Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623170 | XP_013470473.1 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623170 | sp|Q9LZ72|KCS19_ARATH | 62.796 | 422 | 137 | 4 | 2 | 420 | 60 | 464 | 0.0 | 563 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623170 | A0A072VS55 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0623170 | 0.803977 | 2.694267e-49 | -8.615850e-47 |
| Msa0055280 | Msa0623170 | 0.838041 | 3.638429e-57 | -8.615850e-47 |
| Msa0094420 | Msa0623170 | 0.803771 | 2.972963e-49 | -8.615850e-47 |
| Msa0101060 | Msa0623170 | 0.829172 | 5.971370e-55 | -8.615850e-47 |
| Msa0620640 | Msa0623170 | 0.842077 | 3.222854e-58 | -8.615850e-47 |
| Msa0621890 | Msa0623170 | 0.819567 | 1.085371e-52 | -8.615850e-47 |
| Msa0623170 | Msa0646040 | -0.802158 | 6.406712e-49 | -8.615850e-47 |
| Msa0623170 | Msa0647000 | 0.800824 | 1.202207e-48 | -8.615850e-47 |
| Msa0623170 | Msa0678240 | 0.823324 | 1.472344e-53 | -8.615850e-47 |
| Msa0623170 | Msa0701770 | 0.807627 | 4.609379e-50 | -8.615850e-47 |
| Msa0623170 | Msa0703490 | 0.804103 | 2.536280e-49 | -8.615850e-47 |
| Msa0623170 | Msa0721150 | 0.840759 | 7.166495e-58 | -8.615850e-47 |
| Msa0623170 | Msa0730180 | 0.803526 | 3.342946e-49 | -8.615850e-47 |
| Msa0623170 | Msa0731710 | 0.801107 | 1.052253e-48 | -8.615850e-47 |
| Msa0623170 | Msa0734340 | 0.818878 | 1.557174e-52 | -8.615850e-47 |
| Msa0623170 | Msa0739570 | 0.802534 | 5.360490e-49 | -8.615850e-47 |
| Msa0623170 | Msa0740420 | 0.802300 | 5.989143e-49 | -8.615850e-47 |
| Msa0623170 | Msa0744450 | 0.806041 | 9.971563e-50 | -8.615850e-47 |
| Msa0623170 | Msa0752580 | 0.805085 | 1.582350e-49 | -8.615850e-47 |
| Msa0623170 | Msa0754500 | 0.803987 | 2.681794e-49 | -8.615850e-47 |
| Msa0623170 | Msa0756480 | 0.820160 | 7.944316e-53 | -8.615850e-47 |
| Msa0623170 | Msa0761760 | 0.835643 | 1.489025e-56 | -8.615850e-47 |
| Msa0623170 | Msa0772150 | 0.800665 | 1.295422e-48 | -8.615850e-47 |
| Msa0623170 | Msa0792510 | 0.838697 | 2.465638e-57 | -8.615850e-47 |
| Msa0623170 | Msa0804060 | 0.835385 | 1.730641e-56 | -8.615850e-47 |
| Msa0623170 | Msa0820670 | 0.806686 | 7.293636e-50 | -8.615850e-47 |
| Msa0623170 | Msa0830900 | 0.816041 | 6.782249e-52 | -8.615850e-47 |
| Msa0623170 | Msa0835510 | 0.821053 | 4.952836e-53 | -8.615850e-47 |
| Msa0623170 | Msa0842050 | 0.806028 | 1.003409e-49 | -8.615850e-47 |
| Msa0623170 | Msa0842240 | 0.830649 | 2.606904e-55 | -8.615850e-47 |
| Msa0623170 | Msa0853860 | 0.834490 | 2.907940e-56 | -8.615850e-47 |
| Msa0623170 | Msa0855520 | 0.810763 | 9.806010e-51 | -8.615850e-47 |
| Msa0623170 | Msa0860270 | 0.812380 | 4.363960e-51 | -8.615850e-47 |
| Msa0623170 | Msa0864950 | 0.816883 | 4.394647e-52 | -8.615850e-47 |
| Msa0623170 | Msa0880080 | 0.823143 | 1.623086e-53 | -8.615850e-47 |
| Msa0623170 | Msa0887070 | 0.803748 | 3.006342e-49 | -8.615850e-47 |
| Msa0623170 | Msa0903730 | 0.815926 | 7.198475e-52 | -8.615850e-47 |
| Msa0623170 | Msa0921630 | 0.848167 | 7.281745e-60 | -8.615850e-47 |
| Msa0623170 | Msa0951720 | 0.816165 | 6.364876e-52 | -8.615850e-47 |
| Msa0623170 | Msa0960270 | 0.845601 | 3.669194e-59 | -8.615850e-47 |
| Msa0623170 | Msa0973230 | 0.825954 | 3.537072e-54 | -8.615850e-47 |
| Msa0623170 | Msa0981010 | 0.801289 | 9.660194e-49 | -8.615850e-47 |
| Msa0623170 | Msa0994660 | 0.832171 | 1.100629e-55 | -8.615850e-47 |
| Msa0623170 | Msa1009000 | 0.822077 | 2.873497e-53 | -8.615850e-47 |
| Msa0623170 | Msa1018720 | 0.812834 | 3.473382e-51 | -8.615850e-47 |
| Msa0623170 | Msa1032350 | 0.805548 | 1.265921e-49 | -8.615850e-47 |
| Msa0623170 | Msa1036390 | 0.811527 | 6.695978e-51 | -8.615850e-47 |
| Msa0623170 | Msa1044040 | 0.805517 | 1.284851e-49 | -8.615850e-47 |
| Msa0623170 | Msa1069300 | 0.812431 | 4.255366e-51 | -8.615850e-47 |
| Msa0623170 | Msa1072350 | 0.808242 | 3.409463e-50 | -8.615850e-47 |
| Msa0623170 | Msa1076680 | 0.814671 | 1.368438e-51 | -8.615850e-47 |
| Msa0623170 | Msa1081600 | 0.843129 | 1.694388e-58 | -8.615850e-47 |
| Msa0623170 | Msa1118140 | 0.807267 | 5.493487e-50 | -8.615850e-47 |
| Msa0623170 | Msa1125040 | 0.813047 | 3.118557e-51 | -8.615850e-47 |
| Msa0623170 | Msa1132560 | -0.813841 | 2.086576e-51 | -8.615850e-47 |
| Msa0623170 | Msa1151960 | 0.809458 | 1.873780e-50 | -8.615850e-47 |
| Msa0623170 | Msa1154820 | 0.804129 | 2.505670e-49 | -8.615850e-47 |
| Msa0623170 | Msa1159360 | 0.811621 | 6.387430e-51 | -8.615850e-47 |
| Msa0623170 | Msa1166370 | 0.840277 | 9.578643e-58 | -8.615850e-47 |
| Msa0623170 | Msa1167400 | 0.813075 | 3.074478e-51 | -8.615850e-47 |
| Msa0623170 | Msa1201610 | 0.803451 | 3.465142e-49 | -8.615850e-47 |
| Msa0623170 | Msa1201990 | 0.816632 | 5.004661e-52 | -8.615850e-47 |
| Msa0623170 | Msa1213020 | 0.822235 | 2.641000e-53 | -8.615850e-47 |
| Msa0623170 | Msa1220230 | 0.805211 | 1.489468e-49 | -8.615850e-47 |
| Msa0623170 | Msa1221200 | -0.804578 | 2.019270e-49 | -8.615850e-47 |
| Msa0623170 | Msa1221260 | 0.825806 | 3.833845e-54 | -8.615850e-47 |
| Msa0623170 | Msa1226600 | 0.802438 | 5.611177e-49 | -8.615850e-47 |
| Msa0623170 | Msa1226640 | 0.822308 | 2.539169e-53 | -8.615850e-47 |
| Msa0623170 | Msa1238480 | 0.827938 | 1.186689e-54 | -8.615850e-47 |
| Msa0623170 | Msa1243130 | 0.825366 | 4.874051e-54 | -8.615850e-47 |
| Msa0623170 | Msa1254470 | 0.833722 | 4.529391e-56 | -8.615850e-47 |
| Msa0623170 | Msa1254770 | 0.825911 | 3.620565e-54 | -8.615850e-47 |
| Msa0623170 | Msa1254800 | 0.819754 | 9.836870e-53 | -8.615850e-47 |
| Msa0623170 | Msa1258280 | 0.808581 | 2.886864e-50 | -8.615850e-47 |
| Msa0623170 | Msa1279860 | 0.808272 | 3.359922e-50 | -8.615850e-47 |
| Msa0623170 | Msa1295010 | 0.816676 | 4.890778e-52 | -8.615850e-47 |
| Msa0623170 | Msa1298290 | 0.812582 | 3.943242e-51 | -8.615850e-47 |
| Msa0623170 | Msa1300090 | 0.823573 | 1.288112e-53 | -8.615850e-47 |
| Msa0623170 | Msa1302150 | 0.803415 | 3.525161e-49 | -8.615850e-47 |
| Msa0623170 | Msa1329990 | 0.820011 | 8.590302e-53 | -8.615850e-47 |
| Msa0623170 | Msa1337190 | 0.809292 | 2.033848e-50 | -8.615850e-47 |
| Msa0623170 | Msa1337340 | 0.806901 | 6.566546e-50 | -8.615850e-47 |
| Msa0623170 | Msa1358870 | -0.801346 | 9.405064e-49 | -8.615850e-47 |
| Msa0623170 | Msa1363890 | 0.806369 | 8.505231e-50 | -8.615850e-47 |
| Msa0623170 | Msa1373950 | 0.839847 | 1.240287e-57 | -8.615850e-47 |
| Msa0623170 | Msa1397540 | 0.804585 | 2.013188e-49 | -8.615850e-47 |
| Msa0623170 | Msa1399500 | 0.998130 | 7.056047e-257 | -8.615850e-47 |
| Msa0623170 | Msa1405470 | 0.807253 | 5.533645e-50 | -8.615850e-47 |
| Msa0623170 | Msa1409750 | 0.997008 | 1.833564e-235 | -8.615850e-47 |
| Msa0623170 | Msa1423080 | 0.822518 | 2.269117e-53 | -8.615850e-47 |
| Msa0623170 | Msa1447160 | -0.852550 | 4.290110e-61 | -8.615850e-47 |
| Msa0623170 | Msa1460310 | -0.815084 | 1.107821e-51 | -8.615850e-47 |
| Msa0139720 | Msa0623170 | -0.812905 | 3.350552e-51 | -8.615850e-47 |
| Msa0140910 | Msa0623170 | 0.816709 | 4.807674e-52 | -8.615850e-47 |
| Msa0164660 | Msa0623170 | 0.809507 | 1.828623e-50 | -8.615850e-47 |
| Msa0165430 | Msa0623170 | 0.803252 | 3.809658e-49 | -8.615850e-47 |
| Msa0169960 | Msa0623170 | 0.811681 | 6.199275e-51 | -8.615850e-47 |
| Msa0190980 | Msa0623170 | 0.800851 | 1.187377e-48 | -8.615850e-47 |
| Msa0197750 | Msa0623170 | -0.830282 | 3.206974e-55 | -8.615850e-47 |
| Msa0208390 | Msa0623170 | 0.801699 | 7.958549e-49 | -8.615850e-47 |
| Msa0211010 | Msa0623170 | 0.822055 | 2.907357e-53 | -8.615850e-47 |
| Msa0213080 | Msa0623170 | 0.845277 | 4.490703e-59 | -8.615850e-47 |
| Msa0213090 | Msa0623170 | 0.820465 | 6.763196e-53 | -8.615850e-47 |
| Msa0219660 | Msa0623170 | 0.815390 | 9.473044e-52 | -8.615850e-47 |
| Msa0227800 | Msa0623170 | 0.808075 | 3.701071e-50 | -8.615850e-47 |
| Msa0232860 | Msa0623170 | 0.821367 | 4.191829e-53 | -8.615850e-47 |
| Msa0365360 | Msa0623170 | 0.810233 | 1.275923e-50 | -8.615850e-47 |
| Msa0371610 | Msa0623170 | 0.843971 | 1.009155e-58 | -8.615850e-47 |
| Msa0409820 | Msa0623170 | 0.812853 | 3.439144e-51 | -8.615850e-47 |
| Msa0413740 | Msa0623170 | 0.813817 | 2.112596e-51 | -8.615850e-47 |
| Msa0418000 | Msa0623170 | 0.811957 | 5.397829e-51 | -8.615850e-47 |
| Msa0420070 | Msa0623170 | 0.829324 | 5.484885e-55 | -8.615850e-47 |
| Msa0442880 | Msa0623170 | 0.825048 | 5.796508e-54 | -8.615850e-47 |
| Msa0455260 | Msa0623170 | 0.808092 | 3.670840e-50 | -8.615850e-47 |
| Msa0458790 | Msa0623170 | 0.806424 | 8.280467e-50 | -8.615850e-47 |
| Msa0466100 | Msa0623170 | 0.825770 | 3.910276e-54 | -8.615850e-47 |
| Msa0467920 | Msa0623170 | -0.845606 | 3.656708e-59 | -8.615850e-47 |
| Msa0253370 | Msa0623170 | 0.845497 | 3.913643e-59 | -8.615850e-47 |
| Msa0260970 | Msa0623170 | 0.812578 | 3.951477e-51 | -8.615850e-47 |
| Msa0264940 | Msa0623170 | -0.812535 | 4.038354e-51 | -8.615850e-47 |
| Msa0277280 | Msa0623170 | -0.832329 | 1.005863e-55 | -8.615850e-47 |
| Msa0282590 | Msa0623170 | 0.805768 | 1.137997e-49 | -8.615850e-47 |
| Msa0288320 | Msa0623170 | 0.804827 | 1.792010e-49 | -8.615850e-47 |
| Msa0290950 | Msa0623170 | 0.832017 | 1.201210e-55 | -8.615850e-47 |
| Msa0290970 | Msa0623170 | 0.829604 | 4.691597e-55 | -8.615850e-47 |
| Msa0292180 | Msa0623170 | 0.840329 | 9.284698e-58 | -8.615850e-47 |
| Msa0302990 | Msa0623170 | -0.815752 | 7.868605e-52 | -8.615850e-47 |
| Msa0304990 | Msa0623170 | 0.852726 | 3.821246e-61 | -8.615850e-47 |
| Msa0306130 | Msa0623170 | 0.812328 | 4.480306e-51 | -8.615850e-47 |
| Msa0330400 | Msa0623170 | 0.840819 | 6.909947e-58 | -8.615850e-47 |
| Msa0351230 | Msa0623170 | 0.808216 | 3.453975e-50 | -8.615850e-47 |
| Msa0490480 | Msa0623170 | 0.813242 | 2.826234e-51 | -8.615850e-47 |
| Msa0502500 | Msa0623170 | 0.836482 | 9.118345e-57 | -8.615850e-47 |
| Msa0505390 | Msa0623170 | 0.812472 | 4.167525e-51 | -8.615850e-47 |
| Msa0511890 | Msa0623170 | 0.805590 | 1.240637e-49 | -8.615850e-47 |
| Msa0514330 | Msa0623170 | -0.821707 | 3.498537e-53 | -8.615850e-47 |
| Msa0531990 | Msa0623170 | -0.805021 | 1.632341e-49 | -8.615850e-47 |
| Msa0532100 | Msa0623170 | -0.804115 | 2.522460e-49 | -8.615850e-47 |
| Msa0565490 | Msa0623170 | 0.809589 | 1.755847e-50 | -8.615850e-47 |
| Msa0575250 | Msa0623170 | 0.815283 | 1.000888e-51 | -8.615850e-47 |
| Msa0581340 | Msa0623170 | 0.824536 | 7.655093e-54 | -8.615850e-47 |
| Msa0583590 | Msa0623170 | 0.805894 | 1.070938e-49 | -8.615850e-47 |
| Msa0599250 | Msa0623170 | 0.804954 | 1.685680e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623170 | MtrunA17_Chr1g0212951 | 98.595 | 427 | 6 | 0 | 1 | 427 | 58 | 484 | 0.0 | 874 |
| Msa0623170 | MtrunA17_Chr4g0030591 | 56.341 | 410 | 171 | 1 | 2 | 411 | 58 | 459 | 3.13e-176 | 501 |
| Msa0623170 | MtrunA17_Chr4g0030581 | 57.561 | 410 | 165 | 1 | 2 | 411 | 58 | 458 | 1.11e-174 | 496 |
| Msa0623170 | MtrunA17_Chr4g0030601 | 56.341 | 410 | 162 | 2 | 2 | 411 | 58 | 450 | 1.34e-174 | 496 |
| Msa0623170 | MtrunA17_Chr2g0327721 | 55.396 | 417 | 164 | 4 | 3 | 411 | 59 | 461 | 6.60e-167 | 477 |
| Msa0623170 | MtrunA17_Chr7g0276251 | 42.640 | 394 | 200 | 4 | 6 | 394 | 153 | 525 | 4.38e-111 | 337 |
| Msa0623170 | MtrunA17_Chr4g0035081 | 42.025 | 395 | 201 | 4 | 9 | 399 | 134 | 504 | 1.48e-107 | 327 |
| Msa0623170 | MtrunA17_Chr5g0423521 | 42.188 | 384 | 198 | 4 | 13 | 394 | 126 | 487 | 8.03e-106 | 322 |
| Msa0623170 | MtrunA17_Chr1g0209881 | 41.667 | 384 | 200 | 5 | 13 | 394 | 126 | 487 | 1.65e-105 | 321 |
| Msa0623170 | MtrunA17_Chr1g0188051 | 41.388 | 389 | 203 | 4 | 9 | 394 | 137 | 503 | 4.34e-104 | 318 |
| Msa0623170 | MtrunA17_Chr2g0306781 | 41.860 | 387 | 200 | 4 | 13 | 396 | 34 | 398 | 1.59e-103 | 313 |
| Msa0623170 | MtrunA17_Chr1g0166191 | 40.360 | 389 | 207 | 5 | 9 | 394 | 143 | 509 | 9.40e-101 | 310 |
| Msa0623170 | MtrunA17_Chr3g0136561 | 40.415 | 386 | 213 | 4 | 13 | 394 | 528 | 900 | 1.41e-100 | 319 |
| Msa0623170 | MtrunA17_Chr4g0063011 | 40.153 | 391 | 209 | 4 | 9 | 396 | 125 | 493 | 4.22e-100 | 307 |
| Msa0623170 | MtrunA17_Chr2g0277841 | 38.677 | 393 | 216 | 4 | 5 | 394 | 78 | 448 | 8.95e-96 | 295 |
| Msa0623170 | MtrunA17_Chr6g0480561 | 37.722 | 395 | 216 | 6 | 9 | 397 | 98 | 468 | 5.46e-94 | 291 |
| Msa0623170 | MtrunA17_Chr2g0295781 | 37.028 | 397 | 218 | 6 | 9 | 398 | 81 | 452 | 1.80e-92 | 286 |
| Msa0623170 | MtrunA17_Chr1g0204301 | 38.303 | 389 | 216 | 4 | 9 | 394 | 116 | 483 | 5.17e-84 | 265 |
| Msa0623170 | MtrunA17_Chr3g0115021 | 38.035 | 397 | 214 | 7 | 9 | 399 | 117 | 487 | 3.12e-83 | 263 |
| Msa0623170 | MtrunA17_Chr3g0115041 | 38.035 | 397 | 214 | 7 | 9 | 399 | 117 | 487 | 3.47e-83 | 263 |
| Msa0623170 | MtrunA17_Chr7g0276241 | 40.909 | 308 | 151 | 3 | 92 | 394 | 2 | 283 | 1.36e-82 | 255 |
| Msa0623170 | MtrunA17_Chr7g0250661 | 40.584 | 308 | 159 | 3 | 92 | 396 | 2 | 288 | 4.86e-81 | 251 |
| Msa0623170 | MtrunA17_Chr6g0469631 | 38.539 | 397 | 212 | 7 | 9 | 399 | 116 | 486 | 1.57e-79 | 254 |
| Msa0623170 | MtrunA17_Chr2g0282281 | 35.356 | 379 | 220 | 3 | 2 | 380 | 139 | 492 | 1.29e-78 | 252 |
| Msa0623170 | MtrunA17_Chr6g0461631 | 37.132 | 272 | 147 | 4 | 126 | 394 | 3 | 253 | 1.55e-58 | 192 |
| Msa0623170 | MtrunA17_Chr4g0026871 | 37.349 | 249 | 127 | 5 | 154 | 396 | 1 | 226 | 6.97e-53 | 176 |
| Msa0623170 | MtrunA17_Chr4g0026791 | 36.634 | 202 | 102 | 4 | 154 | 352 | 1 | 179 | 1.50e-37 | 134 |
| Msa0623170 | MtrunA17_Chr4g0026721 | 35.000 | 180 | 89 | 4 | 223 | 397 | 3 | 159 | 7.25e-32 | 119 |
| Msa0623170 | MtrunA17_Chr6g0461621 | 39.231 | 130 | 75 | 2 | 2 | 128 | 91 | 219 | 9.95e-23 | 96.3 |
| Msa0623170 | MtrunA17_Chr4g0026861 | 34.677 | 124 | 80 | 1 | 5 | 128 | 92 | 214 | 1.53e-21 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623170 | AT5G04530.1 | 62.796 | 422 | 137 | 4 | 2 | 420 | 60 | 464 | 0.0 | 563 |
| Msa0623170 | AT2G28630.2 | 56.145 | 415 | 170 | 3 | 2 | 412 | 58 | 464 | 1.20e-170 | 487 |
| Msa0623170 | AT2G28630.1 | 56.145 | 415 | 170 | 3 | 2 | 412 | 58 | 464 | 1.20e-170 | 487 |
| Msa0623170 | AT1G07720.1 | 55.238 | 420 | 169 | 4 | 1 | 412 | 57 | 465 | 8.87e-165 | 472 |
| Msa0623170 | AT1G07720.2 | 55.238 | 420 | 169 | 4 | 1 | 412 | 100 | 508 | 1.40e-164 | 473 |
| Msa0623170 | AT2G15090.1 | 41.860 | 387 | 195 | 5 | 13 | 394 | 115 | 476 | 3.31e-107 | 325 |
| Msa0623170 | AT1G01120.1 | 42.105 | 380 | 190 | 5 | 21 | 394 | 168 | 523 | 5.98e-107 | 326 |
| Msa0623170 | AT1G19440.1 | 40.874 | 389 | 200 | 6 | 11 | 394 | 148 | 511 | 3.04e-106 | 324 |
| Msa0623170 | AT2G46720.1 | 39.386 | 391 | 210 | 4 | 9 | 394 | 94 | 462 | 3.35e-106 | 322 |
| Msa0623170 | AT4G34510.1 | 41.602 | 387 | 203 | 4 | 10 | 394 | 117 | 482 | 4.44e-106 | 323 |
| Msa0623170 | AT4G34250.1 | 42.377 | 387 | 193 | 6 | 13 | 394 | 123 | 484 | 4.85e-105 | 320 |
| Msa0623170 | AT2G16280.1 | 41.192 | 386 | 203 | 4 | 11 | 394 | 144 | 507 | 3.08e-104 | 318 |
| Msa0623170 | AT1G25450.1 | 40.885 | 384 | 203 | 5 | 13 | 394 | 122 | 483 | 3.53e-103 | 315 |
| Msa0623170 | AT1G68530.1 | 40.365 | 384 | 205 | 5 | 13 | 394 | 127 | 488 | 6.45e-102 | 312 |
| Msa0623170 | AT4G34520.1 | 40.827 | 387 | 200 | 5 | 13 | 394 | 125 | 487 | 7.67e-102 | 312 |
| Msa0623170 | AT2G26250.1 | 39.340 | 394 | 230 | 4 | 9 | 394 | 155 | 547 | 2.05e-101 | 313 |
| Msa0623170 | AT1G04220.1 | 40.247 | 405 | 209 | 8 | 2 | 394 | 129 | 512 | 1.88e-100 | 309 |
| Msa0623170 | AT3G10280.1 | 38.107 | 391 | 208 | 5 | 9 | 394 | 94 | 455 | 3.10e-99 | 304 |
| Msa0623170 | AT2G26640.1 | 40.360 | 389 | 207 | 4 | 9 | 394 | 134 | 500 | 6.21e-99 | 305 |
| Msa0623170 | AT5G43760.1 | 39.851 | 404 | 211 | 6 | 2 | 394 | 135 | 517 | 1.07e-98 | 305 |
| Msa0623170 | AT1G71160.1 | 39.175 | 388 | 211 | 5 | 9 | 394 | 81 | 445 | 1.25e-95 | 295 |
| Msa0623170 | AT5G49070.1 | 37.811 | 402 | 219 | 5 | 6 | 399 | 82 | 460 | 2.86e-91 | 284 |
| Msa0623170 | AT3G52160.2 | 30.846 | 402 | 212 | 5 | 1 | 402 | 1 | 336 | 1.64e-67 | 218 |
| Msa0623170 | AT3G52160.1 | 31.579 | 380 | 207 | 4 | 1 | 380 | 114 | 440 | 3.48e-66 | 218 |
| Msa0623170 | AT1G68530.2 | 38.645 | 251 | 152 | 2 | 13 | 263 | 127 | 375 | 2.39e-59 | 198 |
| Msa0623170 | AT5G49070.2 | 37.021 | 235 | 141 | 2 | 6 | 237 | 82 | 312 | 4.48e-44 | 156 |
Find 69 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCAAAGATTCTCCCATTT+TGG | 0.117044 | 4_3:-363836 | Msa0623170:CDS |
| CCTCCCAACATATTAAATTT+AGG | 0.181690 | 4_3:+363708 | None:intergenic |
| CTTCCTTCAAGAACGTTTCT+TGG | 0.199155 | 4_3:+364455 | None:intergenic |
| TCCCAAAATGGGAGAATCTT+TGG | 0.263372 | 4_3:+363834 | None:intergenic |
| GACAGTAAATTTACAGTCTA+TGG | 0.278528 | 4_3:-363859 | Msa0623170:CDS |
| AAAGGATTATTGAGTGTATC+TGG | 0.291860 | 4_3:+363360 | None:intergenic |
| ATACTTCTGCTGGTGGATTA+TGG | 0.292782 | 4_3:-363545 | Msa0623170:CDS |
| AGCAGATTTAACAAGACTTT+TGG | 0.328960 | 4_3:+363893 | None:intergenic |
| AACCTGACCAGTTCCCAAAA+TGG | 0.338184 | 4_3:+363822 | None:intergenic |
| TTAAGTGTAATAATTGTGTT+TGG | 0.339072 | 4_3:-363443 | Msa0623170:CDS |
| GGTGGTAGGGCAGTTATTGA+TGG | 0.340936 | 4_3:-363639 | Msa0623170:CDS |
| GTCTTCAATCTTGCAGGAAT+GGG | 0.346369 | 4_3:-364233 | Msa0623170:CDS |
| AGTTATTGATGGGGTTGGTA+AGG | 0.349662 | 4_3:-363628 | Msa0623170:CDS |
| GTAAAAGTCTTCAATCTTGC+AGG | 0.353247 | 4_3:-364239 | Msa0623170:CDS |
| CTTAAAACCATGGTTAGTTC+AGG | 0.363565 | 4_3:-364500 | Msa0623170:CDS |
| ATTTGTCTGATACTAATGTT+TGG | 0.369574 | 4_3:-363407 | Msa0623170:CDS |
| AAACCTAAATTTAATATGTT+GGG | 0.383049 | 4_3:-363711 | Msa0623170:CDS |
| CCCAAAATGGGAGAATCTTT+GGG | 0.386365 | 4_3:+363835 | None:intergenic |
| AAAACCTAAATTTAATATGT+TGG | 0.386628 | 4_3:-363712 | Msa0623170:CDS |
| TAGGATGGCACTTCATCGTT+GGG | 0.405904 | 4_3:-363571 | Msa0623170:CDS |
| TTGATGATTAGTCTTGGAGC+TGG | 0.423250 | 4_3:-363468 | Msa0623170:CDS |
| AAAACATATGAAAATTCCCT+TGG | 0.437613 | 4_3:-364164 | Msa0623170:CDS |
| CAGAAGATCTTGGCTCTCAT+TGG | 0.438630 | 4_3:-364127 | Msa0623170:CDS |
| GTTATTGATGGGGTTGGTAA+GGG | 0.442438 | 4_3:-363627 | Msa0623170:CDS |
| ACCTGACCAGTTCCCAAAAT+GGG | 0.447146 | 4_3:+363823 | None:intergenic |
| GTGGTAGGGCAGTTATTGAT+GGG | 0.447295 | 4_3:-363638 | Msa0623170:CDS |
| ATATCTTAGCTTTGTGAGGT+TGG | 0.447838 | 4_3:-363307 | Msa0623170:CDS |
| TTGTGTTTGGGAAGTTATGA+AGG | 0.449292 | 4_3:-363430 | Msa0623170:CDS |
| TGTCCAAGAAACGTTCTTGA+AGG | 0.449388 | 4_3:-364458 | Msa0623170:CDS |
| TTTGTGTTCATCCTGGTGGT+AGG | 0.458457 | 4_3:-363653 | Msa0623170:CDS |
| TCATATGTGTCTTTAAGAGT+TGG | 0.461513 | 4_3:+364422 | None:intergenic |
| AGAGGCTTAAGAAAGGTGAT+AGG | 0.463294 | 4_3:-363494 | Msa0623170:CDS |
| CATGTGTTTCAGTTTCAAGA+TGG | 0.463864 | 4_3:+364004 | None:intergenic |
| TAAATTTAATATGTTGGGAG+GGG | 0.470603 | 4_3:-363706 | Msa0623170:CDS |
| TAAGTGTAATAATTGTGTTT+GGG | 0.472156 | 4_3:-363442 | Msa0623170:CDS |
| CGATGAAGTGCCATCCTAGC+TGG | 0.483902 | 4_3:+363576 | None:intergenic |
| AGTCTTCAATCTTGCAGGAA+TGG | 0.484453 | 4_3:-364234 | Msa0623170:CDS |
| CACATGGAAAGAACACAGTA+TGG | 0.488505 | 4_3:-363987 | Msa0623170:CDS |
| TTGTGTTCATCCTGGTGGTA+GGG | 0.491562 | 4_3:-363652 | Msa0623170:CDS |
| CTAGGATGGCACTTCATCGT+TGG | 0.495311 | 4_3:-363572 | Msa0623170:CDS |
| CGTTGGGGTAATACTTCTGC+TGG | 0.498272 | 4_3:-363555 | Msa0623170:CDS |
| TGATGATTAGTCTTGGAGCT+GGG | 0.508912 | 4_3:-363467 | Msa0623170:CDS |
| ACCATGGTTAGTTCAGGAAT+CGG | 0.511336 | 4_3:-364494 | Msa0623170:CDS |
| TGATCTTGAGCCAGCTAGGA+TGG | 0.522671 | 4_3:-363586 | Msa0623170:CDS |
| GTTGTGAGCACAGAAGATCT+TGG | 0.526835 | 4_3:-364137 | Msa0623170:CDS |
| AAATTTAATATGTTGGGAGG+GGG | 0.527603 | 4_3:-363705 | Msa0623170:CDS |
| CCTAAATTTAATATGTTGGG+AGG | 0.527989 | 4_3:-363708 | Msa0623170:CDS |
| CTAAATTTAATATGTTGGGA+GGG | 0.529020 | 4_3:-363707 | Msa0623170:CDS |
| ATTATTCTTGCTGTGAGTGA+AGG | 0.536137 | 4_3:+364287 | None:intergenic |
| AATATGATCTTGAGCCAGCT+AGG | 0.540062 | 4_3:-363590 | Msa0623170:CDS |
| CTGTGCTCACAACAATTCCA+AGG | 0.544367 | 4_3:+364147 | None:intergenic |
| TTACAATTGTTGCATACAAG+TGG | 0.555295 | 4_3:-363949 | Msa0623170:CDS |
| AGGGCAGTTATTGATGGGGT+TGG | 0.556135 | 4_3:-363633 | Msa0623170:CDS |
| ATACAAGTGGAAGATGAAGA+AGG | 0.560414 | 4_3:-363936 | Msa0623170:CDS |
| TAGATTCCTCCTTAAAACCA+TGG | 0.562273 | 4_3:-364510 | Msa0623170:CDS |
| TGGGGTAATACTTCTGCTGG+TGG | 0.565909 | 4_3:-363552 | Msa0623170:CDS |
| TCAATAACTGCCCTACCACC+AGG | 0.573692 | 4_3:+363642 | None:intergenic |
| ACAAGAATGTCTATTTCTGA+AGG | 0.580320 | 4_3:+364338 | None:intergenic |
| CTTGCTGTGAGTGAAGGTGC+TGG | 0.586342 | 4_3:+364293 | None:intergenic |
| ATCTAAATTCCTCAAGACCT+AGG | 0.588769 | 4_3:+364528 | None:intergenic |
| ACCGATTCCTGAACTAACCA+TGG | 0.589832 | 4_3:+364493 | None:intergenic |
| ATGAATATCTTAGCTTTGTG+AGG | 0.604029 | 4_3:-363311 | Msa0623170:CDS |
| CTTGGCTCTCATTGGTACTG+TGG | 0.621208 | 4_3:-364119 | Msa0623170:CDS |
| TCTTCAATCTTGCAGGAATG+GGG | 0.635113 | 4_3:-364232 | Msa0623170:CDS |
| CATCTTGAAACTGAAACACA+TGG | 0.639110 | 4_3:-364003 | Msa0623170:CDS |
| TGGTAGGGCAGTTATTGATG+GGG | 0.644981 | 4_3:-363637 | Msa0623170:CDS |
| TGTGCTCACAACAATTCCAA+GGG | 0.652013 | 4_3:+364148 | None:intergenic |
| AGGATGGCACTTCATCGTTG+GGG | 0.671813 | 4_3:-363570 | Msa0623170:CDS |
| GGATTATTGAGTGTATCTGG+AGG | 0.693373 | 4_3:+363363 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACCTAAATTTAATATGT+TGG | - | chr4_3:364111-364130 | Msa0623170:CDS | 15.0% |
| !! | AAACCTAAATTTAATATGTT+GGG | - | chr4_3:364112-364131 | Msa0623170:CDS | 15.0% |
| !! | AAAACCTAAATTTAATATGT+TGG | - | chr4_3:364111-364130 | Msa0623170:CDS | 15.0% |
| !! | AAACCTAAATTTAATATGTT+GGG | - | chr4_3:364112-364131 | Msa0623170:CDS | 15.0% |
| !! | AGTATGAAAAAAGTTGAATT+TGG | - | chr4_3:364046-364065 | Msa0623170:CDS | 20.0% |
| !!! | TTTATTTTGTTTTTGAACCT+TGG | - | chr4_3:364076-364095 | Msa0623170:CDS | 20.0% |
| !! | TTAAGTGTAATAATTGTGTT+TGG | - | chr4_3:364380-364399 | Msa0623170:CDS | 20.0% |
| !! | TAAGTGTAATAATTGTGTTT+GGG | - | chr4_3:364381-364400 | Msa0623170:CDS | 20.0% |
| !!! | CAATTATACTTTTCCTTAAA+AGG | + | chr4_3:364484-364503 | None:intergenic | 20.0% |
| !!! | CTTTTAAGGAAAAGTATAAT+TGG | - | chr4_3:364482-364501 | Msa0623170:CDS | 20.0% |
| !! | AGTATGAAAAAAGTTGAATT+TGG | - | chr4_3:364046-364065 | Msa0623170:CDS | 20.0% |
| !!! | TTTATTTTGTTTTTGAACCT+TGG | - | chr4_3:364076-364095 | Msa0623170:CDS | 20.0% |
| !! | TTAAGTGTAATAATTGTGTT+TGG | - | chr4_3:364380-364399 | Msa0623170:CDS | 20.0% |
| !! | TAAGTGTAATAATTGTGTTT+GGG | - | chr4_3:364381-364400 | Msa0623170:CDS | 20.0% |
| !!! | CAATTATACTTTTCCTTAAA+AGG | + | chr4_3:364484-364503 | None:intergenic | 20.0% |
| !!! | CTTTTAAGGAAAAGTATAAT+TGG | - | chr4_3:364482-364501 | Msa0623170:CDS | 20.0% |
| !!! | AGAAACATGTTTTTTTGAAG+AGG | + | chr4_3:363463-363482 | None:intergenic | 25.0% |
| ! | AAAACATATGAAAATTCCCT+TGG | - | chr4_3:363659-363678 | Msa0623170:CDS | 25.0% |
| !! | GTTTTATAACCATTTTACCA+AGG | + | chr4_3:364096-364115 | None:intergenic | 25.0% |
| ! | CTAAATTTAATATGTTGGGA+GGG | - | chr4_3:364116-364135 | Msa0623170:CDS | 25.0% |
| ! | TAAATTTAATATGTTGGGAG+GGG | - | chr4_3:364117-364136 | Msa0623170:CDS | 25.0% |
| !!! | ATGGTATGTTTTAGGTTATA+TGG | - | chr4_3:364297-364316 | Msa0623170:CDS | 25.0% |
| ! | ATTTGTCTGATACTAATGTT+TGG | - | chr4_3:364416-364435 | Msa0623170:CDS | 25.0% |
| !! | TACACTCAATAATCCTTTTA+AGG | - | chr4_3:364468-364487 | Msa0623170:CDS | 25.0% |
| !!! | AGAAACATGTTTTTTTGAAG+AGG | + | chr4_3:363463-363482 | None:intergenic | 25.0% |
| ! | AAAACATATGAAAATTCCCT+TGG | - | chr4_3:363659-363678 | Msa0623170:CDS | 25.0% |
| !! | GTTTTATAACCATTTTACCA+AGG | + | chr4_3:364096-364115 | None:intergenic | 25.0% |
| ! | CTAAATTTAATATGTTGGGA+GGG | - | chr4_3:364116-364135 | Msa0623170:CDS | 25.0% |
| ! | TAAATTTAATATGTTGGGAG+GGG | - | chr4_3:364117-364136 | Msa0623170:CDS | 25.0% |
| !!! | ATGGTATGTTTTAGGTTATA+TGG | - | chr4_3:364297-364316 | Msa0623170:CDS | 25.0% |
| ! | ATTTGTCTGATACTAATGTT+TGG | - | chr4_3:364416-364435 | Msa0623170:CDS | 25.0% |
| !! | TACACTCAATAATCCTTTTA+AGG | - | chr4_3:364468-364487 | Msa0623170:CDS | 25.0% |
| ! | TCATATGTGTCTTTAAGAGT+TGG | + | chr4_3:363404-363423 | None:intergenic | 30.0% |
| !! | ACAAGAATGTCTATTTCTGA+AGG | + | chr4_3:363488-363507 | None:intergenic | 30.0% |
| !!! | TGTTTTGTTTGTGAAAAGCA+TGG | + | chr4_3:363783-363802 | None:intergenic | 30.0% |
| TTACAATTGTTGCATACAAG+TGG | - | chr4_3:363874-363893 | Msa0623170:CDS | 30.0% | |
| ! | AGCAGATTTAACAAGACTTT+TGG | + | chr4_3:363933-363952 | None:intergenic | 30.0% |
| GACAGTAAATTTACAGTCTA+TGG | - | chr4_3:363964-363983 | Msa0623170:CDS | 30.0% | |
| ! | GTTTTTGAACCTTGGTAAAA+TGG | - | chr4_3:364084-364103 | Msa0623170:CDS | 30.0% |
| CCTCCCAACATATTAAATTT+AGG | + | chr4_3:364118-364137 | None:intergenic | 30.0% | |
| CCTAAATTTAATATGTTGGG+AGG | - | chr4_3:364115-364134 | Msa0623170:CDS | 30.0% | |
| AAATTTAATATGTTGGGAGG+GGG | - | chr4_3:364118-364137 | Msa0623170:CDS | 30.0% | |
| GTTATATGGAAGCAAAAAAG+AGG | - | chr4_3:364311-364330 | Msa0623170:CDS | 30.0% | |
| !!! | AGGATTTTGATGATTAGTCT+TGG | - | chr4_3:364349-364368 | Msa0623170:CDS | 30.0% |
| AAAGGATTATTGAGTGTATC+TGG | + | chr4_3:364466-364485 | None:intergenic | 30.0% | |
| !! | ATGAATATCTTAGCTTTGTG+AGG | - | chr4_3:364512-364531 | Msa0623170:CDS | 30.0% |
| ! | TCATATGTGTCTTTAAGAGT+TGG | + | chr4_3:363404-363423 | None:intergenic | 30.0% |
| !! | ACAAGAATGTCTATTTCTGA+AGG | + | chr4_3:363488-363507 | None:intergenic | 30.0% |
| !!! | TGTTTTGTTTGTGAAAAGCA+TGG | + | chr4_3:363783-363802 | None:intergenic | 30.0% |
| TTACAATTGTTGCATACAAG+TGG | - | chr4_3:363874-363893 | Msa0623170:CDS | 30.0% | |
| ! | AGCAGATTTAACAAGACTTT+TGG | + | chr4_3:363933-363952 | None:intergenic | 30.0% |
| GACAGTAAATTTACAGTCTA+TGG | - | chr4_3:363964-363983 | Msa0623170:CDS | 30.0% | |
| ! | GTTTTTGAACCTTGGTAAAA+TGG | - | chr4_3:364084-364103 | Msa0623170:CDS | 30.0% |
| CCTCCCAACATATTAAATTT+AGG | + | chr4_3:364118-364137 | None:intergenic | 30.0% | |
| CCTAAATTTAATATGTTGGG+AGG | - | chr4_3:364115-364134 | Msa0623170:CDS | 30.0% | |
| AAATTTAATATGTTGGGAGG+GGG | - | chr4_3:364118-364137 | Msa0623170:CDS | 30.0% | |
| GTTATATGGAAGCAAAAAAG+AGG | - | chr4_3:364311-364330 | Msa0623170:CDS | 30.0% | |
| !!! | AGGATTTTGATGATTAGTCT+TGG | - | chr4_3:364349-364368 | Msa0623170:CDS | 30.0% |
| AAAGGATTATTGAGTGTATC+TGG | + | chr4_3:364466-364485 | None:intergenic | 30.0% | |
| !! | ATGAATATCTTAGCTTTGTG+AGG | - | chr4_3:364512-364531 | Msa0623170:CDS | 30.0% |
| AAACAAAAACCTAGGTCTTG+AGG | - | chr4_3:363286-363305 | Msa0623170:CDS | 35.0% | |
| ATCTAAATTCCTCAAGACCT+AGG | + | chr4_3:363298-363317 | None:intergenic | 35.0% | |
| TAGATTCCTCCTTAAAACCA+TGG | - | chr4_3:363313-363332 | Msa0623170:CDS | 35.0% | |
| !!! | AACTAACCATGGTTTTAAGG+AGG | + | chr4_3:363322-363341 | None:intergenic | 35.0% |
| !! | CTGAACTAACCATGGTTTTA+AGG | + | chr4_3:363325-363344 | None:intergenic | 35.0% |
| ! | CTTAAAACCATGGTTAGTTC+AGG | - | chr4_3:363323-363342 | Msa0623170:CDS | 35.0% |
| ! | ATTATTCTTGCTGTGAGTGA+AGG | + | chr4_3:363539-363558 | None:intergenic | 35.0% |
| GTAAAAGTCTTCAATCTTGC+AGG | - | chr4_3:363584-363603 | Msa0623170:CDS | 35.0% | |
| CATGTGTTTCAGTTTCAAGA+TGG | + | chr4_3:363822-363841 | None:intergenic | 35.0% | |
| CATCTTGAAACTGAAACACA+TGG | - | chr4_3:363820-363839 | Msa0623170:CDS | 35.0% | |
| ATACAAGTGGAAGATGAAGA+AGG | - | chr4_3:363887-363906 | Msa0623170:CDS | 35.0% | |
| ! | GAACATTTTTGTGTTCATCC+TGG | - | chr4_3:364163-364182 | Msa0623170:CDS | 35.0% |
| !!! | GGTGGATTATGGTATGTTTT+AGG | - | chr4_3:364289-364308 | Msa0623170:CDS | 35.0% |
| GCAAAAAAGAGGCTTAAGAA+AGG | - | chr4_3:364322-364341 | Msa0623170:CDS | 35.0% | |
| TTGTGTTTGGGAAGTTATGA+AGG | - | chr4_3:364393-364412 | Msa0623170:CDS | 35.0% | |
| !! | ATATCTTAGCTTTGTGAGGT+TGG | - | chr4_3:364516-364535 | Msa0623170:CDS | 35.0% |
| !! | GAGGTTGGATTTTAGTACTA+TGG | - | chr4_3:364531-364550 | Msa0623170:CDS | 35.0% |
| AAACAAAAACCTAGGTCTTG+AGG | - | chr4_3:363286-363305 | Msa0623170:CDS | 35.0% | |
| ATCTAAATTCCTCAAGACCT+AGG | + | chr4_3:363298-363317 | None:intergenic | 35.0% | |
| TAGATTCCTCCTTAAAACCA+TGG | - | chr4_3:363313-363332 | Msa0623170:CDS | 35.0% | |
| !!! | AACTAACCATGGTTTTAAGG+AGG | + | chr4_3:363322-363341 | None:intergenic | 35.0% |
| !! | CTGAACTAACCATGGTTTTA+AGG | + | chr4_3:363325-363344 | None:intergenic | 35.0% |
| ! | CTTAAAACCATGGTTAGTTC+AGG | - | chr4_3:363323-363342 | Msa0623170:CDS | 35.0% |
| ! | ATTATTCTTGCTGTGAGTGA+AGG | + | chr4_3:363539-363558 | None:intergenic | 35.0% |
| GTAAAAGTCTTCAATCTTGC+AGG | - | chr4_3:363584-363603 | Msa0623170:CDS | 35.0% | |
| CATGTGTTTCAGTTTCAAGA+TGG | + | chr4_3:363822-363841 | None:intergenic | 35.0% | |
| CATCTTGAAACTGAAACACA+TGG | - | chr4_3:363820-363839 | Msa0623170:CDS | 35.0% | |
| ATACAAGTGGAAGATGAAGA+AGG | - | chr4_3:363887-363906 | Msa0623170:CDS | 35.0% | |
| ! | GAACATTTTTGTGTTCATCC+TGG | - | chr4_3:364163-364182 | Msa0623170:CDS | 35.0% |
| !!! | GGTGGATTATGGTATGTTTT+AGG | - | chr4_3:364289-364308 | Msa0623170:CDS | 35.0% |
| GCAAAAAAGAGGCTTAAGAA+AGG | - | chr4_3:364322-364341 | Msa0623170:CDS | 35.0% | |
| TTGTGTTTGGGAAGTTATGA+AGG | - | chr4_3:364393-364412 | Msa0623170:CDS | 35.0% | |
| !! | ATATCTTAGCTTTGTGAGGT+TGG | - | chr4_3:364516-364535 | Msa0623170:CDS | 35.0% |
| !! | GAGGTTGGATTTTAGTACTA+TGG | - | chr4_3:364531-364550 | Msa0623170:CDS | 35.0% |
| ! | ACCATGGTTAGTTCAGGAAT+CGG | - | chr4_3:363329-363348 | Msa0623170:CDS | 40.0% |
| TGTCCAAGAAACGTTCTTGA+AGG | - | chr4_3:363365-363384 | Msa0623170:CDS | 40.0% | |
| CTTCCTTCAAGAACGTTTCT+TGG | + | chr4_3:363371-363390 | None:intergenic | 40.0% | |
| AGTCTTCAATCTTGCAGGAA+TGG | - | chr4_3:363589-363608 | Msa0623170:CDS | 40.0% | |
| GTCTTCAATCTTGCAGGAAT+GGG | - | chr4_3:363590-363609 | Msa0623170:CDS | 40.0% | |
| TCTTCAATCTTGCAGGAATG+GGG | - | chr4_3:363591-363610 | Msa0623170:CDS | 40.0% | |
| TGTGCTCACAACAATTCCAA+GGG | + | chr4_3:363678-363697 | None:intergenic | 40.0% | |
| !!! | TCTAACTGTCTTTTTCGAGC+AGG | - | chr4_3:363749-363768 | Msa0623170:CDS | 40.0% |
| CACATGGAAAGAACACAGTA+TGG | - | chr4_3:363836-363855 | Msa0623170:CDS | 40.0% | |
| ! | GAAGATGAAGAAGGTTTTGC+AGG | - | chr4_3:363896-363915 | Msa0623170:CDS | 40.0% |
| ! | TCCCAAAGATTCTCCCATTT+TGG | - | chr4_3:363987-364006 | Msa0623170:CDS | 40.0% |
| CCCAAAATGGGAGAATCTTT+GGG | + | chr4_3:363991-364010 | None:intergenic | 40.0% | |
| ! | CCCAAAGATTCTCCCATTTT+GGG | - | chr4_3:363988-364007 | Msa0623170:CDS | 40.0% |
| TCCCAAAATGGGAGAATCTT+TGG | + | chr4_3:363992-364011 | None:intergenic | 40.0% | |
| GGGGGTTTGAATTTGAAAAG+TGG | - | chr4_3:364136-364155 | Msa0623170:CDS | 40.0% | |
| ! | CATTTTTGTGTTCATCCTGG+TGG | - | chr4_3:364166-364185 | Msa0623170:CDS | 40.0% |
| !! | AGTTATTGATGGGGTTGGTA+AGG | - | chr4_3:364195-364214 | Msa0623170:CDS | 40.0% |
| !! | GTTATTGATGGGGTTGGTAA+GGG | - | chr4_3:364196-364215 | Msa0623170:CDS | 40.0% |
| AATATGATCTTGAGCCAGCT+AGG | - | chr4_3:364233-364252 | Msa0623170:CDS | 40.0% | |
| !! | ATACTTCTGCTGGTGGATTA+TGG | - | chr4_3:364278-364297 | Msa0623170:CDS | 40.0% |
| AGAGGCTTAAGAAAGGTGAT+AGG | - | chr4_3:364329-364348 | Msa0623170:CDS | 40.0% | |
| !! | TTGATGATTAGTCTTGGAGC+TGG | - | chr4_3:364355-364374 | Msa0623170:CDS | 40.0% |
| !! | TGATGATTAGTCTTGGAGCT+GGG | - | chr4_3:364356-364375 | Msa0623170:CDS | 40.0% |
| GGATTATTGAGTGTATCTGG+AGG | + | chr4_3:364463-364482 | None:intergenic | 40.0% | |
| ! | ACCATGGTTAGTTCAGGAAT+CGG | - | chr4_3:363329-363348 | Msa0623170:CDS | 40.0% |
| TGTCCAAGAAACGTTCTTGA+AGG | - | chr4_3:363365-363384 | Msa0623170:CDS | 40.0% | |
| CTTCCTTCAAGAACGTTTCT+TGG | + | chr4_3:363371-363390 | None:intergenic | 40.0% | |
| AGTCTTCAATCTTGCAGGAA+TGG | - | chr4_3:363589-363608 | Msa0623170:CDS | 40.0% | |
| GTCTTCAATCTTGCAGGAAT+GGG | - | chr4_3:363590-363609 | Msa0623170:CDS | 40.0% | |
| TCTTCAATCTTGCAGGAATG+GGG | - | chr4_3:363591-363610 | Msa0623170:CDS | 40.0% | |
| TGTGCTCACAACAATTCCAA+GGG | + | chr4_3:363678-363697 | None:intergenic | 40.0% | |
| !!! | TCTAACTGTCTTTTTCGAGC+AGG | - | chr4_3:363749-363768 | Msa0623170:CDS | 40.0% |
| CACATGGAAAGAACACAGTA+TGG | - | chr4_3:363836-363855 | Msa0623170:CDS | 40.0% | |
| ! | GAAGATGAAGAAGGTTTTGC+AGG | - | chr4_3:363896-363915 | Msa0623170:CDS | 40.0% |
| ! | TCCCAAAGATTCTCCCATTT+TGG | - | chr4_3:363987-364006 | Msa0623170:CDS | 40.0% |
| CCCAAAATGGGAGAATCTTT+GGG | + | chr4_3:363991-364010 | None:intergenic | 40.0% | |
| ! | CCCAAAGATTCTCCCATTTT+GGG | - | chr4_3:363988-364007 | Msa0623170:CDS | 40.0% |
| TCCCAAAATGGGAGAATCTT+TGG | + | chr4_3:363992-364011 | None:intergenic | 40.0% | |
| GGGGGTTTGAATTTGAAAAG+TGG | - | chr4_3:364136-364155 | Msa0623170:CDS | 40.0% | |
| ! | CATTTTTGTGTTCATCCTGG+TGG | - | chr4_3:364166-364185 | Msa0623170:CDS | 40.0% |
| !! | AGTTATTGATGGGGTTGGTA+AGG | - | chr4_3:364195-364214 | Msa0623170:CDS | 40.0% |
| !! | GTTATTGATGGGGTTGGTAA+GGG | - | chr4_3:364196-364215 | Msa0623170:CDS | 40.0% |
| AATATGATCTTGAGCCAGCT+AGG | - | chr4_3:364233-364252 | Msa0623170:CDS | 40.0% | |
| !! | ATACTTCTGCTGGTGGATTA+TGG | - | chr4_3:364278-364297 | Msa0623170:CDS | 40.0% |
| AGAGGCTTAAGAAAGGTGAT+AGG | - | chr4_3:364329-364348 | Msa0623170:CDS | 40.0% | |
| !! | TTGATGATTAGTCTTGGAGC+TGG | - | chr4_3:364355-364374 | Msa0623170:CDS | 40.0% |
| !! | TGATGATTAGTCTTGGAGCT+GGG | - | chr4_3:364356-364375 | Msa0623170:CDS | 40.0% |
| GGATTATTGAGTGTATCTGG+AGG | + | chr4_3:364463-364482 | None:intergenic | 40.0% | |
| ! | ACCGATTCCTGAACTAACCA+TGG | + | chr4_3:363333-363352 | None:intergenic | 45.0% |
| CTGTGCTCACAACAATTCCA+AGG | + | chr4_3:363679-363698 | None:intergenic | 45.0% | |
| GTTGTGAGCACAGAAGATCT+TGG | - | chr4_3:363686-363705 | Msa0623170:CDS | 45.0% | |
| ! | CAGAAGATCTTGGCTCTCAT+TGG | - | chr4_3:363696-363715 | Msa0623170:CDS | 45.0% |
| !!! | AACTGTCTTTTTCGAGCAGG+TGG | - | chr4_3:363752-363771 | Msa0623170:CDS | 45.0% |
| !! | GATTCTCCCATTTTGGGAAC+TGG | - | chr4_3:363994-364013 | Msa0623170:CDS | 45.0% |
| ACCTGACCAGTTCCCAAAAT+GGG | + | chr4_3:364003-364022 | None:intergenic | 45.0% | |
| AACCTGACCAGTTCCCAAAA+TGG | + | chr4_3:364004-364023 | None:intergenic | 45.0% | |
| TTTGTGTTCATCCTGGTGGT+AGG | - | chr4_3:364170-364189 | Msa0623170:CDS | 45.0% | |
| TTGTGTTCATCCTGGTGGTA+GGG | - | chr4_3:364171-364190 | Msa0623170:CDS | 45.0% | |
| GTGGTAGGGCAGTTATTGAT+GGG | - | chr4_3:364185-364204 | Msa0623170:CDS | 45.0% | |
| TGGTAGGGCAGTTATTGATG+GGG | - | chr4_3:364186-364205 | Msa0623170:CDS | 45.0% | |
| TAGGATGGCACTTCATCGTT+GGG | - | chr4_3:364252-364271 | Msa0623170:CDS | 45.0% | |
| ! | ACCGATTCCTGAACTAACCA+TGG | + | chr4_3:363333-363352 | None:intergenic | 45.0% |
| CTGTGCTCACAACAATTCCA+AGG | + | chr4_3:363679-363698 | None:intergenic | 45.0% | |
| GTTGTGAGCACAGAAGATCT+TGG | - | chr4_3:363686-363705 | Msa0623170:CDS | 45.0% | |
| ! | CAGAAGATCTTGGCTCTCAT+TGG | - | chr4_3:363696-363715 | Msa0623170:CDS | 45.0% |
| !!! | AACTGTCTTTTTCGAGCAGG+TGG | - | chr4_3:363752-363771 | Msa0623170:CDS | 45.0% |
| !! | GATTCTCCCATTTTGGGAAC+TGG | - | chr4_3:363994-364013 | Msa0623170:CDS | 45.0% |
| ACCTGACCAGTTCCCAAAAT+GGG | + | chr4_3:364003-364022 | None:intergenic | 45.0% | |
| AACCTGACCAGTTCCCAAAA+TGG | + | chr4_3:364004-364023 | None:intergenic | 45.0% | |
| TTTGTGTTCATCCTGGTGGT+AGG | - | chr4_3:364170-364189 | Msa0623170:CDS | 45.0% | |
| TTGTGTTCATCCTGGTGGTA+GGG | - | chr4_3:364171-364190 | Msa0623170:CDS | 45.0% | |
| GTGGTAGGGCAGTTATTGAT+GGG | - | chr4_3:364185-364204 | Msa0623170:CDS | 45.0% | |
| TGGTAGGGCAGTTATTGATG+GGG | - | chr4_3:364186-364205 | Msa0623170:CDS | 45.0% | |
| TAGGATGGCACTTCATCGTT+GGG | - | chr4_3:364252-364271 | Msa0623170:CDS | 45.0% | |
| ! | CTTGGCTCTCATTGGTACTG+TGG | - | chr4_3:363704-363723 | Msa0623170:CDS | 50.0% |
| !! | TCCCATTTTGGGAACTGGTC+AGG | - | chr4_3:363999-364018 | Msa0623170:CDS | 50.0% |
| TCAATAACTGCCCTACCACC+AGG | + | chr4_3:364184-364203 | None:intergenic | 50.0% | |
| GGTGGTAGGGCAGTTATTGA+TGG | - | chr4_3:364184-364203 | Msa0623170:CDS | 50.0% | |
| AGGGCAGTTATTGATGGGGT+TGG | - | chr4_3:364190-364209 | Msa0623170:CDS | 50.0% | |
| TGATCTTGAGCCAGCTAGGA+TGG | - | chr4_3:364237-364256 | Msa0623170:CDS | 50.0% | |
| CTAGGATGGCACTTCATCGT+TGG | - | chr4_3:364251-364270 | Msa0623170:CDS | 50.0% | |
| AGGATGGCACTTCATCGTTG+GGG | - | chr4_3:364253-364272 | Msa0623170:CDS | 50.0% | |
| CGTTGGGGTAATACTTCTGC+TGG | - | chr4_3:364268-364287 | Msa0623170:CDS | 50.0% | |
| TGGGGTAATACTTCTGCTGG+TGG | - | chr4_3:364271-364290 | Msa0623170:CDS | 50.0% | |
| ! | CTTGGCTCTCATTGGTACTG+TGG | - | chr4_3:363704-363723 | Msa0623170:CDS | 50.0% |
| !! | TCCCATTTTGGGAACTGGTC+AGG | - | chr4_3:363999-364018 | Msa0623170:CDS | 50.0% |
| TCAATAACTGCCCTACCACC+AGG | + | chr4_3:364184-364203 | None:intergenic | 50.0% | |
| GGTGGTAGGGCAGTTATTGA+TGG | - | chr4_3:364184-364203 | Msa0623170:CDS | 50.0% | |
| AGGGCAGTTATTGATGGGGT+TGG | - | chr4_3:364190-364209 | Msa0623170:CDS | 50.0% | |
| TGATCTTGAGCCAGCTAGGA+TGG | - | chr4_3:364237-364256 | Msa0623170:CDS | 50.0% | |
| CTAGGATGGCACTTCATCGT+TGG | - | chr4_3:364251-364270 | Msa0623170:CDS | 50.0% | |
| AGGATGGCACTTCATCGTTG+GGG | - | chr4_3:364253-364272 | Msa0623170:CDS | 50.0% | |
| CGTTGGGGTAATACTTCTGC+TGG | - | chr4_3:364268-364287 | Msa0623170:CDS | 50.0% | |
| TGGGGTAATACTTCTGCTGG+TGG | - | chr4_3:364271-364290 | Msa0623170:CDS | 50.0% | |
| ! | CTTGCTGTGAGTGAAGGTGC+TGG | + | chr4_3:363533-363552 | None:intergenic | 55.0% |
| ! | CGATGAAGTGCCATCCTAGC+TGG | + | chr4_3:364250-364269 | None:intergenic | 55.0% |
| ! | CTTGCTGTGAGTGAAGGTGC+TGG | + | chr4_3:363533-363552 | None:intergenic | 55.0% |
| ! | CGATGAAGTGCCATCCTAGC+TGG | + | chr4_3:364250-364269 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 363281 | 364564 | 363281 | ID=Msa0623170;Name=Msa0623170 |
| chr4_3 | mRNA | 363281 | 364564 | 363281 | ID=Msa0623170-mRNA-1;Parent=Msa0623170;Name=Msa0623170-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|427 |
| chr4_3 | exon | 363281 | 364564 | 363281 | ID=Msa0623170-mRNA-1:exon:70;Parent=Msa0623170-mRNA-1 |
| chr4_3 | CDS | 363281 | 364564 | 363281 | ID=Msa0623170-mRNA-1:cds;Parent=Msa0623170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
