCTGG+AGG | + | tig0022368:36841-36860 | None:intergenic | 40.0% | |
| ! | ACCGATTCCTGAACTAACCA+TGG | + | tig0022368:35711-35730 | None:intergenic | 45.0% |
| CTGTGCTCACAACAATTCCA+AGG | + | tig0022368:36057-36076 | None:intergenic | 45.0% | |
| GTTGTGAGCACAGAAGATCT+TGG | - | tig0022368:36064-36083 | Msa1399500:CDS | 45.0% | |
| ! | CAGAAGATCTTGGCTCTCAT+TGG | - | tig0022368:36074-36093 | Msa1399500:CDS | 45.0% |
| !!! | AACTGTCTTTTTCGAGCAGG+TGG | - | tig0022368:36130-36149 | Msa1399500:CDS | 45.0% |
| !! | GATTCTCCCATTTTGGGAAC+TGG | - | tig0022368:36372-36391 | Msa1399500:CDS | 45.0% |
| ACCTGACCAGTTCCCAAAAT+GGG | + | tig0022368:36381-36400 | None:intergenic | 45.0% | |
| AACCTGACCAGTTCCCAAAA+TGG | + | tig0022368:36382-36401 | None:intergenic | 45.0% | |
| TTTGTGTTCATCCTGGTGGT+AGG | - | tig0022368:36548-36567 | Msa1399500:CDS | 45.0% | |
| TTGTGTTCATCCTGGTGGTA+GGG | - | tig0022368:36549-36568 | Msa1399500:CDS | 45.0% | |
| GTGGTAGGGCAGTTATTGAT+GGG | - | tig0022368:36563-36582 | Msa1399500:CDS | 45.0% | |
| TGGTAGGGCAGTTATTGATG+GGG | - | tig0022368:36564-36583 | Msa1399500:CDS | 45.0% | |
| TAGGATGGCACTTCATCGTT+GGG | - | tig0022368:36630-36649 | Msa1399500:CDS | 45.0% | |
| ! | ACCGATTCCTGAACTAACCA+TGG | + | tig0022368:35711-35730 | None:intergenic | 45.0% |
| CTGTGCTCACAACAATTCCA+AGG | + | tig0022368:36057-36076 | None:intergenic | 45.0% | |
| GTTGTGAGCACAGAAGATCT+TGG | - | tig0022368:36064-36083 | Msa1399500:CDS | 45.0% | |
| ! | CAGAAGATCTTGGCTCTCAT+TGG | - | tig0022368:36074-36093 | Msa1399500:CDS | 45.0% |
| !!! | AACTGTCTTTTTCGAGCAGG+TGG | - | tig0022368:36130-36149 | Msa1399500:CDS | 45.0% |
| !! | GATTCTCCCATTTTGGGAAC+TGG | - | tig0022368:36372-36391 | Msa1399500:CDS | 45.0% |
| ACCTGACCAGTTCCCAAAAT+GGG | + | tig0022368:36381-36400 | None:intergenic | 45.0% | |
| AACCTGACCAGTTCCCAAAA+TGG | + | tig0022368:36382-36401 | None:intergenic | 45.0% | |
| TTTGTGTTCATCCTGGTGGT+AGG | - | tig0022368:36548-36567 | Msa1399500:CDS | 45.0% | |
| TTGTGTTCATCCTGGTGGTA+GGG | - | tig0022368:36549-36568 | Msa1399500:CDS | 45.0% | |
| GTGGTAGGGCAGTTATTGAT+GGG | - | tig0022368:36563-36582 | Msa1399500:CDS | 45.0% | |
| TGGTAGGGCAGTTATTGATG+GGG | - | tig0022368:36564-36583 | Msa1399500:CDS | 45.0% | |
| TAGGATGGCACTTCATCGTT+GGG | - | tig0022368:36630-36649 | Msa1399500:CDS | 45.0% | |
| ! | CTTGGCTCTCATTGGTACTG+TGG | - | tig0022368:36082-36101 | Msa1399500:CDS | 50.0% |
| !! | TCCCATTTTGGGAACTGGTC+AGG | - | tig0022368:36377-36396 | Msa1399500:CDS | 50.0% |
| TCAATAACTGCCCTACCACC+AGG | + | tig0022368:36562-36581 | None:intergenic | 50.0% | |
| GGTGGTAGGGCAGTTATTGA+TGG | - | tig0022368:36562-36581 | Msa1399500:CDS | 50.0% | |
| AGGGCAGTTATTGATGGGGT+TGG | - | tig0022368:36568-36587 | Msa1399500:CDS | 50.0% | |
| TGATCTTGAGCCAGCTAGGA+TGG | - | tig0022368:36615-36634 | Msa1399500:CDS | 50.0% | |
| CTAGGATGGCACTTCATCGT+TGG | - | tig0022368:36629-36648 | Msa1399500:CDS | 50.0% | |
| AGGATGGCACTTCATCGTTG+GGG | - | tig0022368:36631-36650 | Msa1399500:CDS | 50.0% | |
| CGTTGGGGTAATACTTCTGC+TGG | - | tig0022368:36646-36665 | Msa1399500:CDS | 50.0% | |
| TGGGGTAATACTTCTGCTGG+TGG | - | tig0022368:36649-36668 | Msa1399500:CDS | 50.0% | |
| ! | CTTGGCTCTCATTGGTACTG+TGG | - | tig0022368:36082-36101 | Msa1399500:CDS | 50.0% |
| !! | TCCCATTTTGGGAACTGGTC+AGG | - | tig0022368:36377-36396 | Msa1399500:CDS | 50.0% |
| TCAATAACTGCCCTACCACC+AGG | + | tig0022368:36562-36581 | None:intergenic | 50.0% | |
| GGTGGTAGGGCAGTTATTGA+TGG | - | tig0022368:36562-36581 | Msa1399500:CDS | 50.0% | |
| AGGGCAGTTATTGATGGGGT+TGG | - | tig0022368:36568-36587 | Msa1399500:CDS | 50.0% | |
| TGATCTTGAGCCAGCTAGGA+TGG | - | tig0022368:36615-36634 | Msa1399500:CDS | 50.0% | |
| CTAGGATGGCACTTCATCGT+TGG | - | tig0022368:36629-36648 | Msa1399500:CDS | 50.0% | |
| AGGATGGCACTTCATCGTTG+GGG | - | tig0022368:36631-36650 | Msa1399500:CDS | 50.0% | |
| CGTTGGGGTAATACTTCTGC+TGG | - | tig0022368:36646-36665 | Msa1399500:CDS | 50.0% | |
| TGGGGTAATACTTCTGCTGG+TGG | - | tig0022368:36649-36668 | Msa1399500:CDS | 50.0% | |
| ! | CTTGCTGTGAGTGAAGGTGC+TGG | + | tig0022368:35911-35930 | None:intergenic | 55.0% |
| ! | CGATGAAGTGCCATCCTAGC+TGG | + | tig0022368:36628-36647 | None:intergenic | 55.0% |
| ! | CTTGCTGTGAGTGAAGGTGC+TGG | + | tig0022368:35911-35930 | None:intergenic | 55.0% |
| ! | CGATGAAGTGCCATCCTAGC+TGG | + | tig0022368:36628-36647 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022368 | gene | 35659 | 36942 | 35659 | ID=Msa1399500;Name=Msa1399500 |
| tig0022368 | mRNA | 35659 | 36942 | 35659 | ID=Msa1399500-mRNA-1;Parent=Msa1399500;Name=Msa1399500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|427 |
| tig0022368 | exon | 35659 | 36942 | 35659 | ID=Msa1399500-mRNA-1:exon:17217;Parent=Msa1399500-mRNA-1 |
| tig0022368 | CDS | 35659 | 36942 | 35659 | ID=Msa1399500-mRNA-1:cds;Parent=Msa1399500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
