Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0179000 | sp|Q8H991|HAZ1_ORYSJ | 41.240 | 645 | 295 | 15 | 166 | 735 | 37 | 672 | 3.75e-133 | 419 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0179000 | A0A072VRI3 | 97.415 | 851 | 22 | 0 | 1 | 851 | 1 | 851 | 0.0 | 1704 |
Gene ID | Type | Classification |
---|---|---|
Msa0179000 | TF | HB-PHD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002560 | Msa0179000 | 0.803471 | 3.432232e-49 | -8.615850e-47 |
Msa0003220 | Msa0179000 | 0.854259 | 1.386187e-61 | -8.615850e-47 |
Msa0003270 | Msa0179000 | 0.848007 | 8.060129e-60 | -8.615850e-47 |
Msa0010770 | Msa0179000 | 0.840410 | 8.840741e-58 | -8.615850e-47 |
Msa0027390 | Msa0179000 | 0.838650 | 2.535661e-57 | -8.615850e-47 |
Msa0032320 | Msa0179000 | 0.808549 | 2.933097e-50 | -8.615850e-47 |
Msa0032940 | Msa0179000 | 0.803394 | 3.560391e-49 | -8.615850e-47 |
Msa0037120 | Msa0179000 | 0.823204 | 1.571116e-53 | -8.615850e-47 |
Msa0045340 | Msa0179000 | 0.809153 | 2.177569e-50 | -8.615850e-47 |
Msa0054820 | Msa0179000 | 0.807340 | 5.303352e-50 | -8.615850e-47 |
Msa0055600 | Msa0179000 | 0.816843 | 4.485899e-52 | -8.615850e-47 |
Msa0055660 | Msa0179000 | 0.834157 | 3.524934e-56 | -8.615850e-47 |
Msa0084340 | Msa0179000 | 0.822005 | 2.985711e-53 | -8.615850e-47 |
Msa0092440 | Msa0179000 | 0.836773 | 7.687555e-57 | -8.615850e-47 |
Msa0096580 | Msa0179000 | 0.843947 | 1.024086e-58 | -8.615850e-47 |
Msa0097950 | Msa0179000 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
Msa0100160 | Msa0179000 | 0.801267 | 9.762254e-49 | -8.615850e-47 |
Msa0108870 | Msa0179000 | 0.807060 | 6.078189e-50 | -8.615850e-47 |
Msa0117910 | Msa0179000 | 0.807908 | 4.016290e-50 | -8.615850e-47 |
Msa0119320 | Msa0179000 | 0.803241 | 3.828758e-49 | -8.615850e-47 |
Msa0126230 | Msa0179000 | 0.816419 | 5.584966e-52 | -8.615850e-47 |
Msa0127040 | Msa0179000 | 0.816565 | 5.179111e-52 | -8.615850e-47 |
Msa0131290 | Msa0179000 | 0.815100 | 1.098809e-51 | -8.615850e-47 |
Msa0131700 | Msa0179000 | 0.806647 | 7.431884e-50 | -8.615850e-47 |
Msa0133820 | Msa0179000 | 0.803357 | 3.622902e-49 | -8.615850e-47 |
Msa0136380 | Msa0179000 | 0.864491 | 1.170229e-64 | -8.615850e-47 |
Msa0138210 | Msa0179000 | 0.841505 | 4.562805e-58 | -8.615850e-47 |
Msa0144780 | Msa0179000 | 0.820098 | 8.207420e-53 | -8.615850e-47 |
Msa0155330 | Msa0179000 | 0.802207 | 6.258492e-49 | -8.615850e-47 |
Msa0165300 | Msa0179000 | 0.840553 | 8.114433e-58 | -8.615850e-47 |
Msa0174360 | Msa0179000 | 0.801225 | 9.955334e-49 | -8.615850e-47 |
Msa0177170 | Msa0179000 | 0.841922 | 3.541949e-58 | -8.615850e-47 |
Msa0179000 | Msa0183420 | 0.832249 | 1.052756e-55 | -8.615850e-47 |
Msa0179000 | Msa0198520 | 0.801834 | 7.468131e-49 | -8.615850e-47 |
Msa0179000 | Msa0198530 | 0.803449 | 3.467267e-49 | -8.615850e-47 |
Msa0179000 | Msa0210260 | 0.806751 | 7.063524e-50 | -8.615850e-47 |
Msa0179000 | Msa0227230 | 0.846103 | 2.679608e-59 | -8.615850e-47 |
Msa0179000 | Msa0236770 | 0.815532 | 8.808095e-52 | -8.615850e-47 |
Msa0179000 | Msa0239940 | 0.833851 | 4.205072e-56 | -8.615850e-47 |
Msa0179000 | Msa0250670 | 0.808576 | 2.893411e-50 | -8.615850e-47 |
Msa0179000 | Msa0259270 | 0.803459 | 3.451258e-49 | -8.615850e-47 |
Msa0179000 | Msa0267870 | 0.842686 | 2.221816e-58 | -8.615850e-47 |
Msa0179000 | Msa0269520 | 0.839938 | 1.174302e-57 | -8.615850e-47 |
Msa0179000 | Msa0279390 | 0.827413 | 1.586334e-54 | -8.615850e-47 |
Msa0179000 | Msa0289400 | 0.831006 | 2.131524e-55 | -8.615850e-47 |
Msa0179000 | Msa0301810 | 0.828385 | 9.258066e-55 | -8.615850e-47 |
Msa0179000 | Msa0308200 | 0.818724 | 1.688325e-52 | -8.615850e-47 |
Msa0179000 | Msa0308220 | 0.819501 | 1.123646e-52 | -8.615850e-47 |
Msa0179000 | Msa0318880 | 0.825073 | 5.718936e-54 | -8.615850e-47 |
Msa0179000 | Msa0322590 | 0.826271 | 2.973739e-54 | -8.615850e-47 |
Msa0179000 | Msa0343190 | 0.834973 | 2.198151e-56 | -8.615850e-47 |
Msa0179000 | Msa0346990 | 0.825798 | 3.851610e-54 | -8.615850e-47 |
Msa0179000 | Msa0367740 | 0.810456 | 1.142663e-50 | -8.615850e-47 |
Msa0179000 | Msa0376020 | 0.803782 | 2.958267e-49 | -8.615850e-47 |
Msa0179000 | Msa0377440 | 0.828118 | 1.073720e-54 | -8.615850e-47 |
Msa0179000 | Msa0381000 | 0.841565 | 4.398469e-58 | -8.615850e-47 |
Msa0179000 | Msa0381080 | 0.843654 | 1.227152e-58 | -8.615850e-47 |
Msa0179000 | Msa0387050 | 0.805198 | 1.498778e-49 | -8.615850e-47 |
Msa0179000 | Msa0390960 | 0.811291 | 7.536509e-51 | -8.615850e-47 |
Msa0179000 | Msa0392200 | 0.816798 | 4.592217e-52 | -8.615850e-47 |
Msa0179000 | Msa0404700 | 0.802871 | 4.566932e-49 | -8.615850e-47 |
Msa0179000 | Msa0410300 | 0.812172 | 4.846148e-51 | -8.615850e-47 |
Msa0179000 | Msa0417650 | 0.845690 | 3.469323e-59 | -8.615850e-47 |
Msa0179000 | Msa0417730 | 0.831160 | 1.954147e-55 | -8.615850e-47 |
Msa0179000 | Msa0432480 | 0.800919 | 1.149812e-48 | -8.615850e-47 |
Msa0179000 | Msa0442310 | 0.801867 | 7.351529e-49 | -8.615850e-47 |
Msa0179000 | Msa0446900 | 0.818854 | 1.577057e-52 | -8.615850e-47 |
Msa0179000 | Msa0461590 | 0.824312 | 8.640108e-54 | -8.615850e-47 |
Msa0179000 | Msa0474700 | 0.803346 | 3.642606e-49 | -8.615850e-47 |
Msa0179000 | Msa0480780 | 0.802149 | 6.432645e-49 | -8.615850e-47 |
Msa0179000 | Msa0516020 | 0.804551 | 2.045921e-49 | -8.615850e-47 |
Msa0179000 | Msa0517650 | 0.805084 | 1.583428e-49 | -8.615850e-47 |
Msa0179000 | Msa0518960 | 0.800710 | 1.268746e-48 | -8.615850e-47 |
Msa0179000 | Msa0537770 | 0.808179 | 3.517174e-50 | -8.615850e-47 |
Msa0179000 | Msa0549280 | 0.847943 | 8.395690e-60 | -8.615850e-47 |
Msa0179000 | Msa0573040 | 0.811443 | 6.983706e-51 | -8.615850e-47 |
Msa0179000 | Msa0578090 | 0.821714 | 3.486800e-53 | -8.615850e-47 |
Msa0179000 | Msa0580640 | 0.849679 | 2.770244e-60 | -8.615850e-47 |
Msa0179000 | Msa0586850 | 0.801897 | 7.249025e-49 | -8.615850e-47 |
Msa0179000 | Msa0588120 | 0.811725 | 6.064005e-51 | -8.615850e-47 |
Msa0179000 | Msa0618950 | 0.810473 | 1.132689e-50 | -8.615850e-47 |
Msa0179000 | Msa0628500 | 0.818530 | 1.868352e-52 | -8.615850e-47 |
Msa0179000 | Msa0642250 | 0.831281 | 1.824899e-55 | -8.615850e-47 |
Msa0179000 | Msa0664760 | 0.800172 | 1.632888e-48 | -8.615850e-47 |
Msa0179000 | Msa0675990 | 0.808489 | 3.019968e-50 | -8.615850e-47 |
Msa0179000 | Msa0687230 | 0.822662 | 2.100946e-53 | -8.615850e-47 |
Msa0179000 | Msa0687450 | 0.854039 | 1.604806e-61 | -8.615850e-47 |
Msa0179000 | Msa0705390 | 0.812015 | 5.244243e-51 | -8.615850e-47 |
Msa0179000 | Msa0713320 | 0.825140 | 5.514981e-54 | -8.615850e-47 |
Msa0179000 | Msa0714920 | 0.820303 | 7.365061e-53 | -8.615850e-47 |
Msa0179000 | Msa0744090 | 0.825851 | 3.741099e-54 | -8.615850e-47 |
Msa0179000 | Msa0744100 | 0.801146 | 1.033448e-48 | -8.615850e-47 |
Msa0179000 | Msa0749400 | 0.818975 | 1.480825e-52 | -8.615850e-47 |
Msa0179000 | Msa0756530 | 0.802028 | 6.812804e-49 | -8.615850e-47 |
Msa0179000 | Msa0756930 | 0.842686 | 2.221816e-58 | -8.615850e-47 |
Msa0179000 | Msa0773200 | 0.802953 | 4.392268e-49 | -8.615850e-47 |
Msa0179000 | Msa0788120 | 0.822804 | 1.946662e-53 | -8.615850e-47 |
Msa0179000 | Msa0795660 | 0.819436 | 1.162319e-52 | -8.615850e-47 |
Msa0179000 | Msa0820890 | 0.817150 | 3.827557e-52 | -8.615850e-47 |
Msa0179000 | Msa0825270 | 0.805118 | 1.557697e-49 | -8.615850e-47 |
Msa0179000 | Msa0825280 | 0.828514 | 8.620049e-55 | -8.615850e-47 |
Msa0179000 | Msa0829190 | 0.813629 | 2.323192e-51 | -8.615850e-47 |
Msa0179000 | Msa0836500 | 0.826699 | 2.350901e-54 | -8.615850e-47 |
Msa0179000 | Msa0850710 | 0.815191 | 1.049143e-51 | -8.615850e-47 |
Msa0179000 | Msa0851470 | 0.829918 | 3.933969e-55 | -8.615850e-47 |
Msa0179000 | Msa0861830 | 0.813245 | 2.821763e-51 | -8.615850e-47 |
Msa0179000 | Msa0880040 | 0.808741 | 2.667854e-50 | -8.615850e-47 |
Msa0179000 | Msa0881580 | 0.800450 | 1.433368e-48 | -8.615850e-47 |
Msa0179000 | Msa0888940 | 0.801677 | 8.042946e-49 | -8.615850e-47 |
Msa0179000 | Msa0899350 | 0.817870 | 2.635281e-52 | -8.615850e-47 |
Msa0179000 | Msa0939000 | 0.806045 | 9.953645e-50 | -8.615850e-47 |
Msa0179000 | Msa0945240 | 0.801461 | 8.907960e-49 | -8.615850e-47 |
Msa0179000 | Msa0959010 | 0.815875 | 7.388260e-52 | -8.615850e-47 |
Msa0179000 | Msa0965020 | 0.810737 | 9.931743e-51 | -8.615850e-47 |
Msa0179000 | Msa0980940 | 0.822208 | 2.679406e-53 | -8.615850e-47 |
Msa0179000 | Msa0981310 | 0.818375 | 2.025657e-52 | -8.615850e-47 |
Msa0179000 | Msa0981430 | 0.805887 | 1.074211e-49 | -8.615850e-47 |
Msa0179000 | Msa0996020 | 0.815814 | 7.621237e-52 | -8.615850e-47 |
Msa0179000 | Msa1010070 | 0.822632 | 2.135673e-53 | -8.615850e-47 |
Msa0179000 | Msa1032170 | 0.801512 | 8.694581e-49 | -8.615850e-47 |
Msa0179000 | Msa1035930 | 0.820441 | 6.847738e-53 | -8.615850e-47 |
Msa0179000 | Msa1036740 | 0.816928 | 4.294466e-52 | -8.615850e-47 |
Msa0179000 | Msa1072600 | 0.805865 | 1.086062e-49 | -8.615850e-47 |
Msa0179000 | Msa1087510 | -0.804789 | 1.824760e-49 | -8.615850e-47 |
Msa0179000 | Msa1098890 | 0.801465 | 8.888887e-49 | -8.615850e-47 |
Msa0179000 | Msa1113590 | 0.812611 | 3.886353e-51 | -8.615850e-47 |
Msa0179000 | Msa1129690 | 0.817712 | 2.860266e-52 | -8.615850e-47 |
Msa0179000 | Msa1130530 | 0.811238 | 7.738325e-51 | -8.615850e-47 |
Msa0179000 | Msa1163870 | 0.806020 | 1.007584e-49 | -8.615850e-47 |
Msa0179000 | Msa1174850 | 0.803531 | 3.334599e-49 | -8.615850e-47 |
Msa0179000 | Msa1178050 | 0.805141 | 1.540117e-49 | -8.615850e-47 |
Msa0179000 | Msa1199710 | 0.808500 | 3.004774e-50 | -8.615850e-47 |
Msa0179000 | Msa1211340 | 0.802459 | 5.553900e-49 | -8.615850e-47 |
Msa0179000 | Msa1227320 | 0.821433 | 4.047874e-53 | -8.615850e-47 |
Msa0179000 | Msa1240340 | 0.805751 | 1.147281e-49 | -8.615850e-47 |
Msa0179000 | Msa1259640 | 0.807996 | 3.847508e-50 | -8.615850e-47 |
Msa0179000 | Msa1280620 | 0.846127 | 2.640048e-59 | -8.615850e-47 |
Msa0179000 | Msa1296300 | 0.815020 | 1.144941e-51 | -8.615850e-47 |
Msa0179000 | Msa1299330 | 0.812585 | 3.936669e-51 | -8.615850e-47 |
Msa0179000 | Msa1306390 | 0.812318 | 4.503536e-51 | -8.615850e-47 |
Msa0179000 | Msa1320820 | 0.838630 | 2.566236e-57 | -8.615850e-47 |
Msa0179000 | Msa1329790 | 0.803851 | 2.861874e-49 | -8.615850e-47 |
Msa0179000 | Msa1338250 | 0.822848 | 1.901631e-53 | -8.615850e-47 |
Msa0179000 | Msa1340040 | -0.804881 | 1.745812e-49 | -8.615850e-47 |
Msa0179000 | Msa1341490 | 0.813624 | 2.329130e-51 | -8.615850e-47 |
Msa0179000 | Msa1393800 | 0.827308 | 1.680552e-54 | -8.615850e-47 |
Msa0179000 | Msa1398860 | 0.802801 | 4.722722e-49 | -8.615850e-47 |
Msa0179000 | Msa1420250 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
Msa0179000 | Msa1422840 | 0.833620 | 4.802044e-56 | -8.615850e-47 |
Msa0179000 | Msa1424780 | 0.815354 | 9.648851e-52 | -8.615850e-47 |
Msa0179000 | Msa1426570 | 0.802229 | 6.195317e-49 | -8.615850e-47 |
Msa0179000 | Msa1438450 | 0.803659 | 3.136131e-49 | -8.615850e-47 |
Msa0179000 | Msa1438520 | 0.809491 | 1.843457e-50 | -8.615850e-47 |
Msa0179000 | Msa1444400 | 0.810991 | 8.753010e-51 | -8.615850e-47 |
Msa0179000 | Msa1452480 | 0.879776 | 9.452626e-70 | -8.615850e-47 |
Msa0179000 | Msa1463470 | 0.809090 | 2.247261e-50 | -8.615850e-47 |
Msa0179000 | Msa1464290 | 0.813831 | 2.097553e-51 | -8.615850e-47 |
Msa0179000 | Msa1466590 | 0.804527 | 2.070243e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0179000 | MtrunA17_Chr1g0207661 | 97.415 | 851 | 22 | 0 | 1 | 851 | 1 | 851 | 0.0 | 1704 |
Msa0179000 | MtrunA17_Chr2g0298701 | 32.041 | 490 | 234 | 10 | 245 | 726 | 135 | 533 | 4.69e-67 | 237 |
Msa0179000 | MtrunA17_Chr6g0469311 | 85.417 | 48 | 7 | 0 | 101 | 148 | 50 | 97 | 5.57e-18 | 84.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0179000 | AT3G19510.1 | 47.170 | 530 | 226 | 13 | 231 | 726 | 158 | 667 | 7.69e-127 | 398 |
Msa0179000 | AT3G19510.2 | 47.170 | 530 | 226 | 13 | 231 | 726 | 158 | 667 | 7.69e-127 | 398 |
Msa0179000 | AT4G29940.1 | 47.701 | 174 | 91 | 0 | 249 | 422 | 104 | 277 | 7.89e-53 | 198 |
Msa0179000 | AT4G29940.2 | 47.701 | 174 | 91 | 0 | 249 | 422 | 104 | 277 | 8.59e-53 | 197 |
Find 236 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGGGATCTATTTCAAAATT+TGG | 0.074634 | 1_4:-66425038 | Msa0179000:CDS |
GAGGATTTGACTCCGGTTTC+TGG | 0.158146 | 1_4:-66423751 | Msa0179000:CDS |
GATGATGTTAAGAACTTTAA+AGG | 0.214262 | 1_4:-66423850 | Msa0179000:CDS |
TGGTGACCCTGGAGTTATTT+TGG | 0.234456 | 1_4:+66423188 | None:intergenic |
TTTATATGGATGCGGATTAA+AGG | 0.244459 | 1_4:-66421562 | Msa0179000:three_prime_UTR |
GAACTTGTTAACGACTTGTT+AGG | 0.256613 | 1_4:-66424586 | Msa0179000:CDS |
AACTTGATTGATGCTTATTC+TGG | 0.261982 | 1_4:-66426871 | Msa0179000:CDS |
TTCTTCTCCTTCTCCATGTT+AGG | 0.264991 | 1_4:+66428616 | None:intergenic |
CCAAAGCTTGCTTGCTTGCT+TGG | 0.272806 | 1_4:-66427989 | Msa0179000:five_prime_UTR |
CGTGCATCCTTCAAGTGTTT+TGG | 0.276722 | 1_4:+66423080 | None:intergenic |
TATACATACTCCTCCAAATC+TGG | 0.284287 | 1_4:+66428586 | None:intergenic |
AGAAAGCTTGGCGCAAGAAC+TGG | 0.299690 | 1_4:-66422490 | Msa0179000:CDS |
TAATGTGAGCATCATTTATA+TGG | 0.300014 | 1_4:-66421576 | Msa0179000:three_prime_UTR |
TAATTTGCGTCGCAGAATTT+CGG | 0.302386 | 1_4:+66425066 | None:intergenic |
TCAATCGGTTCAGGATCTTT+AGG | 0.304332 | 1_4:+66427045 | None:intergenic |
GAGCTACTGGATCCACCTTC+TGG | 0.306748 | 1_4:-66427360 | Msa0179000:CDS |
GACTTACTTCATACAGCTTT+TGG | 0.314803 | 1_4:+66423701 | None:intergenic |
TGGATCTCAAACGATATTCT+TGG | 0.321274 | 1_4:-66421873 | Msa0179000:three_prime_UTR |
CTCAATCTTTGATTGCTTAC+CGG | 0.331704 | 1_4:-66422017 | Msa0179000:CDS |
GTCTCTCTCTTACTGATTCC+TGG | 0.333479 | 1_4:-66424558 | Msa0179000:CDS |
TCAGAATCAAACAAAGATTC+AGG | 0.338756 | 1_4:+66424989 | None:intergenic |
TAGTTGTCAGGTAGCAGTTT+TGG | 0.339428 | 1_4:-66421743 | Msa0179000:three_prime_UTR |
CCAGCAGCTGTAGCTGCTTC+GGG | 0.350968 | 1_4:+66424225 | None:intergenic |
GGATCTTGCTGCTACAATTA+AGG | 0.352745 | 1_4:-66423917 | Msa0179000:CDS |
TCCAGCAGCTGTAGCTGCTT+CGG | 0.353688 | 1_4:+66424224 | None:intergenic |
GAAGAACGGTAGCCCAGATT+TGG | 0.363105 | 1_4:-66428599 | Msa0179000:five_prime_UTR |
GAATTTGATTTCACTTGAAC+AGG | 0.365153 | 1_4:+66427390 | None:intergenic |
TTGTGTGATGTGTGTTTCCT+TGG | 0.366078 | 1_4:-66427693 | Msa0179000:five_prime_UTR |
GCCCGTTGAATCTCCTTCTC+TGG | 0.369302 | 1_4:+66425094 | None:intergenic |
CTTGAAGGATGCACGGAATC+TGG | 0.377830 | 1_4:-66423072 | Msa0179000:CDS |
CCAGGTACAACTAGCTTTAA+CGG | 0.377993 | 1_4:+66427949 | None:intergenic |
CGGGTATCACCAGCTCTGTT+TGG | 0.380960 | 1_4:-66424777 | Msa0179000:CDS |
ATCATTTGGTGGAAACAATA+AGG | 0.381442 | 1_4:+66421691 | None:intergenic |
TATCGAAGAAGTATGTATTA+AGG | 0.385742 | 1_4:-66427119 | Msa0179000:CDS |
CCAAGCAAGCAAGCAAGCTT+TGG | 0.389596 | 1_4:+66427989 | None:intergenic |
GACAGTTCATCGGTTATAGA+TGG | 0.390879 | 1_4:+66423802 | None:intergenic |
TGAATCTTTGTTTGATTCTG+AGG | 0.392645 | 1_4:-66424987 | Msa0179000:CDS |
TTCGCATCCTCTGGAGCATC+AGG | 0.392731 | 1_4:+66424141 | None:intergenic |
CCTTCAACCTTCGCATCCTC+TGG | 0.393078 | 1_4:+66424132 | None:intergenic |
TTATAGGTTGACAAATGGTT+TGG | 0.393912 | 1_4:-66422364 | Msa0179000:intron |
GAGCTGAAAATAAAGGAGAT+AGG | 0.394447 | 1_4:-66422210 | Msa0179000:CDS |
GAGCAGGAACAGATTGTGTT+TGG | 0.396385 | 1_4:+66427262 | None:intergenic |
AGGATTTGACTCCGGTTTCT+GGG | 0.404664 | 1_4:-66423750 | Msa0179000:CDS |
GGACTAATGATTAGTTCAAC+TGG | 0.405013 | 1_4:-66427672 | Msa0179000:exon |
CTTAGACTTACGAAAGGCTT+TGG | 0.410092 | 1_4:-66427728 | Msa0179000:five_prime_UTR |
CCCGAAGCAGCTACAGCTGC+TGG | 0.412983 | 1_4:-66424225 | Msa0179000:CDS |
GACAGTGGAGCTGAAAATAA+AGG | 0.414026 | 1_4:-66422265 | Msa0179000:CDS |
GTATCTTTAGCACCAGGATT+GGG | 0.417924 | 1_4:+66423979 | None:intergenic |
CAAGTGAAAACAGAATCTTC+TGG | 0.418110 | 1_4:-66427240 | Msa0179000:CDS |
TCTTCTCCTTCTCCATGTTA+GGG | 0.420095 | 1_4:+66428617 | None:intergenic |
AATCAAAGATTGAGCCGTTA+TGG | 0.420656 | 1_4:+66422026 | None:intergenic |
ACTTGGAGAAGCTGTTGTTC+AGG | 0.422804 | 1_4:-66423022 | Msa0179000:intron |
TTATTTGAGGCGTTTCCATT+TGG | 0.424610 | 1_4:+66423168 | None:intergenic |
GAAACGAGTGATGCAGTTAC+TGG | 0.424624 | 1_4:-66427297 | Msa0179000:CDS |
GATTTCACTTGAACAGGAAC+GGG | 0.425167 | 1_4:+66427396 | None:intergenic |
CCAGAGGATGCGAAGGTTGA+AGG | 0.427357 | 1_4:-66424132 | Msa0179000:CDS |
TCTTTAGCAGAGCCAGATCT+TGG | 0.428193 | 1_4:-66423778 | Msa0179000:CDS |
TTTGATTGCTTACCGGTAGC+TGG | 0.429095 | 1_4:-66422010 | Msa0179000:CDS |
CATCATCACTAGTATCACTA+TGG | 0.433662 | 1_4:+66423259 | None:intergenic |
ATGCTGATGGGTGTTCCTCT+TGG | 0.436575 | 1_4:+66423131 | None:intergenic |
GATCCCGATGCTCCCAATCC+TGG | 0.436787 | 1_4:-66423991 | Msa0179000:CDS |
TCCTCGGATGATCATCATCT+TGG | 0.437213 | 1_4:-66421893 | Msa0179000:three_prime_UTR |
GTAACAGTATCAATCGGTTC+AGG | 0.439745 | 1_4:+66427036 | None:intergenic |
ATCTGCTTCTGAGAAATTTG+AGG | 0.440404 | 1_4:-66424076 | Msa0179000:CDS |
TTCTCAGTCGTAAAATCGTT+GGG | 0.440583 | 1_4:+66427636 | None:intergenic |
CGGTTATAGATGGCTTCTTA+CGG | 0.441698 | 1_4:+66423812 | None:intergenic |
CTCAGAGTCAGATGTGAAAT+CGG | 0.442930 | 1_4:+66423939 | None:intergenic |
AAATTCTGTGAATGAGCTAC+TGG | 0.443097 | 1_4:-66427373 | Msa0179000:CDS |
CTCCCTTATAGGTTGACAAA+TGG | 0.447598 | 1_4:-66422369 | Msa0179000:intron |
GAAAGCGGAGCTGAAAATAA+AGG | 0.453174 | 1_4:-66422217 | Msa0179000:CDS |
ACTTGAACAGGAACGGGTTG+TGG | 0.457052 | 1_4:+66427402 | None:intergenic |
ATGCTTATTCTGGTGAGGGC+TGG | 0.457759 | 1_4:-66426861 | Msa0179000:CDS |
TCACCCACCAAAACACTTGA+AGG | 0.460627 | 1_4:-66423087 | Msa0179000:CDS |
GAAAAGAAATGTTGAAAGGC+TGG | 0.463300 | 1_4:-66423728 | Msa0179000:CDS |
TCATCTTTGCAATCACATCC+TGG | 0.464187 | 1_4:+66424616 | None:intergenic |
TAGTAGCCAACACTTTGGTC+TGG | 0.464284 | 1_4:+66424837 | None:intergenic |
TCATGTAAGGAGGCCAGTCC+AGG | 0.466183 | 1_4:-66422313 | Msa0179000:CDS |
TACAGCTGCTGGAAGTATCT+TGG | 0.467307 | 1_4:-66424214 | Msa0179000:CDS |
AAACCCCAAGCTCGAAGAAA+AGG | 0.472897 | 1_4:-66422090 | Msa0179000:CDS |
TCAATACATGGGTCTTCCTT+CGG | 0.473784 | 1_4:-66424037 | Msa0179000:CDS |
GCACCAGGATTGGGAGCATC+GGG | 0.473958 | 1_4:+66423988 | None:intergenic |
AGTATCTTTAGCACCAGGAT+TGG | 0.476428 | 1_4:+66423978 | None:intergenic |
AAATCCTCTTCACCAAGATC+TGG | 0.477201 | 1_4:+66423766 | None:intergenic |
GCGTTTCCATTTGGTGACCC+TGG | 0.477588 | 1_4:+66423177 | None:intergenic |
GCGACAGAGCTCTGCGGTCG+AGG | 0.478343 | 1_4:-66427083 | Msa0179000:CDS |
TCTGAGAAATTTGAGGATCC+AGG | 0.479451 | 1_4:-66424069 | Msa0179000:CDS |
ATAAGGTCTCCATAACTAAA+CGG | 0.482679 | 1_4:+66421708 | None:intergenic |
AACTTGTTAACGACTTGTTA+GGG | 0.483719 | 1_4:-66424585 | Msa0179000:CDS |
CTTCTCAGTCGTAAAATCGT+TGG | 0.484570 | 1_4:+66427635 | None:intergenic |
GTGAGGGCTGGAAAGGATAC+AGG | 0.485234 | 1_4:-66426849 | Msa0179000:intron |
ATGTATTGATCCTCATGGCC+TGG | 0.487322 | 1_4:+66424051 | None:intergenic |
GCAGACATCTGAAGCAGGGC+TGG | 0.488443 | 1_4:-66422050 | Msa0179000:CDS |
ATTGATGCTTATTCTGGTGA+GGG | 0.490730 | 1_4:-66426865 | Msa0179000:CDS |
AGCACCAGGATTGGGAGCAT+CGG | 0.491856 | 1_4:+66423987 | None:intergenic |
GGTCAAATGCGAGTGAAACA+TGG | 0.492083 | 1_4:-66427162 | Msa0179000:CDS |
ATGAAATGAAGACAAAAGAA+AGG | 0.492286 | 1_4:-66426999 | Msa0179000:CDS |
GTTCCTCTTGGCAGTACGGC+GGG | 0.492474 | 1_4:+66423143 | None:intergenic |
GAGCCGCAGACATCTGAAGC+AGG | 0.495421 | 1_4:-66422055 | Msa0179000:CDS |
AGGAGATAATGCTTCGCAGC+AGG | 0.495905 | 1_4:-66422245 | Msa0179000:CDS |
TCTCTCTCTTACTGATTCCT+GGG | 0.498409 | 1_4:-66424557 | Msa0179000:CDS |
AAGTATGTATTAAGGTCGTT+AGG | 0.498676 | 1_4:-66427111 | Msa0179000:CDS |
GATTGATGCTTATTCTGGTG+AGG | 0.499509 | 1_4:-66426866 | Msa0179000:CDS |
TTATTGCTTGTGCCAGCTAC+CGG | 0.500696 | 1_4:+66421998 | None:intergenic |
AAGTATCTTGGATCACAACC+TGG | 0.500741 | 1_4:-66424202 | Msa0179000:CDS |
AGCTGAAAATAAAGGAGATA+GGG | 0.501616 | 1_4:-66422209 | Msa0179000:CDS |
GACAGAGAACAAAGTGTGCT+TGG | 0.502185 | 1_4:-66427552 | Msa0179000:CDS |
ATAACTCCAGGGTCACCAAA+TGG | 0.504477 | 1_4:-66423183 | Msa0179000:CDS |
GGATCTTCATACAATAAACT+TGG | 0.506409 | 1_4:-66423039 | Msa0179000:CDS |
CCGTTAAAGCTAGTTGTACC+TGG | 0.507504 | 1_4:-66427949 | Msa0179000:intron |
GCCAGAGAAGGAGATTCAAC+GGG | 0.508450 | 1_4:-66425095 | Msa0179000:CDS |
TACTAGTGATGATGAAGATT+GGG | 0.508913 | 1_4:-66423250 | Msa0179000:CDS |
GGGTGTTCCTCTTGGCAGTA+CGG | 0.509060 | 1_4:+66423139 | None:intergenic |
GTTCCGACATTCATCATGTA+AGG | 0.513678 | 1_4:-66422326 | Msa0179000:CDS |
GAAAGCTTGGCGCAAGAACT+GGG | 0.514904 | 1_4:-66422489 | Msa0179000:CDS |
ACTGCATCTCTCATTTCGCC+AGG | 0.515178 | 1_4:+66427447 | None:intergenic |
GCGTCGCAGAATTTCGGACT+TGG | 0.515667 | 1_4:+66425072 | None:intergenic |
AGACTTACGAAAGGCTTTGG+TGG | 0.516089 | 1_4:-66427725 | Msa0179000:five_prime_UTR |
GAGAGAAAGAGAGGGATGAG+TGG | 0.516963 | 1_4:+66428505 | None:intergenic |
ATTATTAGTAGCCAACACTT+TGG | 0.517226 | 1_4:+66424832 | None:intergenic |
GAACGGTAGCCCAGATTTGG+AGG | 0.518288 | 1_4:-66428596 | Msa0179000:five_prime_UTR |
ATCTCAAACGATATTCTTGG+AGG | 0.518724 | 1_4:-66421870 | Msa0179000:three_prime_UTR |
ATACTAGTGATGATGAAGAT+TGG | 0.521341 | 1_4:-66423251 | Msa0179000:CDS |
CTGCGGCTTACAGTTCCACC+TGG | 0.522100 | 1_4:-66424658 | Msa0179000:intron |
GGTTTGGCAATTCTCGTTGG+AGG | 0.524613 | 1_4:-66422348 | Msa0179000:CDS |
TACAGTTCCACCTGGCGATG+AGG | 0.529326 | 1_4:-66424650 | Msa0179000:intron |
CATAACCAACCCTCATCGCC+AGG | 0.530946 | 1_4:+66424640 | None:intergenic |
AATCTTGCTACCTTACGAAA+AGG | 0.533200 | 1_4:+66421942 | None:intergenic |
CTTACGAAAGGCTTTGGTGG+TGG | 0.533868 | 1_4:-66427722 | Msa0179000:five_prime_UTR |
TGATTTCACTTGAACAGGAA+CGG | 0.534261 | 1_4:+66427395 | None:intergenic |
ACGAAAGGCTTTGGTGGTGG+TGG | 0.534721 | 1_4:-66427719 | Msa0179000:five_prime_UTR |
AGTAATATCTCAGTTGAGCT+CGG | 0.534961 | 1_4:+66426917 | None:intergenic |
CTGGGAAAAGAAATGTTGAA+AGG | 0.535766 | 1_4:-66423732 | Msa0179000:CDS |
AATGGTTTGGCAATTCTCGT+TGG | 0.540198 | 1_4:-66422351 | Msa0179000:CDS |
TTGGATTCGTTATGTGCTGA+AGG | 0.540214 | 1_4:-66425019 | Msa0179000:CDS |
GTGATGGTGCTTGTGACCGC+GGG | 0.542507 | 1_4:-66424796 | Msa0179000:CDS |
AGTACGGCGGGAATTATTTG+AGG | 0.542860 | 1_4:+66423155 | None:intergenic |
ACGGACCGCAAAAGAAAGCT+TGG | 0.543668 | 1_4:-66422502 | Msa0179000:CDS |
ATTCGTTATGTGCTGAAGGA+AGG | 0.544325 | 1_4:-66425015 | Msa0179000:CDS |
AATTCTGTTATTCAACTGCC+TGG | 0.546096 | 1_4:-66427465 | Msa0179000:CDS |
GAATCTTTGTTTGATTCTGA+GGG | 0.547335 | 1_4:-66424986 | Msa0179000:CDS |
AGGTAGTAATGCTTCACAGC+AGG | 0.547657 | 1_4:-66422293 | Msa0179000:CDS |
AGGCCATGAGGATCAATACA+TGG | 0.550655 | 1_4:-66424049 | Msa0179000:CDS |
TATTCTGGTGAGGGCTGGAA+AGG | 0.551866 | 1_4:-66426856 | Msa0179000:CDS |
AGAGCCAGATCTTGGTGAAG+AGG | 0.552428 | 1_4:-66423770 | Msa0179000:CDS |
TTCGCAACATCTCCAGAAGG+TGG | 0.552717 | 1_4:+66427348 | None:intergenic |
TTGTGGTTGTTCTTCAACAA+GGG | 0.552863 | 1_4:+66427419 | None:intergenic |
ATACATACTCCTCCAAATCT+GGG | 0.553149 | 1_4:+66428587 | None:intergenic |
ACAGTTCCACCTGGCGATGA+GGG | 0.553392 | 1_4:-66424649 | Msa0179000:intron |
GAGCATCATTTATATGGATG+CGG | 0.555201 | 1_4:-66421570 | Msa0179000:three_prime_UTR |
TTCCACCTGGCGATGAGGGT+TGG | 0.555753 | 1_4:-66424645 | Msa0179000:CDS |
AGGTTCGATCTAACGTGAAA+CGG | 0.556565 | 1_4:+66428479 | None:intergenic |
AGCCAGAGAAGGAGATTCAA+CGG | 0.560164 | 1_4:-66425096 | Msa0179000:CDS |
GGAGCATCAACTAGTTTCCC+AGG | 0.560671 | 1_4:-66422134 | Msa0179000:CDS |
TTCATCTTCATATTCCTCGC+CGG | 0.562131 | 1_4:-66428453 | Msa0179000:five_prime_UTR |
GTCAAATGCGAGTGAAACAT+GGG | 0.562133 | 1_4:-66427161 | Msa0179000:CDS |
AGATGTGACATCATCTTGTC+CGG | 0.564545 | 1_4:+66423882 | None:intergenic |
TCTTCAGTATCTTTAGCACC+AGG | 0.564626 | 1_4:+66423973 | None:intergenic |
AACGGTGAGAGAGAAAGAGA+GGG | 0.567501 | 1_4:+66428497 | None:intergenic |
TGCTGTGAAGCATTACTACC+TGG | 0.569191 | 1_4:+66422295 | None:intergenic |
CATCTTTGCAATCACATCCT+GGG | 0.569916 | 1_4:+66424617 | None:intergenic |
ACATCAGTAACAGTATCAAT+CGG | 0.571296 | 1_4:+66427030 | None:intergenic |
CTGACCGCCAAAATAACTCC+AGG | 0.571543 | 1_4:-66423195 | Msa0179000:CDS |
TCTTCATATTCCTCGCCGGA+CGG | 0.572009 | 1_4:-66428449 | Msa0179000:five_prime_UTR |
ATTAGTTCTCAAAACGAACC+TGG | 0.572921 | 1_4:-66427321 | Msa0179000:CDS |
AAATGAAGACAAAAGAAAGG+AGG | 0.573526 | 1_4:-66426996 | Msa0179000:CDS |
GACCCATGTATTGATCCTCA+TGG | 0.576189 | 1_4:+66424046 | None:intergenic |
TCGCAGCAGGCCAGTGAAAG+CGG | 0.580172 | 1_4:-66422232 | Msa0179000:CDS |
CTAGTTTCCCAGGCGACAAG+TGG | 0.581325 | 1_4:-66422124 | Msa0179000:CDS |
TCTACTTGGAGTAGCAGTGT+CGG | 0.582959 | 1_4:+66423227 | None:intergenic |
AAACGGTGAGAGAGAAAGAG+AGG | 0.583261 | 1_4:+66428496 | None:intergenic |
TGGTGAAGAGGATTTGACTC+CGG | 0.583636 | 1_4:-66423758 | Msa0179000:CDS |
TGATGTCACATCTGCACCGT+TGG | 0.585319 | 1_4:-66423872 | Msa0179000:CDS |
TGAAGCATTACTACCTGGAC+TGG | 0.585531 | 1_4:+66422300 | None:intergenic |
TGTTCCTCTTGGCAGTACGG+CGG | 0.587710 | 1_4:+66423142 | None:intergenic |
ATGGAGGATCCAAACAGAGC+TGG | 0.587853 | 1_4:+66424768 | None:intergenic |
TTGAACTAATCATTAGTCCA+AGG | 0.588259 | 1_4:+66427676 | None:intergenic |
GGCGAGGAATATGAAGATGA+AGG | 0.590383 | 1_4:+66428455 | None:intergenic |
ATTGTGTTTGGTCTTCAACA+AGG | 0.590483 | 1_4:+66427274 | None:intergenic |
TGTGATGGTGCTTGTGACCG+CGG | 0.591361 | 1_4:-66424797 | Msa0179000:CDS |
GTTGTGGTTGTTCTTCAACA+AGG | 0.591435 | 1_4:+66427418 | None:intergenic |
CTCTCTTACTGATTCCTGGG+AGG | 0.591608 | 1_4:-66424554 | Msa0179000:intron |
TCTTCCTTCGGAAGATTCAG+AGG | 0.592723 | 1_4:-66424025 | Msa0179000:CDS |
AAGAAAATCAATATCCAGAA+CGG | 0.595382 | 1_4:-66422521 | Msa0179000:CDS |
TGCTAAAGATGACAGTTCAT+CGG | 0.595530 | 1_4:+66423792 | None:intergenic |
GTGACATAGTAATCTCCGTC+CGG | 0.597495 | 1_4:+66428434 | None:intergenic |
ACTGCATCACTCGTTTCACC+AGG | 0.602033 | 1_4:+66427303 | None:intergenic |
TTACTGTCTTCAGTTAACAA+TGG | 0.602560 | 1_4:+66424749 | None:intergenic |
CTGTCTTCAGTTAACAATGG+AGG | 0.604628 | 1_4:+66424752 | None:intergenic |
TCGCAGCAAGCCACTGACAG+CGG | 0.604697 | 1_4:-66422178 | Msa0179000:CDS |
AGCCGCAGACATCTGAAGCA+GGG | 0.606461 | 1_4:-66422054 | Msa0179000:CDS |
GTAGTTCTTAGACTTACGAA+AGG | 0.610188 | 1_4:-66427734 | Msa0179000:intron |
AGGTGAAAACAAAGGAGAGA+CGG | 0.611195 | 1_4:-66422155 | Msa0179000:CDS |
CAAAACACTTGAAGGATGCA+CGG | 0.611620 | 1_4:-66423079 | Msa0179000:CDS |
TCGTGTGAGATTGAGATCCT+CGG | 0.612290 | 1_4:-66421909 | Msa0179000:three_prime_UTR |
AGGAATATGAAGATGAAGGA+AGG | 0.612986 | 1_4:+66428459 | None:intergenic |
TTGTTAATAGTGATGCGACA+TGG | 0.614031 | 1_4:+66421612 | None:intergenic |
AATGATATAATTCTCTGTGA+TGG | 0.615057 | 1_4:-66424812 | Msa0179000:CDS |
AATCATCTGAAGGAAGTCCC+AGG | 0.615967 | 1_4:+66424184 | None:intergenic |
CCTCCTTACATGATGAATGT+CGG | 0.617098 | 1_4:+66422323 | None:intergenic |
GCAAAGCCCTAACATGGAGA+AGG | 0.618562 | 1_4:-66428623 | Msa0179000:five_prime_UTR |
TCATCCTCTGAATCTTCCGA+AGG | 0.620563 | 1_4:+66424021 | None:intergenic |
GGATCTCAATCTCACACGAT+AGG | 0.621035 | 1_4:+66421913 | None:intergenic |
ATTAAGGATAACATGTCCAC+CGG | 0.621242 | 1_4:-66423901 | Msa0179000:CDS |
CGATTTCACATCTGACTCTG+AGG | 0.622480 | 1_4:-66423938 | Msa0179000:CDS |
GAAGCAGGGCTGGTCCATAA+CGG | 0.623774 | 1_4:-66422040 | Msa0179000:CDS |
AACAACGCAAAGCCCTAACA+TGG | 0.624242 | 1_4:-66428629 | Msa0179000:five_prime_UTR |
ACAACTAGCTTTAACGGTAA+CGG | 0.625737 | 1_4:+66427955 | None:intergenic |
TGAGGGAGAGATTGATAGCG+AGG | 0.625849 | 1_4:-66424969 | Msa0179000:CDS |
AAAATGCCAGACCAAAGTGT+TGG | 0.625899 | 1_4:-66424843 | Msa0179000:CDS |
CAGCAAGCCACTGACAGCGG+AGG | 0.628403 | 1_4:-66422175 | Msa0179000:CDS |
ATAGTAATCTCCGTCCGGCG+AGG | 0.629589 | 1_4:+66428439 | None:intergenic |
TCATCGTCAGAATCATCTGA+AGG | 0.631384 | 1_4:+66424174 | None:intergenic |
GCTGAAAATAAAGGAGATAG+GGG | 0.633536 | 1_4:-66422208 | Msa0179000:CDS |
TGATGCTCCAGAGGATGCGA+AGG | 0.634645 | 1_4:-66424139 | Msa0179000:CDS |
TCACAGCAGGCCAATGACAG+TGG | 0.635719 | 1_4:-66422280 | Msa0179000:CDS |
ACAAAGTGTGCTTGGTACTG+TGG | 0.637548 | 1_4:-66427544 | Msa0179000:CDS |
TTATAATCCTGATGCTCCAG+AGG | 0.638161 | 1_4:-66424148 | Msa0179000:CDS |
TGTGACATCATCTTGTCCGG+TGG | 0.646990 | 1_4:+66423885 | None:intergenic |
AAGTTCTTAACATCATCCAA+CGG | 0.647331 | 1_4:+66423856 | None:intergenic |
CCGACATTCATCATGTAAGG+AGG | 0.650409 | 1_4:-66422323 | Msa0179000:CDS |
TCCAAGATGATGATCATCCG+AGG | 0.651348 | 1_4:+66421892 | None:intergenic |
GGCCATGAGGATCAATACAT+GGG | 0.661032 | 1_4:-66424048 | Msa0179000:CDS |
GATGAGGGTTGGTTATGCCC+AGG | 0.661408 | 1_4:-66424634 | Msa0179000:CDS |
AGTATCTTGGATCACAACCT+GGG | 0.671806 | 1_4:-66424201 | Msa0179000:CDS |
ATTTGAGGATCCAGGCCATG+AGG | 0.675316 | 1_4:-66424061 | Msa0179000:CDS |
GAGGATGCGAAGGTTGAAGG+AGG | 0.677573 | 1_4:-66424129 | Msa0179000:CDS |
TGACCGCCAAAATAACTCCA+GGG | 0.677588 | 1_4:-66423194 | Msa0179000:CDS |
AGCCCTGCTTCAGATGTCTG+CGG | 0.678843 | 1_4:+66422052 | None:intergenic |
ATTCCCGCCGTACTGCCAAG+AGG | 0.692868 | 1_4:-66423146 | Msa0179000:CDS |
AACAGAGCTGGTGATACCCG+CGG | 0.701915 | 1_4:+66424780 | None:intergenic |
GACAGCGGAGGTGAAAACAA+AGG | 0.703274 | 1_4:-66422163 | Msa0179000:CDS |
AACCAACCCTCATCGCCAGG+TGG | 0.710395 | 1_4:+66424643 | None:intergenic |
ACTAGCTTTAACGGTAACGG+CGG | 0.716035 | 1_4:+66427958 | None:intergenic |
AACATGGAGAAGGAGAAGAA+CGG | 0.734201 | 1_4:-66428613 | Msa0179000:five_prime_UTR |
TCAAATGCGAGTGAAACATG+GGG | 0.741277 | 1_4:-66427160 | Msa0179000:CDS |
GAAGCAGCGACAGAGCTCTG+CGG | 0.763478 | 1_4:-66427089 | Msa0179000:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAAACTTTTTTTATTCTA+GGG | + | chr1_4:66423726-66423745 | None:intergenic | 10.0% |
!!! | GTATTTTTTTTTTTTTTTTG+TGG | - | chr1_4:66425034-66425053 | Msa0179000:CDS | 10.0% |
!! | CATTAAAGAATAAAATATAA+AGG | + | chr1_4:66425278-66425297 | None:intergenic | 10.0% |
!! | AATAATAAATAAATTAGACT+CGG | + | chr1_4:66426865-66426884 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAACATCATT+TGG | + | chr1_4:66428535-66428554 | None:intergenic | 10.0% |
!! | TTAACATTAACACATTATAT+TGG | + | chr1_4:66422414-66422433 | None:intergenic | 15.0% |
!!! | TTAAACTTTTTTTATTCTAG+GGG | + | chr1_4:66423725-66423744 | None:intergenic | 15.0% |
!!! | CATTAAACTTTTTTTATTCT+AGG | + | chr1_4:66423727-66423746 | None:intergenic | 15.0% |
!!! | TTCTTTTTACTCTAATATTT+TGG | - | chr1_4:66424742-66424761 | Msa0179000:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTTGTGG+TGG | - | chr1_4:66425037-66425056 | Msa0179000:CDS | 15.0% |
!!! | TATCCAATTTTTCAAAATTT+GGG | - | chr1_4:66425301-66425320 | Msa0179000:intron | 15.0% |
!! | ACAAATAATGTTATAAAAAC+AGG | - | chr1_4:66425824-66425843 | Msa0179000:intron | 15.0% |
!! | AATATCTTTAATAACTTATG+AGG | - | chr1_4:66426665-66426684 | Msa0179000:intron | 15.0% |
!! | AATAAAATGAAGAAAAAGAA+AGG | - | chr1_4:66428229-66428248 | Msa0179000:intron | 15.0% |
!! | ATAAAATGAAGAAAAAGAAA+GGG | - | chr1_4:66428230-66428249 | Msa0179000:intron | 15.0% |
!! | AAAAAGTTTAATGTGATCTT+AGG | - | chr1_4:66423734-66423753 | Msa0179000:CDS | 20.0% |
!!! | ACAAACACTTTTATCTTATA+CGG | - | chr1_4:66423917-66423936 | Msa0179000:CDS | 20.0% |
!! | AAGTTTCTCATGTTTATATT+TGG | + | chr1_4:66424235-66424254 | None:intergenic | 20.0% |
!!! | GTATCCAATTTTTCAAAATT+TGG | - | chr1_4:66425300-66425319 | Msa0179000:intron | 20.0% |
!!! | TTCTAAGAAAGAAATCAAAT+AGG | + | chr1_4:66425703-66425722 | None:intergenic | 20.0% |
!! | TATACACTTGAGTATATTTA+GGG | + | chr1_4:66427303-66427322 | None:intergenic | 20.0% |
!! | ATATACACTTGAGTATATTT+AGG | + | chr1_4:66427304-66427323 | None:intergenic | 20.0% |
!! | TTATTCTTATAGTTTACTTG+AGG | - | chr1_4:66427374-66427393 | Msa0179000:CDS | 20.0% |
!!! | TTTTTTTTTCCGTTTAGTTA+TGG | - | chr1_4:66428492-66428511 | Msa0179000:five_prime_UTR | 20.0% |
!! | AAAAAAAAAACATCATTTGG+TGG | + | chr1_4:66428532-66428551 | None:intergenic | 20.0% |
! | AAGAAACGGTAAATTTGAAA+GGG | + | chr1_4:66421853-66421872 | None:intergenic | 25.0% |
! | AAAGAAACGGTAAATTTGAA+AGG | + | chr1_4:66421854-66421873 | None:intergenic | 25.0% |
!! | TTTCTCTATGTTTCTGTTAT+GGG | - | chr1_4:66421966-66421985 | Msa0179000:exon | 25.0% |
! | ATGCAAGTTGTAAACAAAAT+GGG | - | chr1_4:66422006-66422025 | Msa0179000:CDS | 25.0% |
! | ATAATTCAGACATGTAACAA+AGG | + | chr1_4:66422140-66422159 | None:intergenic | 25.0% |
! | TTTACATTGTCATCTTTGTT+GGG | - | chr1_4:66422295-66422314 | Msa0179000:CDS | 25.0% |
! | TAACACATTATATTGGAGTT+TGG | + | chr1_4:66422407-66422426 | None:intergenic | 25.0% |
! | AGAAAGAAAGTCTAAAAACT+TGG | - | chr1_4:66423025-66423044 | Msa0179000:CDS | 25.0% |
! | GAAAGAAAGTCTAAAAACTT+GGG | - | chr1_4:66423026-66423045 | Msa0179000:CDS | 25.0% |
!! | TATCGAAGAAGTATGTATTA+AGG | - | chr1_4:66423090-66423109 | Msa0179000:CDS | 25.0% |
! | ATGAAATGAAGACAAAAGAA+AGG | - | chr1_4:66423210-66423229 | Msa0179000:CDS | 25.0% |
! | AAGAAAAAGACAAGAAAAGA+GGG | - | chr1_4:66423245-66423264 | Msa0179000:CDS | 25.0% |
!!! | GTTAGCTTGTAATCTATATT+TGG | - | chr1_4:66423414-66423433 | Msa0179000:intron | 25.0% |
!! | TGTTTCATTTTCCACATTAA+AGG | - | chr1_4:66423495-66423514 | Msa0179000:intron | 25.0% |
! | ATTGTGATTGTTATCTTGTT+TGG | - | chr1_4:66423634-66423653 | Msa0179000:intron | 25.0% |
!!! | TTGTTTGGAGTCATATTTTT+TGG | - | chr1_4:66423649-66423668 | Msa0179000:intron | 25.0% |
! | TTCTCATAAACAATCATCTA+GGG | + | chr1_4:66423886-66423905 | None:intergenic | 25.0% |
! | ATTCTCATAAACAATCATCT+AGG | + | chr1_4:66423887-66423906 | None:intergenic | 25.0% |
!! | CAAACACTTTTATCTTATAC+GGG | - | chr1_4:66423918-66423937 | Msa0179000:CDS | 25.0% |
!! | TTTAAGAAGTGTACTTATGT+TGG | + | chr1_4:66424025-66424044 | None:intergenic | 25.0% |
! | TCTCATGTTTATATTTGGAA+AGG | + | chr1_4:66424230-66424249 | None:intergenic | 25.0% |
!! | TCTTTAATGATCCATTTTCT+TGG | - | chr1_4:66424427-66424446 | Msa0179000:intron | 25.0% |
!! | CTTTAATGATCCATTTTCTT+GGG | - | chr1_4:66424428-66424447 | Msa0179000:intron | 25.0% |
! | AAAATGACAATAAAACAGAG+GGG | + | chr1_4:66424864-66424883 | None:intergenic | 25.0% |
! | GAAAATGACAATAAAACAGA+GGG | + | chr1_4:66424865-66424884 | None:intergenic | 25.0% |
! | TGAAAATGACAATAAAACAG+AGG | + | chr1_4:66424866-66424885 | None:intergenic | 25.0% |
!! | CTGATGAATTTTGTGATATT+TGG | - | chr1_4:66424905-66424924 | Msa0179000:intron | 25.0% |
!! | ATTGTGAAAATTTTGCAGTA+TGG | - | chr1_4:66425081-66425100 | Msa0179000:CDS | 25.0% |
!!! | ACTCCCAAATTTTGAAAAAT+TGG | + | chr1_4:66425307-66425326 | None:intergenic | 25.0% |
! | AATGATATAATTCTCTGTGA+TGG | - | chr1_4:66425397-66425416 | Msa0179000:intron | 25.0% |
!!! | TGATAAATTACTTTGAAGCA+TGG | + | chr1_4:66425515-66425534 | None:intergenic | 25.0% |
!! | GTTAGTTGGAAAACTTTTTA+AGG | - | chr1_4:66425677-66425696 | Msa0179000:intron | 25.0% |
!! | ATTTAAAACTGAACCTTGTT+TGG | - | chr1_4:66425744-66425763 | Msa0179000:intron | 25.0% |
! | GATGATGTTAAGAACTTTAA+AGG | - | chr1_4:66426359-66426378 | Msa0179000:intron | 25.0% |
! | TAGACCTCATATCAAAAAAA+GGG | + | chr1_4:66426533-66426552 | None:intergenic | 25.0% |
! | TTAGACCTCATATCAAAAAA+AGG | + | chr1_4:66426534-66426553 | None:intergenic | 25.0% |
! | TAACGAAATAGTAAAGAAAC+AGG | + | chr1_4:66426737-66426756 | None:intergenic | 25.0% |
! | TATTAGAGTTCTTTCATACT+TGG | + | chr1_4:66426770-66426789 | None:intergenic | 25.0% |
! | AGAGGAAAAGAACAAAAAAA+AGG | + | chr1_4:66426888-66426907 | None:intergenic | 25.0% |
!! | ATTTTCAACTTTATGCTGAT+GGG | + | chr1_4:66427093-66427112 | None:intergenic | 25.0% |
!! | TATTTTCAACTTTATGCTGA+TGG | + | chr1_4:66427094-66427113 | None:intergenic | 25.0% |
! | TAGTATGCAAATTAGAAACT+TGG | + | chr1_4:66427246-66427265 | None:intergenic | 25.0% |
! | ATACACTTGAGTATATTTAG+GGG | + | chr1_4:66427302-66427321 | None:intergenic | 25.0% |
!!! | AATTGCAGAAGTGATTTTTT+GGG | - | chr1_4:66427333-66427352 | Msa0179000:CDS | 25.0% |
!! | TTTTTACTGCACATAATAAC+TGG | - | chr1_4:66427466-66427485 | Msa0179000:CDS | 25.0% |
! | AAGAAAATCAATATCCAGAA+CGG | - | chr1_4:66427688-66427707 | Msa0179000:exon | 25.0% |
!!! | CTTTTAAAAAGTAGCTATTC+AGG | - | chr1_4:66428390-66428409 | Msa0179000:intron | 25.0% |
!!! | ATTTTTAAGTGTTTGCATGA+GGG | + | chr1_4:66428447-66428466 | None:intergenic | 25.0% |
!!! | TATTTTTAAGTGTTTGCATG+AGG | + | chr1_4:66428448-66428467 | None:intergenic | 25.0% |
! | AACACTTAAAAATAGTTGTC+AGG | - | chr1_4:66428454-66428473 | Msa0179000:five_prime_UTR | 25.0% |
! | TAATGTGAGCATCATTTATA+TGG | - | chr1_4:66428633-66428652 | Msa0179000:five_prime_UTR | 25.0% |
AATCTATGGAACGAAAGAAA+CGG | + | chr1_4:66421867-66421886 | None:intergenic | 30.0% | |
! | GTTTCTCTATGTTTCTGTTA+TGG | - | chr1_4:66421965-66421984 | Msa0179000:exon | 30.0% |
! | TTCTCTATGTTTCTGTTATG+GGG | - | chr1_4:66421967-66421986 | Msa0179000:exon | 30.0% |
CATGCAAGTTGTAAACAAAA+TGG | - | chr1_4:66422005-66422024 | Msa0179000:CDS | 30.0% | |
! | ACTACTTGATAATTAGCTTG+CGG | - | chr1_4:66422040-66422059 | Msa0179000:CDS | 30.0% |
!! | TCTTTTGCTTACTTTGTTGT+TGG | - | chr1_4:66422159-66422178 | Msa0179000:CDS | 30.0% |
CTTTACATTGTCATCTTTGT+TGG | - | chr1_4:66422294-66422313 | Msa0179000:CDS | 30.0% | |
TTGAACTAATCATTAGTCCA+AGG | + | chr1_4:66422536-66422555 | None:intergenic | 30.0% | |
TCTGAAAAAACAGTTCAGAT+TGG | - | chr1_4:66422621-66422640 | Msa0179000:intron | 30.0% | |
CTGAAAAAACAGTTCAGATT+GGG | - | chr1_4:66422622-66422641 | Msa0179000:intron | 30.0% | |
! | TTTTTCATCGATAGCAGAAT+CGG | + | chr1_4:66422694-66422713 | None:intergenic | 30.0% |
! | GAATTTGATTTCACTTGAAC+AGG | + | chr1_4:66422822-66422841 | None:intergenic | 30.0% |
AAGTATGTATTAAGGTCGTT+AGG | - | chr1_4:66423098-66423117 | Msa0179000:CDS | 30.0% | |
ACATCAGTAACAGTATCAAT+CGG | + | chr1_4:66423182-66423201 | None:intergenic | 30.0% | |
AAATGAAGACAAAAGAAAGG+AGG | - | chr1_4:66423213-66423232 | Msa0179000:CDS | 30.0% | |
GAAGAAAAAGACAAGAAAAG+AGG | - | chr1_4:66423244-66423263 | Msa0179000:CDS | 30.0% | |
! | AGTTTTGCTCATAGCTTATT+CGG | + | chr1_4:66423322-66423341 | None:intergenic | 30.0% |
AACTTGATTGATGCTTATTC+TGG | - | chr1_4:66423338-66423357 | Msa0179000:intron | 30.0% | |
CTAACGAAATCACAAAGTAA+TGG | + | chr1_4:66423399-66423418 | None:intergenic | 30.0% | |
GCTAAGGTCAAAAATAAATC+AGG | + | chr1_4:66423448-66423467 | None:intergenic | 30.0% | |
!! | TATTTTTGACCTTAGCTCAT+TGG | - | chr1_4:66423452-66423471 | Msa0179000:intron | 30.0% |
! | ATTTTTGACCTTAGCTCATT+GGG | - | chr1_4:66423453-66423472 | Msa0179000:intron | 30.0% |
TGATGTTAACTCCTTTAATG+TGG | + | chr1_4:66423509-66423528 | None:intergenic | 30.0% | |
GGAGTTAACATCAATTCTAT+TGG | - | chr1_4:66423516-66423535 | Msa0179000:intron | 30.0% | |
GCAATCATTCAACTTGTAAA+AGG | + | chr1_4:66423588-66423607 | None:intergenic | 30.0% | |
GTGATCTTAGGTATTTGAAT+TGG | - | chr1_4:66423746-66423765 | Msa0179000:CDS | 30.0% | |
! | GGATACTATACTGGTTATTT+AGG | + | chr1_4:66423864-66423883 | None:intergenic | 30.0% |
TCTCATAAACAATCATCTAG+GGG | + | chr1_4:66423885-66423904 | None:intergenic | 30.0% | |
!!! | TGTGCTTTTTCAAATCACTT+TGG | - | chr1_4:66423941-66423960 | Msa0179000:CDS | 30.0% |
ATATGTAAGCTAGCACAATT+AGG | - | chr1_4:66424088-66424107 | Msa0179000:CDS | 30.0% | |
! | TTCAAATGAACCTTGCTATA+TGG | + | chr1_4:66424159-66424178 | None:intergenic | 30.0% |
AGTAAAGGTAAATCCAAACA+TGG | + | chr1_4:66424322-66424341 | None:intergenic | 30.0% | |
ATTTACCTTTACTGACCATT+TGG | - | chr1_4:66424329-66424348 | Msa0179000:intron | 30.0% | |
AAAATCCAAATGGTCAGTAA+AGG | + | chr1_4:66424337-66424356 | None:intergenic | 30.0% | |
CAGCTAAGATAAAATCCAAA+TGG | + | chr1_4:66424347-66424366 | None:intergenic | 30.0% | |
! | TACAAAATTGCATTTGGTGA+TGG | + | chr1_4:66424393-66424412 | None:intergenic | 30.0% |
! | ATCACCAAATGCAATTTTGT+AGG | - | chr1_4:66424392-66424411 | Msa0179000:intron | 30.0% |
GAATCCTACAAAATTGCATT+TGG | + | chr1_4:66424399-66424418 | None:intergenic | 30.0% | |
TTAAATGGATCCCAAGAAAA+TGG | + | chr1_4:66424441-66424460 | None:intergenic | 30.0% | |
TTAAGCCAATTTGGTAAAAC+GGG | + | chr1_4:66424510-66424529 | None:intergenic | 30.0% | |
CTTAAGCCAATTTGGTAAAA+CGG | + | chr1_4:66424511-66424530 | None:intergenic | 30.0% | |
TCAATCCTGTAGTAAGATTT+GGG | + | chr1_4:66424555-66424574 | None:intergenic | 30.0% | |
TTCAATCCTGTAGTAAGATT+TGG | + | chr1_4:66424556-66424575 | None:intergenic | 30.0% | |
CGCAGTATAAAAACTATACA+TGG | + | chr1_4:66424789-66424808 | None:intergenic | 30.0% | |
CAGGGATCTATTTCAAAATT+TGG | - | chr1_4:66425171-66425190 | Msa0179000:intron | 30.0% | |
TCAGAATCAAACAAAGATTC+AGG | + | chr1_4:66425223-66425242 | None:intergenic | 30.0% | |
! | TGAATCTTTGTTTGATTCTG+AGG | - | chr1_4:66425222-66425241 | Msa0179000:intron | 30.0% |
! | GAATCTTTGTTTGATTCTGA+GGG | - | chr1_4:66425223-66425242 | Msa0179000:intron | 30.0% |
ATTATTAGTAGCCAACACTT+TGG | + | chr1_4:66425380-66425399 | None:intergenic | 30.0% | |
TTACTGTCTTCAGTTAACAA+TGG | + | chr1_4:66425463-66425482 | None:intergenic | 30.0% | |
TAACTGAAGACAGTAATATC+TGG | - | chr1_4:66425467-66425486 | Msa0179000:intron | 30.0% | |
!! | AACTTGTTAACGACTTGTTA+GGG | - | chr1_4:66425624-66425643 | Msa0179000:intron | 30.0% |
CAAAACAAGTAAACCAAACA+AGG | + | chr1_4:66425760-66425779 | None:intergenic | 30.0% | |
AAGTTCTTAACATCATCCAA+CGG | + | chr1_4:66426356-66426375 | None:intergenic | 30.0% | |
!!! | AAGTCCCTTTTTTTGATATG+AGG | - | chr1_4:66426526-66426545 | Msa0179000:intron | 30.0% |
ATATTCTAACTGTATCAGAG+TGG | - | chr1_4:66426697-66426716 | Msa0179000:intron | 30.0% | |
AGTTCATACTGTTGGAAAAA+TGG | + | chr1_4:66426822-66426841 | None:intergenic | 30.0% | |
! | ACACAGCTGTCTAAAATATT+GGG | + | chr1_4:66426911-66426930 | None:intergenic | 30.0% |
! | AACACAGCTGTCTAAAATAT+TGG | + | chr1_4:66426912-66426931 | None:intergenic | 30.0% |
! | ATACTAGTGATGATGAAGAT+TGG | - | chr1_4:66426958-66426977 | Msa0179000:CDS | 30.0% |
! | TACTAGTGATGATGAAGATT+GGG | - | chr1_4:66426959-66426978 | Msa0179000:CDS | 30.0% |
!!! | GTCAGTTTCTTTTTTCTACT+TGG | + | chr1_4:66426999-66427018 | None:intergenic | 30.0% |
GGATCTTCATACAATAAACT+TGG | - | chr1_4:66427170-66427189 | Msa0179000:CDS | 30.0% | |
! | GTGATTGTTAAGTTCTGTTT+TGG | - | chr1_4:66427209-66427228 | Msa0179000:CDS | 30.0% |
TGCATACTAATATTCCCTTT+CGG | - | chr1_4:66427257-66427276 | Msa0179000:CDS | 30.0% | |
AATTGAATGATAGACCGAAA+GGG | + | chr1_4:66427274-66427293 | None:intergenic | 30.0% | |
AAATTGAATGATAGACCGAA+AGG | + | chr1_4:66427275-66427294 | None:intergenic | 30.0% | |
!!! | GAATTGCAGAAGTGATTTTT+TGG | - | chr1_4:66427332-66427351 | Msa0179000:CDS | 30.0% |
!!! | ATTGCAGAAGTGATTTTTTG+GGG | - | chr1_4:66427334-66427353 | Msa0179000:CDS | 30.0% |
TATAGTTTACTTGAGGTAGA+AGG | - | chr1_4:66427381-66427400 | Msa0179000:CDS | 30.0% | |
ATAACTGTTATTCCTGCAAA+AGG | + | chr1_4:66427493-66427512 | None:intergenic | 30.0% | |
TTTCTCTCTTTCCATTCAAA+AGG | - | chr1_4:66427560-66427579 | Msa0179000:CDS | 30.0% | |
TTTCCATTCAAAAGGAGATT+AGG | - | chr1_4:66427568-66427587 | Msa0179000:CDS | 30.0% | |
ATACAAGAATAGTCACTCTA+AGG | + | chr1_4:66427643-66427662 | None:intergenic | 30.0% | |
!!! | TGTTTTTAGCATTGCTCTTA+TGG | - | chr1_4:66427769-66427788 | Msa0179000:intron | 30.0% |
AACCATTTGTCAACCTATAA+GGG | + | chr1_4:66427845-66427864 | None:intergenic | 30.0% | |
AAACCATTTGTCAACCTATA+AGG | + | chr1_4:66427846-66427865 | None:intergenic | 30.0% | |
! | TTATAGGTTGACAAATGGTT+TGG | - | chr1_4:66427845-66427864 | Msa0179000:intron | 30.0% |
AGCTGAAAATAAAGGAGATA+GGG | - | chr1_4:66427952-66427971 | Msa0179000:five_prime_UTR | 30.0% | |
! | GACTTAATTTCCTTTTCGTA+AGG | - | chr1_4:66428257-66428276 | Msa0179000:intron | 30.0% |
!!! | TTTTTAAGTGTTTGCATGAG+GGG | + | chr1_4:66428446-66428465 | None:intergenic | 30.0% |
ATAAGGTCTCCATAACTAAA+CGG | + | chr1_4:66428504-66428523 | None:intergenic | 30.0% | |
! | ATCATTTGGTGGAAACAATA+AGG | + | chr1_4:66428521-66428540 | None:intergenic | 30.0% |
GAAGCTTGAGATACTAAAAA+AGG | + | chr1_4:66428558-66428577 | None:intergenic | 30.0% | |
! | TTTATATGGATGCGGATTAA+AGG | - | chr1_4:66428647-66428666 | Msa0179000:five_prime_UTR | 30.0% |
ATACATACTCCTCCAAATCT+GGG | + | chr1_4:66421625-66421644 | None:intergenic | 35.0% | |
TATACATACTCCTCCAAATC+TGG | + | chr1_4:66421626-66421645 | None:intergenic | 35.0% | |
AGGAATATGAAGATGAAGGA+AGG | + | chr1_4:66421753-66421772 | None:intergenic | 35.0% | |
AATTTGAAAGGGAAAGGGAA+AGG | + | chr1_4:66421842-66421861 | None:intergenic | 35.0% | |
CGGTAAATTTGAAAGGGAAA+GGG | + | chr1_4:66421847-66421866 | None:intergenic | 35.0% | |
ACGGTAAATTTGAAAGGGAA+AGG | + | chr1_4:66421848-66421867 | None:intergenic | 35.0% | |
!! | ACAACTAGCTTTAACGGTAA+CGG | + | chr1_4:66422257-66422276 | None:intergenic | 35.0% |
GTAGTTCTTAGACTTACGAA+AGG | - | chr1_4:66422475-66422494 | Msa0179000:CDS | 35.0% | |
! | GGACTAATGATTAGTTCAAC+TGG | - | chr1_4:66422537-66422556 | Msa0179000:CDS | 35.0% |
TTCTCAGTCGTAAAATCGTT+GGG | + | chr1_4:66422576-66422595 | None:intergenic | 35.0% | |
! | GATTTTACGACTGAGAAGAT+AGG | - | chr1_4:66422579-66422598 | Msa0179000:intron | 35.0% |
AATTCTGTTATTCAACTGCC+TGG | - | chr1_4:66422744-66422763 | Msa0179000:intron | 35.0% | |
TTGTGGTTGTTCTTCAACAA+GGG | + | chr1_4:66422793-66422812 | None:intergenic | 35.0% | |
TGATTTCACTTGAACAGGAA+CGG | + | chr1_4:66422817-66422836 | None:intergenic | 35.0% | |
AAATTCTGTGAATGAGCTAC+TGG | - | chr1_4:66422836-66422855 | Msa0179000:intron | 35.0% | |
! | ATTAGTTCTCAAAACGAACC+TGG | - | chr1_4:66422888-66422907 | Msa0179000:intron | 35.0% |
! | ATTGTGTTTGGTCTTCAACA+AGG | + | chr1_4:66422938-66422957 | None:intergenic | 35.0% |
CAAGTGAAAACAGAATCTTC+TGG | - | chr1_4:66422969-66422988 | Msa0179000:intron | 35.0% | |
AGTAATATCTCAGTTGAGCT+CGG | + | chr1_4:66423295-66423314 | None:intergenic | 35.0% | |
ATTGATGCTTATTCTGGTGA+GGG | - | chr1_4:66423344-66423363 | Msa0179000:intron | 35.0% | |
TAAATTCTCCCAATGAGCTA+AGG | + | chr1_4:66423464-66423483 | None:intergenic | 35.0% | |
TAATTGCTTGCCAACTGAAA+TGG | - | chr1_4:66423540-66423559 | Msa0179000:intron | 35.0% | |
AGATGTAGTTCCATTTCAGT+TGG | + | chr1_4:66423553-66423572 | None:intergenic | 35.0% | |
AACTGAAATGGAACTACATC+TGG | - | chr1_4:66423552-66423571 | Msa0179000:intron | 35.0% | |
! | GAACTACATCTGGAATATTC+TGG | - | chr1_4:66423562-66423581 | Msa0179000:intron | 35.0% |
TCACAATATTCCAACACATG+CGG | + | chr1_4:66423621-66423640 | None:intergenic | 35.0% | |
TCTAGTACATGATCAGAACA+TGG | + | chr1_4:66423688-66423707 | None:intergenic | 35.0% | |
AGGTTCATTTGAATTTGACG+TGG | - | chr1_4:66424166-66424185 | Msa0179000:CDS | 35.0% | |
TTCTTGGGATCCATTTAATC+TGG | - | chr1_4:66424443-66424462 | Msa0179000:intron | 35.0% | |
!! | CGTTTTACCAAATTGGCTTA+AGG | - | chr1_4:66424509-66424528 | Msa0179000:intron | 35.0% |
AATTTCGCCTTAAGCCAATT+TGG | + | chr1_4:66424519-66424538 | None:intergenic | 35.0% | |
CAATCCTGTAGTAAGATTTG+GGG | + | chr1_4:66424554-66424573 | None:intergenic | 35.0% | |
AAATAAGATGTGGCATACAC+GGG | + | chr1_4:66424615-66424634 | None:intergenic | 35.0% | |
CAAATAAGATGTGGCATACA+CGG | + | chr1_4:66424616-66424635 | None:intergenic | 35.0% | |
CGAACAACACAAATAAGATG+TGG | + | chr1_4:66424625-66424644 | None:intergenic | 35.0% | |
! | TTTGTGCCACATCTTATTTG+TGG | - | chr1_4:66424708-66424727 | Msa0179000:intron | 35.0% |
TGAATGCCACAAATAAGATG+TGG | + | chr1_4:66424717-66424736 | None:intergenic | 35.0% | |
AATAAAACAGAGGGGAAGAA+TGG | + | chr1_4:66424856-66424875 | None:intergenic | 35.0% | |
GGAAAAATTAAAGCCAGAGA+AGG | - | chr1_4:66425102-66425121 | Msa0179000:CDS | 35.0% | |
! | TAATTTGCGTCGCAGAATTT+CGG | + | chr1_4:66425146-66425165 | None:intergenic | 35.0% |
TGCGACGCAAATTAAAAATC+AGG | - | chr1_4:66425152-66425171 | Msa0179000:intron | 35.0% | |
GCGACGCAAATTAAAAATCA+GGG | - | chr1_4:66425153-66425172 | Msa0179000:intron | 35.0% | |
GGAGTGATCAATTAATCAAG+TGG | + | chr1_4:66425494-66425513 | None:intergenic | 35.0% | |
!! | GAACTTGTTAACGACTTGTT+AGG | - | chr1_4:66425623-66425642 | Msa0179000:intron | 35.0% |
GATAAGTCACATAATCAGGA+GGG | + | chr1_4:66425946-66425965 | None:intergenic | 35.0% | |
CAAGGATAAGTCACATAATC+AGG | + | chr1_4:66425950-66425969 | None:intergenic | 35.0% | |
! | ATCTGCTTCTGAGAAATTTG+AGG | - | chr1_4:66426133-66426152 | Msa0179000:intron | 35.0% |
ATTAAGGATAACATGTCCAC+CGG | - | chr1_4:66426308-66426327 | Msa0179000:intron | 35.0% | |
TGCTAAAGATGACAGTTCAT+CGG | + | chr1_4:66426420-66426439 | None:intergenic | 35.0% | |
! | ACATTTCTTTTCCCAGAAAC+CGG | + | chr1_4:66426473-66426492 | None:intergenic | 35.0% |
CTGGGAAAAGAAATGTTGAA+AGG | - | chr1_4:66426477-66426496 | Msa0179000:intron | 35.0% | |
GAAAAGAAATGTTGAAAGGC+TGG | - | chr1_4:66426481-66426500 | Msa0179000:intron | 35.0% | |
! | GACTTACTTCATACAGCTTT+TGG | + | chr1_4:66426511-66426530 | None:intergenic | 35.0% |
ATGCTGTAAGTTGTATGTGT+TGG | - | chr1_4:66426633-66426652 | Msa0179000:intron | 35.0% | |
! | TAGTCTTGAGTTCATACTGT+TGG | + | chr1_4:66426830-66426849 | None:intergenic | 35.0% |
TGAACTCAAGACTACATTAG+TGG | - | chr1_4:66426836-66426855 | Msa0179000:intron | 35.0% | |
GAACTCAAGACTACATTAGT+GGG | - | chr1_4:66426837-66426856 | Msa0179000:intron | 35.0% | |
CATCATCACTAGTATCACTA+TGG | + | chr1_4:66426953-66426972 | None:intergenic | 35.0% | |
! | TTATTTGAGGCGTTTCCATT+TGG | + | chr1_4:66427044-66427063 | None:intergenic | 35.0% |
!!! | TTGCAGAAGTGATTTTTTGG+GGG | - | chr1_4:66427335-66427354 | Msa0179000:CDS | 35.0% |
! | ATAATAACTGGTCCTTTTGC+AGG | - | chr1_4:66427478-66427497 | Msa0179000:CDS | 35.0% |
AGTGTTTGTGCAGTAAATCA+GGG | + | chr1_4:66427519-66427538 | None:intergenic | 35.0% | |
AATGGTTAACTCAGAGTCAT+GGG | + | chr1_4:66427815-66427834 | None:intergenic | 35.0% | |
! | ACCATTCTTTTCTCCCTTAT+AGG | - | chr1_4:66427829-66427848 | Msa0179000:intron | 35.0% |
ACCTATAAGGGAGAAAAGAA+TGG | + | chr1_4:66427833-66427852 | None:intergenic | 35.0% | |
GAGCTGAAAATAAAGGAGAT+AGG | - | chr1_4:66427951-66427970 | Msa0179000:five_prime_UTR | 35.0% | |
GCTGAAAATAAAGGAGATAG+GGG | - | chr1_4:66428001-66428020 | Msa0179000:five_prime_UTR | 35.0% | |
AATCAAAGATTGAGCCGTTA+TGG | + | chr1_4:66428186-66428205 | None:intergenic | 35.0% | |
CTCAATCTTTGATTGCTTAC+CGG | - | chr1_4:66428192-66428211 | Msa0179000:intron | 35.0% | |
AATCTTGCTACCTTACGAAA+AGG | + | chr1_4:66428270-66428289 | None:intergenic | 35.0% | |
TGGATCTCAAACGATATTCT+TGG | - | chr1_4:66428336-66428355 | Msa0179000:intron | 35.0% | |
ATCTCAAACGATATTCTTGG+AGG | - | chr1_4:66428339-66428358 | Msa0179000:intron | 35.0% | |
TTGTTAATAGTGATGCGACA+TGG | + | chr1_4:66428600-66428619 | None:intergenic | 35.0% | |
GAGCATCATTTATATGGATG+CGG | - | chr1_4:66428639-66428658 | Msa0179000:five_prime_UTR | 35.0% | |
TCTTCTCCTTCTCCATGTTA+GGG | + | chr1_4:66421595-66421614 | None:intergenic | 40.0% | |
TTCTTCTCCTTCTCCATGTT+AGG | + | chr1_4:66421596-66421615 | None:intergenic | 40.0% | |
AACATGGAGAAGGAGAAGAA+CGG | - | chr1_4:66421596-66421615 | Msa0179000:three_prime_UTR | 40.0% | |
AGGTTCGATCTAACGTGAAA+CGG | + | chr1_4:66421733-66421752 | None:intergenic | 40.0% | |
TTCATCTTCATATTCCTCGC+CGG | - | chr1_4:66421756-66421775 | Msa0179000:three_prime_UTR | 40.0% | |
AGGAAGTGGTGTGAAAGAAA+AGG | + | chr1_4:66421822-66421841 | None:intergenic | 40.0% | |
AGAGAAGCAGAAGGAATCTA+TGG | + | chr1_4:66421881-66421900 | None:intergenic | 40.0% | |
GCAAGAAAAAGAGAAGCAGA+AGG | + | chr1_4:66421890-66421909 | None:intergenic | 40.0% | |
!! | CCAGGTACAACTAGCTTTAA+CGG | + | chr1_4:66422263-66422282 | None:intergenic | 40.0% |
TGTAAAGAACAAAGCTCACC+AGG | + | chr1_4:66422281-66422300 | None:intergenic | 40.0% | |
CTTAGACTTACGAAAGGCTT+TGG | - | chr1_4:66422481-66422500 | Msa0179000:CDS | 40.0% | |
TTGTGTGATGTGTGTTTCCT+TGG | - | chr1_4:66422516-66422535 | Msa0179000:CDS | 40.0% | |
CTTCTCAGTCGTAAAATCGT+TGG | + | chr1_4:66422577-66422596 | None:intergenic | 40.0% | |
GTTGTGGTTGTTCTTCAACA+AGG | + | chr1_4:66422794-66422813 | None:intergenic | 40.0% | |
GATTTCACTTGAACAGGAAC+GGG | + | chr1_4:66422816-66422835 | None:intergenic | 40.0% | |
! | TTTTTCGCAACATCTCCAGA+AGG | + | chr1_4:66422867-66422886 | None:intergenic | 40.0% |
! | GATTCTGTTTTCACTTGAGC+AGG | + | chr1_4:66422966-66422985 | None:intergenic | 40.0% |
GTCAAATGCGAGTGAAACAT+GGG | - | chr1_4:66423048-66423067 | Msa0179000:CDS | 40.0% | |
TCAAATGCGAGTGAAACATG+GGG | - | chr1_4:66423049-66423068 | Msa0179000:CDS | 40.0% | |
! | TCAATCGGTTCAGGATCTTT+AGG | + | chr1_4:66423167-66423186 | None:intergenic | 40.0% |
! | GTAACAGTATCAATCGGTTC+AGG | + | chr1_4:66423176-66423195 | None:intergenic | 40.0% |
GATTGATGCTTATTCTGGTG+AGG | - | chr1_4:66423343-66423362 | Msa0179000:intron | 40.0% | |
CTCATTGGGAGAATTTAGAG+CGG | - | chr1_4:66423467-66423486 | Msa0179000:intron | 40.0% | |
AAGTCTATAACCGCATGTGT+TGG | - | chr1_4:66423608-66423627 | Msa0179000:intron | 40.0% | |
AGTACACGAGAACAAATTCG+TGG | - | chr1_4:66423779-66423798 | Msa0179000:CDS | 40.0% | |
GTACACGAGAACAAATTCGT+GGG | - | chr1_4:66423780-66423799 | Msa0179000:CDS | 40.0% | |
TCATCTAGGGGATACTATAC+TGG | + | chr1_4:66423873-66423892 | None:intergenic | 40.0% | |
!! | TCAAATCACTTTGGCTTGCA+TGG | - | chr1_4:66423950-66423969 | Msa0179000:CDS | 40.0% |
TCAAACGGTGAGTGTATACA+TGG | - | chr1_4:66423991-66424010 | Msa0179000:CDS | 40.0% | |
CAAACGGTGAGTGTATACAT+GGG | - | chr1_4:66423992-66424011 | Msa0179000:CDS | 40.0% | |
AAACGGTGAGTGTATACATG+GGG | - | chr1_4:66423993-66424012 | Msa0179000:CDS | 40.0% | |
AACTCTCGTACCATATAGCA+AGG | - | chr1_4:66424146-66424165 | Msa0179000:CDS | 40.0% | |
! | AGAATGCATCGATCCATGTT+TGG | - | chr1_4:66424306-66424325 | Msa0179000:intron | 40.0% |
CAACAAGGGACCAGATTAAA+TGG | + | chr1_4:66424456-66424475 | None:intergenic | 40.0% | |
GGCAAAAGGTAAGACAACAA+GGG | + | chr1_4:66424470-66424489 | None:intergenic | 40.0% | |
TGGCAAAAGGTAAGACAACA+AGG | + | chr1_4:66424471-66424490 | None:intergenic | 40.0% | |
GGCTCAGATTAAATGGCAAA+AGG | + | chr1_4:66424484-66424503 | None:intergenic | 40.0% | |
TTGGATTCGTTATGTGCTGA+AGG | - | chr1_4:66425190-66425209 | Msa0179000:intron | 40.0% | |
ATTCGTTATGTGCTGAAGGA+AGG | - | chr1_4:66425194-66425213 | Msa0179000:intron | 40.0% | |
AAAATGCCAGACCAAAGTGT+TGG | - | chr1_4:66425366-66425385 | Msa0179000:intron | 40.0% | |
CTGTCTTCAGTTAACAATGG+AGG | + | chr1_4:66425460-66425479 | None:intergenic | 40.0% | |
CATCTTTGCAATCACATCCT+GGG | + | chr1_4:66425595-66425614 | None:intergenic | 40.0% | |
TCATCTTTGCAATCACATCC+TGG | + | chr1_4:66425596-66425615 | None:intergenic | 40.0% | |
!! | TCTCTCTCTTACTGATTCCT+GGG | - | chr1_4:66425652-66425671 | Msa0179000:intron | 40.0% |
GGATAAGTCACATAATCAGG+AGG | + | chr1_4:66425947-66425966 | None:intergenic | 40.0% | |
TGTGACTTATCCTTGTTCAG+AGG | - | chr1_4:66425955-66425974 | Msa0179000:intron | 40.0% | |
GTGACTTATCCTTGTTCAGA+GGG | - | chr1_4:66425956-66425975 | Msa0179000:intron | 40.0% | |
AAGTATCTTGGATCACAACC+TGG | - | chr1_4:66426007-66426026 | Msa0179000:intron | 40.0% | |
AGTATCTTGGATCACAACCT+GGG | - | chr1_4:66426008-66426027 | Msa0179000:intron | 40.0% | |
TCATCGTCAGAATCATCTGA+AGG | + | chr1_4:66426038-66426057 | None:intergenic | 40.0% | |
TTATAATCCTGATGCTCCAG+AGG | - | chr1_4:66426061-66426080 | Msa0179000:intron | 40.0% | |
TCTGAGAAATTTGAGGATCC+AGG | - | chr1_4:66426140-66426159 | Msa0179000:intron | 40.0% | |
TCAATACATGGGTCTTCCTT+CGG | - | chr1_4:66426172-66426191 | Msa0179000:intron | 40.0% | |
GTATCTTTAGCACCAGGATT+GGG | + | chr1_4:66426233-66426252 | None:intergenic | 40.0% | |
AGTATCTTTAGCACCAGGAT+TGG | + | chr1_4:66426234-66426253 | None:intergenic | 40.0% | |
TCTTCAGTATCTTTAGCACC+AGG | + | chr1_4:66426239-66426258 | None:intergenic | 40.0% | |
CTCAGAGTCAGATGTGAAAT+CGG | + | chr1_4:66426273-66426292 | None:intergenic | 40.0% | |
GGATCTTGCTGCTACAATTA+AGG | - | chr1_4:66426292-66426311 | Msa0179000:intron | 40.0% | |
AGATGTGACATCATCTTGTC+CGG | + | chr1_4:66426330-66426349 | None:intergenic | 40.0% | |
CGGTTATAGATGGCTTCTTA+CGG | + | chr1_4:66426400-66426419 | None:intergenic | 40.0% | |
! | GACAGTTCATCGGTTATAGA+TGG | + | chr1_4:66426410-66426429 | None:intergenic | 40.0% |
AAATCCTCTTCACCAAGATC+TGG | + | chr1_4:66426446-66426465 | None:intergenic | 40.0% | |
GTACTCCGATCTTATATGCA+TGG | - | chr1_4:66426560-66426579 | Msa0179000:intron | 40.0% | |
GCAGACCATGCATATAAGAT+CGG | + | chr1_4:66426568-66426587 | None:intergenic | 40.0% | |
! | GCTGTCTAAAATATTGGGAG+AGG | + | chr1_4:66426906-66426925 | None:intergenic | 40.0% |
TATGGTATGTCTCCTGCAAT+AGG | + | chr1_4:66426935-66426954 | None:intergenic | 40.0% | |
!!! | CATCCTTCAAGTGTTTTGGT+GGG | + | chr1_4:66427128-66427147 | None:intergenic | 40.0% |
CAAAACACTTGAAGGATGCA+CGG | - | chr1_4:66427130-66427149 | Msa0179000:CDS | 40.0% | |
ACGGAATCTGGTAAAAAACG+TGG | - | chr1_4:66427149-66427168 | Msa0179000:CDS | 40.0% | |
!!! | TGCAGAAGTGATTTTTTGGG+GGG | - | chr1_4:66427336-66427355 | Msa0179000:CDS | 40.0% |
GAGTGTTTGTGCAGTAAATC+AGG | + | chr1_4:66427520-66427539 | None:intergenic | 40.0% | |
! | GTGCCTAATCTCCTTTTGAA+TGG | + | chr1_4:66427574-66427593 | None:intergenic | 40.0% |
CTCAACATGCATGCAAGTAT+GGG | + | chr1_4:66427604-66427623 | None:intergenic | 40.0% | |
TTGCATGCATGTTGAGGTAA+AGG | - | chr1_4:66427608-66427627 | Msa0179000:CDS | 40.0% | |
TGCATGCATGTTGAGGTAAA+GGG | - | chr1_4:66427609-66427628 | Msa0179000:CDS | 40.0% | |
GAATGGTTAACTCAGAGTCA+TGG | + | chr1_4:66427816-66427835 | None:intergenic | 40.0% | |
! | CTCCCTTATAGGTTGACAAA+TGG | - | chr1_4:66427840-66427859 | Msa0179000:intron | 40.0% |
! | AATGGTTTGGCAATTCTCGT+TGG | - | chr1_4:66427858-66427877 | Msa0179000:intron | 40.0% |
GTTCCGACATTCATCATGTA+AGG | - | chr1_4:66427883-66427902 | Msa0179000:intron | 40.0% | |
CCTCCTTACATGATGAATGT+CGG | + | chr1_4:66427889-66427908 | None:intergenic | 40.0% | |
! | ATTTTCAGCTCCACTGTCAT+TGG | + | chr1_4:66427942-66427961 | None:intergenic | 40.0% |
GACAGTGGAGCTGAAAATAA+AGG | - | chr1_4:66427944-66427963 | Msa0179000:intron | 40.0% | |
GAAAGCGGAGCTGAAAATAA+AGG | - | chr1_4:66427992-66428011 | Msa0179000:five_prime_UTR | 40.0% | |
AGGTGAAAACAAAGGAGAGA+CGG | - | chr1_4:66428054-66428073 | Msa0179000:intron | 40.0% | |
! | TAGTTGTCAGGTAGCAGTTT+TGG | - | chr1_4:66428466-66428485 | Msa0179000:five_prime_UTR | 40.0% |
AACAACGCAAAGCCCTAACA+TGG | - | chr1_4:66421580-66421599 | Msa0179000:three_prime_UTR | 45.0% | |
!!! | GCACCGCTTTTTTCTCACAT+TGG | - | chr1_4:66421652-66421671 | Msa0179000:three_prime_UTR | 45.0% |
GCGCCAATGTGAGAAAAAAG+CGG | + | chr1_4:66421658-66421677 | None:intergenic | 45.0% | |
AACGGTGAGAGAGAAAGAGA+GGG | + | chr1_4:66421715-66421734 | None:intergenic | 45.0% | |
AAACGGTGAGAGAGAAAGAG+AGG | + | chr1_4:66421716-66421735 | None:intergenic | 45.0% | |
GGCGAGGAATATGAAGATGA+AGG | + | chr1_4:66421757-66421776 | None:intergenic | 45.0% | |
GTGACATAGTAATCTCCGTC+CGG | + | chr1_4:66421778-66421797 | None:intergenic | 45.0% | |
AAAGGGAAAGGGAAAGGAAG+TGG | + | chr1_4:66421836-66421855 | None:intergenic | 45.0% | |
! | GTGAGAAGCACGAACTAAGA+CGG | + | chr1_4:66421944-66421963 | None:intergenic | 45.0% |
!! | ACTAGCTTTAACGGTAACGG+CGG | + | chr1_4:66422254-66422273 | None:intergenic | 45.0% |
CCGTTAAAGCTAGTTGTACC+TGG | - | chr1_4:66422260-66422279 | Msa0179000:CDS | 45.0% | |
! | AGACTTACGAAAGGCTTTGG+TGG | - | chr1_4:66422484-66422503 | Msa0179000:CDS | 45.0% |
GACAGAGAACAAAGTGTGCT+TGG | - | chr1_4:66422657-66422676 | Msa0179000:intron | 45.0% | |
ACAAAGTGTGCTTGGTACTG+TGG | - | chr1_4:66422665-66422684 | Msa0179000:intron | 45.0% | |
GAAACGAGTGATGCAGTTAC+TGG | - | chr1_4:66422912-66422931 | Msa0179000:intron | 45.0% | |
GAGCAGGAACAGATTGTGTT+TGG | + | chr1_4:66422950-66422969 | None:intergenic | 45.0% | |
GGTCAAATGCGAGTGAAACA+TGG | - | chr1_4:66423047-66423066 | Msa0179000:CDS | 45.0% | |
ATCTCCACTGGTGTGTCAAA+CGG | - | chr1_4:66423976-66423995 | Msa0179000:CDS | 45.0% | |
AGACAGGTACACGGAAAGTA+AGG | + | chr1_4:66424271-66424290 | None:intergenic | 45.0% | |
CGATACTGAAGACAGGTACA+CGG | + | chr1_4:66424280-66424299 | None:intergenic | 45.0% | |
TTCAGCTCGATACTGAAGAC+AGG | + | chr1_4:66424287-66424306 | None:intergenic | 45.0% | |
CCAATTTGGTAAAACGGGTC+TGG | + | chr1_4:66424505-66424524 | None:intergenic | 45.0% | |
! | CCAGACCCGTTTTACCAAAT+TGG | - | chr1_4:66424502-66424521 | Msa0179000:intron | 45.0% |
AGCACCCCAAATCTTACTAC+AGG | - | chr1_4:66424547-66424566 | Msa0179000:intron | 45.0% | |
GATGTGGCACAAACACTGAA+TGG | + | chr1_4:66424701-66424720 | None:intergenic | 45.0% | |
AGCCAGAGAAGGAGATTCAA+CGG | - | chr1_4:66425113-66425132 | Msa0179000:CDS | 45.0% | |
!! | GAGATTGATAGCGAGGATGT+AGG | - | chr1_4:66425247-66425266 | Msa0179000:intron | 45.0% |
TAGTAGCCAACACTTTGGTC+TGG | + | chr1_4:66425375-66425394 | None:intergenic | 45.0% | |
!! | GTCTCTCTCTTACTGATTCC+TGG | - | chr1_4:66425651-66425670 | Msa0179000:intron | 45.0% |
! | AGTTTTCCAACTAACCTCCC+AGG | + | chr1_4:66425672-66425691 | None:intergenic | 45.0% |
!! | TACAGCTGCTGGAAGTATCT+TGG | - | chr1_4:66425995-66426014 | Msa0179000:intron | 45.0% |
AATCATCTGAAGGAAGTCCC+AGG | + | chr1_4:66426028-66426047 | None:intergenic | 45.0% | |
! | ATGTATTGATCCTCATGGCC+TGG | + | chr1_4:66426161-66426180 | None:intergenic | 45.0% |
AGGCCATGAGGATCAATACA+TGG | - | chr1_4:66426160-66426179 | Msa0179000:intron | 45.0% | |
GGCCATGAGGATCAATACAT+GGG | - | chr1_4:66426161-66426180 | Msa0179000:intron | 45.0% | |
! | GACCCATGTATTGATCCTCA+TGG | + | chr1_4:66426166-66426185 | None:intergenic | 45.0% |
TCTTCCTTCGGAAGATTCAG+AGG | - | chr1_4:66426184-66426203 | Msa0179000:intron | 45.0% | |
TCATCCTCTGAATCTTCCGA+AGG | + | chr1_4:66426191-66426210 | None:intergenic | 45.0% | |
CGATTTCACATCTGACTCTG+AGG | - | chr1_4:66426271-66426290 | Msa0179000:intron | 45.0% | |
TCTTTAGCAGAGCCAGATCT+TGG | - | chr1_4:66426431-66426450 | Msa0179000:intron | 45.0% | |
TGGTGAAGAGGATTTGACTC+CGG | - | chr1_4:66426451-66426470 | Msa0179000:intron | 45.0% | |
AGGATTTGACTCCGGTTTCT+GGG | - | chr1_4:66426459-66426478 | Msa0179000:intron | 45.0% | |
TCTACTTGGAGTAGCAGTGT+CGG | + | chr1_4:66426985-66427004 | None:intergenic | 45.0% | |
TGACCGCCAAAATAACTCCA+GGG | - | chr1_4:66427015-66427034 | Msa0179000:CDS | 45.0% | |
!!! | TGACCCTGGAGTTATTTTGG+CGG | + | chr1_4:66427021-66427040 | None:intergenic | 45.0% |
! | TGGTGACCCTGGAGTTATTT+TGG | + | chr1_4:66427024-66427043 | None:intergenic | 45.0% |
ATAACTCCAGGGTCACCAAA+TGG | - | chr1_4:66427026-66427045 | Msa0179000:CDS | 45.0% | |
AGTACGGCGGGAATTATTTG+AGG | + | chr1_4:66427057-66427076 | None:intergenic | 45.0% | |
TCACCCACCAAAACACTTGA+AGG | - | chr1_4:66427122-66427141 | Msa0179000:CDS | 45.0% | |
!! | GCATCCTTCAAGTGTTTTGG+TGG | + | chr1_4:66427129-66427148 | None:intergenic | 45.0% |
! | CGTGCATCCTTCAAGTGTTT+TGG | + | chr1_4:66427132-66427151 | None:intergenic | 45.0% |
ACTTGGAGAAGCTGTTGTTC+AGG | - | chr1_4:66427187-66427206 | Msa0179000:CDS | 45.0% | |
!!! | AAGTGATTTTTTGGGGGGAG+AGG | - | chr1_4:66427341-66427360 | Msa0179000:CDS | 45.0% |
!!! | AGTGATTTTTTGGGGGGAGA+GGG | - | chr1_4:66427342-66427361 | Msa0179000:CDS | 45.0% |
CCTCAACATGCATGCAAGTA+TGG | + | chr1_4:66427605-66427624 | None:intergenic | 45.0% | |
CCATACTTGCATGCATGTTG+AGG | - | chr1_4:66427602-66427621 | Msa0179000:CDS | 45.0% | |
! | TTGCGCCAAGCTTTCTTTTG+CGG | + | chr1_4:66427715-66427734 | None:intergenic | 45.0% |
!! | ACTGGGACTCACTTTTCAAC+AGG | - | chr1_4:66427737-66427756 | Msa0179000:intron | 45.0% |
!! | GGACTCACTTTTCAACAGGT+AGG | - | chr1_4:66427741-66427760 | Msa0179000:intron | 45.0% |
GTTAACTCAGAGTCATGGGA+GGG | + | chr1_4:66427811-66427830 | None:intergenic | 45.0% | |
CCGACATTCATCATGTAAGG+AGG | - | chr1_4:66427886-66427905 | Msa0179000:intron | 45.0% | |
! | TGAAGCATTACTACCTGGAC+TGG | + | chr1_4:66427912-66427931 | None:intergenic | 45.0% |
! | TGCTGTGAAGCATTACTACC+TGG | + | chr1_4:66427917-66427936 | None:intergenic | 45.0% |
AGGTAGTAATGCTTCACAGC+AGG | - | chr1_4:66427916-66427935 | Msa0179000:intron | 45.0% | |
! | ATTTTCAGCTCCGCTTTCAC+TGG | + | chr1_4:66427990-66428009 | None:intergenic | 45.0% |
! | TTTTTCTCCACTTGTCGCCT+GGG | + | chr1_4:66428095-66428114 | None:intergenic | 45.0% |
! | ATTTTTCTCCACTTGTCGCC+TGG | + | chr1_4:66428096-66428115 | None:intergenic | 45.0% |
AAACCCCAAGCTCGAAGAAA+AGG | - | chr1_4:66428119-66428138 | Msa0179000:intron | 45.0% | |
! | CTTCCTTTTCTTCGAGCTTG+GGG | + | chr1_4:66428125-66428144 | None:intergenic | 45.0% |
! | GCTTCCTTTTCTTCGAGCTT+GGG | + | chr1_4:66428126-66428145 | None:intergenic | 45.0% |
TTTGATTGCTTACCGGTAGC+TGG | - | chr1_4:66428199-66428218 | Msa0179000:intron | 45.0% | |
TTATTGCTTGTGCCAGCTAC+CGG | + | chr1_4:66428214-66428233 | None:intergenic | 45.0% | |
GGATCTCAATCTCACACGAT+AGG | + | chr1_4:66428299-66428318 | None:intergenic | 45.0% | |
TCGTGTGAGATTGAGATCCT+CGG | - | chr1_4:66428300-66428319 | Msa0179000:intron | 45.0% | |
TCCTCGGATGATCATCATCT+TGG | - | chr1_4:66428316-66428335 | Msa0179000:intron | 45.0% | |
TCCAAGATGATGATCATCCG+AGG | + | chr1_4:66428320-66428339 | None:intergenic | 45.0% | |
!!! | TTCTTTTAATTATTATTTTT+TGG | - | chr1_4:66425913-66425932 | Msa0179000:intron | 5.0% |
!! | AATACTATAAATAAATATAT+TGG | - | chr1_4:66427419-66427438 | Msa0179000:CDS | 5.0% |
GCAAAGCCCTAACATGGAGA+AGG | - | chr1_4:66421586-66421605 | Msa0179000:three_prime_UTR | 50.0% | |
GAAGAACGGTAGCCCAGATT+TGG | - | chr1_4:66421610-66421629 | Msa0179000:three_prime_UTR | 50.0% | |
GAGAGAAAGAGAGGGATGAG+TGG | + | chr1_4:66421707-66421726 | None:intergenic | 50.0% | |
TCTTCATATTCCTCGCCGGA+CGG | - | chr1_4:66421760-66421779 | Msa0179000:three_prime_UTR | 50.0% | |
CCAAGCAAGCAAGCAAGCTT+TGG | + | chr1_4:66422223-66422242 | None:intergenic | 50.0% | |
! | CCAAAGCTTGCTTGCTTGCT+TGG | - | chr1_4:66422220-66422239 | Msa0179000:CDS | 50.0% |
! | CTTACGAAAGGCTTTGGTGG+TGG | - | chr1_4:66422487-66422506 | Msa0179000:CDS | 50.0% |
ACTGCATCTCTCATTTCGCC+AGG | + | chr1_4:66422765-66422784 | None:intergenic | 50.0% | |
!! | ACTTGAACAGGAACGGGTTG+TGG | + | chr1_4:66422810-66422829 | None:intergenic | 50.0% |
TTCGCAACATCTCCAGAAGG+TGG | + | chr1_4:66422864-66422883 | None:intergenic | 50.0% | |
ACTGCATCACTCGTTTCACC+AGG | + | chr1_4:66422909-66422928 | None:intergenic | 50.0% | |
ATGCTTATTCTGGTGAGGGC+TGG | - | chr1_4:66423348-66423367 | Msa0179000:intron | 50.0% | |
TATTCTGGTGAGGGCTGGAA+AGG | - | chr1_4:66423353-66423372 | Msa0179000:intron | 50.0% | |
! | CGGGTCTGGCTCAGATTAAA+TGG | + | chr1_4:66424491-66424510 | None:intergenic | 50.0% |
TGGCATACACGGGATAAGCT+TGG | + | chr1_4:66424605-66424624 | None:intergenic | 50.0% | |
GCCAGAGAAGGAGATTCAAC+GGG | - | chr1_4:66425114-66425133 | Msa0179000:intron | 50.0% | |
!! | TGAGGGAGAGATTGATAGCG+AGG | - | chr1_4:66425240-66425259 | Msa0179000:intron | 50.0% |
ATGGAGGATCCAAACAGAGC+TGG | + | chr1_4:66425444-66425463 | None:intergenic | 50.0% | |
!! | CTCTCTTACTGATTCCTGGG+AGG | - | chr1_4:66425655-66425674 | Msa0179000:intron | 50.0% |
CTGATTCCTGGGAGGTTAGT+TGG | - | chr1_4:66425663-66425682 | Msa0179000:intron | 50.0% | |
CGGGAAAAACCCTCTGAACA+AGG | + | chr1_4:66425968-66425987 | None:intergenic | 50.0% | |
ATTTGAGGATCCAGGCCATG+AGG | - | chr1_4:66426148-66426167 | Msa0179000:intron | 50.0% | |
TGTGACATCATCTTGTCCGG+TGG | + | chr1_4:66426327-66426346 | None:intergenic | 50.0% | |
TGATGTCACATCTGCACCGT+TGG | - | chr1_4:66426337-66426356 | Msa0179000:intron | 50.0% | |
AGAGCCAGATCTTGGTGAAG+AGG | - | chr1_4:66426439-66426458 | Msa0179000:intron | 50.0% | |
GAGGATTTGACTCCGGTTTC+TGG | - | chr1_4:66426458-66426477 | Msa0179000:intron | 50.0% | |
GACAGCTGTGTTCCTATTGC+AGG | - | chr1_4:66426920-66426939 | Msa0179000:CDS | 50.0% | |
CTGACCGCCAAAATAACTCC+AGG | - | chr1_4:66427014-66427033 | Msa0179000:CDS | 50.0% | |
! | ATGCTGATGGGTGTTCCTCT+TGG | + | chr1_4:66427081-66427100 | None:intergenic | 50.0% |
CTTGAAGGATGCACGGAATC+TGG | - | chr1_4:66427137-66427156 | Msa0179000:CDS | 50.0% | |
! | CTTTCTTTTGCGGTCCGTTC+TGG | + | chr1_4:66427705-66427724 | None:intergenic | 50.0% |
ACGGACCGCAAAAGAAAGCT+TGG | - | chr1_4:66427707-66427726 | Msa0179000:five_prime_UTR | 50.0% | |
AGAAAGCTTGGCGCAAGAAC+TGG | - | chr1_4:66427719-66427738 | Msa0179000:five_prime_UTR | 50.0% | |
GAAAGCTTGGCGCAAGAACT+GGG | - | chr1_4:66427720-66427739 | Msa0179000:five_prime_UTR | 50.0% | |
GGTTAACTCAGAGTCATGGG+AGG | + | chr1_4:66427812-66427831 | None:intergenic | 50.0% | |
GGTTTGGCAATTCTCGTTGG+AGG | - | chr1_4:66427861-66427880 | Msa0179000:intron | 50.0% | |
AGGAGATAATGCTTCGCAGC+AGG | - | chr1_4:66427964-66427983 | Msa0179000:five_prime_UTR | 50.0% | |
GACAGCGGAGGTGAAAACAA+AGG | - | chr1_4:66428046-66428065 | Msa0179000:intron | 50.0% | |
! | GGAGCATCAACTAGTTTCCC+AGG | - | chr1_4:66428075-66428094 | Msa0179000:intron | 50.0% |
! | CGCTTCCTTTTCTTCGAGCT+TGG | + | chr1_4:66428127-66428146 | None:intergenic | 50.0% |
GAACGGTAGCCCAGATTTGG+AGG | - | chr1_4:66421613-66421632 | Msa0179000:three_prime_UTR | 55.0% | |
ATAGTAATCTCCGTCCGGCG+AGG | + | chr1_4:66421773-66421792 | None:intergenic | 55.0% | |
!! | ACGAAAGGCTTTGGTGGTGG+TGG | - | chr1_4:66422490-66422509 | Msa0179000:CDS | 55.0% |
GAGCTACTGGATCCACCTTC+TGG | - | chr1_4:66422849-66422868 | Msa0179000:intron | 55.0% | |
GTGAGGGCTGGAAAGGATAC+AGG | - | chr1_4:66423360-66423379 | Msa0179000:intron | 55.0% | |
CTTGCATGGTGCATCTCCAC+TGG | - | chr1_4:66423964-66423983 | Msa0179000:CDS | 55.0% | |
CTCACCGTTTGACACACCAG+TGG | + | chr1_4:66423983-66424002 | None:intergenic | 55.0% | |
GCCCGTTGAATCTCCTTCTC+TGG | + | chr1_4:66425118-66425137 | None:intergenic | 55.0% | |
GCGTCGCAGAATTTCGGACT+TGG | + | chr1_4:66425140-66425159 | None:intergenic | 55.0% | |
! | TGTGATGGTGCTTGTGACCG+CGG | - | chr1_4:66425412-66425431 | Msa0179000:intron | 55.0% |
AACAGAGCTGGTGATACCCG+CGG | + | chr1_4:66425432-66425451 | None:intergenic | 55.0% | |
CGGGTATCACCAGCTCTGTT+TGG | - | chr1_4:66425432-66425451 | Msa0179000:intron | 55.0% | |
TACAGTTCCACCTGGCGATG+AGG | - | chr1_4:66425559-66425578 | Msa0179000:intron | 55.0% | |
ACAGTTCCACCTGGCGATGA+GGG | - | chr1_4:66425560-66425579 | Msa0179000:intron | 55.0% | |
CATAACCAACCCTCATCGCC+AGG | + | chr1_4:66425572-66425591 | None:intergenic | 55.0% | |
!! | GATGAGGGTTGGTTATGCCC+AGG | - | chr1_4:66425575-66425594 | Msa0179000:intron | 55.0% |
TCCAGCAGCTGTAGCTGCTT+CGG | + | chr1_4:66425988-66426007 | None:intergenic | 55.0% | |
!! | TTCGCATCCTCTGGAGCATC+AGG | + | chr1_4:66426071-66426090 | None:intergenic | 55.0% |
TGATGCTCCAGAGGATGCGA+AGG | - | chr1_4:66426070-66426089 | Msa0179000:intron | 55.0% | |
CCTTCAACCTTCGCATCCTC+TGG | + | chr1_4:66426080-66426099 | None:intergenic | 55.0% | |
CCAGAGGATGCGAAGGTTGA+AGG | - | chr1_4:66426077-66426096 | Msa0179000:intron | 55.0% | |
GAGGATGCGAAGGTTGAAGG+AGG | - | chr1_4:66426080-66426099 | Msa0179000:intron | 55.0% | |
! | AGCACCAGGATTGGGAGCAT+CGG | + | chr1_4:66426225-66426244 | None:intergenic | 55.0% |
! | GCGTTTCCATTTGGTGACCC+TGG | + | chr1_4:66427035-66427054 | None:intergenic | 55.0% |
TGTTCCTCTTGGCAGTACGG+CGG | + | chr1_4:66427070-66427089 | None:intergenic | 55.0% | |
GGGTGTTCCTCTTGGCAGTA+CGG | + | chr1_4:66427073-66427092 | None:intergenic | 55.0% | |
TCATGTAAGGAGGCCAGTCC+AGG | - | chr1_4:66427896-66427915 | Msa0179000:intron | 55.0% | |
TCACAGCAGGCCAATGACAG+TGG | - | chr1_4:66427929-66427948 | Msa0179000:intron | 55.0% | |
! | GTTTTCACCTCCGCTGTCAG+TGG | + | chr1_4:66428044-66428063 | None:intergenic | 55.0% |
CTAGTTTCCCAGGCGACAAG+TGG | - | chr1_4:66428085-66428104 | Msa0179000:intron | 55.0% | |
! | AGCCGCAGACATCTGAAGCA+GGG | - | chr1_4:66428155-66428174 | Msa0179000:intron | 55.0% |
AGCCCTGCTTCAGATGTCTG+CGG | + | chr1_4:66428160-66428179 | None:intergenic | 55.0% | |
!! | GAAGCAGGGCTGGTCCATAA+CGG | - | chr1_4:66428169-66428188 | Msa0179000:intron | 55.0% |
GAAGCAGCGACAGAGCTCTG+CGG | - | chr1_4:66423120-66423139 | Msa0179000:CDS | 60.0% | |
! | GTGATGGTGCTTGTGACCGC+GGG | - | chr1_4:66425413-66425432 | Msa0179000:intron | 60.0% |
CTGCGGCTTACAGTTCCACC+TGG | - | chr1_4:66425551-66425570 | Msa0179000:intron | 60.0% | |
TTCCACCTGGCGATGAGGGT+TGG | - | chr1_4:66425564-66425583 | Msa0179000:intron | 60.0% | |
AACCAACCCTCATCGCCAGG+TGG | + | chr1_4:66425569-66425588 | None:intergenic | 60.0% | |
CCAGCAGCTGTAGCTGCTTC+GGG | + | chr1_4:66425987-66426006 | None:intergenic | 60.0% | |
GATCCCGATGCTCCCAATCC+TGG | - | chr1_4:66426218-66426237 | Msa0179000:intron | 60.0% | |
!! | GCACCAGGATTGGGAGCATC+GGG | + | chr1_4:66426224-66426243 | None:intergenic | 60.0% |
ATTCCCGCCGTACTGCCAAG+AGG | - | chr1_4:66427063-66427082 | Msa0179000:CDS | 60.0% | |
GTTCCTCTTGGCAGTACGGC+GGG | + | chr1_4:66427069-66427088 | None:intergenic | 60.0% | |
TCGCAGCAGGCCAGTGAAAG+CGG | - | chr1_4:66427977-66427996 | Msa0179000:five_prime_UTR | 60.0% | |
TCGCAGCAAGCCACTGACAG+CGG | - | chr1_4:66428031-66428050 | Msa0179000:intron | 60.0% | |
! | GAGCCGCAGACATCTGAAGC+AGG | - | chr1_4:66428154-66428173 | Msa0179000:intron | 60.0% |
! | GCAGACATCTGAAGCAGGGC+TGG | - | chr1_4:66428159-66428178 | Msa0179000:intron | 60.0% |
CCCGAAGCAGCTACAGCTGC+TGG | - | chr1_4:66425984-66426003 | Msa0179000:intron | 65.0% | |
CAGCAAGCCACTGACAGCGG+AGG | - | chr1_4:66428034-66428053 | Msa0179000:intron | 65.0% | |
GCGACAGAGCTCTGCGGTCG+AGG | - | chr1_4:66423126-66423145 | Msa0179000:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 66421551 | 66428680 | 66421551 | ID=Msa0179000;Name=Msa0179000 |
chr1_4 | mRNA | 66421551 | 66428680 | 66421551 | ID=Msa0179000-mRNA-1;Parent=Msa0179000;Name=Msa0179000-mRNA-1;_AED=0.04;_eAED=0.04;_QI=397|1|1|1|0.77|0.7|10|422|851 |
chr1_4 | exon | 66421551 | 66422380 | 66421551 | ID=Msa0179000-mRNA-1:exon:21752;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66422473 | 66422562 | 66422473 | ID=Msa0179000-mRNA-1:exon:21751;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66423023 | 66423289 | 66423023 | ID=Msa0179000-mRNA-1:exon:21750;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66423708 | 66424256 | 66423708 | ID=Msa0179000-mRNA-1:exon:21749;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66424555 | 66424667 | 66424555 | ID=Msa0179000-mRNA-1:exon:21748;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66424753 | 66424876 | 66424753 | ID=Msa0179000-mRNA-1:exon:21747;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66424967 | 66425132 | 66424967 | ID=Msa0179000-mRNA-1:exon:21746;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66426850 | 66427752 | 66426850 | ID=Msa0179000-mRNA-1:exon:21745;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66427950 | 66428022 | 66427950 | ID=Msa0179000-mRNA-1:exon:21744;Parent=Msa0179000-mRNA-1 |
chr1_4 | exon | 66428421 | 66428680 | 66428421 | ID=Msa0179000-mRNA-1:exon:21743;Parent=Msa0179000-mRNA-1 |
chr1_4 | five_prime_UTR | 66428421 | 66428680 | 66428421 | ID=Msa0179000-mRNA-1:five_prime_utr;Parent=Msa0179000-mRNA-1 |
chr1_4 | five_prime_UTR | 66427950 | 66428022 | 66427950 | ID=Msa0179000-mRNA-1:five_prime_utr;Parent=Msa0179000-mRNA-1 |
chr1_4 | five_prime_UTR | 66427689 | 66427752 | 66427689 | ID=Msa0179000-mRNA-1:five_prime_utr;Parent=Msa0179000-mRNA-1 |
chr1_4 | CDS | 66426850 | 66427688 | 66426850 | ID=Msa0179000-mRNA-1:cds;Parent=Msa0179000-mRNA-1 |
chr1_4 | CDS | 66424967 | 66425132 | 66424967 | ID=Msa0179000-mRNA-1:cds;Parent=Msa0179000-mRNA-1 |
chr1_4 | CDS | 66424753 | 66424876 | 66424753 | ID=Msa0179000-mRNA-1:cds;Parent=Msa0179000-mRNA-1 |
chr1_4 | CDS | 66424555 | 66424667 | 66424555 | ID=Msa0179000-mRNA-1:cds;Parent=Msa0179000-mRNA-1 |
chr1_4 | CDS | 66423708 | 66424256 | 66423708 | ID=Msa0179000-mRNA-1:cds;Parent=Msa0179000-mRNA-1 |
chr1_4 | CDS | 66423023 | 66423289 | 66423023 | ID=Msa0179000-mRNA-1:cds;Parent=Msa0179000-mRNA-1 |
chr1_4 | CDS | 66422473 | 66422562 | 66422473 | ID=Msa0179000-mRNA-1:cds;Parent=Msa0179000-mRNA-1 |
chr1_4 | CDS | 66421973 | 66422380 | 66421973 | ID=Msa0179000-mRNA-1:cds;Parent=Msa0179000-mRNA-1 |
chr1_4 | three_prime_UTR | 66421551 | 66421972 | 66421551 | ID=Msa0179000-mRNA-1:three_prime_utr;Parent=Msa0179000-mRNA-1 |
Gene Sequence |
Protein sequence |