AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1261470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261470 MtrunA17_Chr4g0062931 93.772 562 15 4 1 549 1 555 0.0 854
Msa1261470 MtrunA17_Chr5g0429721 32.911 79 52 1 5 82 34 112 1.43e-12 69.7
Msa1261470 MtrunA17_Chr1g0210241 35.955 89 56 1 1 88 1 89 7.29e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261470 AT5G19960.1 42.487 193 66 5 1 184 1 157 8.00e-33 129
Msa1261470 AT5G19960.1 41.379 116 66 1 425 540 221 334 1.14e-15 79.0
Msa1261470 AT5G19960.2 41.379 116 66 1 425 540 133 246 6.37e-16 78.2
Msa1261470 AT4G39260.3 42.857 84 47 1 9 91 8 91 6.13e-15 70.9
Msa1261470 AT3G47120.2 39.474 76 45 1 5 79 34 109 3.30e-13 70.9
Msa1261470 AT3G47120.1 39.474 76 45 1 5 79 34 109 5.52e-13 70.9

Find 152 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCGTGTGGTTAAAGTTAA+TGG 0.201362 8_2:-63843788 Msa1261470:CDS
GTTATGAATCAGACTATTAA+TGG 0.247320 8_2:-63843809 Msa1261470:intron
GGTGGTGGCAGATCAAATTT+TGG 0.252328 8_2:-63843734 Msa1261470:CDS
CGCACTGTCTTCAATTTGTA+TGG 0.310277 8_2:-63844198 Msa1261470:CDS
GGGAAGACCACCAACGTAAA+TGG 0.322442 8_2:+63844245 None:intergenic
GGTGGAGGTGGCGGTGGTGG+TGG 0.340367 8_2:-63843749 Msa1261470:CDS
GGCGGTGGAGGTGGCGGTGG+TGG 0.354294 8_2:-63843752 Msa1261470:CDS
CCCTATCCCTGTCACGGTCT+CGG 0.354327 8_2:+63843402 None:intergenic
CATTACCATGATCATAATCT+TGG 0.358631 8_2:+63843627 None:intergenic
TGAAGTAGTAAATATCAATT+TGG 0.359952 8_2:-63844386 None:intergenic
CCCTATCCCTATCATGGTCT+CGG 0.372822 8_2:+63843309 None:intergenic
GTGAGGTCTCGTGGCGGTGG+AGG 0.372910 8_2:-63843764 Msa1261470:CDS
ATTGGAATCATGACGGTGAT+AGG 0.374936 8_2:-63842941 Msa1261470:CDS
CTTAAAATAAATTTAGCATA+TGG 0.379102 8_2:-63840471 Msa1261470:three_prime_UTR
TCCTATCTCTGTCACGGTCT+CGG 0.379142 8_2:+63843123 None:intergenic
TGTATGGTAAGATTCATCTT+TGG 0.384035 8_2:-63840593 Msa1261470:three_prime_UTR
ATAGGTCTCGAGACCATGAT+AGG 0.390177 8_2:-63843502 Msa1261470:CDS
CCCTGTCACGGTCACGGTCT+CGG 0.400331 8_2:+63843216 None:intergenic
CTTACAAATGGAAGTCTAGA+TGG 0.403989 8_2:-63840721 Msa1261470:CDS
AGGTCTCGTGGCGGTGGAGG+TGG 0.410261 8_2:-63843761 Msa1261470:CDS
ATGATGAAAGGAATGGAGAT+TGG 0.413487 8_2:-63843682 Msa1261470:CDS
CCTGTCACGGTCACGGTCTC+GGG 0.417238 8_2:+63843217 None:intergenic
ATAGATCCCGAGACCATGAT+AGG 0.418281 8_2:-63843316 Msa1261470:CDS
GCCGTGTGGTTAAAGTTAAT+GGG 0.420536 8_2:-63843787 Msa1261470:CDS
AAAGCGCGTTAGACCGTGAT+AGG 0.422370 8_2:-63843241 Msa1261470:CDS
AAGATTATAGCACTGCTTGT+TGG 0.425567 8_2:+63840520 None:intergenic
CGTGGCGGTGGAGGTGGCGG+TGG 0.426158 8_2:-63843755 Msa1261470:CDS
AGAAAGAAGACTTAATGTTA+TGG 0.428868 8_2:-63842085 Msa1261470:CDS
AAAGCATGTTAGATGATGAT+TGG 0.430802 8_2:-63842959 Msa1261470:CDS
TTAGCATATGGCATCTTACC+TGG 0.431591 8_2:-63840459 Msa1261470:three_prime_UTR
CCCGAGACCGTGACCGTGAC+AGG 0.432306 8_2:-63843217 Msa1261470:CDS
TTCTAAGCTGGAAGAGGGAT+TGG 0.434291 8_2:-63842109 Msa1261470:CDS
TTCTATCCCTATCCCTATCA+TGG 0.434809 8_2:+63843489 None:intergenic
TTACCTTGGTCAACTGCATC+TGG 0.438734 8_2:+63841878 None:intergenic
TCTCGTGGCGGTGGAGGTGG+CGG 0.438886 8_2:-63843758 Msa1261470:CDS
CCTATCCCTGTCACGGTCTC+GGG 0.441091 8_2:+63843403 None:intergenic
CAAGCTAGAGCAAGTATGTT+AGG 0.441748 8_2:-63843344 Msa1261470:CDS
GGTGATGGTGATGGTGGTCT+TGG 0.448887 8_2:-63840748 Msa1261470:CDS
ATCAATGACCAACGTACACT+TGG 0.451190 8_2:-63844016 Msa1261470:CDS
CCTATCTCTGTCACGGTCTC+GGG 0.453975 8_2:+63843124 None:intergenic
AAAGCATGTTAGTCCGTGAT+AGG 0.455542 8_2:-63843427 Msa1261470:CDS
AACCATGATGTCACGGTCTC+GGG 0.456700 8_2:+63843031 None:intergenic
GGGGTGAGGTCTCGTGGCGG+TGG 0.457192 8_2:-63843767 Msa1261470:CDS
GGAGTTACAAAAGCACTCTA+AGG 0.459318 8_2:-63842064 Msa1261470:intron
GAGACCGTGACATCATGGTT+AGG 0.463473 8_2:-63843028 Msa1261470:CDS
TGATAGGGCTGAAAATGAAC+TGG 0.463823 8_2:-63842925 Msa1261470:CDS
TGATGAAAGGAATGGAGATT+GGG 0.465545 8_2:-63843681 Msa1261470:CDS
CTCATCATTGTGGTCCCCAT+TGG 0.467282 8_2:+63842625 None:intergenic
CCCGAGACCGTGACAGAGAT+AGG 0.470681 8_2:-63843124 Msa1261470:CDS
CGAGACCAAGATTATGATCA+TGG 0.478575 8_2:-63843632 Msa1261470:CDS
AGAGGTCTCGAGACCGTGAT+AGG 0.480387 8_2:-63843538 Msa1261470:CDS
GTAATGAGAAAGATGGATAC+AGG 0.480470 8_2:-63843610 Msa1261470:CDS
AAAGATGGATACAGGAATAG+AGG 0.481913 8_2:-63843602 Msa1261470:CDS
ACAGGAATAGAGGCAGTGAT+TGG 0.482052 8_2:-63843592 Msa1261470:CDS
ATAGTCCATCAGATTCCAAT+GGG 0.482340 8_2:-63842640 Msa1261470:CDS
TTCTATCCCTATCCCTATCA+TGG 0.483071 8_2:+63843303 None:intergenic
CCCGAGACCGTGACAGGGAT+AGG 0.483596 8_2:-63843403 Msa1261470:CDS
TGTTTCATCAGTGGCGTCGA+AGG 0.487655 8_2:+63844224 None:intergenic
ACTGGAAAACAGCAGGGTAC+AGG 0.494266 8_2:-63842907 Msa1261470:CDS
ATAGGTCCCGAGACCGTGAC+AGG 0.495188 8_2:-63843409 Msa1261470:CDS
TCGAGTCCAATCACCACCTC+TGG 0.499545 8_2:+63843568 None:intergenic
ATTGGACCAGAGGTGGTGAT+TGG 0.502244 8_2:-63843574 Msa1261470:CDS
TAACCATGATGTCACGGTCT+CGG 0.507957 8_2:+63843030 None:intergenic
GGTCTTGGACAACTTACAAA+TGG 0.508402 8_2:-63840733 Msa1261470:CDS
ACAGGGTGGAGATGTGGATA+AGG 0.508614 8_2:-63842889 Msa1261470:CDS
CCTATCCCTATCATGGTCTC+GGG 0.509297 8_2:+63843310 None:intergenic
AGACCGTGACATCATGGTTA+GGG 0.509461 8_2:-63843027 Msa1261470:CDS
CATCATAATGATGAAAGGAA+TGG 0.517662 8_2:-63843689 Msa1261470:CDS
CCCGAGACCATGATAGGGAT+AGG 0.517941 8_2:-63843310 Msa1261470:CDS
CACGGTCTCGGGACCTATCA+CGG 0.518091 8_2:+63843228 None:intergenic
AAAATGAACTGGAAAACAGC+AGG 0.521165 8_2:-63842914 Msa1261470:CDS
CTCGAGACCATGATAGGGAT+AGG 0.523344 8_2:-63843496 Msa1261470:CDS
TTGTAACTTTCACAAACCCT+AGG 0.525397 8_2:-63843979 Msa1261470:CDS
TAGCATCAATTGCAGACCTA+GGG 0.528965 8_2:+63843963 None:intergenic
CACGGTCTCGGGACCTATCA+CGG 0.531377 8_2:+63843414 None:intergenic
GATAGCTCCATTTACGTTGG+TGG 0.531498 8_2:-63844252 Msa1261470:CDS
GATCATGGTAATGAGAAAGA+TGG 0.531558 8_2:-63843617 Msa1261470:CDS
TATCTCACTAGCTCCATGTA+TGG 0.533587 8_2:-63840609 Msa1261470:three_prime_UTR
CTGGATCCACATCTAAGTTA+CGG 0.535060 8_2:+63842865 None:intergenic
TCAGGTTTCTAAGCTGGAAG+AGG 0.536137 8_2:-63842115 Msa1261470:intron
CCGAGACCGTGACAGGGATA+GGG 0.537071 8_2:-63843402 Msa1261470:CDS
AGAGTGAAGGAGAAAGACTA+TGG 0.541578 8_2:-63844354 Msa1261470:five_prime_UTR
CTCGAGACCTATCACGGTCG+CGG 0.542402 8_2:+63843513 None:intergenic
CTGGAAAACAGCAGGGTACA+GGG 0.545302 8_2:-63842906 Msa1261470:CDS
CAGGTTTCTAAGCTGGAAGA+GGG 0.546464 8_2:-63842114 Msa1261470:CDS
AGAAGAGTTGAGCATTTGCA+AGG 0.546715 8_2:-63843098 Msa1261470:CDS
AAGATGAATCTTACCATACA+TGG 0.547436 8_2:+63840596 None:intergenic
GTCCCGAGACCGTGACATCA+TGG 0.550463 8_2:-63843033 Msa1261470:CDS
ATAGCATCAATTGCAGACCT+AGG 0.550720 8_2:+63843962 None:intergenic
GACTACCTTGACATCAAGAA+TGG 0.552219 8_2:+63844173 None:intergenic
TTATACCCCTGTCACGGTCA+CGG 0.557856 8_2:+63843210 None:intergenic
CCGAGACCATGATAGGGATA+GGG 0.559495 8_2:-63843309 Msa1261470:CDS
CCCCATTAACTTTAACCACA+CGG 0.561289 8_2:+63843786 None:intergenic
GAGCATATGCAAAATTATGA+TGG 0.562214 8_2:-63843461 Msa1261470:CDS
CAGGGTACAGGGTGGAGATG+TGG 0.563252 8_2:-63842895 Msa1261470:CDS
GAAAGCATGTTAGATCGTGA+TGG 0.563810 8_2:-63843149 Msa1261470:CDS
AAAGCATGTTAGACCGCGAT+GGG 0.565934 8_2:-63843055 Msa1261470:CDS
TTCTATCCCTATCCCTGTCA+CGG 0.566463 8_2:+63843396 None:intergenic
GAACACATGCTAGATTATGA+TGG 0.568841 8_2:-63843368 Msa1261470:CDS
GAAATTCATACTATATTGTG+CGG 0.571168 8_2:-63840562 Msa1261470:three_prime_UTR
TGGTCCCCATTGGAATCTGA+TGG 0.575643 8_2:+63842635 None:intergenic
GTTTCATCAGTGGCGTCGAA+GGG 0.576277 8_2:+63844225 None:intergenic
TGGTTAAAGTTAATGGGGTG+AGG 0.576628 8_2:-63843781 Msa1261470:CDS
TCTTACTCGATGTTTCTCCT+CGG 0.578233 8_2:+63842780 None:intergenic
ATTATCATCATAATGATGAA+AGG 0.578991 8_2:-63843694 Msa1261470:CDS
AATAGTCCATCAGATTCCAA+TGG 0.582473 8_2:-63842641 Msa1261470:CDS
AGGAATGGAGATTGGGATCG+TGG 0.582856 8_2:-63843674 Msa1261470:CDS
TCGAGACCATGATAGGGATA+GGG 0.583018 8_2:-63843495 Msa1261470:CDS
GAAAGCATGTTAGACCGCGA+TGG 0.583363 8_2:-63843056 Msa1261470:CDS
TTCTACTCCTATCTCTGTCA+CGG 0.583559 8_2:+63843117 None:intergenic
TAGCATATGGCATCTTACCT+GGG 0.588864 8_2:-63840458 Msa1261470:three_prime_UTR
TGGCGCCATTCTTGATGTCA+AGG 0.589109 8_2:-63844178 Msa1261470:intron
CATGGTCTCGAGACCTATCA+CGG 0.589442 8_2:+63843507 None:intergenic
GTTAATGGGGTGAGGTCTCG+TGG 0.592393 8_2:-63843773 Msa1261470:CDS
TTGGAATCATGACGGTGATA+GGG 0.593640 8_2:-63842940 Msa1261470:CDS
GGCAGTGATTGGACCAGAGG+TGG 0.596616 8_2:-63843581 Msa1261470:CDS
CCGAGACCGTGACCGTGACA+GGG 0.596911 8_2:-63843216 Msa1261470:CDS
AAAGCATGTTAGATCGTGAT+GGG 0.597103 8_2:-63843148 Msa1261470:CDS
ATTGGACTCGACAGCATCAG+AGG 0.597239 8_2:-63843556 Msa1261470:CDS
GAGAGTGACGGTGATGGTGA+TGG 0.598421 8_2:-63840757 Msa1261470:CDS
TTGTCTCTTTAATTGCCTAG+TGG 0.600658 8_2:-63840639 Msa1261470:three_prime_UTR
TCAATGACCAACGTACACTT+GGG 0.603480 8_2:-63844015 Msa1261470:CDS
TCAATATTGTTCGAGAGTGA+CGG 0.605658 8_2:-63840769 Msa1261470:CDS
TAGATCCCGAGACCATGATA+GGG 0.613104 8_2:-63843315 Msa1261470:CDS
AGTGCGAATTGTTTCATCAG+TGG 0.616718 8_2:+63844215 None:intergenic
TAAGGACCGTAACTTAGATG+TGG 0.622168 8_2:-63842871 Msa1261470:CDS
TCAGTTCCACAAAATGACAC+TGG 0.624699 8_2:-63844280 Msa1261470:exon
AGAGGCAGTGATTGGACCAG+AGG 0.630012 8_2:-63843584 Msa1261470:CDS
AGCATTTCCCAAGTGTACGT+TGG 0.632194 8_2:+63844008 None:intergenic
GATGCTATCAACGATATGAA+CGG 0.633466 8_2:-63843947 Msa1261470:CDS
TATCCCTAACCATGATGTCA+CGG 0.634194 8_2:+63843024 None:intergenic
ATCACATTACCTCATCATTG+TGG 0.638871 8_2:+63842615 None:intergenic
TAGGTCTCGAGACCATGATA+GGG 0.644021 8_2:-63843501 Msa1261470:CDS
CACGGTCTCGGGACCCATCG+CGG 0.649874 8_2:+63843042 None:intergenic
AGTGACGGTGATGGTGATGG+TGG 0.650592 8_2:-63840754 Msa1261470:CDS
GATGATAGCTCCATTTACGT+TGG 0.659955 8_2:-63844255 Msa1261470:CDS
AGGTAGAAGATGAATTAGAG+AGG 0.662402 8_2:-63842458 Msa1261470:CDS
CGAGACCGTGACCGTGACAG+GGG 0.664208 8_2:-63843215 Msa1261470:CDS
CAATGGGGACCACAATGATG+AGG 0.667084 8_2:-63842624 Msa1261470:intron
TCGCCAGATGCAGTTGACCA+AGG 0.667948 8_2:-63841881 Msa1261470:intron
TTGTTCGAGAGTGACGGTGA+TGG 0.673128 8_2:-63840763 Msa1261470:CDS
AAATGAACTGGAAAACAGCA+GGG 0.689851 8_2:-63842913 Msa1261470:CDS
ATATTTACCGCAGAAACGGG+AGG 0.695680 8_2:-63841938 Msa1261470:intron
AATGGGGTGAGGTCTCGTGG+CGG 0.699964 8_2:-63843770 Msa1261470:CDS
GATGATGATTGGAATCATGA+CGG 0.709264 8_2:-63842948 Msa1261470:CDS
TAGGTCCCGAGACCGTGACA+GGG 0.714552 8_2:-63843408 Msa1261470:CDS
CCGTGTGGTTAAAGTTAATG+GGG 0.715692 8_2:-63843786 Msa1261470:CDS
TCAGACTATTAATGGCCGTG+TGG 0.721965 8_2:-63843801 Msa1261470:intron
AATGGAGATTGGGATCGTGG+CGG 0.727702 8_2:-63843671 Msa1261470:CDS
GCAATTAAAGAGACAACACA+TGG 0.728798 8_2:+63840646 None:intergenic
GAAAACAGCAGGGTACAGGG+TGG 0.744053 8_2:-63842903 Msa1261470:CDS
TAGTCCATCAGATTCCAATG+GGG 0.775487 8_2:-63842639 Msa1261470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTAAATAATTAACAA+GGG + chr8_2:63840665-63840684 None:intergenic 10.0%
!! AAGAAATTAAATAATTAACA+AGG + chr8_2:63840666-63840685 None:intergenic 10.0%
!! TAATAATCAATTCAAGTAAT+TGG - chr8_2:63840690-63840709 Msa1261470:three_prime_UTR 15.0%
!! AATAATCAATTCAAGTAATT+GGG - chr8_2:63840691-63840710 Msa1261470:three_prime_UTR 15.0%
!! AAACTAAAATGAATGAATAA+TGG - chr8_2:63842390-63842409 Msa1261470:intron 15.0%
!! TTATCAAACATTCAAATATT+GGG + chr8_2:63842525-63842544 None:intergenic 15.0%
!! TTTATCAAACATTCAAATAT+TGG + chr8_2:63842526-63842545 None:intergenic 15.0%
!!! AAATATAACTTTTTGGAAAA+GGG + chr8_2:63843383-63843402 None:intergenic 15.0%
!!! AAAATATAACTTTTTGGAAA+AGG + chr8_2:63843384-63843403 None:intergenic 15.0%
!! CTTAAAATAAATTTAGCATA+TGG - chr8_2:63844305-63844324 Msa1261470:five_prime_UTR 15.0%
!! AGTTTATTTGTGTTAATGTT+TGG - chr8_2:63840890-63840909 Msa1261470:intron 20.0%
!! ATTATCATCATAATGATGAA+AGG - chr8_2:63841082-63841101 Msa1261470:intron 20.0%
!!! ATAATGGAAATTTGTCAATA+TGG - chr8_2:63842406-63842425 Msa1261470:intron 20.0%
!! TAAATGATATTGCTAACATT+GGG - chr8_2:63842958-63842977 Msa1261470:CDS 20.0%
!! TAAACATTATAAAAAGTCAC+AGG + chr8_2:63843126-63843145 None:intergenic 20.0%
!!! AATATAACTTTTTGGAAAAG+GGG + chr8_2:63843382-63843401 None:intergenic 20.0%
!!! TTGATTTTCTAATCATTCAT+AGG + chr8_2:63843572-63843591 None:intergenic 20.0%
!! AAACATTGCTTAAAATAATG+TGG + chr8_2:63843597-63843616 None:intergenic 20.0%
!!! AAGAAATTTTTAATCAATCC+AGG + chr8_2:63844365-63844384 None:intergenic 20.0%
! GTTATGAATCAGACTATTAA+TGG - chr8_2:63840967-63840986 Msa1261470:intron 25.0%
!! ATCATAATTTTGCATATGCT+CGG + chr8_2:63841316-63841335 None:intergenic 25.0%
! ATGTCACAGAAAATTAACAT+TGG + chr8_2:63842025-63842044 None:intergenic 25.0%
! AGAAAGAAGACTTAATGTTA+TGG - chr8_2:63842691-63842710 Msa1261470:intron 25.0%
! TTAAAACTTAGACATTACCT+TGG + chr8_2:63842915-63842934 None:intergenic 25.0%
! GTAAATGATATTGCTAACAT+TGG - chr8_2:63842957-63842976 Msa1261470:CDS 25.0%
! ATATATATAAGACACAAACC+TGG + chr8_2:63843069-63843088 None:intergenic 25.0%
! AATGTTTAAATCTCACAATG+TGG - chr8_2:63843138-63843157 Msa1261470:CDS 25.0%
! TATATCGTCAACATAATTCA+AGG + chr8_2:63843284-63843303 None:intergenic 25.0%
! GACGATATAGAATCATTATA+TGG - chr8_2:63843295-63843314 Msa1261470:CDS 25.0%
!! CCATGGAAAATATAACTTTT+TGG + chr8_2:63843390-63843409 None:intergenic 25.0%
!! CCAAAAAGTTATATTTTCCA+TGG - chr8_2:63843387-63843406 Msa1261470:CDS 25.0%
! TAATTTCAGAGATATTTCCA+TGG + chr8_2:63843407-63843426 None:intergenic 25.0%
! CATTAATTAAGCTCCATAAA+GGG - chr8_2:63843618-63843637 Msa1261470:CDS 25.0%
! ATTAATTAAGCTCCATAAAG+GGG - chr8_2:63843619-63843638 Msa1261470:CDS 25.0%
!!! TTTTATTTTAGACCCCTTTA+TGG + chr8_2:63843634-63843653 None:intergenic 25.0%
! AAGAAAAACAAGAAATAAGC+TGG + chr8_2:63843909-63843928 None:intergenic 25.0%
!! TATGCTGAGTTAATTTTTGT+TGG - chr8_2:63843965-63843984 Msa1261470:CDS 25.0%
!! TTTCATACTTTTGGTATTTC+TGG + chr8_2:63844099-63844118 None:intergenic 25.0%
!! CAAAAATGGTTTCATACTTT+TGG + chr8_2:63844108-63844127 None:intergenic 25.0%
! GAAATTCATACTATATTGTG+CGG - chr8_2:63844214-63844233 Msa1261470:CDS 25.0%
AAACTCTCAAATCATAACCA+CGG + chr8_2:63840930-63840949 None:intergenic 30.0%
! GGTTATGATTTGAGAGTTTT+TGG - chr8_2:63840931-63840950 Msa1261470:intron 30.0%
CATCATAATGATGAAAGGAA+TGG - chr8_2:63841087-63841106 Msa1261470:intron 30.0%
CATTACCATGATCATAATCT+TGG + chr8_2:63841152-63841171 None:intergenic 30.0%
GAGCATATGCAAAATTATGA+TGG - chr8_2:63841315-63841334 Msa1261470:intron 30.0%
AAAGCATGTTAGATGATGAT+TGG - chr8_2:63841817-63841836 Msa1261470:intron 30.0%
! TGTTCGTCAAAACTTTTATC+AGG + chr8_2:63841963-63841982 None:intergenic 30.0%
AACATAAAAAAGAACAACCG+AGG - chr8_2:63841979-63841998 Msa1261470:intron 30.0%
GTTAATTTCCAACTGTTCTT+TGG - chr8_2:63842047-63842066 Msa1261470:intron 30.0%
TAAGTAAACCAAAGAACAGT+TGG + chr8_2:63842058-63842077 None:intergenic 30.0%
!!! CTTGTTTTTACTTGCTTTTG+TGG - chr8_2:63842290-63842309 Msa1261470:intron 30.0%
ACTGCTTGATCAACTAAAAA+AGG - chr8_2:63842349-63842368 Msa1261470:intron 30.0%
GAATGTTTGATAAATGCGTT+AGG - chr8_2:63842532-63842551 Msa1261470:intron 30.0%
! TTTTCTCCTCTTTTATGTGT+TGG - chr8_2:63842615-63842634 Msa1261470:intron 30.0%
ATGCTTGGAAATAAATGAGA+AGG + chr8_2:63842740-63842759 None:intergenic 30.0%
CAATCTCAAAATTTGATGCT+TGG + chr8_2:63842755-63842774 None:intergenic 30.0%
!! TTCTCTTTAAAGTGTTAGCA+CGG - chr8_2:63843454-63843473 Msa1261470:CDS 30.0%
GAAAATCAATTGCATGTCAT+TGG + chr8_2:63843497-63843516 None:intergenic 30.0%
CCTTTATGGAGCTTAATTAA+TGG + chr8_2:63843620-63843639 None:intergenic 30.0%
CCATTAATTAAGCTCCATAA+AGG - chr8_2:63843617-63843636 Msa1261470:CDS 30.0%
!!! TTTTTTGCCACCATAATCTA+TGG + chr8_2:63843667-63843686 None:intergenic 30.0%
AGATTATGGTGGCAAAAAAT+TGG - chr8_2:63843668-63843687 Msa1261470:CDS 30.0%
GAAATGCAAAAGTAGCTATT+AGG - chr8_2:63843725-63843744 Msa1261470:CDS 30.0%
! AAGTGAATTCCTTGTTATCA+AGG - chr8_2:63843748-63843767 Msa1261470:CDS 30.0%
! ATTCCTTGTTATCAAGGAAA+TGG - chr8_2:63843754-63843773 Msa1261470:CDS 30.0%
! TTGATTTGACCTTGTGAATA+TGG - chr8_2:63843831-63843850 Msa1261470:intron 30.0%
AAACCAATACCATATTCACA+AGG + chr8_2:63843843-63843862 None:intergenic 30.0%
!! TTGTGAATATGGTATTGGTT+TGG - chr8_2:63843842-63843861 Msa1261470:intron 30.0%
CAAGAAATAAGCTGGATTAT+AGG + chr8_2:63843901-63843920 None:intergenic 30.0%
!!! GTTAATTTTTGTTGGTTTGC+AGG - chr8_2:63843973-63843992 Msa1261470:CDS 30.0%
AAGATGAATCTTACCATACA+TGG + chr8_2:63844183-63844202 None:intergenic 30.0%
TGTATGGTAAGATTCATCTT+TGG - chr8_2:63844183-63844202 Msa1261470:CDS 30.0%
TTGGAAGAGAAAAAGAGTGA+AGG - chr8_2:63840409-63840428 Msa1261470:three_prime_UTR 35.0%
TTGTAACTTTCACAAACCCT+AGG - chr8_2:63840797-63840816 Msa1261470:intron 35.0%
GATGCTATCAACGATATGAA+CGG - chr8_2:63840829-63840848 Msa1261470:intron 35.0%
ATGATGAAAGGAATGGAGAT+TGG - chr8_2:63841094-63841113 Msa1261470:intron 35.0%
TGATGAAAGGAATGGAGATT+GGG - chr8_2:63841095-63841114 Msa1261470:intron 35.0%
! GATCATGGTAATGAGAAAGA+TGG - chr8_2:63841159-63841178 Msa1261470:intron 35.0%
GTAATGAGAAAGATGGATAC+AGG - chr8_2:63841166-63841185 Msa1261470:intron 35.0%
AAAGATGGATACAGGAATAG+AGG - chr8_2:63841174-63841193 Msa1261470:intron 35.0%
GAACACATGCTAGATTATGA+TGG - chr8_2:63841408-63841427 Msa1261470:intron 35.0%
AAAGCATGTTAGATCGTGAT+GGG - chr8_2:63841628-63841647 Msa1261470:intron 35.0%
GATGATGATTGGAATCATGA+CGG - chr8_2:63841828-63841847 Msa1261470:intron 35.0%
AAAATGAACTGGAAAACAGC+AGG - chr8_2:63841862-63841881 Msa1261470:intron 35.0%
AAATGAACTGGAAAACAGCA+GGG - chr8_2:63841863-63841882 Msa1261470:intron 35.0%
ATCCAGACAAAAAGATGGAT+AGG - chr8_2:63841928-63841947 Msa1261470:CDS 35.0%
! ATCCTATCCATCTTTTTGTC+TGG + chr8_2:63841933-63841952 None:intergenic 35.0%
ATTCAAACTGCAGGAAAATC+AGG + chr8_2:63842103-63842122 None:intergenic 35.0%
ATTTGTCACATTCAAACTGC+AGG + chr8_2:63842112-63842131 None:intergenic 35.0%
AATAGTCCATCAGATTCCAA+TGG - chr8_2:63842135-63842154 Msa1261470:intron 35.0%
ATAGTCCATCAGATTCCAAT+GGG - chr8_2:63842136-63842155 Msa1261470:intron 35.0%
ATCACATTACCTCATCATTG+TGG + chr8_2:63842164-63842183 None:intergenic 35.0%
! AAATAAACCGAGACTGATTC+TGG - chr8_2:63842256-63842275 Msa1261470:intron 35.0%
AGGTAGAAGATGAATTAGAG+AGG - chr8_2:63842318-63842337 Msa1261470:intron 35.0%
GCTTGATCAACTAAAAAAGG+AGG - chr8_2:63842352-63842371 Msa1261470:intron 35.0%
TCTGAACATGTGCATTTCAA+AGG - chr8_2:63842496-63842515 Msa1261470:intron 35.0%
! TTAAAGATTAGAGCGCTTGT+TGG + chr8_2:63842587-63842606 None:intergenic 35.0%
! CTGAAAAGTGGAATTTTGTC+AGG - chr8_2:63842643-63842662 Msa1261470:CDS 35.0%
! ATTTTGTCAGGTTTCTAAGC+TGG - chr8_2:63842655-63842674 Msa1261470:CDS 35.0%
TGTGTTCAAAGTAAGGATGT+TGG + chr8_2:63842790-63842809 None:intergenic 35.0%
! CAGCTTTTGTGTTCAAAGTA+AGG + chr8_2:63842797-63842816 None:intergenic 35.0%
GAAGATATTTACCGCAGAAA+CGG - chr8_2:63842834-63842853 Msa1261470:CDS 35.0%
AAGATATTTACCGCAGAAAC+GGG - chr8_2:63842835-63842854 Msa1261470:CDS 35.0%
ATATTGCTAACATTGGGCTT+GGG - chr8_2:63842964-63842983 Msa1261470:CDS 35.0%
!!! ACTGGTTTTAAGTCTTTCTG+TGG + chr8_2:63843035-63843054 None:intergenic 35.0%
TAAATCTCACAATGTGGCTT+AGG - chr8_2:63843144-63843163 Msa1261470:CDS 35.0%
! GAAAATTCTCTGCAGTTTTG+TGG - chr8_2:63843211-63843230 Msa1261470:CDS 35.0%
!! TCTCTTTAAAGTGTTAGCAC+GGG - chr8_2:63843455-63843474 Msa1261470:CDS 35.0%
CCATAATCTATGGCATAAGA+TGG + chr8_2:63843657-63843676 None:intergenic 35.0%
CCATCTTATGCCATAGATTA+TGG - chr8_2:63843654-63843673 Msa1261470:CDS 35.0%
TCTTATGCCATAGATTATGG+TGG - chr8_2:63843657-63843676 Msa1261470:CDS 35.0%
AGAGATCTTTCAAATCTCAG+GGG + chr8_2:63843793-63843812 None:intergenic 35.0%
CAGAGATCTTTCAAATCTCA+GGG + chr8_2:63843794-63843813 None:intergenic 35.0%
TCAGAGATCTTTCAAATCTC+AGG + chr8_2:63843795-63843814 None:intergenic 35.0%
GAGATTTGAAAGATCTCTGA+TGG - chr8_2:63843795-63843814 Msa1261470:CDS 35.0%
TGACCTTGTGAATATGGTAT+TGG - chr8_2:63843837-63843856 Msa1261470:intron 35.0%
!! CGTATTTACTTAACTTGTGC+TGG - chr8_2:63843937-63843956 Msa1261470:intron 35.0%
TCAATATTGTTCGAGAGTGA+CGG - chr8_2:63844007-63844026 Msa1261470:CDS 35.0%
CTTACAAATGGAAGTCTAGA+TGG - chr8_2:63844055-63844074 Msa1261470:intron 35.0%
GACAACACATGGTACAAAAA+TGG + chr8_2:63844122-63844141 None:intergenic 35.0%
GCAATTAAAGAGACAACACA+TGG + chr8_2:63844133-63844152 None:intergenic 35.0%
TTGTCTCTTTAATTGCCTAG+TGG - chr8_2:63844137-63844156 Msa1261470:intron 35.0%
GTGAGATAGTAAAAACCACT+AGG + chr8_2:63844155-63844174 None:intergenic 35.0%
AAGATTATAGCACTGCTTGT+TGG + chr8_2:63844259-63844278 None:intergenic 35.0%
GGCTGATATGTAGAGAAAAA+AGG - chr8_2:63844339-63844358 Msa1261470:five_prime_UTR 35.0%
ATATGTAGAGAAAAAAGGCC+TGG - chr8_2:63844344-63844363 Msa1261470:five_prime_UTR 35.0%
AGAGTGAAGGAGAAAGACTA+TGG - chr8_2:63840422-63840441 Msa1261470:three_prime_UTR 40.0%
TCAGTTCCACAAAATGACAC+TGG - chr8_2:63840496-63840515 Msa1261470:three_prime_UTR 40.0%
GATGATAGCTCCATTTACGT+TGG - chr8_2:63840521-63840540 Msa1261470:three_prime_UTR 40.0%
AGTGCGAATTGTTTCATCAG+TGG + chr8_2:63840564-63840583 None:intergenic 40.0%
CGCACTGTCTTCAATTTGTA+TGG - chr8_2:63840578-63840597 Msa1261470:three_prime_UTR 40.0%
GACTACCTTGACATCAAGAA+TGG + chr8_2:63840606-63840625 None:intergenic 40.0%
ATCAATGACCAACGTACACT+TGG - chr8_2:63840760-63840779 Msa1261470:CDS 40.0%
TCAATGACCAACGTACACTT+GGG - chr8_2:63840761-63840780 Msa1261470:CDS 40.0%
TAGCATCAATTGCAGACCTA+GGG + chr8_2:63840816-63840835 None:intergenic 40.0%
ATAGCATCAATTGCAGACCT+AGG + chr8_2:63840817-63840836 None:intergenic 40.0%
TGGTAATTATTGTTGTGCCG+TGG - chr8_2:63840910-63840929 Msa1261470:intron 40.0%
GCCGTGTGGTTAAAGTTAAT+GGG - chr8_2:63840989-63841008 Msa1261470:intron 40.0%
CCCCATTAACTTTAACCACA+CGG + chr8_2:63840993-63841012 None:intergenic 40.0%
CCGTGTGGTTAAAGTTAATG+GGG - chr8_2:63840990-63841009 Msa1261470:intron 40.0%
TGGTTAAAGTTAATGGGGTG+AGG - chr8_2:63840995-63841014 Msa1261470:intron 40.0%
! GTGGTGGCAGATCAAATTTT+GGG - chr8_2:63841043-63841062 Msa1261470:intron 40.0%
CGAGACCAAGATTATGATCA+TGG - chr8_2:63841144-63841163 Msa1261470:intron 40.0%
TTCTATCCCTATCCCTATCA+TGG + chr8_2:63841290-63841309 None:intergenic 40.0%
AAAGCATGTTAGTCCGTGAT+AGG - chr8_2:63841349-63841368 Msa1261470:intron 40.0%
CAAGCTAGAGCAAGTATGTT+AGG - chr8_2:63841432-63841451 Msa1261470:intron 40.0%
TTCTATCCCTATCCCTATCA+TGG + chr8_2:63841290-63841309 None:intergenic 40.0%
! CAACTTTTATACCCCTGTCA+CGG + chr8_2:63841575-63841594 None:intergenic 40.0%
! GAAAGCATGTTAGATCGTGA+TGG - chr8_2:63841627-63841646 Msa1261470:intron 40.0%
TTCTACTCCTATCTCTGTCA+CGG + chr8_2:63841662-63841681 None:intergenic 40.0%
AGAAGAGTTGAGCATTTGCA+AGG - chr8_2:63841678-63841697 Msa1261470:intron 40.0%
TATCCCTAACCATGATGTCA+CGG + chr8_2:63841755-63841774 None:intergenic 40.0%
ATTGGAATCATGACGGTGAT+AGG - chr8_2:63841835-63841854 Msa1261470:intron 40.0%
TTGGAATCATGACGGTGATA+GGG - chr8_2:63841836-63841855 Msa1261470:intron 40.0%
TGATAGGGCTGAAAATGAAC+TGG - chr8_2:63841851-63841870 Msa1261470:intron 40.0%
TAAGGACCGTAACTTAGATG+TGG - chr8_2:63841905-63841924 Msa1261470:CDS 40.0%
CTGGATCCACATCTAAGTTA+CGG + chr8_2:63841914-63841933 None:intergenic 40.0%
TGTGGATCCAGACAAAAAGA+TGG - chr8_2:63841923-63841942 Msa1261470:CDS 40.0%
TCTTACTCGATGTTTCTCCT+CGG + chr8_2:63841999-63842018 None:intergenic 40.0%
TAGTCCATCAGATTCCAATG+GGG - chr8_2:63842137-63842156 Msa1261470:intron 40.0%
AAATGTGCCAGAATCAGTCT+CGG + chr8_2:63842266-63842285 None:intergenic 40.0%
!! TACTTGCTTTTGTGGTCTTC+AGG - chr8_2:63842298-63842317 Msa1261470:intron 40.0%
! TCTCCTCTTTTATGTGTTGG+TGG - chr8_2:63842618-63842637 Msa1261470:intron 40.0%
!! GGAGTTACAAAAGCACTCTA+AGG - chr8_2:63842712-63842731 Msa1261470:intron 40.0%
GATATTGCTAACATTGGGCT+TGG - chr8_2:63842963-63842982 Msa1261470:CDS 40.0%
AGAAAACATTCATGCAGCTG+AGG + chr8_2:63842998-63843017 None:intergenic 40.0%
AACCAGTGAAAAAGAACTCC+AGG - chr8_2:63843048-63843067 Msa1261470:CDS 40.0%
!! AACCTGGAGTTCTTTTTCAC+TGG + chr8_2:63843053-63843072 None:intergenic 40.0%
TATATGGTGCAGTTGTATGC+AGG - chr8_2:63843311-63843330 Msa1261470:CDS 40.0%
! GCACGGGTATTTGTATTTTG+AGG - chr8_2:63843471-63843490 Msa1261470:CDS 40.0%
ACTTATGCGCGAAGTTGTAA+TGG - chr8_2:63843703-63843722 Msa1261470:CDS 40.0%
! CAGCCATTTCCTTGATAACA+AGG + chr8_2:63843760-63843779 None:intergenic 40.0%
GGTCTTGGACAACTTACAAA+TGG - chr8_2:63844043-63844062 Msa1261470:intron 40.0%
TATCTCACTAGCTCCATGTA+TGG - chr8_2:63844167-63844186 Msa1261470:intron 40.0%
TTAGCATATGGCATCTTACC+TGG - chr8_2:63844317-63844336 Msa1261470:five_prime_UTR 40.0%
TAGCATATGGCATCTTACCT+GGG - chr8_2:63844318-63844337 Msa1261470:five_prime_UTR 40.0%
! TTTTCTCTACATATCAGCCC+AGG + chr8_2:63844338-63844357 None:intergenic 40.0%
!!! CATCGTCCAGTGTCATTTTG+TGG + chr8_2:63840505-63840524 None:intergenic 45.0%
GATAGCTCCATTTACGTTGG+TGG - chr8_2:63840524-63840543 Msa1261470:three_prime_UTR 45.0%
AGCATTTCCCAAGTGTACGT+TGG + chr8_2:63840771-63840790 None:intergenic 45.0%
TCAGACTATTAATGGCCGTG+TGG - chr8_2:63840975-63840994 Msa1261470:intron 45.0%
GGCCGTGTGGTTAAAGTTAA+TGG - chr8_2:63840988-63841007 Msa1261470:intron 45.0%
!! GGTGGTGGCAGATCAAATTT+TGG - chr8_2:63841042-63841061 Msa1261470:intron 45.0%
ACAGGAATAGAGGCAGTGAT+TGG - chr8_2:63841184-63841203 Msa1261470:intron 45.0%
ATAGGTCTCGAGACCATGAT+AGG - chr8_2:63841274-63841293 Msa1261470:intron 45.0%
TAGGTCTCGAGACCATGATA+GGG - chr8_2:63841275-63841294 Msa1261470:intron 45.0%
TCGAGACCATGATAGGGATA+GGG - chr8_2:63841281-63841300 Msa1261470:intron 45.0%
TTCTATCCCTATCCCTGTCA+CGG + chr8_2:63841383-63841402 None:intergenic 45.0%
ATAGATCCCGAGACCATGAT+AGG - chr8_2:63841460-63841479 Msa1261470:intron 45.0%
TAGATCCCGAGACCATGATA+GGG - chr8_2:63841461-63841480 Msa1261470:intron 45.0%
AAAGCATGTTAGACCGCGAT+GGG - chr8_2:63841721-63841740 Msa1261470:intron 45.0%
TAACCATGATGTCACGGTCT+CGG + chr8_2:63841749-63841768 None:intergenic 45.0%
AGACCGTGACATCATGGTTA+GGG - chr8_2:63841749-63841768 Msa1261470:CDS 45.0%
GCACCACCAACACATAAAAG+AGG + chr8_2:63842624-63842643 None:intergenic 45.0%
TCAGGTTTCTAAGCTGGAAG+AGG - chr8_2:63842661-63842680 Msa1261470:CDS 45.0%
CAGGTTTCTAAGCTGGAAGA+GGG - chr8_2:63842662-63842681 Msa1261470:CDS 45.0%
TTCTAAGCTGGAAGAGGGAT+TGG - chr8_2:63842667-63842686 Msa1261470:intron 45.0%
ATATTTACCGCAGAAACGGG+AGG - chr8_2:63842838-63842857 Msa1261470:CDS 45.0%
TTACCTTGGTCAACTGCATC+TGG + chr8_2:63842901-63842920 None:intergenic 45.0%
!! TAAAAAAAAATACAATAATA+TGG + chr8_2:63840871-63840890 None:intergenic 5.0%
!! AAAGTAAAATTAATAATAAA+TGG + chr8_2:63843245-63843264 None:intergenic 5.0%
GGGAAGACCACCAACGTAAA+TGG + chr8_2:63840534-63840553 None:intergenic 50.0%
! GTTTCATCAGTGGCGTCGAA+GGG + chr8_2:63840554-63840573 None:intergenic 50.0%
! TGTTTCATCAGTGGCGTCGA+AGG + chr8_2:63840555-63840574 None:intergenic 50.0%
TGGCGCCATTCTTGATGTCA+AGG - chr8_2:63840598-63840617 Msa1261470:three_prime_UTR 50.0%
AGGAATGGAGATTGGGATCG+TGG - chr8_2:63841102-63841121 Msa1261470:intron 50.0%
AATGGAGATTGGGATCGTGG+CGG - chr8_2:63841105-63841124 Msa1261470:intron 50.0%
ATTGGACCAGAGGTGGTGAT+TGG - chr8_2:63841202-63841221 Msa1261470:intron 50.0%
ATTGGACTCGACAGCATCAG+AGG - chr8_2:63841220-63841239 Msa1261470:intron 50.0%
CATGGTCTCGAGACCTATCA+CGG + chr8_2:63841272-63841291 None:intergenic 50.0%
CTCGAGACCATGATAGGGAT+AGG - chr8_2:63841280-63841299 Msa1261470:intron 50.0%
CCTATCCCTATCATGGTCTC+GGG + chr8_2:63841283-63841302 None:intergenic 50.0%
CCCTATCCCTATCATGGTCT+CGG + chr8_2:63841284-63841303 None:intergenic 50.0%
CCGAGACCATGATAGGGATA+GGG - chr8_2:63841467-63841486 Msa1261470:intron 50.0%
AAAGCGCGTTAGACCGTGAT+AGG - chr8_2:63841535-63841554 Msa1261470:intron 50.0%
TTATACCCCTGTCACGGTCA+CGG + chr8_2:63841569-63841588 None:intergenic 50.0%
TCCTATCTCTGTCACGGTCT+CGG + chr8_2:63841656-63841675 None:intergenic 50.0%
! GAAAGCATGTTAGACCGCGA+TGG - chr8_2:63841720-63841739 Msa1261470:intron 50.0%
AACCATGATGTCACGGTCTC+GGG + chr8_2:63841748-63841767 None:intergenic 50.0%
GAGACCGTGACATCATGGTT+AGG - chr8_2:63841748-63841767 Msa1261470:CDS 50.0%
ACTGGAAAACAGCAGGGTAC+AGG - chr8_2:63841869-63841888 Msa1261470:intron 50.0%
CTGGAAAACAGCAGGGTACA+GGG - chr8_2:63841870-63841889 Msa1261470:intron 50.0%
ACAGGGTGGAGATGTGGATA+AGG - chr8_2:63841887-63841906 Msa1261470:CDS 50.0%
TGGTCCCCATTGGAATCTGA+TGG + chr8_2:63842144-63842163 None:intergenic 50.0%
CTCATCATTGTGGTCCCCAT+TGG + chr8_2:63842154-63842173 None:intergenic 50.0%
CAATGGGGACCACAATGATG+AGG - chr8_2:63842152-63842171 Msa1261470:intron 50.0%
! ATGGCGATGTCTGCTCTAGA+AGG - chr8_2:63842425-63842444 Msa1261470:CDS 50.0%
!! GTGTTGGTGGTGCTGAAAAG+TGG - chr8_2:63842631-63842650 Msa1261470:CDS 50.0%
TTGTTCGAGAGTGACGGTGA+TGG - chr8_2:63844013-63844032 Msa1261470:CDS 50.0%
GTTAATGGGGTGAGGTCTCG+TGG - chr8_2:63841003-63841022 Msa1261470:intron 55.0%
AGAGGCAGTGATTGGACCAG+AGG - chr8_2:63841192-63841211 Msa1261470:intron 55.0%
TCGAGTCCAATCACCACCTC+TGG + chr8_2:63841211-63841230 None:intergenic 55.0%
AGAGGTCTCGAGACCGTGAT+AGG - chr8_2:63841238-63841257 Msa1261470:intron 55.0%
CCCGAGACCATGATAGGGAT+AGG - chr8_2:63841466-63841485 Msa1261470:intron 55.0%
CCTATCTCTGTCACGGTCTC+GGG + chr8_2:63841655-63841674 None:intergenic 55.0%
GAAAACAGCAGGGTACAGGG+TGG - chr8_2:63841873-63841892 Msa1261470:intron 55.0%
ACAGCATCCTCCCGTTTCTG+CGG + chr8_2:63842848-63842867 None:intergenic 55.0%
TCGCCAGATGCAGTTGACCA+AGG - chr8_2:63842895-63842914 Msa1261470:CDS 55.0%
! GAGAGTGACGGTGATGGTGA+TGG - chr8_2:63844019-63844038 Msa1261470:CDS 55.0%
!! AGTGACGGTGATGGTGATGG+TGG - chr8_2:63844022-63844041 Msa1261470:CDS 55.0%
!! GGTGATGGTGATGGTGGTCT+TGG - chr8_2:63844028-63844047 Msa1261470:intron 55.0%
AATGGGGTGAGGTCTCGTGG+CGG - chr8_2:63841006-63841025 Msa1261470:intron 60.0%
GGCAGTGATTGGACCAGAGG+TGG - chr8_2:63841195-63841214 Msa1261470:intron 60.0%
ATAGGTCCCGCGACCGTGAT+AGG - chr8_2:63841256-63841275 Msa1261470:intron 60.0%
TCGAGACCTATCACGGTCGC+GGG + chr8_2:63841265-63841284 None:intergenic 60.0%
CTCGAGACCTATCACGGTCG+CGG + chr8_2:63841266-63841285 None:intergenic 60.0%
CACGGTCTCGGGACCTATCA+CGG + chr8_2:63841365-63841384 None:intergenic 60.0%
ATAGGTCCCGAGACCGTGAC+AGG - chr8_2:63841367-63841386 Msa1261470:intron 60.0%
TAGGTCCCGAGACCGTGACA+GGG - chr8_2:63841368-63841387 Msa1261470:intron 60.0%
CCTATCCCTGTCACGGTCTC+GGG + chr8_2:63841376-63841395 None:intergenic 60.0%
CCCTATCCCTGTCACGGTCT+CGG + chr8_2:63841377-63841396 None:intergenic 60.0%
CCGAGACCGTGACAGGGATA+GGG - chr8_2:63841374-63841393 Msa1261470:intron 60.0%
CACGGTCTCGGGACCTATCA+CGG + chr8_2:63841365-63841384 None:intergenic 60.0%
CCCGAGACCGTGACAGAGAT+AGG - chr8_2:63841652-63841671 Msa1261470:intron 60.0%
GTCCCGAGACCGTGACATCA+TGG - chr8_2:63841743-63841762 Msa1261470:CDS 60.0%
CAGGGTACAGGGTGGAGATG+TGG - chr8_2:63841881-63841900 Msa1261470:intron 60.0%
CACGGTCGCGGGACCTATCA+CGG + chr8_2:63841254-63841273 None:intergenic 65.0%
CCCGAGACCGTGACAGGGAT+AGG - chr8_2:63841373-63841392 Msa1261470:intron 65.0%
CCTGTCACGGTCACGGTCTC+GGG + chr8_2:63841562-63841581 None:intergenic 65.0%
CCCTGTCACGGTCACGGTCT+CGG + chr8_2:63841563-63841582 None:intergenic 65.0%
CCGAGACCGTGACCGTGACA+GGG - chr8_2:63841560-63841579 Msa1261470:intron 65.0%
CGAGACCGTGACCGTGACAG+GGG - chr8_2:63841561-63841580 Msa1261470:intron 65.0%
GTGAGGTCTCGTGGCGGTGG+AGG - chr8_2:63841012-63841031 Msa1261470:intron 70.0%
AGGTCTCGTGGCGGTGGAGG+TGG - chr8_2:63841015-63841034 Msa1261470:intron 70.0%
TCTCGTGGCGGTGGAGGTGG+CGG - chr8_2:63841018-63841037 Msa1261470:intron 70.0%
CCCGAGACCGTGACCGTGAC+AGG - chr8_2:63841559-63841578 Msa1261470:intron 70.0%
CACGGTCTCGGGACCCATCG+CGG + chr8_2:63841737-63841756 None:intergenic 70.0%
GGGGTGAGGTCTCGTGGCGG+TGG - chr8_2:63841009-63841028 Msa1261470:intron 75.0%
! GGTGGAGGTGGCGGTGGTGG+TGG - chr8_2:63841027-63841046 Msa1261470:intron 75.0%
!! CGTGGCGGTGGAGGTGGCGG+TGG - chr8_2:63841021-63841040 Msa1261470:intron 80.0%
!! GGCGGTGGAGGTGGCGGTGG+TGG - chr8_2:63841024-63841043 Msa1261470:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 63840403 63844395 63840403 ID=Msa1261470;Name=Msa1261470
chr8_2 mRNA 63840403 63844395 63840403 ID=Msa1261470-mRNA-1;Parent=Msa1261470;Name=Msa1261470-mRNA-1;_AED=0.10;_eAED=0.10;_QI=106|1|0.88|1|1|1|9|311|549
chr8_2 exon 63840403 63840803 63840403 ID=Msa1261470-mRNA-1:exon:20656;Parent=Msa1261470-mRNA-1
chr8_2 exon 63841729 63841797 63841729 ID=Msa1261470-mRNA-1:exon:20655;Parent=Msa1261470-mRNA-1
chr8_2 exon 63841882 63841947 63841882 ID=Msa1261470-mRNA-1:exon:20654;Parent=Msa1261470-mRNA-1
chr8_2 exon 63842065 63842133 63842065 ID=Msa1261470-mRNA-1:exon:20653;Parent=Msa1261470-mRNA-1
chr8_2 exon 63842425 63842478 63842425 ID=Msa1261470-mRNA-1:exon:20652;Parent=Msa1261470-mRNA-1
chr8_2 exon 63842625 63842682 63842625 ID=Msa1261470-mRNA-1:exon:20651;Parent=Msa1261470-mRNA-1
chr8_2 exon 63842786 63843819 63842786 ID=Msa1261470-mRNA-1:exon:20650;Parent=Msa1261470-mRNA-1
chr8_2 exon 63843943 63844041 63843943 ID=Msa1261470-mRNA-1:exon:20649;Parent=Msa1261470-mRNA-1
chr8_2 exon 63844179 63844395 63844179 ID=Msa1261470-mRNA-1:exon:20648;Parent=Msa1261470-mRNA-1
chr8_2 five_prime_UTR 63844290 63844395 63844290 ID=Msa1261470-mRNA-1:five_prime_utr;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63844179 63844289 63844179 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63843943 63844041 63843943 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63842786 63843819 63842786 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63842625 63842682 63842625 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63842425 63842478 63842425 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63842065 63842133 63842065 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63841882 63841947 63841882 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63841729 63841797 63841729 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 CDS 63840714 63840803 63840714 ID=Msa1261470-mRNA-1:cds;Parent=Msa1261470-mRNA-1
chr8_2 three_prime_UTR 63840403 63840713 63840403 ID=Msa1261470-mRNA-1:three_prime_utr;Parent=Msa1261470-mRNA-1
Gene Sequence

>Msa1261470

ATGACACTGGACGATGATAGCTCCATTTACGTTGGTGGTCTTCCCTTCGACGCCACTGATGAAACAATTCGCACTGTCTTCAATTTGTATGGCGCCATTCTTGATGTCAAGATTATCAATGACCAACGTACACTTGGGAAATGCTATTGTTTTGTAACTTTCACAAACCCTAGGTCTGCAATTGATGCTATCAACGATATGAACGGAAGAACTATTAATGGCCGTGTGGTTAAAGTTAATGGGGTGAGGTCTCGTGGCGGTGGAGGTGGCGGTGGTGGTGGCAGATCAAATTTTGGGAGAGAAAGAGAACGTTATTATCATCATAATGATGAAAGGAATGGAGATTGGGATCGTGGCGGCAGAGATCGAGAGATTCGAGACCAAGATTATGATCATGGTAATGAGAAAGATGGATACAGGAATAGAGGCAGTGATTGGACCAGAGGTGGTGATTGGACTCGACAGCATCAGAGGTCTCGAGACCGTGATAGGTCCCGCGACCGTGATAGGTCTCGAGACCATGATAGGGATAGGGATAGAAGAGCCGAGCATATGCAAAATTATGATGGTCTAGCTAGAGAAAGCATGTTAGTCCGTGATAGGTCCCGAGACCGTGACAGGGATAGGGATAGAAGAGTTGAACACATGCTAGATTATGATGGTCAAGCTAGAGCAAGTATGTTAGGTCGTGATAGATCCCGAGACCATGATAGGGATAGGGATAGAAGAGTTGAACATATGCAAGATTATGATGATCAAGCTAGAGAAAGCGCGTTAGACCGTGATAGGTCCCGAGACCGTGACCGTGACAGGGGTATAAAAGTTGAGCATTTGCAAGATTATGACGATCAAGCTAGAGAAAGCATGTTAGATCGTGATGGGTCCCGAGACCGTGACAGAGATAGGAGTAGAAGAGTTGAGCATTTGCAAGGTTATGATGATCAAGCTAGAGAAAGCATGTTAGACCGCGATGGGTCCCGAGACCGTGACATCATGGTTAGGGATAGAAGAGTTGAACATTTGCAAGATTATGATGATCAACATAGAGAAAGCATGTTAGATGATGATTGGAATCATGACGGTGATAGGGCTGAAAATGAACTGGAAAACAGCAGGGTACAGGGTGGAGATGTGGATAAGGACCGTAACTTAGATGTGGATCCAGACAAAAAGATGGATAGGATTAGTGATCCTGATAAAAGTTTTGACGAACATAAAAAAGAACAACCGAGGAGAAACATCGATTTGAATGTGACAAATCAAAATAGTCCATCAGATTCCAATGGGGACCACAATGATGAGGTAGAAGATGAATTAGAGAGGTCAATTCAACTGCTTGATCAACTAAAAAAGGAGGTTTCTAAGCTGGAAGAGGGATTGGAAGAAAGAAGACTTAATGTTATGGAGTTACAAAAGCACTCTAAGAAACGGGAGGATGCTGTGATTACTGCAAAGAAAAAATCTTTATATCGCCAGATGCAGTTGACCAAGCTGCATGAATGTTTTCTGCAAGTGCACGATTCCACAGAAAGACTTAAAACCAGTGAAAAAGAACTCCAGGCTCTAGTTGAATCAATATTGTTCGAGAGTGACGGTGATGGTGATGGTGGTCTTGGACAACTTACAAATGGAAGTCTAGATGGTAGATAG

Protein sequence

>Msa1261470

MTLDDDSSIYVGGLPFDATDETIRTVFNLYGAILDVKIINDQRTLGKCYCFVTFTNPRSAIDAINDMNGRTINGRVVKVNGVRSRGGGGGGGGGRSNFGRERERYYHHNDERNGDWDRGGRDREIRDQDYDHGNEKDGYRNRGSDWTRGGDWTRQHQRSRDRDRSRDRDRSRDHDRDRDRRAEHMQNYDGLARESMLVRDRSRDRDRDRDRRVEHMLDYDGQARASMLGRDRSRDHDRDRDRRVEHMQDYDDQARESALDRDRSRDRDRDRGIKVEHLQDYDDQARESMLDRDGSRDRDRDRSRRVEHLQGYDDQARESMLDRDGSRDRDIMVRDRRVEHLQDYDDQHRESMLDDDWNHDGDRAENELENSRVQGGDVDKDRNLDVDPDKKMDRISDPDKSFDEHKKEQPRRNIDLNVTNQNSPSDSNGDHNDEVEDELERSIQLLDQLKKEVSKLEEGLEERRLNVMELQKHSKKREDAVITAKKKSLYRQMQLTKLHECFLQVHDSTERLKTSEKELQALVESILFESDGDGDGGLGQLTNGSLDGR*