Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1261470 | XP_003609209.3 | 93.772 | 562 | 15 | 4 | 1 | 549 | 1 | 555 | 0.0 | 854 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1261470 | sp|Q28IQ9|CIRBP_XENTR | 38.158 | 76 | 46 | 1 | 5 | 79 | 4 | 79 | 3.49e-12 | 68.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006700 | Msa1261470 | 0.814798 | 1.282450e-51 | -8.615850e-47 |
Msa0012470 | Msa1261470 | 0.808202 | 3.476940e-50 | -8.615850e-47 |
Msa0020630 | Msa1261470 | 0.838565 | 2.666049e-57 | -8.615850e-47 |
Msa0027540 | Msa1261470 | 0.847593 | 1.048271e-59 | -8.615850e-47 |
Msa0032120 | Msa1261470 | 0.831936 | 1.258500e-55 | -8.615850e-47 |
Msa0032400 | Msa1261470 | 0.816388 | 5.675645e-52 | -8.615850e-47 |
Msa0038350 | Msa1261470 | -0.857422 | 1.650192e-62 | -8.615850e-47 |
Msa0044710 | Msa1261470 | 0.824815 | 6.578067e-54 | -8.615850e-47 |
Msa0046660 | Msa1261470 | -0.808370 | 3.202502e-50 | -8.615850e-47 |
Msa0050720 | Msa1261470 | 0.825995 | 3.457244e-54 | -8.615850e-47 |
Msa0050770 | Msa1261470 | 0.833901 | 4.087268e-56 | -8.615850e-47 |
Msa0054640 | Msa1261470 | 0.802250 | 6.134530e-49 | -8.615850e-47 |
Msa0068410 | Msa1261470 | 0.811733 | 6.039017e-51 | -8.615850e-47 |
Msa0073820 | Msa1261470 | 0.809369 | 1.958176e-50 | -8.615850e-47 |
Msa0075310 | Msa1261470 | 0.843785 | 1.132015e-58 | -8.615850e-47 |
Msa0079650 | Msa1261470 | 0.803036 | 4.222108e-49 | -8.615850e-47 |
Msa0084680 | Msa1261470 | 0.808504 | 2.998824e-50 | -8.615850e-47 |
Msa0091770 | Msa1261470 | 0.844101 | 9.309099e-59 | -8.615850e-47 |
Msa0094100 | Msa1261470 | 0.825192 | 5.360177e-54 | -8.615850e-47 |
Msa0101060 | Msa1261470 | 0.805401 | 1.358921e-49 | -8.615850e-47 |
Msa0106370 | Msa1261470 | -0.803206 | 3.893653e-49 | -8.615850e-47 |
Msa0111310 | Msa1261470 | 0.807036 | 6.148704e-50 | -8.615850e-47 |
Msa0114250 | Msa1261470 | 0.806657 | 7.396958e-50 | -8.615850e-47 |
Msa0119850 | Msa1261470 | 0.817483 | 3.221965e-52 | -8.615850e-47 |
Msa0605620 | Msa1261470 | 0.809432 | 1.897359e-50 | -8.615850e-47 |
Msa0610620 | Msa1261470 | 0.804006 | 2.657391e-49 | -8.615850e-47 |
Msa0618010 | Msa1261470 | 0.802095 | 6.601154e-49 | -8.615850e-47 |
Msa0620640 | Msa1261470 | 0.818024 | 2.432649e-52 | -8.615850e-47 |
Msa0621120 | Msa1261470 | 0.823486 | 1.349871e-53 | -8.615850e-47 |
Msa0621890 | Msa1261470 | 0.812614 | 3.880812e-51 | -8.615850e-47 |
Msa0626230 | Msa1261470 | 0.806032 | 1.001456e-49 | -8.615850e-47 |
Msa0629370 | Msa1261470 | 0.800241 | 1.580636e-48 | -8.615850e-47 |
Msa0630990 | Msa1261470 | 0.820583 | 6.352954e-53 | -8.615850e-47 |
Msa0638280 | Msa1261470 | 0.834598 | 2.731866e-56 | -8.615850e-47 |
Msa0638320 | Msa1261470 | 0.828079 | 1.097417e-54 | -8.615850e-47 |
Msa0657050 | Msa1261470 | 0.830251 | 3.262171e-55 | -8.615850e-47 |
Msa0657670 | Msa1261470 | 0.841287 | 5.207059e-58 | -8.615850e-47 |
Msa0660880 | Msa1261470 | -0.803482 | 3.413713e-49 | -8.615850e-47 |
Msa0677270 | Msa1261470 | 0.824329 | 8.564274e-54 | -8.615850e-47 |
Msa0677820 | Msa1261470 | 0.805236 | 1.471502e-49 | -8.615850e-47 |
Msa0678820 | Msa1261470 | 0.803960 | 2.715834e-49 | -8.615850e-47 |
Msa0686850 | Msa1261470 | 0.806638 | 7.462884e-50 | -8.615850e-47 |
Msa0697140 | Msa1261470 | 0.818542 | 1.856309e-52 | -8.615850e-47 |
Msa0697540 | Msa1261470 | 0.807498 | 4.907878e-50 | -8.615850e-47 |
Msa0701030 | Msa1261470 | 0.822775 | 1.977740e-53 | -8.615850e-47 |
Msa0707780 | Msa1261470 | 0.803309 | 3.706543e-49 | -8.615850e-47 |
Msa0708230 | Msa1261470 | 0.804546 | 2.050877e-49 | -8.615850e-47 |
Msa0714600 | Msa1261470 | 0.839734 | 1.327544e-57 | -8.615850e-47 |
Msa0715310 | Msa1261470 | 0.815787 | 7.731351e-52 | -8.615850e-47 |
Msa0722930 | Msa1261470 | 0.851723 | 7.370704e-61 | -8.615850e-47 |
Msa0723140 | Msa1261470 | 0.847710 | 9.732981e-60 | -8.615850e-47 |
Msa0728280 | Msa1261470 | 0.809773 | 1.603297e-50 | -8.615850e-47 |
Msa0728380 | Msa1261470 | 0.804205 | 2.415777e-49 | -8.615850e-47 |
Msa0728540 | Msa1261470 | 0.804261 | 2.351026e-49 | -8.615850e-47 |
Msa0734660 | Msa1261470 | 0.803404 | 3.542869e-49 | -8.615850e-47 |
Msa0743650 | Msa1261470 | 0.819979 | 8.737908e-53 | -8.615850e-47 |
Msa0744500 | Msa1261470 | 0.801676 | 8.048693e-49 | -8.615850e-47 |
Msa0748610 | Msa1261470 | 0.809619 | 1.730190e-50 | -8.615850e-47 |
Msa0750380 | Msa1261470 | 0.818160 | 2.266303e-52 | -8.615850e-47 |
Msa0757180 | Msa1261470 | 0.808897 | 2.470685e-50 | -8.615850e-47 |
Msa0760890 | Msa1261470 | 0.811138 | 8.132692e-51 | -8.615850e-47 |
Msa0768490 | Msa1261470 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
Msa0769390 | Msa1261470 | 0.813623 | 2.330894e-51 | -8.615850e-47 |
Msa0773610 | Msa1261470 | 0.839880 | 1.215821e-57 | -8.615850e-47 |
Msa0776480 | Msa1261470 | 0.816049 | 6.756940e-52 | -8.615850e-47 |
Msa0783340 | Msa1261470 | 0.819485 | 1.133295e-52 | -8.615850e-47 |
Msa0788360 | Msa1261470 | 0.822266 | 2.596355e-53 | -8.615850e-47 |
Msa0789570 | Msa1261470 | 0.807416 | 5.109710e-50 | -8.615850e-47 |
Msa0789690 | Msa1261470 | 0.804727 | 1.880275e-49 | -8.615850e-47 |
Msa0792510 | Msa1261470 | 0.846194 | 2.531055e-59 | -8.615850e-47 |
Msa0795920 | Msa1261470 | 0.804201 | 2.420442e-49 | -8.615850e-47 |
Msa0801020 | Msa1261470 | 0.819260 | 1.275123e-52 | -8.615850e-47 |
Msa0816640 | Msa1261470 | 0.800958 | 1.128678e-48 | -8.615850e-47 |
Msa0824680 | Msa1261470 | 0.801945 | 7.086473e-49 | -8.615850e-47 |
Msa0826650 | Msa1261470 | 0.822412 | 2.401675e-53 | -8.615850e-47 |
Msa0828570 | Msa1261470 | 0.842798 | 2.074536e-58 | -8.615850e-47 |
Msa0830720 | Msa1261470 | 0.807451 | 5.021806e-50 | -8.615850e-47 |
Msa0832370 | Msa1261470 | 0.822963 | 1.788021e-53 | -8.615850e-47 |
Msa0837990 | Msa1261470 | 0.810470 | 1.134675e-50 | -8.615850e-47 |
Msa0123170 | Msa1261470 | 0.803227 | 3.854580e-49 | -8.615850e-47 |
Msa0144330 | Msa1261470 | 0.814566 | 1.443372e-51 | -8.615850e-47 |
Msa0149500 | Msa1261470 | 0.818648 | 1.756839e-52 | -8.615850e-47 |
Msa0152370 | Msa1261470 | 0.810866 | 9.314420e-51 | -8.615850e-47 |
Msa0153430 | Msa1261470 | 0.804151 | 2.478870e-49 | -8.615850e-47 |
Msa0153440 | Msa1261470 | 0.810417 | 1.164809e-50 | -8.615850e-47 |
Msa0159750 | Msa1261470 | 0.836888 | 7.185753e-57 | -8.615850e-47 |
Msa0168100 | Msa1261470 | 0.853662 | 2.059903e-61 | -8.615850e-47 |
Msa0181410 | Msa1261470 | 0.811306 | 7.479808e-51 | -8.615850e-47 |
Msa0182930 | Msa1261470 | 0.833658 | 4.698763e-56 | -8.615850e-47 |
Msa0183610 | Msa1261470 | 0.821799 | 3.331042e-53 | -8.615850e-47 |
Msa0185480 | Msa1261470 | 0.808196 | 3.487200e-50 | -8.615850e-47 |
Msa0185640 | Msa1261470 | -0.858218 | 9.580377e-63 | -8.615850e-47 |
Msa0185700 | Msa1261470 | 0.823175 | 1.595768e-53 | -8.615850e-47 |
Msa0198440 | Msa1261470 | 0.814123 | 1.808329e-51 | -8.615850e-47 |
Msa0200950 | Msa1261470 | -0.830947 | 2.204025e-55 | -8.615850e-47 |
Msa0201330 | Msa1261470 | 0.808962 | 2.393395e-50 | -8.615850e-47 |
Msa0207000 | Msa1261470 | 0.846024 | 2.816153e-59 | -8.615850e-47 |
Msa0208390 | Msa1261470 | 0.828705 | 7.750853e-55 | -8.615850e-47 |
Msa0208630 | Msa1261470 | 0.809571 | 1.771950e-50 | -8.615850e-47 |
Msa0225000 | Msa1261470 | 0.826852 | 2.160435e-54 | -8.615850e-47 |
Msa1228210 | Msa1261470 | 0.823683 | 1.213560e-53 | -8.615850e-47 |
Msa1229660 | Msa1261470 | 0.817387 | 3.385371e-52 | -8.615850e-47 |
Msa1229690 | Msa1261470 | 0.808013 | 3.814407e-50 | -8.615850e-47 |
Msa1254750 | Msa1261470 | 0.801085 | 1.063289e-48 | -8.615850e-47 |
Msa1254950 | Msa1261470 | 0.812939 | 3.294171e-51 | -8.615850e-47 |
Msa1256540 | Msa1261470 | -0.858333 | 8.856478e-63 | -8.615850e-47 |
Msa1258280 | Msa1261470 | 0.819395 | 1.187812e-52 | -8.615850e-47 |
Msa1261470 | Msa1262310 | 0.808911 | 2.453589e-50 | -8.615850e-47 |
Msa1261470 | Msa1265960 | 0.828333 | 9.528624e-55 | -8.615850e-47 |
Msa1261470 | Msa1271280 | 0.830474 | 2.877469e-55 | -8.615850e-47 |
Msa1261470 | Msa1271300 | 0.811747 | 5.998959e-51 | -8.615850e-47 |
Msa1261470 | Msa1280120 | 0.812277 | 4.597571e-51 | -8.615850e-47 |
Msa1261470 | Msa1280130 | 0.808771 | 2.629009e-50 | -8.615850e-47 |
Msa1261470 | Msa1284140 | 0.800465 | 1.423380e-48 | -8.615850e-47 |
Msa1261470 | Msa1284220 | 0.803476 | 3.423927e-49 | -8.615850e-47 |
Msa1261470 | Msa1288320 | -0.803827 | 2.894817e-49 | -8.615850e-47 |
Msa1261470 | Msa1295690 | 0.807604 | 4.660073e-50 | -8.615850e-47 |
Msa1261470 | Msa1296960 | -0.856555 | 2.971575e-62 | -8.615850e-47 |
Msa1261470 | Msa1297090 | 0.853030 | 3.127040e-61 | -8.615850e-47 |
Msa1261470 | Msa1298290 | 0.816545 | 5.232478e-52 | -8.615850e-47 |
Msa1261470 | Msa1304180 | 0.997629 | 4.526698e-246 | -8.615850e-47 |
Msa1261470 | Msa1308480 | 0.812680 | 3.752851e-51 | -8.615850e-47 |
Msa1261470 | Msa1310110 | 0.827424 | 1.576758e-54 | -8.615850e-47 |
Msa1261470 | Msa1317030 | 0.809775 | 1.601299e-50 | -8.615850e-47 |
Msa1261470 | Msa1323190 | 0.813507 | 2.471484e-51 | -8.615850e-47 |
Msa1261470 | Msa1328850 | 0.852360 | 4.858586e-61 | -8.615850e-47 |
Msa1261470 | Msa1329990 | 0.820931 | 5.283430e-53 | -8.615850e-47 |
Msa1261470 | Msa1335860 | 0.819893 | 9.144860e-53 | -8.615850e-47 |
Msa1261470 | Msa1335970 | -0.804631 | 1.969407e-49 | -8.615850e-47 |
Msa1261470 | Msa1336470 | 0.827138 | 1.846498e-54 | -8.615850e-47 |
Msa1261470 | Msa1342430 | 0.819296 | 1.251274e-52 | -8.615850e-47 |
Msa1261470 | Msa1347290 | 0.828880 | 7.028337e-55 | -8.615850e-47 |
Msa1261470 | Msa1347620 | 0.824712 | 6.958898e-54 | -8.615850e-47 |
Msa1261470 | Msa1358870 | -0.824663 | 7.142977e-54 | -8.615850e-47 |
Msa1261470 | Msa1358960 | 0.842684 | 2.225508e-58 | -8.615850e-47 |
Msa1261470 | Msa1373950 | 0.834754 | 2.495611e-56 | -8.615850e-47 |
Msa1261470 | Msa1385620 | 0.802692 | 4.971869e-49 | -8.615850e-47 |
Msa1261470 | Msa1385900 | 0.820764 | 5.771617e-53 | -8.615850e-47 |
Msa1261470 | Msa1395230 | -0.813990 | 1.935227e-51 | -8.615850e-47 |
Msa1261470 | Msa1398480 | 0.842641 | 2.284284e-58 | -8.615850e-47 |
Msa1261470 | Msa1411070 | 0.835415 | 1.700293e-56 | -8.615850e-47 |
Msa1261470 | Msa1417530 | 0.821569 | 3.765927e-53 | -8.615850e-47 |
Msa1261470 | Msa1418200 | 0.808415 | 3.131973e-50 | -8.615850e-47 |
Msa1261470 | Msa1421870 | 0.809106 | 2.229146e-50 | -8.615850e-47 |
Msa1261470 | Msa1423450 | 0.812028 | 5.208888e-51 | -8.615850e-47 |
Msa1261470 | Msa1427830 | 0.854646 | 1.071231e-61 | -8.615850e-47 |
Msa1261470 | Msa1428420 | 0.833662 | 4.688760e-56 | -8.615850e-47 |
Msa1261470 | Msa1431000 | 0.818075 | 2.368818e-52 | -8.615850e-47 |
Msa1261470 | Msa1438270 | 0.830580 | 2.710386e-55 | -8.615850e-47 |
Msa1261470 | Msa1440610 | 0.824228 | 9.044226e-54 | -8.615850e-47 |
Msa1261470 | Msa1447440 | 0.842759 | 2.125408e-58 | -8.615850e-47 |
Msa1261470 | Msa1450020 | 0.819731 | 9.956717e-53 | -8.615850e-47 |
Msa1261470 | Msa1453620 | 0.828492 | 8.723283e-55 | -8.615850e-47 |
Msa1261470 | Msa1454110 | 0.837306 | 5.619580e-57 | -8.615850e-47 |
Msa1261470 | Msa1456810 | 0.801180 | 1.017027e-48 | -8.615850e-47 |
Msa1261470 | Msa1460310 | -0.837331 | 5.536215e-57 | -8.615850e-47 |
Msa1261470 | Msa1463970 | 0.818595 | 1.805482e-52 | -8.615850e-47 |
Msa1261470 | Msa1464560 | 0.810080 | 1.376998e-50 | -8.615850e-47 |
Msa0367140 | Msa1261470 | -0.809950 | 1.468266e-50 | -8.615850e-47 |
Msa0371540 | Msa1261470 | 0.815428 | 9.291785e-52 | -8.615850e-47 |
Msa0376510 | Msa1261470 | 0.829977 | 3.806438e-55 | -8.615850e-47 |
Msa0377280 | Msa1261470 | 0.809798 | 1.583422e-50 | -8.615850e-47 |
Msa0378080 | Msa1261470 | 0.810617 | 1.054611e-50 | -8.615850e-47 |
Msa0389060 | Msa1261470 | 0.807244 | 5.555498e-50 | -8.615850e-47 |
Msa0404690 | Msa1261470 | 0.801230 | 9.931731e-49 | -8.615850e-47 |
Msa0412970 | Msa1261470 | 0.819906 | 9.079481e-53 | -8.615850e-47 |
Msa0413740 | Msa1261470 | 0.812808 | 3.518334e-51 | -8.615850e-47 |
Msa0416800 | Msa1261470 | 0.805251 | 1.460572e-49 | -8.615850e-47 |
Msa0418430 | Msa1261470 | 0.803757 | 2.993190e-49 | -8.615850e-47 |
Msa0419970 | Msa1261470 | 0.807100 | 5.960705e-50 | -8.615850e-47 |
Msa0423360 | Msa1261470 | -0.808348 | 3.236350e-50 | -8.615850e-47 |
Msa0425050 | Msa1261470 | 0.837642 | 4.607252e-57 | -8.615850e-47 |
Msa0426110 | Msa1261470 | 0.809220 | 2.107665e-50 | -8.615850e-47 |
Msa0430620 | Msa1261470 | 0.816345 | 5.802248e-52 | -8.615850e-47 |
Msa0431710 | Msa1261470 | 0.806996 | 6.271421e-50 | -8.615850e-47 |
Msa0434050 | Msa1261470 | 0.816664 | 4.921535e-52 | -8.615850e-47 |
Msa0442850 | Msa1261470 | 0.809590 | 1.755158e-50 | -8.615850e-47 |
Msa0450050 | Msa1261470 | 0.814989 | 1.163385e-51 | -8.615850e-47 |
Msa0462590 | Msa1261470 | 0.843180 | 1.641859e-58 | -8.615850e-47 |
Msa0463460 | Msa1261470 | 0.825495 | 4.544817e-54 | -8.615850e-47 |
Msa0465790 | Msa1261470 | 0.811884 | 5.600358e-51 | -8.615850e-47 |
Msa0466060 | Msa1261470 | 0.816951 | 4.244027e-52 | -8.615850e-47 |
Msa0467900 | Msa1261470 | -0.800379 | 1.481925e-48 | -8.615850e-47 |
Msa0470180 | Msa1261470 | 0.822016 | 2.967710e-53 | -8.615850e-47 |
Msa0481380 | Msa1261470 | 0.812480 | 4.150519e-51 | -8.615850e-47 |
Msa0980440 | Msa1261470 | 0.850664 | 1.467475e-60 | -8.615850e-47 |
Msa0981740 | Msa1261470 | 0.824704 | 6.986954e-54 | -8.615850e-47 |
Msa0996130 | Msa1261470 | 0.828784 | 7.414124e-55 | -8.615850e-47 |
Msa1004210 | Msa1261470 | 0.834891 | 2.305836e-56 | -8.615850e-47 |
Msa1004260 | Msa1261470 | 0.814420 | 1.554583e-51 | -8.615850e-47 |
Msa1008490 | Msa1261470 | 0.818103 | 2.334193e-52 | -8.615850e-47 |
Msa1009000 | Msa1261470 | 0.801447 | 8.964762e-49 | -8.615850e-47 |
Msa1016670 | Msa1261470 | 0.844635 | 6.689967e-59 | -8.615850e-47 |
Msa1026500 | Msa1261470 | 0.807489 | 4.930843e-50 | -8.615850e-47 |
Msa1032350 | Msa1261470 | 0.816779 | 4.638036e-52 | -8.615850e-47 |
Msa1036390 | Msa1261470 | 0.867371 | 1.437919e-65 | -8.615850e-47 |
Msa1037000 | Msa1261470 | 0.826971 | 2.023350e-54 | -8.615850e-47 |
Msa1038050 | Msa1261470 | 0.846650 | 1.901089e-59 | -8.615850e-47 |
Msa1046610 | Msa1261470 | 0.848645 | 5.370706e-60 | -8.615850e-47 |
Msa1058010 | Msa1261470 | 0.812284 | 4.580885e-51 | -8.615850e-47 |
Msa1065370 | Msa1261470 | 0.815104 | 1.096689e-51 | -8.615850e-47 |
Msa1072350 | Msa1261470 | 0.827527 | 1.489436e-54 | -8.615850e-47 |
Msa1073840 | Msa1261470 | 0.841846 | 3.708007e-58 | -8.615850e-47 |
Msa1076680 | Msa1261470 | 0.862622 | 4.447375e-64 | -8.615850e-47 |
Msa1080460 | Msa1261470 | 0.832168 | 1.102637e-55 | -8.615850e-47 |
Msa1083410 | Msa1261470 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
Msa1087530 | Msa1261470 | 0.803137 | 4.024779e-49 | -8.615850e-47 |
Msa1095800 | Msa1261470 | -0.805268 | 1.448885e-49 | -8.615850e-47 |
Msa1098560 | Msa1261470 | 0.808178 | 3.518375e-50 | -8.615850e-47 |
Msa1102540 | Msa1261470 | 0.819329 | 1.229590e-52 | -8.615850e-47 |
Msa0240780 | Msa1261470 | 0.832550 | 8.868236e-56 | -8.615850e-47 |
Msa0243910 | Msa1261470 | 0.803354 | 3.628655e-49 | -8.615850e-47 |
Msa0252180 | Msa1261470 | 0.800107 | 1.683128e-48 | -8.615850e-47 |
Msa0254290 | Msa1261470 | 0.808616 | 2.836951e-50 | -8.615850e-47 |
Msa0258670 | Msa1261470 | -0.851253 | 1.000971e-60 | -8.615850e-47 |
Msa0264940 | Msa1261470 | -0.834636 | 2.673104e-56 | -8.615850e-47 |
Msa0265820 | Msa1261470 | 0.827567 | 1.456594e-54 | -8.615850e-47 |
Msa0269360 | Msa1261470 | 0.822028 | 2.948418e-53 | -8.615850e-47 |
Msa0278670 | Msa1261470 | 0.811262 | 7.646374e-51 | -8.615850e-47 |
Msa0282170 | Msa1261470 | 0.823982 | 1.032700e-53 | -8.615850e-47 |
Msa0288240 | Msa1261470 | 0.818333 | 2.070043e-52 | -8.615850e-47 |
Msa0288330 | Msa1261470 | 0.843504 | 1.345737e-58 | -8.615850e-47 |
Msa0298940 | Msa1261470 | 0.848149 | 7.364840e-60 | -8.615850e-47 |
Msa0298970 | Msa1261470 | 0.843902 | 1.053138e-58 | -8.615850e-47 |
Msa0302990 | Msa1261470 | -0.836734 | 7.865841e-57 | -8.615850e-47 |
Msa0304740 | Msa1261470 | 0.812336 | 4.463722e-51 | -8.615850e-47 |
Msa0304920 | Msa1261470 | 0.821506 | 3.894208e-53 | -8.615850e-47 |
Msa0312690 | Msa1261470 | -0.813733 | 2.204708e-51 | -8.615850e-47 |
Msa0318070 | Msa1261470 | 0.800648 | 1.305862e-48 | -8.615850e-47 |
Msa0318250 | Msa1261470 | 0.831268 | 1.838179e-55 | -8.615850e-47 |
Msa0318270 | Msa1261470 | 0.861247 | 1.173224e-63 | -8.615850e-47 |
Msa0318310 | Msa1261470 | 0.859636 | 3.606218e-63 | -8.615850e-47 |
Msa0325470 | Msa1261470 | 0.812854 | 3.437582e-51 | -8.615850e-47 |
Msa0326670 | Msa1261470 | 0.816492 | 5.377936e-52 | -8.615850e-47 |
Msa0327860 | Msa1261470 | 0.808496 | 3.009503e-50 | -8.615850e-47 |
Msa0331590 | Msa1261470 | 0.815883 | 7.358680e-52 | -8.615850e-47 |
Msa0331920 | Msa1261470 | 0.802460 | 5.550562e-49 | -8.615850e-47 |
Msa0342200 | Msa1261470 | 0.861830 | 7.786230e-64 | -8.615850e-47 |
Msa0342340 | Msa1261470 | -0.856481 | 3.124748e-62 | -8.615850e-47 |
Msa0358170 | Msa1261470 | 0.835456 | 1.660770e-56 | -8.615850e-47 |
Msa1111630 | Msa1261470 | 0.879833 | 9.023969e-70 | -8.615850e-47 |
Msa1111760 | Msa1261470 | 0.807334 | 5.317051e-50 | -8.615850e-47 |
Msa1112000 | Msa1261470 | 0.846858 | 1.668135e-59 | -8.615850e-47 |
Msa1114020 | Msa1261470 | 0.816149 | 6.416932e-52 | -8.615850e-47 |
Msa1115330 | Msa1261470 | 0.819119 | 1.372648e-52 | -8.615850e-47 |
Msa1116550 | Msa1261470 | 0.820347 | 7.197288e-53 | -8.615850e-47 |
Msa1118140 | Msa1261470 | 0.828215 | 1.017498e-54 | -8.615850e-47 |
Msa1129560 | Msa1261470 | 0.810315 | 1.225102e-50 | -8.615850e-47 |
Msa1129720 | Msa1261470 | 0.816497 | 5.365016e-52 | -8.615850e-47 |
Msa1130650 | Msa1261470 | 0.822820 | 1.930951e-53 | -8.615850e-47 |
Msa1132890 | Msa1261470 | 0.807978 | 3.881352e-50 | -8.615850e-47 |
Msa1133660 | Msa1261470 | 0.806078 | 9.795309e-50 | -8.615850e-47 |
Msa1142850 | Msa1261470 | -0.821824 | 3.287165e-53 | -8.615850e-47 |
Msa1154070 | Msa1261470 | 0.815304 | 9.900052e-52 | -8.615850e-47 |
Msa1156180 | Msa1261470 | 0.815027 | 1.140611e-51 | -8.615850e-47 |
Msa1159360 | Msa1261470 | 0.805591 | 1.239857e-49 | -8.615850e-47 |
Msa1159990 | Msa1261470 | 0.808236 | 3.419736e-50 | -8.615850e-47 |
Msa1167000 | Msa1261470 | 0.807355 | 5.264369e-50 | -8.615850e-47 |
Msa1167170 | Msa1261470 | 0.864314 | 1.329646e-64 | -8.615850e-47 |
Msa1170040 | Msa1261470 | -0.807345 | 5.290326e-50 | -8.615850e-47 |
Msa1171690 | Msa1261470 | 0.837012 | 6.680288e-57 | -8.615850e-47 |
Msa1177240 | Msa1261470 | 0.808003 | 3.833287e-50 | -8.615850e-47 |
Msa1182830 | Msa1261470 | 0.808283 | 3.341787e-50 | -8.615850e-47 |
Msa1184730 | Msa1261470 | 0.809085 | 2.252759e-50 | -8.615850e-47 |
Msa1186570 | Msa1261470 | 0.813870 | 2.056806e-51 | -8.615850e-47 |
Msa1204980 | Msa1261470 | -0.846492 | 2.099061e-59 | -8.615850e-47 |
Msa1205010 | Msa1261470 | -0.846196 | 2.527563e-59 | -8.615850e-47 |
Msa1205130 | Msa1261470 | 0.807910 | 4.011903e-50 | -8.615850e-47 |
Msa1206020 | Msa1261470 | 0.854552 | 1.141151e-61 | -8.615850e-47 |
Msa1207480 | Msa1261470 | -0.818301 | 2.105520e-52 | -8.615850e-47 |
Msa1210770 | Msa1261470 | 0.846282 | 2.395381e-59 | -8.615850e-47 |
Msa1211070 | Msa1261470 | 0.801002 | 1.105845e-48 | -8.615850e-47 |
Msa1211090 | Msa1261470 | 0.813356 | 2.667813e-51 | -8.615850e-47 |
Msa1211110 | Msa1261470 | 0.804937 | 1.699586e-49 | -8.615850e-47 |
Msa1220230 | Msa1261470 | 0.822452 | 2.351023e-53 | -8.615850e-47 |
Msa1221200 | Msa1261470 | -0.845135 | 4.905851e-59 | -8.615850e-47 |
Msa1223460 | Msa1261470 | 0.816025 | 6.840233e-52 | -8.615850e-47 |
Msa0490350 | Msa1261470 | 0.802758 | 4.819806e-49 | -8.615850e-47 |
Msa0500360 | Msa1261470 | 0.817116 | 3.896239e-52 | -8.615850e-47 |
Msa0505390 | Msa1261470 | 0.812987 | 3.214496e-51 | -8.615850e-47 |
Msa0516450 | Msa1261470 | 0.839354 | 1.666599e-57 | -8.615850e-47 |
Msa0517340 | Msa1261470 | 0.817096 | 3.936934e-52 | -8.615850e-47 |
Msa0518040 | Msa1261470 | 0.813411 | 2.594191e-51 | -8.615850e-47 |
Msa0524050 | Msa1261470 | 0.806522 | 7.896137e-50 | -8.615850e-47 |
Msa0524120 | Msa1261470 | 0.809181 | 2.148271e-50 | -8.615850e-47 |
Msa0524890 | Msa1261470 | -0.829092 | 6.246582e-55 | -8.615850e-47 |
Msa0526640 | Msa1261470 | -0.835849 | 1.320807e-56 | -8.615850e-47 |
Msa0527600 | Msa1261470 | 0.810666 | 1.029107e-50 | -8.615850e-47 |
Msa0535030 | Msa1261470 | 0.804446 | 2.152359e-49 | -8.615850e-47 |
Msa0535060 | Msa1261470 | 0.812669 | 3.773326e-51 | -8.615850e-47 |
Msa0540070 | Msa1261470 | 0.836374 | 9.715875e-57 | -8.615850e-47 |
Msa0542010 | Msa1261470 | 0.816255 | 6.076252e-52 | -8.615850e-47 |
Msa0543900 | Msa1261470 | 0.808917 | 2.446377e-50 | -8.615850e-47 |
Msa0553460 | Msa1261470 | 0.801533 | 8.608776e-49 | -8.615850e-47 |
Msa0557680 | Msa1261470 | 0.809206 | 2.121420e-50 | -8.615850e-47 |
Msa0564930 | Msa1261470 | 0.827676 | 1.371378e-54 | -8.615850e-47 |
Msa0574170 | Msa1261470 | 0.815190 | 1.049568e-51 | -8.615850e-47 |
Msa0577230 | Msa1261470 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
Msa0583740 | Msa1261470 | 0.814249 | 1.695945e-51 | -8.615850e-47 |
Msa0599770 | Msa1261470 | 0.804209 | 2.411019e-49 | -8.615850e-47 |
Msa0843280 | Msa1261470 | 0.835807 | 1.353396e-56 | -8.615850e-47 |
Msa0847200 | Msa1261470 | 0.839481 | 1.544533e-57 | -8.615850e-47 |
Msa0853540 | Msa1261470 | 0.810884 | 9.231386e-51 | -8.615850e-47 |
Msa0863250 | Msa1261470 | 0.803029 | 4.235544e-49 | -8.615850e-47 |
Msa0863770 | Msa1261470 | 0.821693 | 3.524708e-53 | -8.615850e-47 |
Msa0864690 | Msa1261470 | 0.821080 | 4.883024e-53 | -8.615850e-47 |
Msa0890250 | Msa1261470 | 0.812733 | 3.654826e-51 | -8.615850e-47 |
Msa0902980 | Msa1261470 | 0.822847 | 1.902876e-53 | -8.615850e-47 |
Msa0903730 | Msa1261470 | 0.811428 | 7.036423e-51 | -8.615850e-47 |
Msa0909710 | Msa1261470 | 0.850018 | 2.226656e-60 | -8.615850e-47 |
Msa0937940 | Msa1261470 | 0.808143 | 3.580464e-50 | -8.615850e-47 |
Msa0938420 | Msa1261470 | 0.807684 | 4.481991e-50 | -8.615850e-47 |
Msa0944770 | Msa1261470 | 0.804693 | 1.911377e-49 | -8.615850e-47 |
Msa0946120 | Msa1261470 | 0.816842 | 4.489966e-52 | -8.615850e-47 |
Msa0951720 | Msa1261470 | 0.822304 | 2.544420e-53 | -8.615850e-47 |
Msa0961420 | Msa1261470 | -0.823537 | 1.312849e-53 | -8.615850e-47 |
Msa0968320 | Msa1261470 | -0.804239 | 2.376718e-49 | -8.615850e-47 |
Msa0970050 | Msa1261470 | 0.828495 | 8.711075e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1261470 | MtrunA17_Chr4g0062931 | 93.772 | 562 | 15 | 4 | 1 | 549 | 1 | 555 | 0.0 | 854 |
Msa1261470 | MtrunA17_Chr5g0429721 | 32.911 | 79 | 52 | 1 | 5 | 82 | 34 | 112 | 1.43e-12 | 69.7 |
Msa1261470 | MtrunA17_Chr1g0210241 | 35.955 | 89 | 56 | 1 | 1 | 88 | 1 | 89 | 7.29e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1261470 | AT5G19960.1 | 42.487 | 193 | 66 | 5 | 1 | 184 | 1 | 157 | 8.00e-33 | 129 |
Msa1261470 | AT5G19960.1 | 41.379 | 116 | 66 | 1 | 425 | 540 | 221 | 334 | 1.14e-15 | 79.0 |
Msa1261470 | AT5G19960.2 | 41.379 | 116 | 66 | 1 | 425 | 540 | 133 | 246 | 6.37e-16 | 78.2 |
Msa1261470 | AT4G39260.3 | 42.857 | 84 | 47 | 1 | 9 | 91 | 8 | 91 | 6.13e-15 | 70.9 |
Msa1261470 | AT3G47120.2 | 39.474 | 76 | 45 | 1 | 5 | 79 | 34 | 109 | 3.30e-13 | 70.9 |
Msa1261470 | AT3G47120.1 | 39.474 | 76 | 45 | 1 | 5 | 79 | 34 | 109 | 5.52e-13 | 70.9 |
Find 152 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCCGTGTGGTTAAAGTTAA+TGG | 0.201362 | 8_2:-63843788 | Msa1261470:CDS |
GTTATGAATCAGACTATTAA+TGG | 0.247320 | 8_2:-63843809 | Msa1261470:intron |
GGTGGTGGCAGATCAAATTT+TGG | 0.252328 | 8_2:-63843734 | Msa1261470:CDS |
CGCACTGTCTTCAATTTGTA+TGG | 0.310277 | 8_2:-63844198 | Msa1261470:CDS |
GGGAAGACCACCAACGTAAA+TGG | 0.322442 | 8_2:+63844245 | None:intergenic |
GGTGGAGGTGGCGGTGGTGG+TGG | 0.340367 | 8_2:-63843749 | Msa1261470:CDS |
GGCGGTGGAGGTGGCGGTGG+TGG | 0.354294 | 8_2:-63843752 | Msa1261470:CDS |
CCCTATCCCTGTCACGGTCT+CGG | 0.354327 | 8_2:+63843402 | None:intergenic |
CATTACCATGATCATAATCT+TGG | 0.358631 | 8_2:+63843627 | None:intergenic |
TGAAGTAGTAAATATCAATT+TGG | 0.359952 | 8_2:-63844386 | None:intergenic |
CCCTATCCCTATCATGGTCT+CGG | 0.372822 | 8_2:+63843309 | None:intergenic |
GTGAGGTCTCGTGGCGGTGG+AGG | 0.372910 | 8_2:-63843764 | Msa1261470:CDS |
ATTGGAATCATGACGGTGAT+AGG | 0.374936 | 8_2:-63842941 | Msa1261470:CDS |
CTTAAAATAAATTTAGCATA+TGG | 0.379102 | 8_2:-63840471 | Msa1261470:three_prime_UTR |
TCCTATCTCTGTCACGGTCT+CGG | 0.379142 | 8_2:+63843123 | None:intergenic |
TGTATGGTAAGATTCATCTT+TGG | 0.384035 | 8_2:-63840593 | Msa1261470:three_prime_UTR |
ATAGGTCTCGAGACCATGAT+AGG | 0.390177 | 8_2:-63843502 | Msa1261470:CDS |
CCCTGTCACGGTCACGGTCT+CGG | 0.400331 | 8_2:+63843216 | None:intergenic |
CTTACAAATGGAAGTCTAGA+TGG | 0.403989 | 8_2:-63840721 | Msa1261470:CDS |
AGGTCTCGTGGCGGTGGAGG+TGG | 0.410261 | 8_2:-63843761 | Msa1261470:CDS |
ATGATGAAAGGAATGGAGAT+TGG | 0.413487 | 8_2:-63843682 | Msa1261470:CDS |
CCTGTCACGGTCACGGTCTC+GGG | 0.417238 | 8_2:+63843217 | None:intergenic |
ATAGATCCCGAGACCATGAT+AGG | 0.418281 | 8_2:-63843316 | Msa1261470:CDS |
GCCGTGTGGTTAAAGTTAAT+GGG | 0.420536 | 8_2:-63843787 | Msa1261470:CDS |
AAAGCGCGTTAGACCGTGAT+AGG | 0.422370 | 8_2:-63843241 | Msa1261470:CDS |
AAGATTATAGCACTGCTTGT+TGG | 0.425567 | 8_2:+63840520 | None:intergenic |
CGTGGCGGTGGAGGTGGCGG+TGG | 0.426158 | 8_2:-63843755 | Msa1261470:CDS |
AGAAAGAAGACTTAATGTTA+TGG | 0.428868 | 8_2:-63842085 | Msa1261470:CDS |
AAAGCATGTTAGATGATGAT+TGG | 0.430802 | 8_2:-63842959 | Msa1261470:CDS |
TTAGCATATGGCATCTTACC+TGG | 0.431591 | 8_2:-63840459 | Msa1261470:three_prime_UTR |
CCCGAGACCGTGACCGTGAC+AGG | 0.432306 | 8_2:-63843217 | Msa1261470:CDS |
TTCTAAGCTGGAAGAGGGAT+TGG | 0.434291 | 8_2:-63842109 | Msa1261470:CDS |
TTCTATCCCTATCCCTATCA+TGG | 0.434809 | 8_2:+63843489 | None:intergenic |
TTACCTTGGTCAACTGCATC+TGG | 0.438734 | 8_2:+63841878 | None:intergenic |
TCTCGTGGCGGTGGAGGTGG+CGG | 0.438886 | 8_2:-63843758 | Msa1261470:CDS |
CCTATCCCTGTCACGGTCTC+GGG | 0.441091 | 8_2:+63843403 | None:intergenic |
CAAGCTAGAGCAAGTATGTT+AGG | 0.441748 | 8_2:-63843344 | Msa1261470:CDS |
GGTGATGGTGATGGTGGTCT+TGG | 0.448887 | 8_2:-63840748 | Msa1261470:CDS |
ATCAATGACCAACGTACACT+TGG | 0.451190 | 8_2:-63844016 | Msa1261470:CDS |
CCTATCTCTGTCACGGTCTC+GGG | 0.453975 | 8_2:+63843124 | None:intergenic |
AAAGCATGTTAGTCCGTGAT+AGG | 0.455542 | 8_2:-63843427 | Msa1261470:CDS |
AACCATGATGTCACGGTCTC+GGG | 0.456700 | 8_2:+63843031 | None:intergenic |
GGGGTGAGGTCTCGTGGCGG+TGG | 0.457192 | 8_2:-63843767 | Msa1261470:CDS |
GGAGTTACAAAAGCACTCTA+AGG | 0.459318 | 8_2:-63842064 | Msa1261470:intron |
GAGACCGTGACATCATGGTT+AGG | 0.463473 | 8_2:-63843028 | Msa1261470:CDS |
TGATAGGGCTGAAAATGAAC+TGG | 0.463823 | 8_2:-63842925 | Msa1261470:CDS |
TGATGAAAGGAATGGAGATT+GGG | 0.465545 | 8_2:-63843681 | Msa1261470:CDS |
CTCATCATTGTGGTCCCCAT+TGG | 0.467282 | 8_2:+63842625 | None:intergenic |
CCCGAGACCGTGACAGAGAT+AGG | 0.470681 | 8_2:-63843124 | Msa1261470:CDS |
CGAGACCAAGATTATGATCA+TGG | 0.478575 | 8_2:-63843632 | Msa1261470:CDS |
AGAGGTCTCGAGACCGTGAT+AGG | 0.480387 | 8_2:-63843538 | Msa1261470:CDS |
GTAATGAGAAAGATGGATAC+AGG | 0.480470 | 8_2:-63843610 | Msa1261470:CDS |
AAAGATGGATACAGGAATAG+AGG | 0.481913 | 8_2:-63843602 | Msa1261470:CDS |
ACAGGAATAGAGGCAGTGAT+TGG | 0.482052 | 8_2:-63843592 | Msa1261470:CDS |
ATAGTCCATCAGATTCCAAT+GGG | 0.482340 | 8_2:-63842640 | Msa1261470:CDS |
TTCTATCCCTATCCCTATCA+TGG | 0.483071 | 8_2:+63843303 | None:intergenic |
CCCGAGACCGTGACAGGGAT+AGG | 0.483596 | 8_2:-63843403 | Msa1261470:CDS |
TGTTTCATCAGTGGCGTCGA+AGG | 0.487655 | 8_2:+63844224 | None:intergenic |
ACTGGAAAACAGCAGGGTAC+AGG | 0.494266 | 8_2:-63842907 | Msa1261470:CDS |
ATAGGTCCCGAGACCGTGAC+AGG | 0.495188 | 8_2:-63843409 | Msa1261470:CDS |
TCGAGTCCAATCACCACCTC+TGG | 0.499545 | 8_2:+63843568 | None:intergenic |
ATTGGACCAGAGGTGGTGAT+TGG | 0.502244 | 8_2:-63843574 | Msa1261470:CDS |
TAACCATGATGTCACGGTCT+CGG | 0.507957 | 8_2:+63843030 | None:intergenic |
GGTCTTGGACAACTTACAAA+TGG | 0.508402 | 8_2:-63840733 | Msa1261470:CDS |
ACAGGGTGGAGATGTGGATA+AGG | 0.508614 | 8_2:-63842889 | Msa1261470:CDS |
CCTATCCCTATCATGGTCTC+GGG | 0.509297 | 8_2:+63843310 | None:intergenic |
AGACCGTGACATCATGGTTA+GGG | 0.509461 | 8_2:-63843027 | Msa1261470:CDS |
CATCATAATGATGAAAGGAA+TGG | 0.517662 | 8_2:-63843689 | Msa1261470:CDS |
CCCGAGACCATGATAGGGAT+AGG | 0.517941 | 8_2:-63843310 | Msa1261470:CDS |
CACGGTCTCGGGACCTATCA+CGG | 0.518091 | 8_2:+63843228 | None:intergenic |
AAAATGAACTGGAAAACAGC+AGG | 0.521165 | 8_2:-63842914 | Msa1261470:CDS |
CTCGAGACCATGATAGGGAT+AGG | 0.523344 | 8_2:-63843496 | Msa1261470:CDS |
TTGTAACTTTCACAAACCCT+AGG | 0.525397 | 8_2:-63843979 | Msa1261470:CDS |
TAGCATCAATTGCAGACCTA+GGG | 0.528965 | 8_2:+63843963 | None:intergenic |
CACGGTCTCGGGACCTATCA+CGG | 0.531377 | 8_2:+63843414 | None:intergenic |
GATAGCTCCATTTACGTTGG+TGG | 0.531498 | 8_2:-63844252 | Msa1261470:CDS |
GATCATGGTAATGAGAAAGA+TGG | 0.531558 | 8_2:-63843617 | Msa1261470:CDS |
TATCTCACTAGCTCCATGTA+TGG | 0.533587 | 8_2:-63840609 | Msa1261470:three_prime_UTR |
CTGGATCCACATCTAAGTTA+CGG | 0.535060 | 8_2:+63842865 | None:intergenic |
TCAGGTTTCTAAGCTGGAAG+AGG | 0.536137 | 8_2:-63842115 | Msa1261470:intron |
CCGAGACCGTGACAGGGATA+GGG | 0.537071 | 8_2:-63843402 | Msa1261470:CDS |
AGAGTGAAGGAGAAAGACTA+TGG | 0.541578 | 8_2:-63844354 | Msa1261470:five_prime_UTR |
CTCGAGACCTATCACGGTCG+CGG | 0.542402 | 8_2:+63843513 | None:intergenic |
CTGGAAAACAGCAGGGTACA+GGG | 0.545302 | 8_2:-63842906 | Msa1261470:CDS |
CAGGTTTCTAAGCTGGAAGA+GGG | 0.546464 | 8_2:-63842114 | Msa1261470:CDS |
AGAAGAGTTGAGCATTTGCA+AGG | 0.546715 | 8_2:-63843098 | Msa1261470:CDS |
AAGATGAATCTTACCATACA+TGG | 0.547436 | 8_2:+63840596 | None:intergenic |
GTCCCGAGACCGTGACATCA+TGG | 0.550463 | 8_2:-63843033 | Msa1261470:CDS |
ATAGCATCAATTGCAGACCT+AGG | 0.550720 | 8_2:+63843962 | None:intergenic |
GACTACCTTGACATCAAGAA+TGG | 0.552219 | 8_2:+63844173 | None:intergenic |
TTATACCCCTGTCACGGTCA+CGG | 0.557856 | 8_2:+63843210 | None:intergenic |
CCGAGACCATGATAGGGATA+GGG | 0.559495 | 8_2:-63843309 | Msa1261470:CDS |
CCCCATTAACTTTAACCACA+CGG | 0.561289 | 8_2:+63843786 | None:intergenic |
GAGCATATGCAAAATTATGA+TGG | 0.562214 | 8_2:-63843461 | Msa1261470:CDS |
CAGGGTACAGGGTGGAGATG+TGG | 0.563252 | 8_2:-63842895 | Msa1261470:CDS |
GAAAGCATGTTAGATCGTGA+TGG | 0.563810 | 8_2:-63843149 | Msa1261470:CDS |
AAAGCATGTTAGACCGCGAT+GGG | 0.565934 | 8_2:-63843055 | Msa1261470:CDS |
TTCTATCCCTATCCCTGTCA+CGG | 0.566463 | 8_2:+63843396 | None:intergenic |
GAACACATGCTAGATTATGA+TGG | 0.568841 | 8_2:-63843368 | Msa1261470:CDS |
GAAATTCATACTATATTGTG+CGG | 0.571168 | 8_2:-63840562 | Msa1261470:three_prime_UTR |
TGGTCCCCATTGGAATCTGA+TGG | 0.575643 | 8_2:+63842635 | None:intergenic |
GTTTCATCAGTGGCGTCGAA+GGG | 0.576277 | 8_2:+63844225 | None:intergenic |
TGGTTAAAGTTAATGGGGTG+AGG | 0.576628 | 8_2:-63843781 | Msa1261470:CDS |
TCTTACTCGATGTTTCTCCT+CGG | 0.578233 | 8_2:+63842780 | None:intergenic |
ATTATCATCATAATGATGAA+AGG | 0.578991 | 8_2:-63843694 | Msa1261470:CDS |
AATAGTCCATCAGATTCCAA+TGG | 0.582473 | 8_2:-63842641 | Msa1261470:CDS |
AGGAATGGAGATTGGGATCG+TGG | 0.582856 | 8_2:-63843674 | Msa1261470:CDS |
TCGAGACCATGATAGGGATA+GGG | 0.583018 | 8_2:-63843495 | Msa1261470:CDS |
GAAAGCATGTTAGACCGCGA+TGG | 0.583363 | 8_2:-63843056 | Msa1261470:CDS |
TTCTACTCCTATCTCTGTCA+CGG | 0.583559 | 8_2:+63843117 | None:intergenic |
TAGCATATGGCATCTTACCT+GGG | 0.588864 | 8_2:-63840458 | Msa1261470:three_prime_UTR |
TGGCGCCATTCTTGATGTCA+AGG | 0.589109 | 8_2:-63844178 | Msa1261470:intron |
CATGGTCTCGAGACCTATCA+CGG | 0.589442 | 8_2:+63843507 | None:intergenic |
GTTAATGGGGTGAGGTCTCG+TGG | 0.592393 | 8_2:-63843773 | Msa1261470:CDS |
TTGGAATCATGACGGTGATA+GGG | 0.593640 | 8_2:-63842940 | Msa1261470:CDS |
GGCAGTGATTGGACCAGAGG+TGG | 0.596616 | 8_2:-63843581 | Msa1261470:CDS |
CCGAGACCGTGACCGTGACA+GGG | 0.596911 | 8_2:-63843216 | Msa1261470:CDS |
AAAGCATGTTAGATCGTGAT+GGG | 0.597103 | 8_2:-63843148 | Msa1261470:CDS |
ATTGGACTCGACAGCATCAG+AGG | 0.597239 | 8_2:-63843556 | Msa1261470:CDS |
GAGAGTGACGGTGATGGTGA+TGG | 0.598421 | 8_2:-63840757 | Msa1261470:CDS |
TTGTCTCTTTAATTGCCTAG+TGG | 0.600658 | 8_2:-63840639 | Msa1261470:three_prime_UTR |
TCAATGACCAACGTACACTT+GGG | 0.603480 | 8_2:-63844015 | Msa1261470:CDS |
TCAATATTGTTCGAGAGTGA+CGG | 0.605658 | 8_2:-63840769 | Msa1261470:CDS |
TAGATCCCGAGACCATGATA+GGG | 0.613104 | 8_2:-63843315 | Msa1261470:CDS |
AGTGCGAATTGTTTCATCAG+TGG | 0.616718 | 8_2:+63844215 | None:intergenic |
TAAGGACCGTAACTTAGATG+TGG | 0.622168 | 8_2:-63842871 | Msa1261470:CDS |
TCAGTTCCACAAAATGACAC+TGG | 0.624699 | 8_2:-63844280 | Msa1261470:exon |
AGAGGCAGTGATTGGACCAG+AGG | 0.630012 | 8_2:-63843584 | Msa1261470:CDS |
AGCATTTCCCAAGTGTACGT+TGG | 0.632194 | 8_2:+63844008 | None:intergenic |
GATGCTATCAACGATATGAA+CGG | 0.633466 | 8_2:-63843947 | Msa1261470:CDS |
TATCCCTAACCATGATGTCA+CGG | 0.634194 | 8_2:+63843024 | None:intergenic |
ATCACATTACCTCATCATTG+TGG | 0.638871 | 8_2:+63842615 | None:intergenic |
TAGGTCTCGAGACCATGATA+GGG | 0.644021 | 8_2:-63843501 | Msa1261470:CDS |
CACGGTCTCGGGACCCATCG+CGG | 0.649874 | 8_2:+63843042 | None:intergenic |
AGTGACGGTGATGGTGATGG+TGG | 0.650592 | 8_2:-63840754 | Msa1261470:CDS |
GATGATAGCTCCATTTACGT+TGG | 0.659955 | 8_2:-63844255 | Msa1261470:CDS |
AGGTAGAAGATGAATTAGAG+AGG | 0.662402 | 8_2:-63842458 | Msa1261470:CDS |
CGAGACCGTGACCGTGACAG+GGG | 0.664208 | 8_2:-63843215 | Msa1261470:CDS |
CAATGGGGACCACAATGATG+AGG | 0.667084 | 8_2:-63842624 | Msa1261470:intron |
TCGCCAGATGCAGTTGACCA+AGG | 0.667948 | 8_2:-63841881 | Msa1261470:intron |
TTGTTCGAGAGTGACGGTGA+TGG | 0.673128 | 8_2:-63840763 | Msa1261470:CDS |
AAATGAACTGGAAAACAGCA+GGG | 0.689851 | 8_2:-63842913 | Msa1261470:CDS |
ATATTTACCGCAGAAACGGG+AGG | 0.695680 | 8_2:-63841938 | Msa1261470:intron |
AATGGGGTGAGGTCTCGTGG+CGG | 0.699964 | 8_2:-63843770 | Msa1261470:CDS |
GATGATGATTGGAATCATGA+CGG | 0.709264 | 8_2:-63842948 | Msa1261470:CDS |
TAGGTCCCGAGACCGTGACA+GGG | 0.714552 | 8_2:-63843408 | Msa1261470:CDS |
CCGTGTGGTTAAAGTTAATG+GGG | 0.715692 | 8_2:-63843786 | Msa1261470:CDS |
TCAGACTATTAATGGCCGTG+TGG | 0.721965 | 8_2:-63843801 | Msa1261470:intron |
AATGGAGATTGGGATCGTGG+CGG | 0.727702 | 8_2:-63843671 | Msa1261470:CDS |
GCAATTAAAGAGACAACACA+TGG | 0.728798 | 8_2:+63840646 | None:intergenic |
GAAAACAGCAGGGTACAGGG+TGG | 0.744053 | 8_2:-63842903 | Msa1261470:CDS |
TAGTCCATCAGATTCCAATG+GGG | 0.775487 | 8_2:-63842639 | Msa1261470:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAATTAAATAATTAACAA+GGG | + | chr8_2:63840665-63840684 | None:intergenic | 10.0% |
!! | AAGAAATTAAATAATTAACA+AGG | + | chr8_2:63840666-63840685 | None:intergenic | 10.0% |
!! | TAATAATCAATTCAAGTAAT+TGG | - | chr8_2:63840690-63840709 | Msa1261470:three_prime_UTR | 15.0% |
!! | AATAATCAATTCAAGTAATT+GGG | - | chr8_2:63840691-63840710 | Msa1261470:three_prime_UTR | 15.0% |
!! | AAACTAAAATGAATGAATAA+TGG | - | chr8_2:63842390-63842409 | Msa1261470:intron | 15.0% |
!! | TTATCAAACATTCAAATATT+GGG | + | chr8_2:63842525-63842544 | None:intergenic | 15.0% |
!! | TTTATCAAACATTCAAATAT+TGG | + | chr8_2:63842526-63842545 | None:intergenic | 15.0% |
!!! | AAATATAACTTTTTGGAAAA+GGG | + | chr8_2:63843383-63843402 | None:intergenic | 15.0% |
!!! | AAAATATAACTTTTTGGAAA+AGG | + | chr8_2:63843384-63843403 | None:intergenic | 15.0% |
!! | CTTAAAATAAATTTAGCATA+TGG | - | chr8_2:63844305-63844324 | Msa1261470:five_prime_UTR | 15.0% |
!! | AGTTTATTTGTGTTAATGTT+TGG | - | chr8_2:63840890-63840909 | Msa1261470:intron | 20.0% |
!! | ATTATCATCATAATGATGAA+AGG | - | chr8_2:63841082-63841101 | Msa1261470:intron | 20.0% |
!!! | ATAATGGAAATTTGTCAATA+TGG | - | chr8_2:63842406-63842425 | Msa1261470:intron | 20.0% |
!! | TAAATGATATTGCTAACATT+GGG | - | chr8_2:63842958-63842977 | Msa1261470:CDS | 20.0% |
!! | TAAACATTATAAAAAGTCAC+AGG | + | chr8_2:63843126-63843145 | None:intergenic | 20.0% |
!!! | AATATAACTTTTTGGAAAAG+GGG | + | chr8_2:63843382-63843401 | None:intergenic | 20.0% |
!!! | TTGATTTTCTAATCATTCAT+AGG | + | chr8_2:63843572-63843591 | None:intergenic | 20.0% |
!! | AAACATTGCTTAAAATAATG+TGG | + | chr8_2:63843597-63843616 | None:intergenic | 20.0% |
!!! | AAGAAATTTTTAATCAATCC+AGG | + | chr8_2:63844365-63844384 | None:intergenic | 20.0% |
! | GTTATGAATCAGACTATTAA+TGG | - | chr8_2:63840967-63840986 | Msa1261470:intron | 25.0% |
!! | ATCATAATTTTGCATATGCT+CGG | + | chr8_2:63841316-63841335 | None:intergenic | 25.0% |
! | ATGTCACAGAAAATTAACAT+TGG | + | chr8_2:63842025-63842044 | None:intergenic | 25.0% |
! | AGAAAGAAGACTTAATGTTA+TGG | - | chr8_2:63842691-63842710 | Msa1261470:intron | 25.0% |
! | TTAAAACTTAGACATTACCT+TGG | + | chr8_2:63842915-63842934 | None:intergenic | 25.0% |
! | GTAAATGATATTGCTAACAT+TGG | - | chr8_2:63842957-63842976 | Msa1261470:CDS | 25.0% |
! | ATATATATAAGACACAAACC+TGG | + | chr8_2:63843069-63843088 | None:intergenic | 25.0% |
! | AATGTTTAAATCTCACAATG+TGG | - | chr8_2:63843138-63843157 | Msa1261470:CDS | 25.0% |
! | TATATCGTCAACATAATTCA+AGG | + | chr8_2:63843284-63843303 | None:intergenic | 25.0% |
! | GACGATATAGAATCATTATA+TGG | - | chr8_2:63843295-63843314 | Msa1261470:CDS | 25.0% |
!! | CCATGGAAAATATAACTTTT+TGG | + | chr8_2:63843390-63843409 | None:intergenic | 25.0% |
!! | CCAAAAAGTTATATTTTCCA+TGG | - | chr8_2:63843387-63843406 | Msa1261470:CDS | 25.0% |
! | TAATTTCAGAGATATTTCCA+TGG | + | chr8_2:63843407-63843426 | None:intergenic | 25.0% |
! | CATTAATTAAGCTCCATAAA+GGG | - | chr8_2:63843618-63843637 | Msa1261470:CDS | 25.0% |
! | ATTAATTAAGCTCCATAAAG+GGG | - | chr8_2:63843619-63843638 | Msa1261470:CDS | 25.0% |
!!! | TTTTATTTTAGACCCCTTTA+TGG | + | chr8_2:63843634-63843653 | None:intergenic | 25.0% |
! | AAGAAAAACAAGAAATAAGC+TGG | + | chr8_2:63843909-63843928 | None:intergenic | 25.0% |
!! | TATGCTGAGTTAATTTTTGT+TGG | - | chr8_2:63843965-63843984 | Msa1261470:CDS | 25.0% |
!! | TTTCATACTTTTGGTATTTC+TGG | + | chr8_2:63844099-63844118 | None:intergenic | 25.0% |
!! | CAAAAATGGTTTCATACTTT+TGG | + | chr8_2:63844108-63844127 | None:intergenic | 25.0% |
! | GAAATTCATACTATATTGTG+CGG | - | chr8_2:63844214-63844233 | Msa1261470:CDS | 25.0% |
AAACTCTCAAATCATAACCA+CGG | + | chr8_2:63840930-63840949 | None:intergenic | 30.0% | |
! | GGTTATGATTTGAGAGTTTT+TGG | - | chr8_2:63840931-63840950 | Msa1261470:intron | 30.0% |
CATCATAATGATGAAAGGAA+TGG | - | chr8_2:63841087-63841106 | Msa1261470:intron | 30.0% | |
CATTACCATGATCATAATCT+TGG | + | chr8_2:63841152-63841171 | None:intergenic | 30.0% | |
GAGCATATGCAAAATTATGA+TGG | - | chr8_2:63841315-63841334 | Msa1261470:intron | 30.0% | |
AAAGCATGTTAGATGATGAT+TGG | - | chr8_2:63841817-63841836 | Msa1261470:intron | 30.0% | |
! | TGTTCGTCAAAACTTTTATC+AGG | + | chr8_2:63841963-63841982 | None:intergenic | 30.0% |
AACATAAAAAAGAACAACCG+AGG | - | chr8_2:63841979-63841998 | Msa1261470:intron | 30.0% | |
GTTAATTTCCAACTGTTCTT+TGG | - | chr8_2:63842047-63842066 | Msa1261470:intron | 30.0% | |
TAAGTAAACCAAAGAACAGT+TGG | + | chr8_2:63842058-63842077 | None:intergenic | 30.0% | |
!!! | CTTGTTTTTACTTGCTTTTG+TGG | - | chr8_2:63842290-63842309 | Msa1261470:intron | 30.0% |
ACTGCTTGATCAACTAAAAA+AGG | - | chr8_2:63842349-63842368 | Msa1261470:intron | 30.0% | |
GAATGTTTGATAAATGCGTT+AGG | - | chr8_2:63842532-63842551 | Msa1261470:intron | 30.0% | |
! | TTTTCTCCTCTTTTATGTGT+TGG | - | chr8_2:63842615-63842634 | Msa1261470:intron | 30.0% |
ATGCTTGGAAATAAATGAGA+AGG | + | chr8_2:63842740-63842759 | None:intergenic | 30.0% | |
CAATCTCAAAATTTGATGCT+TGG | + | chr8_2:63842755-63842774 | None:intergenic | 30.0% | |
!! | TTCTCTTTAAAGTGTTAGCA+CGG | - | chr8_2:63843454-63843473 | Msa1261470:CDS | 30.0% |
GAAAATCAATTGCATGTCAT+TGG | + | chr8_2:63843497-63843516 | None:intergenic | 30.0% | |
CCTTTATGGAGCTTAATTAA+TGG | + | chr8_2:63843620-63843639 | None:intergenic | 30.0% | |
CCATTAATTAAGCTCCATAA+AGG | - | chr8_2:63843617-63843636 | Msa1261470:CDS | 30.0% | |
!!! | TTTTTTGCCACCATAATCTA+TGG | + | chr8_2:63843667-63843686 | None:intergenic | 30.0% |
AGATTATGGTGGCAAAAAAT+TGG | - | chr8_2:63843668-63843687 | Msa1261470:CDS | 30.0% | |
GAAATGCAAAAGTAGCTATT+AGG | - | chr8_2:63843725-63843744 | Msa1261470:CDS | 30.0% | |
! | AAGTGAATTCCTTGTTATCA+AGG | - | chr8_2:63843748-63843767 | Msa1261470:CDS | 30.0% |
! | ATTCCTTGTTATCAAGGAAA+TGG | - | chr8_2:63843754-63843773 | Msa1261470:CDS | 30.0% |
! | TTGATTTGACCTTGTGAATA+TGG | - | chr8_2:63843831-63843850 | Msa1261470:intron | 30.0% |
AAACCAATACCATATTCACA+AGG | + | chr8_2:63843843-63843862 | None:intergenic | 30.0% | |
!! | TTGTGAATATGGTATTGGTT+TGG | - | chr8_2:63843842-63843861 | Msa1261470:intron | 30.0% |
CAAGAAATAAGCTGGATTAT+AGG | + | chr8_2:63843901-63843920 | None:intergenic | 30.0% | |
!!! | GTTAATTTTTGTTGGTTTGC+AGG | - | chr8_2:63843973-63843992 | Msa1261470:CDS | 30.0% |
AAGATGAATCTTACCATACA+TGG | + | chr8_2:63844183-63844202 | None:intergenic | 30.0% | |
TGTATGGTAAGATTCATCTT+TGG | - | chr8_2:63844183-63844202 | Msa1261470:CDS | 30.0% | |
TTGGAAGAGAAAAAGAGTGA+AGG | - | chr8_2:63840409-63840428 | Msa1261470:three_prime_UTR | 35.0% | |
TTGTAACTTTCACAAACCCT+AGG | - | chr8_2:63840797-63840816 | Msa1261470:intron | 35.0% | |
GATGCTATCAACGATATGAA+CGG | - | chr8_2:63840829-63840848 | Msa1261470:intron | 35.0% | |
ATGATGAAAGGAATGGAGAT+TGG | - | chr8_2:63841094-63841113 | Msa1261470:intron | 35.0% | |
TGATGAAAGGAATGGAGATT+GGG | - | chr8_2:63841095-63841114 | Msa1261470:intron | 35.0% | |
! | GATCATGGTAATGAGAAAGA+TGG | - | chr8_2:63841159-63841178 | Msa1261470:intron | 35.0% |
GTAATGAGAAAGATGGATAC+AGG | - | chr8_2:63841166-63841185 | Msa1261470:intron | 35.0% | |
AAAGATGGATACAGGAATAG+AGG | - | chr8_2:63841174-63841193 | Msa1261470:intron | 35.0% | |
GAACACATGCTAGATTATGA+TGG | - | chr8_2:63841408-63841427 | Msa1261470:intron | 35.0% | |
AAAGCATGTTAGATCGTGAT+GGG | - | chr8_2:63841628-63841647 | Msa1261470:intron | 35.0% | |
GATGATGATTGGAATCATGA+CGG | - | chr8_2:63841828-63841847 | Msa1261470:intron | 35.0% | |
AAAATGAACTGGAAAACAGC+AGG | - | chr8_2:63841862-63841881 | Msa1261470:intron | 35.0% | |
AAATGAACTGGAAAACAGCA+GGG | - | chr8_2:63841863-63841882 | Msa1261470:intron | 35.0% | |
ATCCAGACAAAAAGATGGAT+AGG | - | chr8_2:63841928-63841947 | Msa1261470:CDS | 35.0% | |
! | ATCCTATCCATCTTTTTGTC+TGG | + | chr8_2:63841933-63841952 | None:intergenic | 35.0% |
ATTCAAACTGCAGGAAAATC+AGG | + | chr8_2:63842103-63842122 | None:intergenic | 35.0% | |
ATTTGTCACATTCAAACTGC+AGG | + | chr8_2:63842112-63842131 | None:intergenic | 35.0% | |
AATAGTCCATCAGATTCCAA+TGG | - | chr8_2:63842135-63842154 | Msa1261470:intron | 35.0% | |
ATAGTCCATCAGATTCCAAT+GGG | - | chr8_2:63842136-63842155 | Msa1261470:intron | 35.0% | |
ATCACATTACCTCATCATTG+TGG | + | chr8_2:63842164-63842183 | None:intergenic | 35.0% | |
! | AAATAAACCGAGACTGATTC+TGG | - | chr8_2:63842256-63842275 | Msa1261470:intron | 35.0% |
AGGTAGAAGATGAATTAGAG+AGG | - | chr8_2:63842318-63842337 | Msa1261470:intron | 35.0% | |
GCTTGATCAACTAAAAAAGG+AGG | - | chr8_2:63842352-63842371 | Msa1261470:intron | 35.0% | |
TCTGAACATGTGCATTTCAA+AGG | - | chr8_2:63842496-63842515 | Msa1261470:intron | 35.0% | |
! | TTAAAGATTAGAGCGCTTGT+TGG | + | chr8_2:63842587-63842606 | None:intergenic | 35.0% |
! | CTGAAAAGTGGAATTTTGTC+AGG | - | chr8_2:63842643-63842662 | Msa1261470:CDS | 35.0% |
! | ATTTTGTCAGGTTTCTAAGC+TGG | - | chr8_2:63842655-63842674 | Msa1261470:CDS | 35.0% |
TGTGTTCAAAGTAAGGATGT+TGG | + | chr8_2:63842790-63842809 | None:intergenic | 35.0% | |
! | CAGCTTTTGTGTTCAAAGTA+AGG | + | chr8_2:63842797-63842816 | None:intergenic | 35.0% |
GAAGATATTTACCGCAGAAA+CGG | - | chr8_2:63842834-63842853 | Msa1261470:CDS | 35.0% | |
AAGATATTTACCGCAGAAAC+GGG | - | chr8_2:63842835-63842854 | Msa1261470:CDS | 35.0% | |
ATATTGCTAACATTGGGCTT+GGG | - | chr8_2:63842964-63842983 | Msa1261470:CDS | 35.0% | |
!!! | ACTGGTTTTAAGTCTTTCTG+TGG | + | chr8_2:63843035-63843054 | None:intergenic | 35.0% |
TAAATCTCACAATGTGGCTT+AGG | - | chr8_2:63843144-63843163 | Msa1261470:CDS | 35.0% | |
! | GAAAATTCTCTGCAGTTTTG+TGG | - | chr8_2:63843211-63843230 | Msa1261470:CDS | 35.0% |
!! | TCTCTTTAAAGTGTTAGCAC+GGG | - | chr8_2:63843455-63843474 | Msa1261470:CDS | 35.0% |
CCATAATCTATGGCATAAGA+TGG | + | chr8_2:63843657-63843676 | None:intergenic | 35.0% | |
CCATCTTATGCCATAGATTA+TGG | - | chr8_2:63843654-63843673 | Msa1261470:CDS | 35.0% | |
TCTTATGCCATAGATTATGG+TGG | - | chr8_2:63843657-63843676 | Msa1261470:CDS | 35.0% | |
AGAGATCTTTCAAATCTCAG+GGG | + | chr8_2:63843793-63843812 | None:intergenic | 35.0% | |
CAGAGATCTTTCAAATCTCA+GGG | + | chr8_2:63843794-63843813 | None:intergenic | 35.0% | |
TCAGAGATCTTTCAAATCTC+AGG | + | chr8_2:63843795-63843814 | None:intergenic | 35.0% | |
GAGATTTGAAAGATCTCTGA+TGG | - | chr8_2:63843795-63843814 | Msa1261470:CDS | 35.0% | |
TGACCTTGTGAATATGGTAT+TGG | - | chr8_2:63843837-63843856 | Msa1261470:intron | 35.0% | |
!! | CGTATTTACTTAACTTGTGC+TGG | - | chr8_2:63843937-63843956 | Msa1261470:intron | 35.0% |
TCAATATTGTTCGAGAGTGA+CGG | - | chr8_2:63844007-63844026 | Msa1261470:CDS | 35.0% | |
CTTACAAATGGAAGTCTAGA+TGG | - | chr8_2:63844055-63844074 | Msa1261470:intron | 35.0% | |
GACAACACATGGTACAAAAA+TGG | + | chr8_2:63844122-63844141 | None:intergenic | 35.0% | |
GCAATTAAAGAGACAACACA+TGG | + | chr8_2:63844133-63844152 | None:intergenic | 35.0% | |
TTGTCTCTTTAATTGCCTAG+TGG | - | chr8_2:63844137-63844156 | Msa1261470:intron | 35.0% | |
GTGAGATAGTAAAAACCACT+AGG | + | chr8_2:63844155-63844174 | None:intergenic | 35.0% | |
AAGATTATAGCACTGCTTGT+TGG | + | chr8_2:63844259-63844278 | None:intergenic | 35.0% | |
GGCTGATATGTAGAGAAAAA+AGG | - | chr8_2:63844339-63844358 | Msa1261470:five_prime_UTR | 35.0% | |
ATATGTAGAGAAAAAAGGCC+TGG | - | chr8_2:63844344-63844363 | Msa1261470:five_prime_UTR | 35.0% | |
AGAGTGAAGGAGAAAGACTA+TGG | - | chr8_2:63840422-63840441 | Msa1261470:three_prime_UTR | 40.0% | |
TCAGTTCCACAAAATGACAC+TGG | - | chr8_2:63840496-63840515 | Msa1261470:three_prime_UTR | 40.0% | |
GATGATAGCTCCATTTACGT+TGG | - | chr8_2:63840521-63840540 | Msa1261470:three_prime_UTR | 40.0% | |
AGTGCGAATTGTTTCATCAG+TGG | + | chr8_2:63840564-63840583 | None:intergenic | 40.0% | |
CGCACTGTCTTCAATTTGTA+TGG | - | chr8_2:63840578-63840597 | Msa1261470:three_prime_UTR | 40.0% | |
GACTACCTTGACATCAAGAA+TGG | + | chr8_2:63840606-63840625 | None:intergenic | 40.0% | |
ATCAATGACCAACGTACACT+TGG | - | chr8_2:63840760-63840779 | Msa1261470:CDS | 40.0% | |
TCAATGACCAACGTACACTT+GGG | - | chr8_2:63840761-63840780 | Msa1261470:CDS | 40.0% | |
TAGCATCAATTGCAGACCTA+GGG | + | chr8_2:63840816-63840835 | None:intergenic | 40.0% | |
ATAGCATCAATTGCAGACCT+AGG | + | chr8_2:63840817-63840836 | None:intergenic | 40.0% | |
TGGTAATTATTGTTGTGCCG+TGG | - | chr8_2:63840910-63840929 | Msa1261470:intron | 40.0% | |
GCCGTGTGGTTAAAGTTAAT+GGG | - | chr8_2:63840989-63841008 | Msa1261470:intron | 40.0% | |
CCCCATTAACTTTAACCACA+CGG | + | chr8_2:63840993-63841012 | None:intergenic | 40.0% | |
CCGTGTGGTTAAAGTTAATG+GGG | - | chr8_2:63840990-63841009 | Msa1261470:intron | 40.0% | |
TGGTTAAAGTTAATGGGGTG+AGG | - | chr8_2:63840995-63841014 | Msa1261470:intron | 40.0% | |
! | GTGGTGGCAGATCAAATTTT+GGG | - | chr8_2:63841043-63841062 | Msa1261470:intron | 40.0% |
CGAGACCAAGATTATGATCA+TGG | - | chr8_2:63841144-63841163 | Msa1261470:intron | 40.0% | |
TTCTATCCCTATCCCTATCA+TGG | + | chr8_2:63841290-63841309 | None:intergenic | 40.0% | |
AAAGCATGTTAGTCCGTGAT+AGG | - | chr8_2:63841349-63841368 | Msa1261470:intron | 40.0% | |
CAAGCTAGAGCAAGTATGTT+AGG | - | chr8_2:63841432-63841451 | Msa1261470:intron | 40.0% | |
TTCTATCCCTATCCCTATCA+TGG | + | chr8_2:63841290-63841309 | None:intergenic | 40.0% | |
! | CAACTTTTATACCCCTGTCA+CGG | + | chr8_2:63841575-63841594 | None:intergenic | 40.0% |
! | GAAAGCATGTTAGATCGTGA+TGG | - | chr8_2:63841627-63841646 | Msa1261470:intron | 40.0% |
TTCTACTCCTATCTCTGTCA+CGG | + | chr8_2:63841662-63841681 | None:intergenic | 40.0% | |
AGAAGAGTTGAGCATTTGCA+AGG | - | chr8_2:63841678-63841697 | Msa1261470:intron | 40.0% | |
TATCCCTAACCATGATGTCA+CGG | + | chr8_2:63841755-63841774 | None:intergenic | 40.0% | |
ATTGGAATCATGACGGTGAT+AGG | - | chr8_2:63841835-63841854 | Msa1261470:intron | 40.0% | |
TTGGAATCATGACGGTGATA+GGG | - | chr8_2:63841836-63841855 | Msa1261470:intron | 40.0% | |
TGATAGGGCTGAAAATGAAC+TGG | - | chr8_2:63841851-63841870 | Msa1261470:intron | 40.0% | |
TAAGGACCGTAACTTAGATG+TGG | - | chr8_2:63841905-63841924 | Msa1261470:CDS | 40.0% | |
CTGGATCCACATCTAAGTTA+CGG | + | chr8_2:63841914-63841933 | None:intergenic | 40.0% | |
TGTGGATCCAGACAAAAAGA+TGG | - | chr8_2:63841923-63841942 | Msa1261470:CDS | 40.0% | |
TCTTACTCGATGTTTCTCCT+CGG | + | chr8_2:63841999-63842018 | None:intergenic | 40.0% | |
TAGTCCATCAGATTCCAATG+GGG | - | chr8_2:63842137-63842156 | Msa1261470:intron | 40.0% | |
AAATGTGCCAGAATCAGTCT+CGG | + | chr8_2:63842266-63842285 | None:intergenic | 40.0% | |
!! | TACTTGCTTTTGTGGTCTTC+AGG | - | chr8_2:63842298-63842317 | Msa1261470:intron | 40.0% |
! | TCTCCTCTTTTATGTGTTGG+TGG | - | chr8_2:63842618-63842637 | Msa1261470:intron | 40.0% |
!! | GGAGTTACAAAAGCACTCTA+AGG | - | chr8_2:63842712-63842731 | Msa1261470:intron | 40.0% |
GATATTGCTAACATTGGGCT+TGG | - | chr8_2:63842963-63842982 | Msa1261470:CDS | 40.0% | |
AGAAAACATTCATGCAGCTG+AGG | + | chr8_2:63842998-63843017 | None:intergenic | 40.0% | |
AACCAGTGAAAAAGAACTCC+AGG | - | chr8_2:63843048-63843067 | Msa1261470:CDS | 40.0% | |
!! | AACCTGGAGTTCTTTTTCAC+TGG | + | chr8_2:63843053-63843072 | None:intergenic | 40.0% |
TATATGGTGCAGTTGTATGC+AGG | - | chr8_2:63843311-63843330 | Msa1261470:CDS | 40.0% | |
! | GCACGGGTATTTGTATTTTG+AGG | - | chr8_2:63843471-63843490 | Msa1261470:CDS | 40.0% |
ACTTATGCGCGAAGTTGTAA+TGG | - | chr8_2:63843703-63843722 | Msa1261470:CDS | 40.0% | |
! | CAGCCATTTCCTTGATAACA+AGG | + | chr8_2:63843760-63843779 | None:intergenic | 40.0% |
GGTCTTGGACAACTTACAAA+TGG | - | chr8_2:63844043-63844062 | Msa1261470:intron | 40.0% | |
TATCTCACTAGCTCCATGTA+TGG | - | chr8_2:63844167-63844186 | Msa1261470:intron | 40.0% | |
TTAGCATATGGCATCTTACC+TGG | - | chr8_2:63844317-63844336 | Msa1261470:five_prime_UTR | 40.0% | |
TAGCATATGGCATCTTACCT+GGG | - | chr8_2:63844318-63844337 | Msa1261470:five_prime_UTR | 40.0% | |
! | TTTTCTCTACATATCAGCCC+AGG | + | chr8_2:63844338-63844357 | None:intergenic | 40.0% |
!!! | CATCGTCCAGTGTCATTTTG+TGG | + | chr8_2:63840505-63840524 | None:intergenic | 45.0% |
GATAGCTCCATTTACGTTGG+TGG | - | chr8_2:63840524-63840543 | Msa1261470:three_prime_UTR | 45.0% | |
AGCATTTCCCAAGTGTACGT+TGG | + | chr8_2:63840771-63840790 | None:intergenic | 45.0% | |
TCAGACTATTAATGGCCGTG+TGG | - | chr8_2:63840975-63840994 | Msa1261470:intron | 45.0% | |
GGCCGTGTGGTTAAAGTTAA+TGG | - | chr8_2:63840988-63841007 | Msa1261470:intron | 45.0% | |
!! | GGTGGTGGCAGATCAAATTT+TGG | - | chr8_2:63841042-63841061 | Msa1261470:intron | 45.0% |
ACAGGAATAGAGGCAGTGAT+TGG | - | chr8_2:63841184-63841203 | Msa1261470:intron | 45.0% | |
ATAGGTCTCGAGACCATGAT+AGG | - | chr8_2:63841274-63841293 | Msa1261470:intron | 45.0% | |
TAGGTCTCGAGACCATGATA+GGG | - | chr8_2:63841275-63841294 | Msa1261470:intron | 45.0% | |
TCGAGACCATGATAGGGATA+GGG | - | chr8_2:63841281-63841300 | Msa1261470:intron | 45.0% | |
TTCTATCCCTATCCCTGTCA+CGG | + | chr8_2:63841383-63841402 | None:intergenic | 45.0% | |
ATAGATCCCGAGACCATGAT+AGG | - | chr8_2:63841460-63841479 | Msa1261470:intron | 45.0% | |
TAGATCCCGAGACCATGATA+GGG | - | chr8_2:63841461-63841480 | Msa1261470:intron | 45.0% | |
AAAGCATGTTAGACCGCGAT+GGG | - | chr8_2:63841721-63841740 | Msa1261470:intron | 45.0% | |
TAACCATGATGTCACGGTCT+CGG | + | chr8_2:63841749-63841768 | None:intergenic | 45.0% | |
AGACCGTGACATCATGGTTA+GGG | - | chr8_2:63841749-63841768 | Msa1261470:CDS | 45.0% | |
GCACCACCAACACATAAAAG+AGG | + | chr8_2:63842624-63842643 | None:intergenic | 45.0% | |
TCAGGTTTCTAAGCTGGAAG+AGG | - | chr8_2:63842661-63842680 | Msa1261470:CDS | 45.0% | |
CAGGTTTCTAAGCTGGAAGA+GGG | - | chr8_2:63842662-63842681 | Msa1261470:CDS | 45.0% | |
TTCTAAGCTGGAAGAGGGAT+TGG | - | chr8_2:63842667-63842686 | Msa1261470:intron | 45.0% | |
ATATTTACCGCAGAAACGGG+AGG | - | chr8_2:63842838-63842857 | Msa1261470:CDS | 45.0% | |
TTACCTTGGTCAACTGCATC+TGG | + | chr8_2:63842901-63842920 | None:intergenic | 45.0% | |
!! | TAAAAAAAAATACAATAATA+TGG | + | chr8_2:63840871-63840890 | None:intergenic | 5.0% |
!! | AAAGTAAAATTAATAATAAA+TGG | + | chr8_2:63843245-63843264 | None:intergenic | 5.0% |
GGGAAGACCACCAACGTAAA+TGG | + | chr8_2:63840534-63840553 | None:intergenic | 50.0% | |
! | GTTTCATCAGTGGCGTCGAA+GGG | + | chr8_2:63840554-63840573 | None:intergenic | 50.0% |
! | TGTTTCATCAGTGGCGTCGA+AGG | + | chr8_2:63840555-63840574 | None:intergenic | 50.0% |
TGGCGCCATTCTTGATGTCA+AGG | - | chr8_2:63840598-63840617 | Msa1261470:three_prime_UTR | 50.0% | |
AGGAATGGAGATTGGGATCG+TGG | - | chr8_2:63841102-63841121 | Msa1261470:intron | 50.0% | |
AATGGAGATTGGGATCGTGG+CGG | - | chr8_2:63841105-63841124 | Msa1261470:intron | 50.0% | |
ATTGGACCAGAGGTGGTGAT+TGG | - | chr8_2:63841202-63841221 | Msa1261470:intron | 50.0% | |
ATTGGACTCGACAGCATCAG+AGG | - | chr8_2:63841220-63841239 | Msa1261470:intron | 50.0% | |
CATGGTCTCGAGACCTATCA+CGG | + | chr8_2:63841272-63841291 | None:intergenic | 50.0% | |
CTCGAGACCATGATAGGGAT+AGG | - | chr8_2:63841280-63841299 | Msa1261470:intron | 50.0% | |
CCTATCCCTATCATGGTCTC+GGG | + | chr8_2:63841283-63841302 | None:intergenic | 50.0% | |
CCCTATCCCTATCATGGTCT+CGG | + | chr8_2:63841284-63841303 | None:intergenic | 50.0% | |
CCGAGACCATGATAGGGATA+GGG | - | chr8_2:63841467-63841486 | Msa1261470:intron | 50.0% | |
AAAGCGCGTTAGACCGTGAT+AGG | - | chr8_2:63841535-63841554 | Msa1261470:intron | 50.0% | |
TTATACCCCTGTCACGGTCA+CGG | + | chr8_2:63841569-63841588 | None:intergenic | 50.0% | |
TCCTATCTCTGTCACGGTCT+CGG | + | chr8_2:63841656-63841675 | None:intergenic | 50.0% | |
! | GAAAGCATGTTAGACCGCGA+TGG | - | chr8_2:63841720-63841739 | Msa1261470:intron | 50.0% |
AACCATGATGTCACGGTCTC+GGG | + | chr8_2:63841748-63841767 | None:intergenic | 50.0% | |
GAGACCGTGACATCATGGTT+AGG | - | chr8_2:63841748-63841767 | Msa1261470:CDS | 50.0% | |
ACTGGAAAACAGCAGGGTAC+AGG | - | chr8_2:63841869-63841888 | Msa1261470:intron | 50.0% | |
CTGGAAAACAGCAGGGTACA+GGG | - | chr8_2:63841870-63841889 | Msa1261470:intron | 50.0% | |
ACAGGGTGGAGATGTGGATA+AGG | - | chr8_2:63841887-63841906 | Msa1261470:CDS | 50.0% | |
TGGTCCCCATTGGAATCTGA+TGG | + | chr8_2:63842144-63842163 | None:intergenic | 50.0% | |
CTCATCATTGTGGTCCCCAT+TGG | + | chr8_2:63842154-63842173 | None:intergenic | 50.0% | |
CAATGGGGACCACAATGATG+AGG | - | chr8_2:63842152-63842171 | Msa1261470:intron | 50.0% | |
! | ATGGCGATGTCTGCTCTAGA+AGG | - | chr8_2:63842425-63842444 | Msa1261470:CDS | 50.0% |
!! | GTGTTGGTGGTGCTGAAAAG+TGG | - | chr8_2:63842631-63842650 | Msa1261470:CDS | 50.0% |
TTGTTCGAGAGTGACGGTGA+TGG | - | chr8_2:63844013-63844032 | Msa1261470:CDS | 50.0% | |
GTTAATGGGGTGAGGTCTCG+TGG | - | chr8_2:63841003-63841022 | Msa1261470:intron | 55.0% | |
AGAGGCAGTGATTGGACCAG+AGG | - | chr8_2:63841192-63841211 | Msa1261470:intron | 55.0% | |
TCGAGTCCAATCACCACCTC+TGG | + | chr8_2:63841211-63841230 | None:intergenic | 55.0% | |
AGAGGTCTCGAGACCGTGAT+AGG | - | chr8_2:63841238-63841257 | Msa1261470:intron | 55.0% | |
CCCGAGACCATGATAGGGAT+AGG | - | chr8_2:63841466-63841485 | Msa1261470:intron | 55.0% | |
CCTATCTCTGTCACGGTCTC+GGG | + | chr8_2:63841655-63841674 | None:intergenic | 55.0% | |
GAAAACAGCAGGGTACAGGG+TGG | - | chr8_2:63841873-63841892 | Msa1261470:intron | 55.0% | |
ACAGCATCCTCCCGTTTCTG+CGG | + | chr8_2:63842848-63842867 | None:intergenic | 55.0% | |
TCGCCAGATGCAGTTGACCA+AGG | - | chr8_2:63842895-63842914 | Msa1261470:CDS | 55.0% | |
! | GAGAGTGACGGTGATGGTGA+TGG | - | chr8_2:63844019-63844038 | Msa1261470:CDS | 55.0% |
!! | AGTGACGGTGATGGTGATGG+TGG | - | chr8_2:63844022-63844041 | Msa1261470:CDS | 55.0% |
!! | GGTGATGGTGATGGTGGTCT+TGG | - | chr8_2:63844028-63844047 | Msa1261470:intron | 55.0% |
AATGGGGTGAGGTCTCGTGG+CGG | - | chr8_2:63841006-63841025 | Msa1261470:intron | 60.0% | |
GGCAGTGATTGGACCAGAGG+TGG | - | chr8_2:63841195-63841214 | Msa1261470:intron | 60.0% | |
ATAGGTCCCGCGACCGTGAT+AGG | - | chr8_2:63841256-63841275 | Msa1261470:intron | 60.0% | |
TCGAGACCTATCACGGTCGC+GGG | + | chr8_2:63841265-63841284 | None:intergenic | 60.0% | |
CTCGAGACCTATCACGGTCG+CGG | + | chr8_2:63841266-63841285 | None:intergenic | 60.0% | |
CACGGTCTCGGGACCTATCA+CGG | + | chr8_2:63841365-63841384 | None:intergenic | 60.0% | |
ATAGGTCCCGAGACCGTGAC+AGG | - | chr8_2:63841367-63841386 | Msa1261470:intron | 60.0% | |
TAGGTCCCGAGACCGTGACA+GGG | - | chr8_2:63841368-63841387 | Msa1261470:intron | 60.0% | |
CCTATCCCTGTCACGGTCTC+GGG | + | chr8_2:63841376-63841395 | None:intergenic | 60.0% | |
CCCTATCCCTGTCACGGTCT+CGG | + | chr8_2:63841377-63841396 | None:intergenic | 60.0% | |
CCGAGACCGTGACAGGGATA+GGG | - | chr8_2:63841374-63841393 | Msa1261470:intron | 60.0% | |
CACGGTCTCGGGACCTATCA+CGG | + | chr8_2:63841365-63841384 | None:intergenic | 60.0% | |
CCCGAGACCGTGACAGAGAT+AGG | - | chr8_2:63841652-63841671 | Msa1261470:intron | 60.0% | |
GTCCCGAGACCGTGACATCA+TGG | - | chr8_2:63841743-63841762 | Msa1261470:CDS | 60.0% | |
CAGGGTACAGGGTGGAGATG+TGG | - | chr8_2:63841881-63841900 | Msa1261470:intron | 60.0% | |
CACGGTCGCGGGACCTATCA+CGG | + | chr8_2:63841254-63841273 | None:intergenic | 65.0% | |
CCCGAGACCGTGACAGGGAT+AGG | - | chr8_2:63841373-63841392 | Msa1261470:intron | 65.0% | |
CCTGTCACGGTCACGGTCTC+GGG | + | chr8_2:63841562-63841581 | None:intergenic | 65.0% | |
CCCTGTCACGGTCACGGTCT+CGG | + | chr8_2:63841563-63841582 | None:intergenic | 65.0% | |
CCGAGACCGTGACCGTGACA+GGG | - | chr8_2:63841560-63841579 | Msa1261470:intron | 65.0% | |
CGAGACCGTGACCGTGACAG+GGG | - | chr8_2:63841561-63841580 | Msa1261470:intron | 65.0% | |
GTGAGGTCTCGTGGCGGTGG+AGG | - | chr8_2:63841012-63841031 | Msa1261470:intron | 70.0% | |
AGGTCTCGTGGCGGTGGAGG+TGG | - | chr8_2:63841015-63841034 | Msa1261470:intron | 70.0% | |
TCTCGTGGCGGTGGAGGTGG+CGG | - | chr8_2:63841018-63841037 | Msa1261470:intron | 70.0% | |
CCCGAGACCGTGACCGTGAC+AGG | - | chr8_2:63841559-63841578 | Msa1261470:intron | 70.0% | |
CACGGTCTCGGGACCCATCG+CGG | + | chr8_2:63841737-63841756 | None:intergenic | 70.0% | |
GGGGTGAGGTCTCGTGGCGG+TGG | - | chr8_2:63841009-63841028 | Msa1261470:intron | 75.0% | |
! | GGTGGAGGTGGCGGTGGTGG+TGG | - | chr8_2:63841027-63841046 | Msa1261470:intron | 75.0% |
!! | CGTGGCGGTGGAGGTGGCGG+TGG | - | chr8_2:63841021-63841040 | Msa1261470:intron | 80.0% |
!! | GGCGGTGGAGGTGGCGGTGG+TGG | - | chr8_2:63841024-63841043 | Msa1261470:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 63840403 | 63844395 | 63840403 | ID=Msa1261470;Name=Msa1261470 |
chr8_2 | mRNA | 63840403 | 63844395 | 63840403 | ID=Msa1261470-mRNA-1;Parent=Msa1261470;Name=Msa1261470-mRNA-1;_AED=0.10;_eAED=0.10;_QI=106|1|0.88|1|1|1|9|311|549 |
chr8_2 | exon | 63840403 | 63840803 | 63840403 | ID=Msa1261470-mRNA-1:exon:20656;Parent=Msa1261470-mRNA-1 |
chr8_2 | exon | 63841729 | 63841797 | 63841729 | ID=Msa1261470-mRNA-1:exon:20655;Parent=Msa1261470-mRNA-1 |
chr8_2 | exon | 63841882 | 63841947 | 63841882 | ID=Msa1261470-mRNA-1:exon:20654;Parent=Msa1261470-mRNA-1 |
chr8_2 | exon | 63842065 | 63842133 | 63842065 | ID=Msa1261470-mRNA-1:exon:20653;Parent=Msa1261470-mRNA-1 |
chr8_2 | exon | 63842425 | 63842478 | 63842425 | ID=Msa1261470-mRNA-1:exon:20652;Parent=Msa1261470-mRNA-1 |
chr8_2 | exon | 63842625 | 63842682 | 63842625 | ID=Msa1261470-mRNA-1:exon:20651;Parent=Msa1261470-mRNA-1 |
chr8_2 | exon | 63842786 | 63843819 | 63842786 | ID=Msa1261470-mRNA-1:exon:20650;Parent=Msa1261470-mRNA-1 |
chr8_2 | exon | 63843943 | 63844041 | 63843943 | ID=Msa1261470-mRNA-1:exon:20649;Parent=Msa1261470-mRNA-1 |
chr8_2 | exon | 63844179 | 63844395 | 63844179 | ID=Msa1261470-mRNA-1:exon:20648;Parent=Msa1261470-mRNA-1 |
chr8_2 | five_prime_UTR | 63844290 | 63844395 | 63844290 | ID=Msa1261470-mRNA-1:five_prime_utr;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63844179 | 63844289 | 63844179 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63843943 | 63844041 | 63843943 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63842786 | 63843819 | 63842786 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63842625 | 63842682 | 63842625 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63842425 | 63842478 | 63842425 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63842065 | 63842133 | 63842065 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63841882 | 63841947 | 63841882 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63841729 | 63841797 | 63841729 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | CDS | 63840714 | 63840803 | 63840714 | ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1 |
chr8_2 | three_prime_UTR | 63840403 | 63840713 | 63840403 | ID=Msa1261470-mRNA-1:three_prime_utr;Parent=Msa1261470-mRNA-1 |
Gene Sequence |
Protein sequence |