Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409750 | XP_013470473.1 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409750 | sp|Q9LZ72|KCS19_ARATH | 62.796 | 422 | 137 | 4 | 2 | 420 | 60 | 464 | 0.0 | 563 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409750 | A0A072VS55 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1409750 | 0.800391 | 1.473651e-48 | -8.615850e-47 |
| Msa0055280 | Msa1409750 | 0.833665 | 4.681477e-56 | -8.615850e-47 |
| Msa0101060 | Msa1409750 | 0.825142 | 5.506421e-54 | -8.615850e-47 |
| Msa1363890 | Msa1409750 | 0.806102 | 9.680481e-50 | -8.615850e-47 |
| Msa1373950 | Msa1409750 | 0.833726 | 4.518504e-56 | -8.615850e-47 |
| Msa1397540 | Msa1409750 | 0.800586 | 1.344274e-48 | -8.615850e-47 |
| Msa1399500 | Msa1409750 | 0.995391 | 8.450249e-216 | -8.615850e-47 |
| Msa1405470 | Msa1409750 | 0.806603 | 7.591696e-50 | -8.615850e-47 |
| Msa1409750 | Msa1423080 | 0.818535 | 1.863709e-52 | -8.615850e-47 |
| Msa1409750 | Msa1447160 | -0.845746 | 3.349963e-59 | -8.615850e-47 |
| Msa1409750 | Msa1460310 | -0.809759 | 1.614616e-50 | -8.615850e-47 |
| Msa0620640 | Msa1409750 | 0.839012 | 2.043814e-57 | -8.615850e-47 |
| Msa0621890 | Msa1409750 | 0.816448 | 5.500870e-52 | -8.615850e-47 |
| Msa0623170 | Msa1409750 | 0.997008 | 1.833564e-235 | -8.615850e-47 |
| Msa0678240 | Msa1409750 | 0.822616 | 2.153851e-53 | -8.615850e-47 |
| Msa0701770 | Msa1409750 | 0.812689 | 3.736171e-51 | -8.615850e-47 |
| Msa0703490 | Msa1409750 | 0.800717 | 1.264439e-48 | -8.615850e-47 |
| Msa0721150 | Msa1409750 | 0.838562 | 2.671430e-57 | -8.615850e-47 |
| Msa0731710 | Msa1409750 | 0.803079 | 4.137352e-49 | -8.615850e-47 |
| Msa0734340 | Msa1409750 | 0.815787 | 7.727829e-52 | -8.615850e-47 |
| Msa0739570 | Msa1409750 | 0.805326 | 1.409171e-49 | -8.615850e-47 |
| Msa0744450 | Msa1409750 | 0.804752 | 1.857458e-49 | -8.615850e-47 |
| Msa0752580 | Msa1409750 | 0.806812 | 6.858726e-50 | -8.615850e-47 |
| Msa0754500 | Msa1409750 | 0.805739 | 1.154286e-49 | -8.615850e-47 |
| Msa0756480 | Msa1409750 | 0.817752 | 2.801294e-52 | -8.615850e-47 |
| Msa0761760 | Msa1409750 | 0.834650 | 2.651933e-56 | -8.615850e-47 |
| Msa0792510 | Msa1409750 | 0.834242 | 3.357318e-56 | -8.615850e-47 |
| Msa0804060 | Msa1409750 | 0.833604 | 4.846782e-56 | -8.615850e-47 |
| Msa0820670 | Msa1409750 | 0.803828 | 2.893528e-49 | -8.615850e-47 |
| Msa0830900 | Msa1409750 | 0.817170 | 3.787927e-52 | -8.615850e-47 |
| Msa0835510 | Msa1409750 | 0.819897 | 9.125775e-53 | -8.615850e-47 |
| Msa0842240 | Msa1409750 | 0.829896 | 3.983194e-55 | -8.615850e-47 |
| Msa0139720 | Msa1409750 | -0.814673 | 1.366908e-51 | -8.615850e-47 |
| Msa0140910 | Msa1409750 | 0.814839 | 1.255979e-51 | -8.615850e-47 |
| Msa0164660 | Msa1409750 | 0.815180 | 1.055071e-51 | -8.615850e-47 |
| Msa0169960 | Msa1409750 | 0.811455 | 6.940320e-51 | -8.615850e-47 |
| Msa0197750 | Msa1409750 | -0.828107 | 1.080299e-54 | -8.615850e-47 |
| Msa0201370 | Msa1409750 | 0.800859 | 1.182668e-48 | -8.615850e-47 |
| Msa0211010 | Msa1409750 | 0.819269 | 1.269057e-52 | -8.615850e-47 |
| Msa0213080 | Msa1409750 | 0.844935 | 5.554949e-59 | -8.615850e-47 |
| Msa0213090 | Msa1409750 | 0.817735 | 2.826684e-52 | -8.615850e-47 |
| Msa0219660 | Msa1409750 | 0.813464 | 2.525737e-51 | -8.615850e-47 |
| Msa0227800 | Msa1409750 | 0.810954 | 8.914110e-51 | -8.615850e-47 |
| Msa0232860 | Msa1409750 | 0.823497 | 1.341702e-53 | -8.615850e-47 |
| Msa1226640 | Msa1409750 | 0.823761 | 1.163714e-53 | -8.615850e-47 |
| Msa1238480 | Msa1409750 | 0.826054 | 3.347860e-54 | -8.615850e-47 |
| Msa1243130 | Msa1409750 | 0.823946 | 1.053028e-53 | -8.615850e-47 |
| Msa1254470 | Msa1409750 | 0.832212 | 1.075218e-55 | -8.615850e-47 |
| Msa1254770 | Msa1409750 | 0.822096 | 2.843075e-53 | -8.615850e-47 |
| Msa1254800 | Msa1409750 | 0.815486 | 9.018993e-52 | -8.615850e-47 |
| Msa1258280 | Msa1409750 | 0.805860 | 1.088420e-49 | -8.615850e-47 |
| Msa1279860 | Msa1409750 | 0.811800 | 5.841598e-51 | -8.615850e-47 |
| Msa1295010 | Msa1409750 | 0.813665 | 2.282128e-51 | -8.615850e-47 |
| Msa1298290 | Msa1409750 | 0.810961 | 8.882153e-51 | -8.615850e-47 |
| Msa1300090 | Msa1409750 | 0.817165 | 3.798356e-52 | -8.615850e-47 |
| Msa1329990 | Msa1409750 | 0.817613 | 3.011732e-52 | -8.615850e-47 |
| Msa1337190 | Msa1409750 | 0.807443 | 5.041543e-50 | -8.615850e-47 |
| Msa1337340 | Msa1409750 | 0.804150 | 2.479817e-49 | -8.615850e-47 |
| Msa0365360 | Msa1409750 | 0.809185 | 2.143882e-50 | -8.615850e-47 |
| Msa0371610 | Msa1409750 | 0.842111 | 3.156604e-58 | -8.615850e-47 |
| Msa0409820 | Msa1409750 | 0.811882 | 5.605696e-51 | -8.615850e-47 |
| Msa0413740 | Msa1409750 | 0.807761 | 4.315617e-50 | -8.615850e-47 |
| Msa0418000 | Msa1409750 | 0.811936 | 5.455314e-51 | -8.615850e-47 |
| Msa0420070 | Msa1409750 | 0.826312 | 2.906398e-54 | -8.615850e-47 |
| Msa0442880 | Msa1409750 | 0.820740 | 5.845485e-53 | -8.615850e-47 |
| Msa0455260 | Msa1409750 | 0.807036 | 6.150626e-50 | -8.615850e-47 |
| Msa0458790 | Msa1409750 | 0.801902 | 7.233090e-49 | -8.615850e-47 |
| Msa0466100 | Msa1409750 | 0.819369 | 1.204123e-52 | -8.615850e-47 |
| Msa0467920 | Msa1409750 | -0.839233 | 1.790989e-57 | -8.615850e-47 |
| Msa0994660 | Msa1409750 | 0.831042 | 2.089086e-55 | -8.615850e-47 |
| Msa1009000 | Msa1409750 | 0.819746 | 9.878009e-53 | -8.615850e-47 |
| Msa1018720 | Msa1409750 | 0.808045 | 3.755575e-50 | -8.615850e-47 |
| Msa1032350 | Msa1409750 | 0.801997 | 6.913896e-49 | -8.615850e-47 |
| Msa1036390 | Msa1409750 | 0.809207 | 2.120954e-50 | -8.615850e-47 |
| Msa1044040 | Msa1409750 | 0.804329 | 2.276033e-49 | -8.615850e-47 |
| Msa1069300 | Msa1409750 | 0.814079 | 1.849397e-51 | -8.615850e-47 |
| Msa1072350 | Msa1409750 | 0.804075 | 2.570549e-49 | -8.615850e-47 |
| Msa1076680 | Msa1409750 | 0.810675 | 1.024701e-50 | -8.615850e-47 |
| Msa1081600 | Msa1409750 | 0.843519 | 1.333118e-58 | -8.615850e-47 |
| Msa0253370 | Msa1409750 | 0.842155 | 3.072857e-58 | -8.615850e-47 |
| Msa0260970 | Msa1409750 | 0.813699 | 2.242056e-51 | -8.615850e-47 |
| Msa0264940 | Msa1409750 | -0.806988 | 6.295530e-50 | -8.615850e-47 |
| Msa0277280 | Msa1409750 | -0.830687 | 2.551529e-55 | -8.615850e-47 |
| Msa0282590 | Msa1409750 | 0.808408 | 3.142589e-50 | -8.615850e-47 |
| Msa0288320 | Msa1409750 | 0.808044 | 3.757707e-50 | -8.615850e-47 |
| Msa0290950 | Msa1409750 | 0.828894 | 6.974318e-55 | -8.615850e-47 |
| Msa0290970 | Msa1409750 | 0.825673 | 4.122416e-54 | -8.615850e-47 |
| Msa0292180 | Msa1409750 | 0.839144 | 1.888987e-57 | -8.615850e-47 |
| Msa0302990 | Msa1409750 | -0.810460 | 1.140246e-50 | -8.615850e-47 |
| Msa0304990 | Msa1409750 | 0.852642 | 4.037865e-61 | -8.615850e-47 |
| Msa0306130 | Msa1409750 | 0.813207 | 2.877376e-51 | -8.615850e-47 |
| Msa0330400 | Msa1409750 | 0.837152 | 6.153909e-57 | -8.615850e-47 |
| Msa0351230 | Msa1409750 | 0.814403 | 1.568676e-51 | -8.615850e-47 |
| Msa0358710 | Msa1409750 | 0.801298 | 9.617332e-49 | -8.615850e-47 |
| Msa1118140 | Msa1409750 | 0.803479 | 3.418542e-49 | -8.615850e-47 |
| Msa1125040 | Msa1409750 | 0.810862 | 9.333208e-51 | -8.615850e-47 |
| Msa1132560 | Msa1409750 | -0.815532 | 8.810724e-52 | -8.615850e-47 |
| Msa1151960 | Msa1409750 | 0.804302 | 2.306102e-49 | -8.615850e-47 |
| Msa1154820 | Msa1409750 | 0.800398 | 1.468574e-48 | -8.615850e-47 |
| Msa1159360 | Msa1409750 | 0.811635 | 6.344307e-51 | -8.615850e-47 |
| Msa1166370 | Msa1409750 | 0.840396 | 8.915866e-58 | -8.615850e-47 |
| Msa1167400 | Msa1409750 | 0.808175 | 3.524300e-50 | -8.615850e-47 |
| Msa1201610 | Msa1409750 | 0.802073 | 6.668766e-49 | -8.615850e-47 |
| Msa1201990 | Msa1409750 | 0.814900 | 1.217344e-51 | -8.615850e-47 |
| Msa1213020 | Msa1409750 | 0.817881 | 2.620176e-52 | -8.615850e-47 |
| Msa1220230 | Msa1409750 | 0.800722 | 1.261084e-48 | -8.615850e-47 |
| Msa1221200 | Msa1409750 | -0.801334 | 9.455858e-49 | -8.615850e-47 |
| Msa1221260 | Msa1409750 | 0.821212 | 4.552405e-53 | -8.615850e-47 |
| Msa0490480 | Msa1409750 | 0.810774 | 9.751043e-51 | -8.615850e-47 |
| Msa0502500 | Msa1409750 | 0.835354 | 1.761550e-56 | -8.615850e-47 |
| Msa0505390 | Msa1409750 | 0.806935 | 6.459453e-50 | -8.615850e-47 |
| Msa0511890 | Msa1409750 | 0.804399 | 2.201279e-49 | -8.615850e-47 |
| Msa0514330 | Msa1409750 | -0.817268 | 3.600449e-52 | -8.615850e-47 |
| Msa0565490 | Msa1409750 | 0.813953 | 1.971707e-51 | -8.615850e-47 |
| Msa0575250 | Msa1409750 | 0.810868 | 9.305133e-51 | -8.615850e-47 |
| Msa0581340 | Msa1409750 | 0.819918 | 9.021709e-53 | -8.615850e-47 |
| Msa0599250 | Msa1409750 | 0.803885 | 2.815233e-49 | -8.615850e-47 |
| Msa0853860 | Msa1409750 | 0.833947 | 3.978565e-56 | -8.615850e-47 |
| Msa0855520 | Msa1409750 | 0.810876 | 9.266561e-51 | -8.615850e-47 |
| Msa0860270 | Msa1409750 | 0.813217 | 2.862438e-51 | -8.615850e-47 |
| Msa0864950 | Msa1409750 | 0.816128 | 6.488201e-52 | -8.615850e-47 |
| Msa0880080 | Msa1409750 | 0.819517 | 1.114046e-52 | -8.615850e-47 |
| Msa0887070 | Msa1409750 | 0.807189 | 5.707929e-50 | -8.615850e-47 |
| Msa0903730 | Msa1409750 | 0.816218 | 6.192900e-52 | -8.615850e-47 |
| Msa0921630 | Msa1409750 | 0.846172 | 2.565942e-59 | -8.615850e-47 |
| Msa0950410 | Msa1409750 | 0.801804 | 7.574153e-49 | -8.615850e-47 |
| Msa0951720 | Msa1409750 | 0.817504 | 3.186195e-52 | -8.615850e-47 |
| Msa0960270 | Msa1409750 | 0.844156 | 9.001481e-59 | -8.615850e-47 |
| Msa0973230 | Msa1409750 | 0.822611 | 2.159254e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409750 | MtrunA17_Chr1g0212951 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Msa1409750 | MtrunA17_Chr4g0030591 | 56.341 | 410 | 171 | 1 | 2 | 411 | 58 | 459 | 3.13e-176 | 501 |
| Msa1409750 | MtrunA17_Chr4g0030581 | 57.561 | 410 | 165 | 1 | 2 | 411 | 58 | 458 | 1.11e-174 | 496 |
| Msa1409750 | MtrunA17_Chr4g0030601 | 56.341 | 410 | 162 | 2 | 2 | 411 | 58 | 450 | 1.34e-174 | 496 |
| Msa1409750 | MtrunA17_Chr2g0327721 | 55.396 | 417 | 164 | 4 | 3 | 411 | 59 | 461 | 6.60e-167 | 477 |
| Msa1409750 | MtrunA17_Chr7g0276251 | 42.640 | 394 | 200 | 4 | 6 | 394 | 153 | 525 | 4.38e-111 | 337 |
| Msa1409750 | MtrunA17_Chr4g0035081 | 42.025 | 395 | 201 | 4 | 9 | 399 | 134 | 504 | 1.48e-107 | 327 |
| Msa1409750 | MtrunA17_Chr5g0423521 | 42.188 | 384 | 198 | 4 | 13 | 394 | 126 | 487 | 8.03e-106 | 322 |
| Msa1409750 | MtrunA17_Chr1g0209881 | 41.667 | 384 | 200 | 5 | 13 | 394 | 126 | 487 | 1.65e-105 | 321 |
| Msa1409750 | MtrunA17_Chr1g0188051 | 41.388 | 389 | 203 | 4 | 9 | 394 | 137 | 503 | 4.34e-104 | 318 |
| Msa1409750 | MtrunA17_Chr2g0306781 | 41.860 | 387 | 200 | 4 | 13 | 396 | 34 | 398 | 1.59e-103 | 313 |
| Msa1409750 | MtrunA17_Chr1g0166191 | 40.360 | 389 | 207 | 5 | 9 | 394 | 143 | 509 | 9.40e-101 | 310 |
| Msa1409750 | MtrunA17_Chr3g0136561 | 40.415 | 386 | 213 | 4 | 13 | 394 | 528 | 900 | 1.41e-100 | 319 |
| Msa1409750 | MtrunA17_Chr4g0063011 | 40.153 | 391 | 209 | 4 | 9 | 396 | 125 | 493 | 4.22e-100 | 307 |
| Msa1409750 | MtrunA17_Chr2g0277841 | 38.677 | 393 | 216 | 4 | 5 | 394 | 78 | 448 | 8.95e-96 | 295 |
| Msa1409750 | MtrunA17_Chr6g0480561 | 37.722 | 395 | 216 | 6 | 9 | 397 | 98 | 468 | 5.46e-94 | 291 |
| Msa1409750 | MtrunA17_Chr2g0295781 | 37.028 | 397 | 218 | 6 | 9 | 398 | 81 | 452 | 1.80e-92 | 286 |
| Msa1409750 | MtrunA17_Chr1g0204301 | 38.303 | 389 | 216 | 4 | 9 | 394 | 116 | 483 | 5.17e-84 | 265 |
| Msa1409750 | MtrunA17_Chr3g0115021 | 38.035 | 397 | 214 | 7 | 9 | 399 | 117 | 487 | 3.12e-83 | 263 |
| Msa1409750 | MtrunA17_Chr3g0115041 | 38.035 | 397 | 214 | 7 | 9 | 399 | 117 | 487 | 3.47e-83 | 263 |
| Msa1409750 | MtrunA17_Chr7g0276241 | 40.909 | 308 | 151 | 3 | 92 | 394 | 2 | 283 | 1.36e-82 | 255 |
| Msa1409750 | MtrunA17_Chr7g0250661 | 40.584 | 308 | 159 | 3 | 92 | 396 | 2 | 288 | 4.86e-81 | 251 |
| Msa1409750 | MtrunA17_Chr6g0469631 | 38.539 | 397 | 212 | 7 | 9 | 399 | 116 | 486 | 1.57e-79 | 254 |
| Msa1409750 | MtrunA17_Chr2g0282281 | 35.356 | 379 | 220 | 3 | 2 | 380 | 139 | 492 | 1.29e-78 | 252 |
| Msa1409750 | MtrunA17_Chr6g0461631 | 37.132 | 272 | 147 | 4 | 126 | 394 | 3 | 253 | 1.55e-58 | 192 |
| Msa1409750 | MtrunA17_Chr4g0026871 | 37.349 | 249 | 127 | 5 | 154 | 396 | 1 | 226 | 6.97e-53 | 176 |
| Msa1409750 | MtrunA17_Chr4g0026791 | 36.634 | 202 | 102 | 4 | 154 | 352 | 1 | 179 | 1.50e-37 | 134 |
| Msa1409750 | MtrunA17_Chr4g0026721 | 35.000 | 180 | 89 | 4 | 223 | 397 | 3 | 159 | 7.25e-32 | 119 |
| Msa1409750 | MtrunA17_Chr6g0461621 | 39.231 | 130 | 75 | 2 | 2 | 128 | 91 | 219 | 9.95e-23 | 96.3 |
| Msa1409750 | MtrunA17_Chr4g0026861 | 34.677 | 124 | 80 | 1 | 5 | 128 | 92 | 214 | 1.53e-21 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409750 | AT5G04530.1 | 62.796 | 422 | 137 | 4 | 2 | 420 | 60 | 464 | 0.0 | 563 |
| Msa1409750 | AT2G28630.2 | 56.145 | 415 | 170 | 3 | 2 | 412 | 58 | 464 | 1.20e-170 | 487 |
| Msa1409750 | AT2G28630.1 | 56.145 | 415 | 170 | 3 | 2 | 412 | 58 | 464 | 1.20e-170 | 487 |
| Msa1409750 | AT1G07720.1 | 55.238 | 420 | 169 | 4 | 1 | 412 | 57 | 465 | 8.87e-165 | 472 |
| Msa1409750 | AT1G07720.2 | 55.238 | 420 | 169 | 4 | 1 | 412 | 100 | 508 | 1.40e-164 | 473 |
| Msa1409750 | AT2G15090.1 | 41.860 | 387 | 195 | 5 | 13 | 394 | 115 | 476 | 3.31e-107 | 325 |
| Msa1409750 | AT1G01120.1 | 42.105 | 380 | 190 | 5 | 21 | 394 | 168 | 523 | 5.98e-107 | 326 |
| Msa1409750 | AT1G19440.1 | 40.874 | 389 | 200 | 6 | 11 | 394 | 148 | 511 | 3.04e-106 | 324 |
| Msa1409750 | AT2G46720.1 | 39.386 | 391 | 210 | 4 | 9 | 394 | 94 | 462 | 3.35e-106 | 322 |
| Msa1409750 | AT4G34510.1 | 41.602 | 387 | 203 | 4 | 10 | 394 | 117 | 482 | 4.44e-106 | 323 |
| Msa1409750 | AT4G34250.1 | 42.377 | 387 | 193 | 6 | 13 | 394 | 123 | 484 | 4.85e-105 | 320 |
| Msa1409750 | AT2G16280.1 | 41.192 | 386 | 203 | 4 | 11 | 394 | 144 | 507 | 3.08e-104 | 318 |
| Msa1409750 | AT1G25450.1 | 40.885 | 384 | 203 | 5 | 13 | 394 | 122 | 483 | 3.53e-103 | 315 |
| Msa1409750 | AT1G68530.1 | 40.365 | 384 | 205 | 5 | 13 | 394 | 127 | 488 | 6.45e-102 | 312 |
| Msa1409750 | AT4G34520.1 | 40.827 | 387 | 200 | 5 | 13 | 394 | 125 | 487 | 7.67e-102 | 312 |
| Msa1409750 | AT2G26250.1 | 39.340 | 394 | 230 | 4 | 9 | 394 | 155 | 547 | 2.05e-101 | 313 |
| Msa1409750 | AT1G04220.1 | 40.247 | 405 | 209 | 8 | 2 | 394 | 129 | 512 | 1.88e-100 | 309 |
| Msa1409750 | AT3G10280.1 | 38.107 | 391 | 208 | 5 | 9 | 394 | 94 | 455 | 3.10e-99 | 304 |
| Msa1409750 | AT2G26640.1 | 40.360 | 389 | 207 | 4 | 9 | 394 | 134 | 500 | 6.21e-99 | 305 |
| Msa1409750 | AT5G43760.1 | 39.851 | 404 | 211 | 6 | 2 | 394 | 135 | 517 | 1.07e-98 | 305 |
| Msa1409750 | AT1G71160.1 | 39.175 | 388 | 211 | 5 | 9 | 394 | 81 | 445 | 1.25e-95 | 295 |
| Msa1409750 | AT5G49070.1 | 37.811 | 402 | 219 | 5 | 6 | 399 | 82 | 460 | 2.86e-91 | 284 |
| Msa1409750 | AT3G52160.2 | 30.846 | 402 | 212 | 5 | 1 | 402 | 1 | 336 | 1.64e-67 | 218 |
| Msa1409750 | AT3G52160.1 | 31.579 | 380 | 207 | 4 | 1 | 380 | 114 | 440 | 3.48e-66 | 218 |
| Msa1409750 | AT1G68530.2 | 38.645 | 251 | 152 | 2 | 13 | 263 | 127 | 375 | 2.39e-59 | 198 |
| Msa1409750 | AT5G49070.2 | 37.021 | 235 | 141 | 2 | 6 | 237 | 82 | 312 | 4.48e-44 | 156 |
Find 69 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCAAAGATTCTCCCATTT+TGG | 0.117044 | tig0023536:-85743 | Msa1409750:CDS |
| CCTCCCAACATATTAAATTT+AGG | 0.181690 | tig0023536:+85615 | None:intergenic |
| CTTCCTTCAAGAACGTTTCT+TGG | 0.199155 | tig0023536:+86362 | None:intergenic |
| TCCCAAAATGGGAGAATCTT+TGG | 0.263372 | tig0023536:+85741 | None:intergenic |
| GACAGTAAATTTACAGTCTA+TGG | 0.278528 | tig0023536:-85766 | Msa1409750:CDS |
| AAAGGATTATTGAGTGTATC+TGG | 0.291860 | tig0023536:+85267 | None:intergenic |
| ATACTTCTGCTGGTGGATTA+TGG | 0.292782 | tig0023536:-85452 | Msa1409750:CDS |
| AGCAGATTTAACAAGACTTT+TGG | 0.328960 | tig0023536:+85800 | None:intergenic |
| AACCTGACCAGTTCCCAAAA+TGG | 0.338184 | tig0023536:+85729 | None:intergenic |
| TTAAGTGTAATAATTGTGTT+TGG | 0.339072 | tig0023536:-85350 | Msa1409750:CDS |
| GGTGGTAGGGCAGTTATTGA+TGG | 0.340936 | tig0023536:-85546 | Msa1409750:CDS |
| GTCTTCAATCTTGCAGGAAT+GGG | 0.346369 | tig0023536:-86140 | Msa1409750:CDS |
| AGTTATTGATGGGGTTGGTA+AGG | 0.349662 | tig0023536:-85535 | Msa1409750:CDS |
| GTAAAAGTCTTCAATCTTGC+AGG | 0.353247 | tig0023536:-86146 | Msa1409750:CDS |
| CTTAAAACCATGGTTAGTTC+AGG | 0.363565 | tig0023536:-86407 | Msa1409750:CDS |
| ATTTGTCTGATACTAATGTT+TGG | 0.369574 | tig0023536:-85314 | Msa1409750:CDS |
| AAACCTAAATTTAATATGTT+GGG | 0.383049 | tig0023536:-85618 | Msa1409750:CDS |
| CCCAAAATGGGAGAATCTTT+GGG | 0.386365 | tig0023536:+85742 | None:intergenic |
| AAAACCTAAATTTAATATGT+TGG | 0.386628 | tig0023536:-85619 | Msa1409750:CDS |
| TAGGATGGCACTTCATCGTT+GGG | 0.405904 | tig0023536:-85478 | Msa1409750:CDS |
| TTGATGATTAGTCTTGGAGC+TGG | 0.423250 | tig0023536:-85375 | Msa1409750:CDS |
| AAAACATATGAAAATTCCCT+TGG | 0.437613 | tig0023536:-86071 | Msa1409750:CDS |
| CAGAAGATCTTGGCTCTCAT+TGG | 0.438630 | tig0023536:-86034 | Msa1409750:CDS |
| GTTATTGATGGGGTTGGTAA+GGG | 0.442438 | tig0023536:-85534 | Msa1409750:CDS |
| ACCTGACCAGTTCCCAAAAT+GGG | 0.447146 | tig0023536:+85730 | None:intergenic |
| GTGGTAGGGCAGTTATTGAT+GGG | 0.447295 | tig0023536:-85545 | Msa1409750:CDS |
| ATATCTTAGCTTTGTGAGGT+TGG | 0.447838 | tig0023536:-85214 | Msa1409750:CDS |
| TTGTGTTTGGGAAGTTATGA+AGG | 0.449292 | tig0023536:-85337 | Msa1409750:CDS |
| TGTCCAAGAAACGTTCTTGA+AGG | 0.449388 | tig0023536:-86365 | Msa1409750:CDS |
| TTTGTGTTCATCCTGGTGGT+AGG | 0.458457 | tig0023536:-85560 | Msa1409750:CDS |
| TCATATGTGTCTTTAAGAGT+TGG | 0.461513 | tig0023536:+86329 | None:intergenic |
| AGAGGCTTAAGAAAGGTGAT+AGG | 0.463294 | tig0023536:-85401 | Msa1409750:CDS |
| CATGTGTTTCAGTTTCAAGA+TGG | 0.463864 | tig0023536:+85911 | None:intergenic |
| TAAATTTAATATGTTGGGAG+GGG | 0.470603 | tig0023536:-85613 | Msa1409750:CDS |
| TAAGTGTAATAATTGTGTTT+GGG | 0.472156 | tig0023536:-85349 | Msa1409750:CDS |
| CGATGAAGTGCCATCCTAGC+TGG | 0.483902 | tig0023536:+85483 | None:intergenic |
| AGTCTTCAATCTTGCAGGAA+TGG | 0.484453 | tig0023536:-86141 | Msa1409750:CDS |
| CACATGGAAAGAACACAGTA+TGG | 0.488505 | tig0023536:-85894 | Msa1409750:CDS |
| TTGTGTTCATCCTGGTGGTA+GGG | 0.491562 | tig0023536:-85559 | Msa1409750:CDS |
| CTAGGATGGCACTTCATCGT+TGG | 0.495311 | tig0023536:-85479 | Msa1409750:CDS |
| CGTTGGGGTAATACTTCTGC+TGG | 0.498272 | tig0023536:-85462 | Msa1409750:CDS |
| TGATGATTAGTCTTGGAGCT+GGG | 0.508912 | tig0023536:-85374 | Msa1409750:CDS |
| ACCATGGTTAGTTCAGGAAT+CGG | 0.511336 | tig0023536:-86401 | Msa1409750:CDS |
| TGATCTTGAGCCAGCTAGGA+TGG | 0.522671 | tig0023536:-85493 | Msa1409750:CDS |
| GTTGTGAGCACAGAAGATCT+TGG | 0.526835 | tig0023536:-86044 | Msa1409750:CDS |
| AAATTTAATATGTTGGGAGG+GGG | 0.527603 | tig0023536:-85612 | Msa1409750:CDS |
| CCTAAATTTAATATGTTGGG+AGG | 0.527989 | tig0023536:-85615 | Msa1409750:CDS |
| CTAAATTTAATATGTTGGGA+GGG | 0.529020 | tig0023536:-85614 | Msa1409750:CDS |
| ATTATTCTTGCTGTGAGTGA+AGG | 0.536137 | tig0023536:+86194 | None:intergenic |
| AATATGATCTTGAGCCAGCT+AGG | 0.540062 | tig0023536:-85497 | Msa1409750:CDS |
| CTGTGCTCACAACAATTCCA+AGG | 0.544367 | tig0023536:+86054 | None:intergenic |
| TTACAATTGTTGCATACAAG+TGG | 0.555295 | tig0023536:-85856 | Msa1409750:CDS |
| AGGGCAGTTATTGATGGGGT+TGG | 0.556135 | tig0023536:-85540 | Msa1409750:CDS |
| ATACAAGTGGAAGATGAAGA+AGG | 0.560414 | tig0023536:-85843 | Msa1409750:CDS |
| TAGATTCCTCCTTAAAACCA+TGG | 0.562273 | tig0023536:-86417 | Msa1409750:CDS |
| TGGGGTAATACTTCTGCTGG+TGG | 0.565909 | tig0023536:-85459 | Msa1409750:CDS |
| TCAATAACTGCCCTACCACC+AGG | 0.573692 | tig0023536:+85549 | None:intergenic |
| ACAAGAATGTCTATTTCTGA+AGG | 0.580320 | tig0023536:+86245 | None:intergenic |
| CTTGCTGTGAGTGAAGGTGC+TGG | 0.586342 | tig0023536:+86200 | None:intergenic |
| ATCTAAATTCCTCAAGACCT+AGG | 0.588769 | tig0023536:+86435 | None:intergenic |
| ACCGATTCCTGAACTAACCA+TGG | 0.589832 | tig0023536:+86400 | None:intergenic |
| ATGAATATCTTAGCTTTGTG+AGG | 0.604029 | tig0023536:-85218 | Msa1409750:CDS |
| CTTGGCTCTCATTGGTACTG+TGG | 0.621208 | tig0023536:-86026 | Msa1409750:CDS |
| TCTTCAATCTTGCAGGAATG+GGG | 0.635113 | tig0023536:-86139 | Msa1409750:CDS |
| CATCTTGAAACTGAAACACA+TGG | 0.639110 | tig0023536:-85910 | Msa1409750:CDS |
| TGGTAGGGCAGTTATTGATG+GGG | 0.644981 | tig0023536:-85544 | Msa1409750:CDS |
| TGTGCTCACAACAATTCCAA+GGG | 0.652013 | tig0023536:+86055 | None:intergenic |
| AGGATGGCACTTCATCGTTG+GGG | 0.671813 | tig0023536:-85477 | Msa1409750:CDS |
| GGATTATTGAGTGTATCTGG+AGG | 0.693373 | tig0023536:+85270 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACCTAAATTTAATATGT+TGG | - | tig0023536:86018-86037 | Msa1409750:CDS | 15.0% |
| !! | AAACCTAAATTTAATATGTT+GGG | - | tig0023536:86019-86038 | Msa1409750:CDS | 15.0% |
| !! | AAAACCTAAATTTAATATGT+TGG | - | tig0023536:86018-86037 | Msa1409750:CDS | 15.0% |
| !! | AAACCTAAATTTAATATGTT+GGG | - | tig0023536:86019-86038 | Msa1409750:CDS | 15.0% |
| !! | AGTATGAAAAAAGTTGAATT+TGG | - | tig0023536:85953-85972 | Msa1409750:CDS | 20.0% |
| !!! | TTTATTTTGTTTTTGAACCT+TGG | - | tig0023536:85983-86002 | Msa1409750:CDS | 20.0% |
| !! | TTAAGTGTAATAATTGTGTT+TGG | - | tig0023536:86287-86306 | Msa1409750:CDS | 20.0% |
| !! | TAAGTGTAATAATTGTGTTT+GGG | - | tig0023536:86288-86307 | Msa1409750:CDS | 20.0% |
| !!! | CAATTATACTTTTCCTTAAA+AGG | + | tig0023536:86391-86410 | None:intergenic | 20.0% |
| !!! | CTTTTAAGGAAAAGTATAAT+TGG | - | tig0023536:86389-86408 | Msa1409750:CDS | 20.0% |
| !! | AGTATGAAAAAAGTTGAATT+TGG | - | tig0023536:85953-85972 | Msa1409750:CDS | 20.0% |
| !!! | TTTATTTTGTTTTTGAACCT+TGG | - | tig0023536:85983-86002 | Msa1409750:CDS | 20.0% |
| !! | TTAAGTGTAATAATTGTGTT+TGG | - | tig0023536:86287-86306 | Msa1409750:CDS | 20.0% |
| !! | TAAGTGTAATAATTGTGTTT+GGG | - | tig0023536:86288-86307 | Msa1409750:CDS | 20.0% |
| !!! | CAATTATACTTTTCCTTAAA+AGG | + | tig0023536:86391-86410 | None:intergenic | 20.0% |
| !!! | CTTTTAAGGAAAAGTATAAT+TGG | - | tig0023536:86389-86408 | Msa1409750:CDS | 20.0% |
| !!! | AGAAACATGTTTTTTTGAAG+AGG | + | tig0023536:85370-85389 | None:intergenic | 25.0% |
| ! | AAAACATATGAAAATTCCCT+TGG | - | tig0023536:85566-85585 | Msa1409750:CDS | 25.0% |
| !! | GTTTTATAACCATTTTACCA+AGG | + | tig0023536:86003-86022 | None:intergenic | 25.0% |
| ! | CTAAATTTAATATGTTGGGA+GGG | - | tig0023536:86023-86042 | Msa1409750:CDS | 25.0% |
| ! | TAAATTTAATATGTTGGGAG+GGG | - | tig0023536:86024-86043 | Msa1409750:CDS | 25.0% |
| !!! | ATGGTATGTTTTAGGTTATA+TGG | - | tig0023536:86204-86223 | Msa1409750:CDS | 25.0% |
| ! | ATTTGTCTGATACTAATGTT+TGG | - | tig0023536:86323-86342 | Msa1409750:CDS | 25.0% |
| !! | TACACTCAATAATCCTTTTA+AGG | - | tig0023536:86375-86394 | Msa1409750:CDS | 25.0% |
| !!! | AGAAACATGTTTTTTTGAAG+AGG | + | tig0023536:85370-85389 | None:intergenic | 25.0% |
| ! | AAAACATATGAAAATTCCCT+TGG | - | tig0023536:85566-85585 | Msa1409750:CDS | 25.0% |
| !! | GTTTTATAACCATTTTACCA+AGG | + | tig0023536:86003-86022 | None:intergenic | 25.0% |
| ! | CTAAATTTAATATGTTGGGA+GGG | - | tig0023536:86023-86042 | Msa1409750:CDS | 25.0% |
| ! | TAAATTTAATATGTTGGGAG+GGG | - | tig0023536:86024-86043 | Msa1409750:CDS | 25.0% |
| !!! | ATGGTATGTTTTAGGTTATA+TGG | - | tig0023536:86204-86223 | Msa1409750:CDS | 25.0% |
| ! | ATTTGTCTGATACTAATGTT+TGG | - | tig0023536:86323-86342 | Msa1409750:CDS | 25.0% |
| !! | TACACTCAATAATCCTTTTA+AGG | - | tig0023536:86375-86394 | Msa1409750:CDS | 25.0% |
| ! | TCATATGTGTCTTTAAGAGT+TGG | + | tig0023536:85311-85330 | None:intergenic | 30.0% |
| !! | ACAAGAATGTCTATTTCTGA+AGG | + | tig0023536:85395-85414 | None:intergenic | 30.0% |
| !!! | TGTTTTGTTTGTGAAAAGCA+TGG | + | tig0023536:85690-85709 | None:intergenic | 30.0% |
| TTACAATTGTTGCATACAAG+TGG | - | tig0023536:85781-85800 | Msa1409750:CDS | 30.0% | |
| ! | AGCAGATTTAACAAGACTTT+TGG | + | tig0023536:85840-85859 | None:intergenic | 30.0% |
| GACAGTAAATTTACAGTCTA+TGG | - | tig0023536:85871-85890 | Msa1409750:CDS | 30.0% | |
| ! | GTTTTTGAACCTTGGTAAAA+TGG | - | tig0023536:85991-86010 | Msa1409750:CDS | 30.0% |
| CCTCCCAACATATTAAATTT+AGG | + | tig0023536:86025-86044 | None:intergenic | 30.0% | |
| CCTAAATTTAATATGTTGGG+AGG | - | tig0023536:86022-86041 | Msa1409750:CDS | 30.0% | |
| AAATTTAATATGTTGGGAGG+GGG | - | tig0023536:86025-86044 | Msa1409750:CDS | 30.0% | |
| GTTATATGGAAGCAAAAAAG+AGG | - | tig0023536:86218-86237 | Msa1409750:CDS | 30.0% | |
| !!! | AGGATTTTGATGATTAGTCT+TGG | - | tig0023536:86256-86275 | Msa1409750:CDS | 30.0% |
| AAAGGATTATTGAGTGTATC+TGG | + | tig0023536:86373-86392 | None:intergenic | 30.0% | |
| !! | ATGAATATCTTAGCTTTGTG+AGG | - | tig0023536:86419-86438 | Msa1409750:CDS | 30.0% |
| ! | TCATATGTGTCTTTAAGAGT+TGG | + | tig0023536:85311-85330 | None:intergenic | 30.0% |
| !! | ACAAGAATGTCTATTTCTGA+AGG | + | tig0023536:85395-85414 | None:intergenic | 30.0% |
| !!! | TGTTTTGTTTGTGAAAAGCA+TGG | + | tig0023536:85690-85709 | None:intergenic | 30.0% |
| TTACAATTGTTGCATACAAG+TGG | - | tig0023536:85781-85800 | Msa1409750:CDS | 30.0% | |
| ! | AGCAGATTTAACAAGACTTT+TGG | + | tig0023536:85840-85859 | None:intergenic | 30.0% |
| GACAGTAAATTTACAGTCTA+TGG | - | tig0023536:85871-85890 | Msa1409750:CDS | 30.0% | |
| ! | GTTTTTGAACCTTGGTAAAA+TGG | - | tig0023536:85991-86010 | Msa1409750:CDS | 30.0% |
| CCTCCCAACATATTAAATTT+AGG | + | tig0023536:86025-86044 | None:intergenic | 30.0% | |
| CCTAAATTTAATATGTTGGG+AGG | - | tig0023536:86022-86041 | Msa1409750:CDS | 30.0% | |
| AAATTTAATATGTTGGGAGG+GGG | - | tig0023536:86025-86044 | Msa1409750:CDS | 30.0% | |
| GTTATATGGAAGCAAAAAAG+AGG | - | tig0023536:86218-86237 | Msa1409750:CDS | 30.0% | |
| !!! | AGGATTTTGATGATTAGTCT+TGG | - | tig0023536:86256-86275 | Msa1409750:CDS | 30.0% |
| AAAGGATTATTGAGTGTATC+TGG | + | tig0023536:86373-86392 | None:intergenic | 30.0% | |
| !! | ATGAATATCTTAGCTTTGTG+AGG | - | tig0023536:86419-86438 | Msa1409750:CDS | 30.0% |
| AAACAAAAACCTAGGTCTTG+AGG | - | tig0023536:85193-85212 | Msa1409750:CDS | 35.0% | |
| ATCTAAATTCCTCAAGACCT+AGG | + | tig0023536:85205-85224 | None:intergenic | 35.0% | |
| TAGATTCCTCCTTAAAACCA+TGG | - | tig0023536:85220-85239 | Msa1409750:CDS | 35.0% | |
| !!! | AACTAACCATGGTTTTAAGG+AGG | + | tig0023536:85229-85248 | None:intergenic | 35.0% |
| !! | CTGAACTAACCATGGTTTTA+AGG | + | tig0023536:85232-85251 | None:intergenic | 35.0% |
| ! | CTTAAAACCATGGTTAGTTC+AGG | - | tig0023536:85230-85249 | Msa1409750:CDS | 35.0% |
| ! | ATTATTCTTGCTGTGAGTGA+AGG | + | tig0023536:85446-85465 | None:intergenic | 35.0% |
| GTAAAAGTCTTCAATCTTGC+AGG | - | tig0023536:85491-85510 | Msa1409750:CDS | 35.0% | |
| CATGTGTTTCAGTTTCAAGA+TGG | + | tig0023536:85729-85748 | None:intergenic | 35.0% | |
| CATCTTGAAACTGAAACACA+TGG | - | tig0023536:85727-85746 | Msa1409750:CDS | 35.0% | |
| ATACAAGTGGAAGATGAAGA+AGG | - | tig0023536:85794-85813 | Msa1409750:CDS | 35.0% | |
| ! | GAACATTTTTGTGTTCATCC+TGG | - | tig0023536:86070-86089 | Msa1409750:CDS | 35.0% |
| !!! | GGTGGATTATGGTATGTTTT+AGG | - | tig0023536:86196-86215 | Msa1409750:CDS | 35.0% |
| GCAAAAAAGAGGCTTAAGAA+AGG | - | tig0023536:86229-86248 | Msa1409750:CDS | 35.0% | |
| TTGTGTTTGGGAAGTTATGA+AGG | - | tig0023536:86300-86319 | Msa1409750:CDS | 35.0% | |
| !! | ATATCTTAGCTTTGTGAGGT+TGG | - | tig0023536:86423-86442 | Msa1409750:CDS | 35.0% |
| !! | GAGGTTGGATTTTAGTACTA+TGG | - | tig0023536:86438-86457 | Msa1409750:CDS | 35.0% |
| AAACAAAAACCTAGGTCTTG+AGG | - | tig0023536:85193-85212 | Msa1409750:CDS | 35.0% | |
| ATCTAAATTCCTCAAGACCT+AGG | + | tig0023536:85205-85224 | None:intergenic | 35.0% | |
| TAGATTCCTCCTTAAAACCA+TGG | - | tig0023536:85220-85239 | Msa1409750:CDS | 35.0% | |
| !!! | AACTAACCATGGTTTTAAGG+AGG | + | tig0023536:85229-85248 | None:intergenic | 35.0% |
| !! | CTGAACTAACCATGGTTTTA+AGG | + | tig0023536:85232-85251 | None:intergenic | 35.0% |
| ! | CTTAAAACCATGGTTAGTTC+AGG | - | tig0023536:85230-85249 | Msa1409750:CDS | 35.0% |
| ! | ATTATTCTTGCTGTGAGTGA+AGG | + | tig0023536:85446-85465 | None:intergenic | 35.0% |
| GTAAAAGTCTTCAATCTTGC+AGG | - | tig0023536:85491-85510 | Msa1409750:CDS | 35.0% | |
| CATGTGTTTCAGTTTCAAGA+TGG | + | tig0023536:85729-85748 | None:intergenic | 35.0% | |
| CATCTTGAAACTGAAACACA+TGG | - | tig0023536:85727-85746 | Msa1409750:CDS | 35.0% | |
| ATACAAGTGGAAGATGAAGA+AGG | - | tig0023536:85794-85813 | Msa1409750:CDS | 35.0% | |
| ! | GAACATTTTTGTGTTCATCC+TGG | - | tig0023536:86070-86089 | Msa1409750:CDS | 35.0% |
| !!! | GGTGGATTATGGTATGTTTT+AGG | - | tig0023536:86196-86215 | Msa1409750:CDS | 35.0% |
| GCAAAAAAGAGGCTTAAGAA+AGG | - | tig0023536:86229-86248 | Msa1409750:CDS | 35.0% | |
| TTGTGTTTGGGAAGTTATGA+AGG | - | tig0023536:86300-86319 | Msa1409750:CDS | 35.0% | |
| !! | ATATCTTAGCTTTGTGAGGT+TGG | - | tig0023536:86423-86442 | Msa1409750:CDS | 35.0% |
| !! | GAGGTTGGATTTTAGTACTA+TGG | - | tig0023536:86438-86457 | Msa1409750:CDS | 35.0% |
| ! | ACCATGGTTAGTTCAGGAAT+CGG | - | tig0023536:85236-85255 | Msa1409750:CDS | 40.0% |
| TGTCCAAGAAACGTTCTTGA+AGG | - | tig0023536:85272-85291 | Msa1409750:CDS | 40.0% | |
| CTTCCTTCAAGAACGTTTCT+TGG | + | tig0023536:85278-85297 | None:intergenic | 40.0% | |
| AGTCTTCAATCTTGCAGGAA+TGG | - | tig0023536:85496-85515 | Msa1409750:CDS | 40.0% | |
| GTCTTCAATCTTGCAGGAAT+GGG | - | tig0023536:85497-85516 | Msa1409750:CDS | 40.0% | |
| TCTTCAATCTTGCAGGAATG+GGG | - | tig0023536:85498-85517 | Msa1409750:CDS | 40.0% | |
| TGTGCTCACAACAATTCCAA+GGG | + | tig0023536:85585-85604 | None:intergenic | 40.0% | |
| !!! | TCTAACTGTCTTTTTCGAGC+AGG | - | tig0023536:85656-85675 | Msa1409750:CDS | 40.0% |
| CACATGGAAAGAACACAGTA+TGG | - | tig0023536:85743-85762 | Msa1409750:CDS | 40.0% | |
| ! | GAAGATGAAGAAGGTTTTGC+AGG | - | tig0023536:85803-85822 | Msa1409750:CDS | 40.0% |
| ! | TCCCAAAGATTCTCCCATTT+TGG | - | tig0023536:85894-85913 | Msa1409750:CDS | 40.0% |
| CCCAAAATGGGAGAATCTTT+GGG | + | tig0023536:85898-85917 | None:intergenic | 40.0% | |
| ! | CCCAAAGATTCTCCCATTTT+GGG | - | tig0023536:85895-85914 | Msa1409750:CDS | 40.0% |
| TCCCAAAATGGGAGAATCTT+TGG | + | tig0023536:85899-85918 | None:intergenic | 40.0% | |
| GGGGGTTTGAATTTGAAAAG+TGG | - | tig0023536:86043-86062 | Msa1409750:CDS | 40.0% | |
| ! | CATTTTTGTGTTCATCCTGG+TGG | - | tig0023536:86073-86092 | Msa1409750:CDS | 40.0% |
| !! | AGTTATTGATGGGGTTGGTA+AGG | - | tig0023536:86102-86121 | Msa1409750:CDS | 40.0% |
| !! | GTTATTGATGGGGTTGGTAA+GGG | - | tig0023536:86103-86122 | Msa1409750:CDS | 40.0% |
| AATATGATCTTGAGCCAGCT+AGG | - | tig0023536:86140-86159 | Msa1409750:CDS | 40.0% | |
| !! | ATACTTCTGCTGGTGGATTA+TGG | - | tig0023536:86185-86204 | Msa1409750:CDS | 40.0% |
| AGAGGCTTAAGAAAGGTGAT+AGG | - | tig0023536:86236-86255 | Msa1409750:CDS | 40.0% | |
| !! | TTGATGATTAGTCTTGGAGC+TGG | - | tig0023536:86262-86281 | Msa1409750:CDS | 40.0% |
| !! | TGATGATTAGTCTTGGAGCT+GGG | - | tig0023536:86263-86282 | Msa1409750:CDS | 40.0% |
| GGATTATTGAGTGTATCTGG+AGG | + | tig0023536:86370-86389 | None:intergenic | 40.0% | |
| ! | ACCATGGTTAGTTCAGGAAT+CGG | - | tig0023536:85236-85255 | Msa1409750:CDS | 40.0% |
| TGTCCAAGAAACGTTCTTGA+AGG | - | tig0023536:85272-85291 | Msa1409750:CDS | 40.0% | |
| CTTCCTTCAAGAACGTTTCT+TGG | + | tig0023536:85278-85297 | None:intergenic | 40.0% | |
| AGTCTTCAATCTTGCAGGAA+TGG | - | tig0023536:85496-85515 | Msa1409750:CDS | 40.0% | |
| GTCTTCAATCTTGCAGGAAT+GGG | - | tig0023536:85497-85516 | Msa1409750:CDS | 40.0% | |
| TCTTCAATCTTGCAGGAATG+GGG | - | tig0023536:85498-85517 | Msa1409750:CDS | 40.0% | |
| TGTGCTCACAACAATTCCAA+GGG | + | tig0023536:85585-85604 | None:intergenic | 40.0% | |
| !!! | TCTAACTGTCTTTTTCGAGC+AGG | - | tig0023536:85656-85675 | Msa1409750:CDS | 40.0% |
| CACATGGAAAGAACACAGTA+TGG | - | tig0023536:85743-85762 | Msa1409750:CDS | 40.0% | |
| ! | GAAGATGAAGAAGGTTTTGC+AGG | - | tig0023536:85803-85822 | Msa1409750:CDS | 40.0% |
| ! | TCCCAAAGATTCTCCCATTT+TGG | - | tig0023536:85894-85913 | Msa1409750:CDS | 40.0% |
| CCCAAAATGGGAGAATCTTT+GGG | + | tig0023536:85898-85917 | None:intergenic | 40.0% | |
| ! | CCCAAAGATTCTCCCATTTT+GGG | - | tig0023536:85895-85914 | Msa1409750:CDS | 40.0% |
| TCCCAAAATGGGAGAATCTT+TGG | + | tig0023536:85899-85918 | None:intergenic | 40.0% | |
| GGGGGTTTGAATTTGAAAAG+TGG | - | tig0023536:86043-86062 | Msa1409750:CDS | 40.0% | |
| ! | CATTTTTGTGTTCATCCTGG+TGG | - | tig0023536:86073-86092 | Msa1409750:CDS | 40.0% |
| !! | AGTTATTGATGGGGTTGGTA+AGG | - | tig0023536:86102-86121 | Msa1409750:CDS | 40.0% |
| !! | GTTATTGATGGGGTTGGTAA+GGG | - | tig0023536:86103-86122 | Msa1409750:CDS | 40.0% |
| AATATGATCTTGAGCCAGCT+AGG | - | tig0023536:86140-86159 | Msa1409750:CDS | 40.0% | |
| !! | ATACTTCTGCTGGTGGATTA+TGG | - | tig0023536:86185-86204 | Msa1409750:CDS | 40.0% |
| AGAGGCTTAAGAAAGGTGAT+AGG | - | tig0023536:86236-86255 | Msa1409750:CDS | 40.0% | |
| !! | TTGATGATTAGTCTTGGAGC+TGG | - | tig0023536:86262-86281 | Msa1409750:CDS | 40.0% |
| !! | TGATGATTAGTCTTGGAGCT+GGG | - | tig0023536:86263-86282 | Msa1409750:CDS | 40.0% |
| GGATTATTGAGTGTATCTGG+AGG | + | tig0023536:86370-86389 | None:intergenic | 40.0% | |
| ! | ACCGATTCCTGAACTAACCA+TGG | + | tig0023536:85240-85259 | None:intergenic | 45.0% |
| CTGTGCTCACAACAATTCCA+AGG | + | tig0023536:85586-85605 | None:intergenic | 45.0% | |
| GTTGTGAGCACAGAAGATCT+TGG | - | tig0023536:85593-85612 | Msa1409750:CDS | 45.0% | |
| ! | CAGAAGATCTTGGCTCTCAT+TGG | - | tig0023536:85603-85622 | Msa1409750:CDS | 45.0% |
| !!! | AACTGTCTTTTTCGAGCAGG+TGG | - | tig0023536:85659-85678 | Msa1409750:CDS | 45.0% |
| !! | GATTCTCCCATTTTGGGAAC+TGG | - | tig0023536:85901-85920 | Msa1409750:CDS | 45.0% |
| ACCTGACCAGTTCCCAAAAT+GGG | + | tig0023536:85910-85929 | None:intergenic | 45.0% | |
| AACCTGACCAGTTCCCAAAA+TGG | + | tig0023536:85911-85930 | None:intergenic | 45.0% | |
| TTTGTGTTCATCCTGGTGGT+AGG | - | tig0023536:86077-86096 | Msa1409750:CDS | 45.0% | |
| TTGTGTTCATCCTGGTGGTA+GGG | - | tig0023536:86078-86097 | Msa1409750:CDS | 45.0% | |
| GTGGTAGGGCAGTTATTGAT+GGG | - | tig0023536:86092-86111 | Msa1409750:CDS | 45.0% | |
| TGGTAGGGCAGTTATTGATG+GGG | - | tig0023536:86093-86112 | Msa1409750:CDS | 45.0% | |
| TAGGATGGCACTTCATCGTT+GGG | - | tig0023536:86159-86178 | Msa1409750:CDS | 45.0% | |
| ! | ACCGATTCCTGAACTAACCA+TGG | + | tig0023536:85240-85259 | None:intergenic | 45.0% |
| CTGTGCTCACAACAATTCCA+AGG | + | tig0023536:85586-85605 | None:intergenic | 45.0% | |
| GTTGTGAGCACAGAAGATCT+TGG | - | tig0023536:85593-85612 | Msa1409750:CDS | 45.0% | |
| ! | CAGAAGATCTTGGCTCTCAT+TGG | - | tig0023536:85603-85622 | Msa1409750:CDS | 45.0% |
| !!! | AACTGTCTTTTTCGAGCAGG+TGG | - | tig0023536:85659-85678 | Msa1409750:CDS | 45.0% |
| !! | GATTCTCCCATTTTGGGAAC+TGG | - | tig0023536:85901-85920 | Msa1409750:CDS | 45.0% |
| ACCTGACCAGTTCCCAAAAT+GGG | + | tig0023536:85910-85929 | None:intergenic | 45.0% | |
| AACCTGACCAGTTCCCAAAA+TGG | + | tig0023536:85911-85930 | None:intergenic | 45.0% | |
| TTTGTGTTCATCCTGGTGGT+AGG | - | tig0023536:86077-86096 | Msa1409750:CDS | 45.0% | |
| TTGTGTTCATCCTGGTGGTA+GGG | - | tig0023536:86078-86097 | Msa1409750:CDS | 45.0% | |
| GTGGTAGGGCAGTTATTGAT+GGG | - | tig0023536:86092-86111 | Msa1409750:CDS | 45.0% | |
| TGGTAGGGCAGTTATTGATG+GGG | - | tig0023536:86093-86112 | Msa1409750:CDS | 45.0% | |
| TAGGATGGCACTTCATCGTT+GGG | - | tig0023536:86159-86178 | Msa1409750:CDS | 45.0% | |
| ! | CTTGGCTCTCATTGGTACTG+TGG | - | tig0023536:85611-85630 | Msa1409750:CDS | 50.0% |
| !! | TCCCATTTTGGGAACTGGTC+AGG | - | tig0023536:85906-85925 | Msa1409750:CDS | 50.0% |
| TCAATAACTGCCCTACCACC+AGG | + | tig0023536:86091-86110 | None:intergenic | 50.0% | |
| GGTGGTAGGGCAGTTATTGA+TGG | - | tig0023536:86091-86110 | Msa1409750:CDS | 50.0% | |
| AGGGCAGTTATTGATGGGGT+TGG | - | tig0023536:86097-86116 | Msa1409750:CDS | 50.0% | |
| TGATCTTGAGCCAGCTAGGA+TGG | - | tig0023536:86144-86163 | Msa1409750:CDS | 50.0% | |
| CTAGGATGGCACTTCATCGT+TGG | - | tig0023536:86158-86177 | Msa1409750:CDS | 50.0% | |
| AGGATGGCACTTCATCGTTG+GGG | - | tig0023536:86160-86179 | Msa1409750:CDS | 50.0% | |
| CGTTGGGGTAATACTTCTGC+TGG | - | tig0023536:86175-86194 | Msa1409750:CDS | 50.0% | |
| TGGGGTAATACTTCTGCTGG+TGG | - | tig0023536:86178-86197 | Msa1409750:CDS | 50.0% | |
| ! | CTTGGCTCTCATTGGTACTG+TGG | - | tig0023536:85611-85630 | Msa1409750:CDS | 50.0% |
| !! | TCCCATTTTGGGAACTGGTC+AGG | - | tig0023536:85906-85925 | Msa1409750:CDS | 50.0% |
| TCAATAACTGCCCTACCACC+AGG | + | tig0023536:86091-86110 | None:intergenic | 50.0% | |
| GGTGGTAGGGCAGTTATTGA+TGG | - | tig0023536:86091-86110 | Msa1409750:CDS | 50.0% | |
| AGGGCAGTTATTGATGGGGT+TGG | - | tig0023536:86097-86116 | Msa1409750:CDS | 50.0% | |
| TGATCTTGAGCCAGCTAGGA+TGG | - | tig0023536:86144-86163 | Msa1409750:CDS | 50.0% | |
| CTAGGATGGCACTTCATCGT+TGG | - | tig0023536:86158-86177 | Msa1409750:CDS | 50.0% | |
| AGGATGGCACTTCATCGTTG+GGG | - | tig0023536:86160-86179 | Msa1409750:CDS | 50.0% | |
| CGTTGGGGTAATACTTCTGC+TGG | - | tig0023536:86175-86194 | Msa1409750:CDS | 50.0% | |
| TGGGGTAATACTTCTGCTGG+TGG | - | tig0023536:86178-86197 | Msa1409750:CDS | 50.0% | |
| ! | CTTGCTGTGAGTGAAGGTGC+TGG | + | tig0023536:85440-85459 | None:intergenic | 55.0% |
| ! | CGATGAAGTGCCATCCTAGC+TGG | + | tig0023536:86157-86176 | None:intergenic | 55.0% |
| ! | CTTGCTGTGAGTGAAGGTGC+TGG | + | tig0023536:85440-85459 | None:intergenic | 55.0% |
| ! | CGATGAAGTGCCATCCTAGC+TGG | + | tig0023536:86157-86176 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023536 | gene | 85188 | 86471 | 85188 | ID=Msa1409750;Name=Msa1409750 |
| tig0023536 | mRNA | 85188 | 86471 | 85188 | ID=Msa1409750-mRNA-1;Parent=Msa1409750;Name=Msa1409750-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|427 |
| tig0023536 | exon | 85188 | 86471 | 85188 | ID=Msa1409750-mRNA-1:exon:26162;Parent=Msa1409750-mRNA-1 |
| tig0023536 | CDS | 85188 | 86471 | 85188 | ID=Msa1409750-mRNA-1:cds;Parent=Msa1409750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
