Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321450 | XP_003598604.2 | 62.169 | 378 | 105 | 5 | 3 | 343 | 4 | 380 | 2.24e-154 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321450 | sp|Q8GYH5|BAD1_ARATH | 34.740 | 308 | 166 | 7 | 5 | 282 | 2 | 304 | 1.01e-49 | 175 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321450 | G7IYT6 | 62.169 | 378 | 105 | 5 | 3 | 343 | 4 | 380 | 1.07e-154 | 452 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0059880 | Msa1321450 | 0.826120 | 3.229380e-54 | -8.615850e-47 |
| Msa0605470 | Msa1321450 | 0.810205 | 1.294339e-50 | -8.615850e-47 |
| Msa0640290 | Msa1321450 | 0.817697 | 2.882986e-52 | -8.615850e-47 |
| Msa0645060 | Msa1321450 | 0.801611 | 8.298402e-49 | -8.615850e-47 |
| Msa0646210 | Msa1321450 | 0.802410 | 5.685163e-49 | -8.615850e-47 |
| Msa0671490 | Msa1321450 | 0.805066 | 1.597374e-49 | -8.615850e-47 |
| Msa0727480 | Msa1321450 | 0.804833 | 1.786829e-49 | -8.615850e-47 |
| Msa0777070 | Msa1321450 | 0.807035 | 6.153384e-50 | -8.615850e-47 |
| Msa0787860 | Msa1321450 | 0.801825 | 7.499290e-49 | -8.615850e-47 |
| Msa0150910 | Msa1321450 | 0.811508 | 6.759341e-51 | -8.615850e-47 |
| Msa1321450 | Msa1323030 | 0.809713 | 1.651423e-50 | -8.615850e-47 |
| Msa1321450 | Msa1323160 | 0.814401 | 1.569582e-51 | -8.615850e-47 |
| Msa1321450 | Msa1373560 | 0.807405 | 5.135645e-50 | -8.615850e-47 |
| Msa1321450 | Msa1376070 | 0.812224 | 4.721100e-51 | -8.615850e-47 |
| Msa1321450 | Msa1377520 | 0.804104 | 2.535256e-49 | -8.615850e-47 |
| Msa1321450 | Msa1411550 | 0.801748 | 7.778910e-49 | -8.615850e-47 |
| Msa1321450 | Msa1445900 | 0.803934 | 2.750576e-49 | -8.615850e-47 |
| Msa1321450 | Msa1456600 | 0.818360 | 2.041395e-52 | -8.615850e-47 |
| Msa1321450 | Msa1459610 | 0.807430 | 5.074972e-50 | -8.615850e-47 |
| Msa0985700 | Msa1321450 | 0.833027 | 6.750122e-56 | -8.615850e-47 |
| Msa1024350 | Msa1321450 | 0.802368 | 5.799121e-49 | -8.615850e-47 |
| Msa1026050 | Msa1321450 | 0.825324 | 4.988052e-54 | -8.615850e-47 |
| Msa1061670 | Msa1321450 | 0.809707 | 1.656383e-50 | -8.615850e-47 |
| Msa1076830 | Msa1321450 | 0.807528 | 4.837750e-50 | -8.615850e-47 |
| Msa1087380 | Msa1321450 | 0.808198 | 3.483937e-50 | -8.615850e-47 |
| Msa1104960 | Msa1321450 | 0.822087 | 2.858130e-53 | -8.615850e-47 |
| Msa1106960 | Msa1321450 | 0.802984 | 4.328795e-49 | -8.615850e-47 |
| Msa0266640 | Msa1321450 | 0.803078 | 4.138489e-49 | -8.615850e-47 |
| Msa0266650 | Msa1321450 | 0.804892 | 1.736599e-49 | -8.615850e-47 |
| Msa0272210 | Msa1321450 | 0.803699 | 3.077909e-49 | -8.615850e-47 |
| Msa0343720 | Msa1321450 | 0.828841 | 7.184900e-55 | -8.615850e-47 |
| Msa1109880 | Msa1321450 | 0.813702 | 2.238790e-51 | -8.615850e-47 |
| Msa1109890 | Msa1321450 | 0.835204 | 1.922983e-56 | -8.615850e-47 |
| Msa1216600 | Msa1321450 | 0.801457 | 8.922709e-49 | -8.615850e-47 |
| Msa0533510 | Msa1321450 | 0.803292 | 3.736966e-49 | -8.615850e-47 |
| Msa0533520 | Msa1321450 | 0.806639 | 7.462105e-50 | -8.615850e-47 |
| Msa0538450 | Msa1321450 | 0.800384 | 1.477916e-48 | -8.615850e-47 |
| Msa0864160 | Msa1321450 | 0.801585 | 8.398818e-49 | -8.615850e-47 |
| Msa0883640 | Msa1321450 | 0.835229 | 1.895214e-56 | -8.615850e-47 |
| Msa0902340 | Msa1321450 | 0.821903 | 3.152744e-53 | -8.615850e-47 |
| Msa0910830 | Msa1321450 | 0.845779 | 3.282297e-59 | -8.615850e-47 |
| Msa0933580 | Msa1321450 | 0.811245 | 7.710868e-51 | -8.615850e-47 |
| Msa0933590 | Msa1321450 | 0.820249 | 7.579085e-53 | -8.615850e-47 |
| Msa0933610 | Msa1321450 | 0.801712 | 7.910131e-49 | -8.615850e-47 |
| Msa0960090 | Msa1321450 | 0.836775 | 7.676877e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321450 | MtrunA17_Chr3g0083331 | 62.169 | 378 | 105 | 5 | 3 | 343 | 4 | 380 | 2.06e-158 | 452 |
| Msa1321450 | MtrunA17_Chr8g0369921 | 63.912 | 363 | 108 | 4 | 3 | 343 | 4 | 365 | 5.76e-154 | 441 |
| Msa1321450 | MtrunA17_Chr7g0233331 | 62.740 | 365 | 113 | 4 | 1 | 343 | 1 | 364 | 1.38e-150 | 430 |
| Msa1321450 | MtrunA17_Chr8g0353311 | 63.510 | 359 | 106 | 4 | 10 | 343 | 14 | 372 | 9.51e-150 | 429 |
| Msa1321450 | MtrunA17_Chr8g0367671 | 61.667 | 360 | 110 | 6 | 10 | 343 | 12 | 369 | 2.03e-148 | 426 |
| Msa1321450 | MtrunA17_Chr1g0178581 | 63.989 | 361 | 105 | 5 | 1 | 336 | 1 | 361 | 1.11e-147 | 424 |
| Msa1321450 | MtrunA17_Chr7g0221531 | 60.163 | 369 | 111 | 7 | 1 | 343 | 1 | 359 | 1.62e-142 | 410 |
| Msa1321450 | MtrunA17_Chr8g0364031 | 62.192 | 365 | 106 | 6 | 3 | 343 | 4 | 360 | 7.64e-142 | 409 |
| Msa1321450 | MtrunA17_Chr3g0093531 | 64.557 | 316 | 102 | 3 | 37 | 342 | 1 | 316 | 2.31e-141 | 406 |
| Msa1321450 | MtrunA17_Chr8g0354071 | 64.241 | 316 | 103 | 3 | 37 | 342 | 1 | 316 | 4.31e-141 | 405 |
| Msa1321450 | MtrunA17_Chr8g0370361 | 57.471 | 348 | 123 | 6 | 1 | 325 | 1 | 346 | 5.36e-130 | 380 |
| Msa1321450 | MtrunA17_Chr8g0361991 | 53.406 | 367 | 138 | 5 | 10 | 343 | 11 | 377 | 2.32e-120 | 355 |
| Msa1321450 | MtrunA17_Chr8g0368621 | 59.150 | 306 | 101 | 5 | 9 | 291 | 6 | 310 | 4.67e-116 | 339 |
| Msa1321450 | MtrunA17_Chr8g0366431 | 58.736 | 269 | 102 | 3 | 82 | 342 | 19 | 286 | 1.62e-100 | 301 |
| Msa1321450 | MtrunA17_Chr3g0136651 | 43.646 | 362 | 147 | 7 | 10 | 340 | 5 | 340 | 1.12e-86 | 268 |
| Msa1321450 | MtrunA17_Chr8g0370381 | 55.828 | 163 | 44 | 3 | 37 | 179 | 1 | 155 | 6.53e-52 | 171 |
| Msa1321450 | MtrunA17_Chr8g0370371 | 49.515 | 103 | 44 | 4 | 245 | 342 | 1 | 100 | 3.90e-20 | 87.0 |
| Msa1321450 | MtrunA17_Chr1g0212971 | 24.403 | 377 | 208 | 11 | 6 | 338 | 131 | 474 | 6.97e-16 | 79.0 |
| Msa1321450 | MtrunA17_Chr2g0331201 | 25.806 | 248 | 149 | 6 | 36 | 258 | 147 | 384 | 1.04e-11 | 66.2 |
| Msa1321450 | MtrunA17_Chr7g0276681 | 24.653 | 288 | 176 | 7 | 29 | 287 | 118 | 393 | 5.73e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321450 | AT4G10720.1 | 34.530 | 362 | 193 | 6 | 13 | 343 | 8 | 356 | 3.91e-62 | 206 |
| Msa1321450 | AT4G10720.2 | 36.593 | 317 | 169 | 5 | 13 | 298 | 8 | 323 | 2.40e-60 | 200 |
| Msa1321450 | AT5G15500.2 | 37.500 | 312 | 161 | 7 | 10 | 289 | 6 | 315 | 8.12e-56 | 189 |
| Msa1321450 | AT1G14500.1 | 34.505 | 313 | 174 | 4 | 10 | 291 | 5 | 317 | 4.60e-54 | 184 |
| Msa1321450 | AT5G54620.1 | 36.667 | 300 | 161 | 4 | 15 | 285 | 10 | 309 | 7.78e-53 | 181 |
| Msa1321450 | AT5G54610.1 | 34.740 | 308 | 166 | 7 | 5 | 282 | 2 | 304 | 1.03e-50 | 175 |
| Msa1321450 | AT1G14480.1 | 30.352 | 369 | 210 | 6 | 7 | 343 | 2 | 355 | 1.68e-49 | 172 |
| Msa1321450 | AT1G14480.2 | 28.338 | 367 | 177 | 9 | 7 | 343 | 2 | 312 | 4.78e-35 | 132 |
| Msa1321450 | AT5G51160.1 | 30.791 | 354 | 190 | 13 | 48 | 364 | 34 | 369 | 1.03e-32 | 127 |
| Msa1321450 | AT5G15500.1 | 36.019 | 211 | 116 | 6 | 96 | 289 | 1 | 209 | 6.32e-28 | 112 |
| Msa1321450 | AT2G01680.1 | 25.225 | 333 | 188 | 10 | 38 | 338 | 105 | 408 | 4.00e-15 | 77.0 |
| Msa1321450 | AT1G10340.1 | 26.217 | 267 | 148 | 7 | 65 | 291 | 175 | 432 | 3.08e-14 | 74.3 |
| Msa1321450 | AT1G10340.2 | 26.217 | 267 | 148 | 7 | 65 | 291 | 171 | 428 | 3.15e-14 | 74.3 |
| Msa1321450 | AT4G03500.1 | 26.333 | 300 | 160 | 11 | 6 | 288 | 247 | 502 | 2.60e-13 | 71.6 |
| Msa1321450 | AT4G03500.2 | 26.333 | 300 | 160 | 11 | 6 | 288 | 224 | 479 | 2.76e-13 | 71.6 |
| Msa1321450 | AT4G03500.3 | 26.333 | 300 | 160 | 11 | 6 | 288 | 224 | 479 | 2.76e-13 | 71.6 |
| Msa1321450 | AT3G12360.1 | 24.054 | 370 | 175 | 14 | 38 | 338 | 140 | 472 | 2.45e-12 | 68.6 |
| Msa1321450 | AT3G12360.2 | 24.054 | 370 | 175 | 14 | 38 | 338 | 128 | 460 | 2.49e-12 | 68.6 |
| Msa1321450 | AT1G34050.1 | 24.275 | 276 | 148 | 8 | 51 | 291 | 174 | 423 | 2.68e-12 | 68.6 |
| Msa1321450 | AT5G54700.2 | 25.843 | 267 | 135 | 10 | 84 | 338 | 20 | 235 | 5.51e-12 | 66.6 |
| Msa1321450 | AT3G09550.2 | 23.834 | 386 | 199 | 12 | 6 | 338 | 150 | 493 | 6.11e-12 | 67.4 |
| Msa1321450 | AT3G09550.1 | 23.834 | 386 | 199 | 12 | 6 | 338 | 143 | 486 | 7.00e-12 | 67.0 |
| Msa1321450 | AT3G09550.3 | 23.834 | 386 | 199 | 12 | 6 | 338 | 143 | 486 | 7.00e-12 | 67.0 |
| Msa1321450 | AT4G03490.4 | 27.111 | 225 | 143 | 7 | 72 | 288 | 256 | 467 | 5.87e-11 | 64.3 |
| Msa1321450 | AT4G03490.5 | 27.111 | 225 | 143 | 7 | 72 | 288 | 246 | 457 | 6.36e-11 | 64.3 |
| Msa1321450 | AT4G03490.3 | 25.000 | 296 | 189 | 10 | 13 | 288 | 185 | 467 | 8.39e-11 | 63.9 |
Find 75 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAGATGATCCATCCATTT+TGG | 0.164146 | 8_4:-27124985 | Msa1321450:CDS |
| CCTTTGCTATCTACTTTCTA+TGG | 0.241321 | 8_4:-27122043 | Msa1321450:CDS |
| TCATAATTTCAGTGGCAAAT+TGG | 0.275256 | 8_4:+27124896 | None:intergenic |
| CATATGCTTGGAAGCTAAAC+TGG | 0.300020 | 8_4:-27124861 | Msa1321450:CDS |
| CGATTCTATACGATCCAAAA+TGG | 0.303787 | 8_4:+27124971 | None:intergenic |
| TCCACCTTGCTTTGCAGAAC+GGG | 0.338963 | 8_4:-27124822 | Msa1321450:CDS |
| AAAGAACTTGTTAGAGTTCA+AGG | 0.356088 | 8_4:-27124763 | Msa1321450:CDS |
| TCAAACATGAACACAAATAA+TGG | 0.356091 | 8_4:-27125068 | None:intergenic |
| ATCTCTACCCTTGGAAATGC+TGG | 0.360071 | 8_4:-27122154 | Msa1321450:CDS |
| TTACCTGTGGATTACAACTT+AGG | 0.376888 | 8_4:+27124467 | None:intergenic |
| GAGGCCCTTCAAGTACTTGT+TGG | 0.387506 | 8_4:-27124589 | Msa1321450:CDS |
| ATTTAAAATTCTAAATCAAA+TGG | 0.401531 | 8_4:-27124524 | Msa1321450:CDS |
| GCAGAACGGGCAAAAGAGTA+TGG | 0.403806 | 8_4:-27124809 | Msa1321450:CDS |
| CCCTTCAAGTACTTGTTGGC+TGG | 0.409768 | 8_4:-27124585 | Msa1321450:CDS |
| AAATTTGAAGGCAGAGAACT+TGG | 0.417830 | 8_4:-27122500 | Msa1321450:CDS |
| GTCAGGTATTGAATGGATTC+CGG | 0.418131 | 8_4:+27124661 | None:intergenic |
| CCTTGGAAATGCTGGGAAAT+CGG | 0.420341 | 8_4:-27122146 | Msa1321450:CDS |
| TTCTGCAAAGCAAGGTGGAT+GGG | 0.420515 | 8_4:+27124826 | None:intergenic |
| AAGGGTAGAGATAGTGCAAT+TGG | 0.437793 | 8_4:+27122165 | None:intergenic |
| TGAAAACTGCAGCTCAAGCC+GGG | 0.438644 | 8_4:-27125034 | Msa1321450:CDS |
| TCCAGAGCTGGAGCAAAACT+TGG | 0.449399 | 8_4:-27122424 | Msa1321450:CDS |
| TGTTAAGAATGAACAGTTTG+AGG | 0.453646 | 8_4:-27124608 | Msa1321450:CDS |
| TACCTGTGGATTACAACTTA+GGG | 0.471039 | 8_4:+27124468 | None:intergenic |
| CAGTCTCGCACCTCACAGTC+AGG | 0.477088 | 8_4:+27124644 | None:intergenic |
| CTTGTTTGTTGGTAATGACT+AGG | 0.482124 | 8_4:-27122525 | Msa1321450:CDS |
| TGTTGAAACCTTCATATGCT+TGG | 0.485488 | 8_4:-27124873 | Msa1321450:CDS |
| TAACTTTCTCTATGCTTGTC+CGG | 0.488983 | 8_4:-27124680 | Msa1321450:CDS |
| TCTTAGTTTATGTGCGCGTG+TGG | 0.491750 | 8_4:+27122381 | None:intergenic |
| TTTAGCTTCCAAGCATATGA+AGG | 0.493105 | 8_4:+27124865 | None:intergenic |
| CCTCACAGTCAGGTATTGAA+TGG | 0.499244 | 8_4:+27124654 | None:intergenic |
| ATGAAAACTGCAGCTCAAGC+CGG | 0.501760 | 8_4:-27125035 | Msa1321450:CDS |
| GACCTGCATTGGAATGTGTA+GGG | 0.503490 | 8_4:+27122010 | None:intergenic |
| GGTGGAACAGGCTTGTTTGT+TGG | 0.504453 | 8_4:-27122536 | Msa1321450:intron |
| GCCAGCCAACAAGTACTTGA+AGG | 0.506296 | 8_4:+27124584 | None:intergenic |
| GTTAGAGTTCAAGGAAGAGA+AGG | 0.507020 | 8_4:-27124754 | Msa1321450:CDS |
| AATTGCACTATCTCTACCCT+TGG | 0.518706 | 8_4:-27122163 | Msa1321450:CDS |
| CCGATTTCCCAGCATTTCCA+AGG | 0.522692 | 8_4:+27122146 | None:intergenic |
| AGCCCTAAGTTGTAATCCAC+AGG | 0.527973 | 8_4:-27124470 | Msa1321450:intron |
| GTTCTGCAAAGCAAGGTGGA+TGG | 0.528821 | 8_4:+27124825 | None:intergenic |
| GGGAGTCAATGCTGATTGGT+AGG | 0.532972 | 8_4:+27122243 | None:intergenic |
| TCCCCTACACATTCCAATGC+AGG | 0.534504 | 8_4:-27122012 | Msa1321450:CDS |
| AAGAAAATATTATCCAGAGC+TGG | 0.537892 | 8_4:-27122436 | Msa1321450:CDS |
| ATCCACCTTGCTTTGCAGAA+CGG | 0.538687 | 8_4:-27124823 | Msa1321450:CDS |
| ATTTGACTTGCAAAATGAAG+AGG | 0.542519 | 8_4:+27124724 | None:intergenic |
| CTAAATCAAATGGATGAGGC+AGG | 0.549059 | 8_4:-27124514 | Msa1321450:CDS |
| TTTGCCCGTTCTGCAAAGCA+AGG | 0.551648 | 8_4:+27124818 | None:intergenic |
| CTTAGTTTATGTGCGCGTGT+GGG | 0.552171 | 8_4:+27122382 | None:intergenic |
| CAGAGGAGCGACGTAACACT+TGG | 0.552275 | 8_4:-27122297 | Msa1321450:CDS |
| TTTCAACATCATAATTTCAG+TGG | 0.552567 | 8_4:+27124888 | None:intergenic |
| GATGTTAACAAGACCTGCAT+TGG | 0.555463 | 8_4:+27121999 | None:intergenic |
| CTCTGATATATCTCTTCTAA+CGG | 0.557929 | 8_4:+27122315 | None:intergenic |
| TCTGCAAAGCAAGGTGGATG+GGG | 0.566411 | 8_4:+27124827 | None:intergenic |
| TCTATACGATCCAAAATGGA+TGG | 0.568541 | 8_4:+27124975 | None:intergenic |
| TCTCTACCCTTGGAAATGCT+GGG | 0.578282 | 8_4:-27122153 | Msa1321450:CDS |
| GGTAGAGATAGTGCAATTGG+AGG | 0.582565 | 8_4:+27122168 | None:intergenic |
| AATTCTAAATCAAATGGATG+AGG | 0.583293 | 8_4:-27124518 | Msa1321450:CDS |
| TTAACCTGATAAACTCCACC+AGG | 0.594570 | 8_4:+27122220 | None:intergenic |
| CGATTTCCCAGCATTTCCAA+GGG | 0.612442 | 8_4:+27122147 | None:intergenic |
| GCTTGGAAGCTAAACTGGCA+AGG | 0.616049 | 8_4:-27124856 | Msa1321450:CDS |
| CCAGCCAACAAGTACTTGAA+GGG | 0.622327 | 8_4:+27124585 | None:intergenic |
| ATAGAGAAGATCTATATCCC+CGG | 0.622925 | 8_4:+27125016 | None:intergenic |
| AGACCTGCATTGGAATGTGT+AGG | 0.625485 | 8_4:+27122009 | None:intergenic |
| GAAAACTGCAGCTCAAGCCG+GGG | 0.641726 | 8_4:-27125033 | Msa1321450:CDS |
| CTCGAAGCAAATTACAAGAG+AGG | 0.641881 | 8_4:-27124562 | Msa1321450:CDS |
| CCATAGAAAGTAGATAGCAA+AGG | 0.642459 | 8_4:+27122043 | None:intergenic |
| GCCCGTTCTGCAAAGCAAGG+TGG | 0.649880 | 8_4:+27124821 | None:intergenic |
| CGTTAGAAGAGATATATCAG+AGG | 0.654604 | 8_4:-27122314 | Msa1321450:CDS |
| CCATTCAATACCTGACTGTG+AGG | 0.663432 | 8_4:-27124654 | Msa1321450:CDS |
| AGTCAATGCTGATTGGTAGG+TGG | 0.665720 | 8_4:+27122246 | None:intergenic |
| AGACATTGCATCTACTGCAG+AGG | 0.675102 | 8_4:-27122461 | Msa1321450:CDS |
| AGTAGATGCAATGTCTAATG+CGG | 0.697441 | 8_4:+27122468 | None:intergenic |
| TAACCTGATAAACTCCACCA+GGG | 0.698278 | 8_4:+27122221 | None:intergenic |
| ACCTGCATTGGAATGTGTAG+GGG | 0.698896 | 8_4:+27122011 | None:intergenic |
| AACCTGATAAACTCCACCAG+GGG | 0.703709 | 8_4:+27122222 | None:intergenic |
| ACCTGATAAACTCCACCAGG+GGG | 0.711735 | 8_4:+27122223 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATTCTAAATCAAA+TGG | - | chr8_4:27122541-27122560 | Msa1321450:intron | 10.0% |
| !!! | AATTTTTATGCATATAATTT+AGG | + | chr8_4:27123641-27123660 | None:intergenic | 10.0% |
| !! | AATTAAAACATAATAATTTG+GGG | + | chr8_4:27123848-27123867 | None:intergenic | 10.0% |
| !! | ATTTATAATTAATTATTTGG+TGG | - | chr8_4:27124511-27124530 | Msa1321450:CDS | 10.0% |
| !! | ACAAGATAAATATATAAACA+TGG | + | chr8_4:27122653-27122672 | None:intergenic | 15.0% |
| !!! | ATATGTTGTTTTTTAATTGA+GGG | + | chr8_4:27122680-27122699 | None:intergenic | 15.0% |
| !!! | CATATTTCTTGTTATTTTTT+TGG | - | chr8_4:27122734-27122753 | Msa1321450:intron | 15.0% |
| !! | TGATAAGAAAAATATAAAGT+AGG | - | chr8_4:27122786-27122805 | Msa1321450:intron | 15.0% |
| !! | AGATTCAATATAAAAAAATC+AGG | + | chr8_4:27123205-27123224 | None:intergenic | 15.0% |
| !! | TAAGAAGGAAAAAATAAAAA+AGG | + | chr8_4:27123320-27123339 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTTTCCTTCTTA+AGG | - | chr8_4:27123320-27123339 | Msa1321450:intron | 15.0% |
| !! | TAAATATATAAACATGGCAT+GGG | + | chr8_4:27122647-27122666 | None:intergenic | 20.0% |
| !! | ATAAATATATAAACATGGCA+TGG | + | chr8_4:27122648-27122667 | None:intergenic | 20.0% |
| !!! | TATGTTGTTTTTTAATTGAG+GGG | + | chr8_4:27122679-27122698 | None:intergenic | 20.0% |
| !!! | GATATGTTGTTTTTTAATTG+AGG | + | chr8_4:27122681-27122700 | None:intergenic | 20.0% |
| !!! | ATTTCTTGTTATTTTTTTGG+TGG | - | chr8_4:27122737-27122756 | Msa1321450:intron | 20.0% |
| !! | AAAATATAAAGTAGGTAGTT+TGG | - | chr8_4:27122794-27122813 | Msa1321450:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | + | chr8_4:27124304-27124323 | None:intergenic | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | + | chr8_4:27124303-27124322 | None:intergenic | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | - | chr8_4:27122959-27122978 | Msa1321450:intron | 20.0% |
| !! | TTCAATATAAAAAAATCAGG+AGG | + | chr8_4:27123202-27123221 | None:intergenic | 20.0% |
| !!! | ATAAAAAAGGAAGTATCAAA+GGG | + | chr8_4:27123307-27123326 | None:intergenic | 20.0% |
| !!! | AATAAAAAAGGAAGTATCAA+AGG | + | chr8_4:27123308-27123327 | None:intergenic | 20.0% |
| !!! | TTTCTTATATTTTATGACGT+AGG | - | chr8_4:27123899-27123918 | Msa1321450:intron | 20.0% |
| !!! | TTCTTATATTTTATGACGTA+GGG | - | chr8_4:27123900-27123919 | Msa1321450:intron | 20.0% |
| !! | AAAATAACTATATAGACCTT+TGG | - | chr8_4:27124152-27124171 | Msa1321450:intron | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | - | chr8_4:27124303-27124322 | Msa1321450:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | - | chr8_4:27124304-27124323 | Msa1321450:intron | 20.0% |
| !! | TTCAATGTAACATTAATTGT+TGG | + | chr8_4:27124379-27124398 | None:intergenic | 20.0% |
| !! | AAAAACATTCCAAAATAAGT+GGG | + | chr8_4:27124412-27124431 | None:intergenic | 20.0% |
| ! | TTTCAACATCATAATTTCAG+TGG | + | chr8_4:27122180-27122199 | None:intergenic | 25.0% |
| ! | AATTCTAAATCAAATGGATG+AGG | - | chr8_4:27122547-27122566 | Msa1321450:intron | 25.0% |
| !! | TTTTACTCGCAAATTTCATA+TGG | - | chr8_4:27122841-27122860 | Msa1321450:intron | 25.0% |
| !! | AATGTACTAGATCTTCATTT+TGG | + | chr8_4:27122879-27122898 | None:intergenic | 25.0% |
| ! | ACAAATAACTAAAGGGTTAA+CGG | + | chr8_4:27122919-27122938 | None:intergenic | 25.0% |
| ! | TTAACCCTTTAGTTATTTGT+TGG | - | chr8_4:27122919-27122938 | Msa1321450:intron | 25.0% |
| ! | GTAACCAACAAATAACTAAA+GGG | + | chr8_4:27122926-27122945 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTAA+AGG | + | chr8_4:27122927-27122946 | None:intergenic | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | - | chr8_4:27122930-27122949 | Msa1321450:intron | 25.0% |
| ! | GCTAACAAATACTAACTTAA+GGG | + | chr8_4:27122986-27123005 | None:intergenic | 25.0% |
| !! | CTTTTGTCAAAACGTTAAAT+AGG | - | chr8_4:27123028-27123047 | Msa1321450:intron | 25.0% |
| !!! | TGTAAATTTTGAAAATCCAG+GGG | + | chr8_4:27123149-27123168 | None:intergenic | 25.0% |
| !!! | GTGTAAATTTTGAAAATCCA+GGG | + | chr8_4:27123150-27123169 | None:intergenic | 25.0% |
| ! | CTAGATGCAATATAAAAATC+AGG | + | chr8_4:27123228-27123247 | None:intergenic | 25.0% |
| ! | TTCATGTTGAAGTAAAATTG+AGG | - | chr8_4:27123474-27123493 | Msa1321450:intron | 25.0% |
| !! | ATATAATTTAGGATTCAAGC+AGG | + | chr8_4:27123630-27123649 | None:intergenic | 25.0% |
| ! | GTAAACAACATGACTAAATA+GGG | + | chr8_4:27123708-27123727 | None:intergenic | 25.0% |
| ! | TGTAAACAACATGACTAAAT+AGG | + | chr8_4:27123709-27123728 | None:intergenic | 25.0% |
| !! | TTATTGGTTATGGAGAAAAT+AGG | + | chr8_4:27123811-27123830 | None:intergenic | 25.0% |
| !! | CATAATAATTTGGGGTATAT+TGG | + | chr8_4:27123840-27123859 | None:intergenic | 25.0% |
| ! | GATTATAGTTATAGTCTCTT+AGG | + | chr8_4:27123969-27123988 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr8_4:27124334-27124353 | Msa1321450:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr8_4:27124335-27124354 | Msa1321450:intron | 25.0% |
| ! | AAAACATTCCAAAATAAGTG+GGG | + | chr8_4:27124411-27124430 | None:intergenic | 25.0% |
| ! | GAAAAACATTCCAAAATAAG+TGG | + | chr8_4:27124413-27124432 | None:intergenic | 25.0% |
| !! | AATTAATTATTTGGTGGAAC+AGG | - | chr8_4:27124517-27124536 | Msa1321450:CDS | 25.0% |
| ! | AATGACTAGGAAAAATTTGA+AGG | - | chr8_4:27124553-27124572 | Msa1321450:CDS | 25.0% |
| !!! | TTCGTTTTTTGTATCAACTA+TGG | - | chr8_4:27124988-27125007 | Msa1321450:CDS | 25.0% |
| TGTTAAGGAGTTTCAACAAA+TGG | + | chr8_4:27122123-27122142 | None:intergenic | 30.0% | |
| AGATGCTGCAAAATATGTTA+AGG | + | chr8_4:27122138-27122157 | None:intergenic | 30.0% | |
| ! | AACATATTTTGCAGCATCTA+TGG | - | chr8_4:27122139-27122158 | Msa1321450:CDS | 30.0% |
| ! | ACATATTTTGCAGCATCTAT+GGG | - | chr8_4:27122140-27122159 | Msa1321450:CDS | 30.0% |
| TCATAATTTCAGTGGCAAAT+TGG | + | chr8_4:27122172-27122191 | None:intergenic | 30.0% | |
| !! | AAAGAACTTGTTAGAGTTCA+AGG | - | chr8_4:27122302-27122321 | Msa1321450:CDS | 30.0% |
| !! | ATTTGACTTGCAAAATGAAG+AGG | + | chr8_4:27122344-27122363 | None:intergenic | 30.0% |
| ! | CTTCATTTTGCAAGTCAAAT+TGG | - | chr8_4:27122344-27122363 | Msa1321450:CDS | 30.0% |
| TGTTAAGAATGAACAGTTTG+AGG | - | chr8_4:27122457-27122476 | Msa1321450:CDS | 30.0% | |
| !!! | GTGGTGTAATTTTTTTTCGT+TGG | - | chr8_4:27122756-27122775 | Msa1321450:intron | 30.0% |
| GGCTAACAAATACTAACTTA+AGG | + | chr8_4:27122987-27123006 | None:intergenic | 30.0% | |
| !! | CGTGTAAATTTTGAAAATCC+AGG | + | chr8_4:27123151-27123170 | None:intergenic | 30.0% |
| CAAAGGGAAGTAATTAAACT+GGG | + | chr8_4:27123291-27123310 | None:intergenic | 30.0% | |
| TCAAAGGGAAGTAATTAAAC+TGG | + | chr8_4:27123292-27123311 | None:intergenic | 30.0% | |
| ! | AAGTAAAATTGAGGCACTTT+AGG | - | chr8_4:27123483-27123502 | Msa1321450:intron | 30.0% |
| ! | AGTAAAATTGAGGCACTTTA+GGG | - | chr8_4:27123484-27123503 | Msa1321450:intron | 30.0% |
| !!! | ACCATGTATGTTCTTGTTTT+AGG | - | chr8_4:27123553-27123572 | Msa1321450:intron | 30.0% |
| TCCTAAAACAAGAACATACA+TGG | + | chr8_4:27123557-27123576 | None:intergenic | 30.0% | |
| ! | TTGGTTATGGTTATTGGTTA+TGG | + | chr8_4:27123821-27123840 | None:intergenic | 30.0% |
| ! | GGTATATTGGTTATGGTTAT+TGG | + | chr8_4:27123827-27123846 | None:intergenic | 30.0% |
| ! | AATTTGGGGTATATTGGTTA+TGG | + | chr8_4:27123834-27123853 | None:intergenic | 30.0% |
| AACTTCATTAGAGATACCAA+AGG | + | chr8_4:27124171-27124190 | None:intergenic | 30.0% | |
| TTGACGGAAGATATCTTAAA+GGG | - | chr8_4:27124275-27124294 | Msa1321450:intron | 30.0% | |
| !! | TGTTGGCTTAATTAATGATG+TGG | + | chr8_4:27124362-27124381 | None:intergenic | 30.0% |
| ! | ATATAAAGCCCCACTTATTT+TGG | - | chr8_4:27124400-27124419 | Msa1321450:intron | 30.0% |
| AAGAAAATATTATCCAGAGC+TGG | - | chr8_4:27124629-27124648 | Msa1321450:CDS | 30.0% | |
| CTCTGATATATCTCTTCTAA+CGG | + | chr8_4:27124753-27124772 | None:intergenic | 30.0% | |
| ATAGAGAAGATCTATATCCC+CGG | + | chr8_4:27122052-27122071 | None:intergenic | 35.0% | |
| TCTATACGATCCAAAATGGA+TGG | + | chr8_4:27122093-27122112 | None:intergenic | 35.0% | |
| CGATTCTATACGATCCAAAA+TGG | + | chr8_4:27122097-27122116 | None:intergenic | 35.0% | |
| TGTTGAAACCTTCATATGCT+TGG | - | chr8_4:27122192-27122211 | Msa1321450:CDS | 35.0% | |
| ! | TTTAGCTTCCAAGCATATGA+AGG | + | chr8_4:27122203-27122222 | None:intergenic | 35.0% |
| ! | TTTTGCAAGTCAAATTGGTG+AGG | - | chr8_4:27122349-27122368 | Msa1321450:CDS | 35.0% |
| TAACTTTCTCTATGCTTGTC+CGG | - | chr8_4:27122385-27122404 | Msa1321450:CDS | 35.0% | |
| ! | TACCTGTGGATTACAACTTA+GGG | + | chr8_4:27122600-27122619 | None:intergenic | 35.0% |
| ! | TTACCTGTGGATTACAACTT+AGG | + | chr8_4:27122601-27122620 | None:intergenic | 35.0% |
| ACTAAAGGGTTAACGGTTAA+GGG | + | chr8_4:27122912-27122931 | None:intergenic | 35.0% | |
| AACTAAAGGGTTAACGGTTA+AGG | + | chr8_4:27122913-27122932 | None:intergenic | 35.0% | |
| TACAGCTCATATGAATGACA+CGG | - | chr8_4:27123265-27123284 | Msa1321450:intron | 35.0% | |
| ! | ATGCTTCTCAAATGACTTGT+AGG | + | chr8_4:27123523-27123542 | None:intergenic | 35.0% |
| CAAGAACATACATGGTTTAG+TGG | + | chr8_4:27123549-27123568 | None:intergenic | 35.0% | |
| TGGTTATGGAGAAAATAGGA+GGG | + | chr8_4:27123807-27123826 | None:intergenic | 35.0% | |
| TTGGTTATGGAGAAAATAGG+AGG | + | chr8_4:27123808-27123827 | None:intergenic | 35.0% | |
| TATAGTCTCTTAGGTGAAAC+AGG | + | chr8_4:27123960-27123979 | None:intergenic | 35.0% | |
| GTTGACGGAAGATATCTTAA+AGG | - | chr8_4:27124274-27124293 | Msa1321450:intron | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr8_4:27124342-27124361 | None:intergenic | 35.0% | |
| TTACAAATGTGACACTGAGA+TGG | - | chr8_4:27124435-27124454 | Msa1321450:intron | 35.0% | |
| !! | CTTGTTTGTTGGTAATGACT+AGG | - | chr8_4:27124540-27124559 | Msa1321450:CDS | 35.0% |
| AAATTTGAAGGCAGAGAACT+TGG | - | chr8_4:27124565-27124584 | Msa1321450:CDS | 35.0% | |
| AGTAGATGCAATGTCTAATG+CGG | + | chr8_4:27124600-27124619 | None:intergenic | 35.0% | |
| CGTTAGAAGAGATATATCAG+AGG | - | chr8_4:27124751-27124770 | Msa1321450:CDS | 35.0% | |
| CCATAGAAAGTAGATAGCAA+AGG | + | chr8_4:27125025-27125044 | None:intergenic | 35.0% | |
| ! | CCTTTGCTATCTACTTTCTA+TGG | - | chr8_4:27125022-27125041 | Msa1321450:CDS | 35.0% |
| ! | TCGAGATGATCCATCCATTT+TGG | - | chr8_4:27122080-27122099 | Msa1321450:CDS | 40.0% |
| CATATGCTTGGAAGCTAAAC+TGG | - | chr8_4:27122204-27122223 | Msa1321450:CDS | 40.0% | |
| ! | AGTATGGTGTCTCGTTTTGT+GGG | - | chr8_4:27122272-27122291 | Msa1321450:CDS | 40.0% |
| GTTAGAGTTCAAGGAAGAGA+AGG | - | chr8_4:27122311-27122330 | Msa1321450:CDS | 40.0% | |
| !! | GTCAGGTATTGAATGGATTC+CGG | + | chr8_4:27122407-27122426 | None:intergenic | 40.0% |
| CTCGAAGCAAATTACAAGAG+AGG | - | chr8_4:27122503-27122522 | Msa1321450:CDS | 40.0% | |
| CTAAATCAAATGGATGAGGC+AGG | - | chr8_4:27122551-27122570 | Msa1321450:intron | 40.0% | |
| TTGCAGGAGTTAATTACCTG+TGG | + | chr8_4:27122614-27122633 | None:intergenic | 40.0% | |
| CATGGGTTTCATATCATTGC+AGG | + | chr8_4:27122630-27122649 | None:intergenic | 40.0% | |
| GCCAAATAAATCCTCATCGT+CGG | - | chr8_4:27123004-27123023 | Msa1321450:intron | 40.0% | |
| ACCGACGATGAGGATTTATT+TGG | + | chr8_4:27123008-27123027 | None:intergenic | 40.0% | |
| TGTGTATCCACCTTAGACAT+TGG | - | chr8_4:27123082-27123101 | Msa1321450:intron | 40.0% | |
| ! | GTGTCATTCATATGAGCTGT+AGG | + | chr8_4:27123266-27123285 | None:intergenic | 40.0% |
| AGCAAGTAAGTGCCTTAAGA+AGG | + | chr8_4:27123335-27123354 | None:intergenic | 40.0% | |
| !! | CATTGGGTTAACGGTTTTGA+CGG | - | chr8_4:27124237-27124256 | Msa1321450:intron | 40.0% |
| TTTGACGGTGGGGATTTATT+TGG | - | chr8_4:27124252-27124271 | Msa1321450:intron | 40.0% | |
| GTGGGGATTTATTTGGTTGA+CGG | - | chr8_4:27124259-27124278 | Msa1321450:intron | 40.0% | |
| TAACCTGATAAACTCCACCA+GGG | + | chr8_4:27124847-27124866 | None:intergenic | 40.0% | |
| TTAACCTGATAAACTCCACC+AGG | + | chr8_4:27124848-27124867 | None:intergenic | 40.0% | |
| AAGGGTAGAGATAGTGCAAT+TGG | + | chr8_4:27124903-27124922 | None:intergenic | 40.0% | |
| AATTGCACTATCTCTACCCT+TGG | - | chr8_4:27124902-27124921 | Msa1321450:CDS | 40.0% | |
| ATGAAAACTGCAGCTCAAGC+CGG | - | chr8_4:27122030-27122049 | Msa1321450:CDS | 45.0% | |
| TTCTGCAAAGCAAGGTGGAT+GGG | + | chr8_4:27122242-27122261 | None:intergenic | 45.0% | |
| ATCCACCTTGCTTTGCAGAA+CGG | - | chr8_4:27122242-27122261 | Msa1321450:CDS | 45.0% | |
| ! | GAGTATGGTGTCTCGTTTTG+TGG | - | chr8_4:27122271-27122290 | Msa1321450:CDS | 45.0% |
| !! | CCTCACAGTCAGGTATTGAA+TGG | + | chr8_4:27122414-27122433 | None:intergenic | 45.0% |
| CCATTCAATACCTGACTGTG+AGG | - | chr8_4:27122411-27122430 | Msa1321450:CDS | 45.0% | |
| CCAGCCAACAAGTACTTGAA+GGG | + | chr8_4:27122483-27122502 | None:intergenic | 45.0% | |
| AGCCCTAAGTTGTAATCCAC+AGG | - | chr8_4:27122595-27122614 | Msa1321450:intron | 45.0% | |
| TTGACAAAAGACCGACGATG+AGG | + | chr8_4:27123018-27123037 | None:intergenic | 45.0% | |
| TAGCCAGGATCTTTCATCAG+GGG | + | chr8_4:27124207-27124226 | None:intergenic | 45.0% | |
| GTAGCCAGGATCTTTCATCA+GGG | + | chr8_4:27124208-27124227 | None:intergenic | 45.0% | |
| AGACATTGCATCTACTGCAG+AGG | - | chr8_4:27124604-27124623 | Msa1321450:CDS | 45.0% | |
| CTTAGTTTATGTGCGCGTGT+GGG | + | chr8_4:27124686-27124705 | None:intergenic | 45.0% | |
| TCTTAGTTTATGTGCGCGTG+TGG | + | chr8_4:27124687-27124706 | None:intergenic | 45.0% | |
| ! | AGTCAATGCTGATTGGTAGG+TGG | + | chr8_4:27124822-27124841 | None:intergenic | 45.0% |
| AACCTGATAAACTCCACCAG+GGG | + | chr8_4:27124846-27124865 | None:intergenic | 45.0% | |
| GGTAGAGATAGTGCAATTGG+AGG | + | chr8_4:27124900-27124919 | None:intergenic | 45.0% | |
| ATCTCTACCCTTGGAAATGC+TGG | - | chr8_4:27124911-27124930 | Msa1321450:CDS | 45.0% | |
| TCTCTACCCTTGGAAATGCT+GGG | - | chr8_4:27124912-27124931 | Msa1321450:CDS | 45.0% | |
| CGATTTCCCAGCATTTCCAA+GGG | + | chr8_4:27124921-27124940 | None:intergenic | 45.0% | |
| CCTTGGAAATGCTGGGAAAT+CGG | - | chr8_4:27124919-27124938 | Msa1321450:intron | 45.0% | |
| ACCTGCATTGGAATGTGTAG+GGG | + | chr8_4:27125057-27125076 | None:intergenic | 45.0% | |
| GACCTGCATTGGAATGTGTA+GGG | + | chr8_4:27125058-27125077 | None:intergenic | 45.0% | |
| AGACCTGCATTGGAATGTGT+AGG | + | chr8_4:27125059-27125078 | None:intergenic | 45.0% | |
| !!! | CTTTTATATATTTTTTTTAA+AGG | - | chr8_4:27123381-27123400 | Msa1321450:intron | 5.0% |
| !!! | CTTTTATATATTTTTTTTAA+AGG | - | chr8_4:27123381-27123400 | Msa1321450:intron | 5.0% |
| !! | AAATTAAAACATAATAATTT+GGG | + | chr8_4:27123849-27123868 | None:intergenic | 5.0% |
| !! | AAAATTAAAACATAATAATT+TGG | + | chr8_4:27123850-27123869 | None:intergenic | 5.0% |
| !! | TTCATTTATAATTAATTATT+TGG | - | chr8_4:27124508-27124527 | Msa1321450:CDS | 5.0% |
| TGAAAACTGCAGCTCAAGCC+GGG | - | chr8_4:27122031-27122050 | Msa1321450:CDS | 50.0% | |
| GCTTGGAAGCTAAACTGGCA+AGG | - | chr8_4:27122209-27122228 | Msa1321450:CDS | 50.0% | |
| TCTGCAAAGCAAGGTGGATG+GGG | + | chr8_4:27122241-27122260 | None:intergenic | 50.0% | |
| GTTCTGCAAAGCAAGGTGGA+TGG | + | chr8_4:27122243-27122262 | None:intergenic | 50.0% | |
| TCCACCTTGCTTTGCAGAAC+GGG | - | chr8_4:27122243-27122262 | Msa1321450:CDS | 50.0% | |
| TTTGCCCGTTCTGCAAAGCA+AGG | + | chr8_4:27122250-27122269 | None:intergenic | 50.0% | |
| GCAGAACGGGCAAAAGAGTA+TGG | - | chr8_4:27122256-27122275 | Msa1321450:CDS | 50.0% | |
| GAGGCCCTTCAAGTACTTGT+TGG | - | chr8_4:27122476-27122495 | Msa1321450:CDS | 50.0% | |
| ! | CCCTTCAAGTACTTGTTGGC+TGG | - | chr8_4:27122480-27122499 | Msa1321450:CDS | 50.0% |
| GCCAGCCAACAAGTACTTGA+AGG | + | chr8_4:27122484-27122503 | None:intergenic | 50.0% | |
| TCCACCTTAGACATTGGCAG+TGG | - | chr8_4:27123088-27123107 | Msa1321450:intron | 50.0% | |
| ACCTTAGACATTGGCAGTGG+CGG | - | chr8_4:27123091-27123110 | Msa1321450:intron | 50.0% | |
| TGCATCCCCTCACTTGTATG+TGG | + | chr8_4:27123119-27123138 | None:intergenic | 50.0% | |
| AACCCCCTGATGAAAGATCC+TGG | - | chr8_4:27124201-27124220 | Msa1321450:intron | 50.0% | |
| AGCCAGGATCTTTCATCAGG+GGG | + | chr8_4:27124206-27124225 | None:intergenic | 50.0% | |
| CGTAGCCAGGATCTTTCATC+AGG | + | chr8_4:27124209-27124228 | None:intergenic | 50.0% | |
| GCCACTGGACATTGGGTTAA+CGG | - | chr8_4:27124228-27124247 | Msa1321450:intron | 50.0% | |
| ACCGTTAACCCAATGTCCAG+TGG | + | chr8_4:27124232-27124251 | None:intergenic | 50.0% | |
| !! | TGGGTTAACGGTTTTGACGG+TGG | - | chr8_4:27124240-27124259 | Msa1321450:intron | 50.0% |
| !! | GGGTTAACGGTTTTGACGGT+GGG | - | chr8_4:27124241-27124260 | Msa1321450:intron | 50.0% |
| !! | GGTTAACGGTTTTGACGGTG+GGG | - | chr8_4:27124242-27124261 | Msa1321450:intron | 50.0% |
| ! | GGTGGAACAGGCTTGTTTGT+TGG | - | chr8_4:27124529-27124548 | Msa1321450:CDS | 50.0% |
| TCCAGAGCTGGAGCAAAACT+TGG | - | chr8_4:27124641-27124660 | Msa1321450:CDS | 50.0% | |
| ! | GGGAGTCAATGCTGATTGGT+AGG | + | chr8_4:27124825-27124844 | None:intergenic | 50.0% |
| ACCTGATAAACTCCACCAGG+GGG | + | chr8_4:27124845-27124864 | None:intergenic | 50.0% | |
| CCGATTTCCCAGCATTTCCA+AGG | + | chr8_4:27124922-27124941 | None:intergenic | 50.0% | |
| TCCCCTACACATTCCAATGC+AGG | - | chr8_4:27125053-27125072 | Msa1321450:CDS | 50.0% | |
| GAAAACTGCAGCTCAAGCCG+GGG | - | chr8_4:27122032-27122051 | Msa1321450:CDS | 55.0% | |
| GCCACTGCCAATGTCTAAGG+TGG | + | chr8_4:27123092-27123111 | None:intergenic | 55.0% | |
| ACCGCCACTGCCAATGTCTA+AGG | + | chr8_4:27123095-27123114 | None:intergenic | 55.0% | |
| !! | GCGGTGCCACATACAAGTGA+GGG | - | chr8_4:27123110-27123129 | Msa1321450:intron | 55.0% |
| !! | CGGTGCCACATACAAGTGAG+GGG | - | chr8_4:27123111-27123130 | Msa1321450:intron | 55.0% |
| AAAGATCCTGGCTACGCCAC+TGG | - | chr8_4:27124213-27124232 | Msa1321450:intron | 55.0% | |
| TGGCTACGCCACTGGACATT+GGG | - | chr8_4:27124221-27124240 | Msa1321450:intron | 55.0% | |
| ! | GCCAAGTTTTGCTCCAGCTC+TGG | + | chr8_4:27124645-27124664 | None:intergenic | 55.0% |
| CAGAGGAGCGACGTAACACT+TGG | - | chr8_4:27124768-27124787 | Msa1321450:CDS | 55.0% | |
| CAGGGGGAGTCAATGCTGAT+TGG | + | chr8_4:27124829-27124848 | None:intergenic | 55.0% | |
| !! | CAATCAGCATTGACTCCCCC+TGG | - | chr8_4:27124827-27124846 | Msa1321450:CDS | 55.0% |
| TCCCCCTGGTGGAGTTTATC+AGG | - | chr8_4:27124841-27124860 | Msa1321450:CDS | 55.0% | |
| GCCCGTTCTGCAAAGCAAGG+TGG | + | chr8_4:27122247-27122266 | None:intergenic | 60.0% | |
| CAGTCTCGCACCTCACAGTC+AGG | + | chr8_4:27122424-27122443 | None:intergenic | 60.0% | |
| !! | GGCGGTGCCACATACAAGTG+AGG | - | chr8_4:27123109-27123128 | Msa1321450:intron | 60.0% |
| CAATGTCCAGTGGCGTAGCC+AGG | + | chr8_4:27124222-27124241 | None:intergenic | 60.0% | |
| CTGGCTACGCCACTGGACAT+TGG | - | chr8_4:27124220-27124239 | Msa1321450:intron | 60.0% | |
| !! | TCAGCATTGACTCCCCCTGG+TGG | - | chr8_4:27124830-27124849 | Msa1321450:CDS | 60.0% |
| GGGGATGCAGATGCATCCCC+TGG | - | chr8_4:27123130-27123149 | Msa1321450:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 27122003 | 27125084 | 27122003 | ID=Msa1321450;Name=Msa1321450 |
| chr8_4 | mRNA | 27122003 | 27125084 | 27122003 | ID=Msa1321450-mRNA-1;Parent=Msa1321450;Name=Msa1321450-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|4|0|364 |
| chr8_4 | exon | 27124982 | 27125084 | 27124982 | ID=Msa1321450-mRNA-1:exon:9204;Parent=Msa1321450-mRNA-1 |
| chr8_4 | exon | 27124722 | 27124934 | 27124722 | ID=Msa1321450-mRNA-1:exon:9203;Parent=Msa1321450-mRNA-1 |
| chr8_4 | exon | 27124471 | 27124703 | 27124471 | ID=Msa1321450-mRNA-1:exon:9202;Parent=Msa1321450-mRNA-1 |
| chr8_4 | exon | 27122003 | 27122548 | 27122003 | ID=Msa1321450-mRNA-1:exon:9201;Parent=Msa1321450-mRNA-1 |
| chr8_4 | CDS | 27124982 | 27125084 | 27124982 | ID=Msa1321450-mRNA-1:cds;Parent=Msa1321450-mRNA-1 |
| chr8_4 | CDS | 27124722 | 27124934 | 27124722 | ID=Msa1321450-mRNA-1:cds;Parent=Msa1321450-mRNA-1 |
| chr8_4 | CDS | 27124471 | 27124703 | 27124471 | ID=Msa1321450-mRNA-1:cds;Parent=Msa1321450-mRNA-1 |
| chr8_4 | CDS | 27122003 | 27122548 | 27122003 | ID=Msa1321450-mRNA-1:cds;Parent=Msa1321450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
