AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0933580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0933580 MtrunA17_Chr6g0449731 94.022 184 11 0 170 353 36 219 3.85e-121 348
Msa0933580 MtrunA17_Chr6g0449731 90.576 191 12 2 1 185 1 191 6.08e-118 340
Msa0933580 MtrunA17_Chr6g0449771 93.011 186 13 0 169 354 35 220 4.20e-121 348
Msa0933580 MtrunA17_Chr6g0449771 90.052 191 13 2 1 185 1 191 3.38e-117 338
Msa0933580 MtrunA17_Chr6g0449751 95.028 181 9 0 174 354 40 220 3.21e-120 346
Msa0933580 MtrunA17_Chr6g0449751 87.435 191 18 2 1 185 1 191 3.26e-113 328
Msa0933580 MtrunA17_Chr6g0449761 93.370 181 12 0 170 350 36 216 1.03e-117 340
Msa0933580 MtrunA17_Chr6g0449761 89.005 191 15 2 1 185 1 191 5.84e-116 336
Msa0933580 MtrunA17_Chr1g0189841 70.909 220 56 3 143 354 3 222 7.51e-102 299
Msa0933580 MtrunA17_Chr1g0189841 82.081 173 25 4 7 173 6 178 2.49e-91 272
Msa0933580 MtrunA17_Chr2g0285871 77.838 185 40 1 171 354 37 221 9.34e-98 289
Msa0933580 MtrunA17_Chr2g0285871 75.862 174 37 3 5 173 4 177 6.26e-86 259
Msa0933580 MtrunA17_Chr4g0007041 77.297 185 41 1 171 354 37 221 1.46e-97 288
Msa0933580 MtrunA17_Chr4g0007041 74.576 177 41 2 1 173 1 177 4.42e-86 259
Msa0933580 MtrunA17_Chr4g0007051 76.757 185 42 1 171 354 37 221 3.27e-97 287
Msa0933580 MtrunA17_Chr4g0007051 73.404 188 42 4 5 184 4 191 2.58e-87 262
Msa0933580 MtrunA17_Chr4g0007031 76.757 185 42 1 171 354 37 221 3.38e-97 287
Msa0933580 MtrunA17_Chr4g0007031 73.404 188 42 4 5 184 4 191 2.79e-87 262
Msa0933580 MtrunA17_Chr5g0419971 76.757 185 42 1 171 354 37 221 3.38e-97 287
Msa0933580 MtrunA17_Chr5g0419971 73.404 188 42 4 5 184 4 191 2.79e-87 262
Msa0933580 MtrunA17_Chr5g0419981 76.757 185 42 1 171 354 37 221 3.38e-97 287
Msa0933580 MtrunA17_Chr5g0419981 73.404 188 42 4 5 184 4 191 2.79e-87 262
Msa0933580 MtrunA17_Chr6g0449781 75.138 181 44 1 174 354 40 219 4.43e-88 264
Msa0933580 MtrunA17_Chr6g0449781 72.571 175 45 1 1 172 1 175 4.12e-83 251
Msa0933580 MtrunA17_Chr6g0449791 71.751 177 46 2 1 173 1 177 2.51e-83 251
Msa0933580 MtrunA17_Chr6g0449791 64.737 190 66 1 153 341 19 208 3.73e-78 238
Msa0933580 MtrunA17_Chr1g0156131 67.251 171 54 1 181 349 39 209 8.13e-77 235
Msa0933580 MtrunA17_Chr1g0156131 62.500 160 47 3 19 173 19 170 1.26e-58 188
Msa0933580 MtrunA17_Chr2g0292831 60.938 192 73 1 160 349 21 212 1.09e-76 235
Msa0933580 MtrunA17_Chr2g0292831 62.500 160 50 3 19 173 19 173 4.72e-58 187
Msa0933580 MtrunA17_Chr2g0292901 63.889 180 63 1 172 349 34 213 1.56e-75 232
Msa0933580 MtrunA17_Chr2g0292901 61.491 161 51 4 19 173 19 174 2.94e-55 180
Msa0933580 MtrunA17_Chr2g0292861 64.535 172 58 2 181 349 7 178 1.31e-72 223
Msa0933580 MtrunA17_Chr2g0292861 64.662 133 41 3 47 173 7 139 6.37e-50 165
Msa0933580 MtrunA17_Chr2g0292841 64.535 172 58 2 181 349 7 178 3.43e-71 219
Msa0933580 MtrunA17_Chr2g0292841 65.414 133 40 3 47 173 7 139 2.26e-49 163
Msa0933580 MtrunA17_Chr1g0193671 48.588 177 87 2 174 348 39 213 6.58e-51 169
Msa0933580 MtrunA17_Chr1g0193671 47.674 172 77 5 11 173 8 175 6.17e-41 143
Msa0933580 MtrunA17_Chr2g0292911 67.797 118 36 1 181 296 7 124 2.74e-50 164
Msa0933580 MtrunA17_Chr2g0292911 66.949 118 34 2 47 159 7 124 3.85e-46 154
Msa0933580 MtrunA17_Chr7g0271211 50.265 189 88 3 163 349 27 211 7.90e-50 166
Msa0933580 MtrunA17_Chr7g0271211 54.839 155 61 4 22 171 20 170 4.03e-41 143
Msa0933580 MtrunA17_Chr1g0193421 45.729 199 102 3 153 349 21 215 4.93e-47 159
Msa0933580 MtrunA17_Chr1g0193421 49.068 161 73 4 18 173 20 176 1.82e-38 136
Msa0933580 MtrunA17_Chr5g0414971 46.154 182 93 3 171 349 40 219 2.13e-43 149
Msa0933580 MtrunA17_Chr5g0414971 50.000 158 69 5 22 173 27 180 1.25e-36 132
Msa0933580 MtrunA17_Chr1g0210761 47.059 170 85 3 181 349 42 207 8.15e-41 142
Msa0933580 MtrunA17_Chr1g0210761 42.373 177 86 6 2 173 5 170 9.86e-32 118
Msa0933580 MtrunA17_Chr8g0344021 44.865 185 92 4 143 323 6 184 8.79e-40 140
Msa0933580 MtrunA17_Chr8g0344021 43.407 182 81 6 1 173 3 171 1.27e-33 124
Msa0933580 MtrunA17_Chr2g0300561 45.614 171 87 3 178 346 37 203 6.48e-39 137
Msa0933580 MtrunA17_Chr2g0300561 44.382 178 83 5 1 173 3 169 2.30e-33 123
Msa0933580 MtrunA17_Chr1g0178711 41.765 170 94 3 181 349 56 221 6.40e-37 132
Msa0933580 MtrunA17_Chr1g0178711 39.766 171 92 4 12 173 16 184 5.16e-29 112
Msa0933580 MtrunA17_Chr2g0300581 41.279 172 95 3 178 347 37 204 8.15e-34 124
Msa0933580 MtrunA17_Chr2g0300581 42.697 178 86 5 1 173 3 169 1.65e-32 120
Msa0933580 MtrunA17_Chr2g0300591 41.520 171 94 3 178 346 37 203 1.09e-33 124
Msa0933580 MtrunA17_Chr2g0300591 42.697 178 86 5 1 173 3 169 2.23e-32 120
Msa0933580 MtrunA17_Chr8g0343934 36.893 206 122 4 145 349 7 205 1.82e-32 120
Msa0933580 MtrunA17_Chr8g0343934 41.618 173 87 5 5 173 6 168 1.34e-27 107
Msa0933580 MtrunA17_Chr8g0343954 40.230 174 98 3 177 349 37 205 1.38e-31 118
Msa0933580 MtrunA17_Chr8g0343954 44.667 150 74 4 28 173 24 168 4.32e-26 103
Msa0933580 MtrunA17_Chr3g0084531 40.230 174 98 3 177 349 37 205 1.43e-31 118
Msa0933580 MtrunA17_Chr3g0084531 41.618 173 87 5 5 173 6 168 8.52e-26 102
Msa0933580 MtrunA17_Chr2g0302171 38.947 190 108 4 161 349 23 205 4.69e-31 117
Msa0933580 MtrunA17_Chr2g0302171 40.230 174 90 5 5 174 6 169 2.59e-24 99.0
Msa0933580 MtrunA17_Chr4g0003361 38.542 192 109 5 159 349 18 201 1.98e-30 115
Msa0933580 MtrunA17_Chr4g0003361 43.704 135 68 4 43 173 34 164 2.72e-22 93.2
Msa0933580 MtrunA17_Chr8g0335851 40.854 164 93 3 171 333 41 201 4.53e-30 114
Msa0933580 MtrunA17_Chr8g0335851 41.026 156 86 3 22 173 26 179 4.80e-28 109
Msa0933580 MtrunA17_Chr2g0297231 37.500 200 115 5 153 349 13 205 6.59e-30 114
Msa0933580 MtrunA17_Chr2g0297231 41.250 160 85 4 18 173 14 168 1.92e-25 102
Msa0933580 MtrunA17_Chr2g0313961 36.816 201 121 3 150 349 10 205 9.33e-30 113
Msa0933580 MtrunA17_Chr2g0313961 41.875 160 84 4 18 173 14 168 7.23e-26 103
Msa0933580 MtrunA17_Chr3g0084511 38.506 174 101 3 177 349 36 204 1.73e-29 112
Msa0933580 MtrunA17_Chr3g0084511 40.462 173 88 5 5 173 6 167 1.30e-24 99.8
Msa0933580 MtrunA17_Chr8g0343911 38.150 173 101 3 177 347 34 202 2.02e-29 112
Msa0933580 MtrunA17_Chr8g0343911 41.176 153 81 4 26 173 19 167 1.53e-25 102
Msa0933580 MtrunA17_Chr2g0297241 37.500 200 115 5 153 349 13 205 2.08e-29 112
Msa0933580 MtrunA17_Chr2g0297241 41.250 160 85 4 18 173 14 168 2.58e-25 101
Msa0933580 MtrunA17_Chr8g0344051 36.190 210 124 4 143 349 6 208 3.39e-29 112
Msa0933580 MtrunA17_Chr8g0344051 40.113 177 84 6 5 172 7 170 4.18e-25 101
Msa0933580 MtrunA17_Chr8g0343961 38.728 173 100 3 178 349 38 205 5.45e-29 111
Msa0933580 MtrunA17_Chr8g0343961 39.429 175 92 6 3 173 4 168 6.97e-24 97.8
Msa0933580 MtrunA17_Chr3g0084521 38.506 174 101 3 177 349 36 204 8.39e-29 110
Msa0933580 MtrunA17_Chr3g0084521 41.040 173 87 5 5 173 6 167 1.27e-25 102
Msa0933580 MtrunA17_Chr8g0343921 40.437 183 98 6 169 349 30 203 3.60e-28 109
Msa0933580 MtrunA17_Chr8g0343921 39.735 151 80 6 28 173 22 166 5.36e-20 87.0
Msa0933580 MtrunA17_Chr2g0301611 36.842 190 112 4 161 349 23 205 2.39e-27 107
Msa0933580 MtrunA17_Chr2g0301611 40.000 160 87 4 18 173 14 168 1.07e-23 97.1
Msa0933580 MtrunA17_Chr8g0344031 35.885 209 120 5 148 349 6 207 4.90e-27 106
Msa0933580 MtrunA17_Chr8g0344031 38.728 173 97 4 5 173 3 170 1.68e-22 94.0
Msa0933580 MtrunA17_Chr8g0344041 35.602 191 114 4 161 349 26 209 7.38e-27 105
Msa0933580 MtrunA17_Chr8g0344041 39.355 155 84 4 24 173 23 172 3.04e-21 90.5
Msa0933580 MtrunA17_Chr3g0130241 35.393 178 111 3 169 345 102 276 1.02e-26 107
Msa0933580 MtrunA17_Chr3g0130241 35.000 180 108 4 1 173 65 242 1.13e-22 96.3
Msa0933580 MtrunA17_Chr4g0026201 41.259 143 79 3 208 349 67 205 1.63e-26 104
Msa0933580 MtrunA17_Chr4g0026201 41.748 103 54 3 74 172 67 167 4.63e-16 76.3
Msa0933580 MtrunA17_Chr4g0026191 41.259 143 79 3 208 349 67 205 1.65e-26 104
Msa0933580 MtrunA17_Chr4g0026191 41.748 103 54 3 74 172 67 167 4.91e-16 75.9
Msa0933580 MtrunA17_Chr2g0321581 42.963 135 72 3 216 349 74 204 5.31e-26 103
Msa0933580 MtrunA17_Chr2g0321581 34.807 181 86 8 2 172 8 166 9.39e-17 78.2
Msa0933580 MtrunA17_Chr2g0321591 42.963 135 72 3 216 349 74 204 7.23e-26 102
Msa0933580 MtrunA17_Chr2g0321591 35.028 177 83 8 6 172 12 166 1.29e-16 77.8
Msa0933580 MtrunA17_Chr2g0321601 42.222 135 73 3 216 349 73 203 1.78e-25 102
Msa0933580 MtrunA17_Chr2g0321601 33.714 175 96 6 2 172 7 165 2.65e-16 76.6
Msa0933580 MtrunA17_Chr2g0302541 36.782 174 104 3 177 349 37 205 6.98e-25 100
Msa0933580 MtrunA17_Chr2g0302541 40.789 152 81 4 26 173 22 168 1.88e-21 91.3
Msa0933580 MtrunA17_Chr4g0012651 36.471 170 102 3 181 349 41 205 1.24e-24 99.8
Msa0933580 MtrunA17_Chr4g0012651 41.447 152 80 4 26 173 22 168 2.43e-20 88.2
Msa0933580 MtrunA17_Chr5g0411961 35.429 175 107 3 176 349 36 205 1.98e-24 99.4
Msa0933580 MtrunA17_Chr5g0411961 37.500 160 91 4 18 173 14 168 1.96e-21 90.9
Msa0933580 MtrunA17_Chr7g0217811 35.632 174 106 3 177 349 37 205 4.18e-24 98.2
Msa0933580 MtrunA17_Chr7g0217811 40.789 152 81 4 26 173 22 168 3.06e-20 87.8
Msa0933580 MtrunA17_Chr2g0286171 34.555 191 115 5 160 349 27 208 5.55e-24 98.2
Msa0933580 MtrunA17_Chr2g0286171 38.889 180 98 6 1 175 1 173 6.33e-22 92.4
Msa0933580 MtrunA17_Chr3g0115141 35.079 191 114 5 160 349 25 206 1.09e-23 97.1
Msa0933580 MtrunA17_Chr3g0115141 43.421 152 75 5 28 175 27 171 7.27e-22 92.4
Msa0933580 MtrunA17_Chr2g0292881 71.930 57 16 0 227 283 1 57 2.09e-21 86.3
Msa0933580 MtrunA17_Chr2g0292881 64.912 57 17 1 93 146 1 57 2.21e-17 75.5
Msa0933580 MtrunA17_Chr3g0084551 36.076 158 90 6 18 173 14 162 5.21e-15 73.6
Msa0933580 MtrunA17_Chr3g0084551 30.769 208 122 9 143 346 7 196 6.27e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0933580 AT5G38940.1 64.550 189 65 1 163 349 33 221 4.03e-79 242
Msa0933580 AT5G38940.1 68.790 157 44 2 22 173 26 182 2.80e-68 214
Msa0933580 AT5G38940.2 64.550 189 65 1 163 349 57 245 8.64e-79 242
Msa0933580 AT5G38940.2 68.790 157 44 2 22 173 50 206 5.03e-68 214
Msa0933580 AT5G38930.1 67.760 183 57 1 169 349 39 221 1.92e-78 240
Msa0933580 AT5G38930.1 68.553 159 45 2 20 173 24 182 5.90e-68 213
Msa0933580 AT5G39110.1 65.385 182 60 2 171 349 39 220 7.12e-76 233
Msa0933580 AT5G39110.1 65.143 175 55 3 4 172 6 180 1.14e-68 215
Msa0933580 AT3G05950.1 68.156 179 54 2 174 349 43 221 4.65e-75 231
Msa0933580 AT3G05950.1 66.471 170 49 5 11 173 14 182 1.36e-64 205
Msa0933580 AT5G39160.1 65.922 179 58 2 174 349 41 219 7.26e-75 231
Msa0933580 AT5G39160.1 67.296 159 45 4 20 172 22 179 1.70e-64 204
Msa0933580 AT5G39190.1 65.922 179 58 2 174 349 41 219 9.72e-75 230
Msa0933580 AT5G39190.1 67.296 159 45 4 20 172 22 179 2.33e-64 204
Msa0933580 AT5G38910.1 67.416 178 56 2 174 349 42 219 1.44e-74 230
Msa0933580 AT5G38910.1 63.333 180 59 5 1 173 1 180 6.88e-66 208
Msa0933580 AT5G38960.1 65.746 181 59 2 172 349 42 222 1.48e-74 230
Msa0933580 AT5G38960.1 65.432 162 50 3 18 173 22 183 2.96e-65 206
Msa0933580 AT5G39130.1 65.363 179 59 2 174 349 41 219 1.53e-74 230
Msa0933580 AT5G39130.1 66.667 159 46 4 20 172 22 179 2.96e-64 204
Msa0933580 AT5G39150.1 64.835 182 61 2 171 349 38 219 4.07e-74 229
Msa0933580 AT5G39150.1 65.363 179 55 4 1 172 1 179 8.97e-70 218
Msa0933580 AT5G39120.1 64.835 182 61 2 171 349 38 219 5.45e-74 228
Msa0933580 AT5G39120.1 65.922 179 54 4 1 172 1 179 9.53e-71 220
Msa0933580 AT5G39180.1 64.835 182 61 2 171 349 38 219 6.49e-74 228
Msa0933580 AT5G39180.1 65.363 179 55 4 1 172 1 179 9.26e-70 218
Msa0933580 AT3G04200.1 66.848 184 58 2 169 349 39 222 2.86e-73 227
Msa0933580 AT3G04200.1 60.335 179 61 5 1 173 9 183 7.93e-61 195
Msa0933580 AT5G39160.3 65.143 175 58 2 178 349 41 215 1.00e-71 223
Msa0933580 AT5G39160.3 64.151 159 46 4 20 172 22 175 8.88e-60 192
Msa0933580 AT4G14630.1 64.804 179 60 2 174 349 44 222 2.49e-71 222
Msa0933580 AT4G14630.1 65.409 159 49 3 20 172 24 182 1.75e-62 199
Msa0933580 AT5G39160.2 67.105 152 49 1 199 349 46 197 1.53e-63 201
Msa0933580 AT5G39160.2 59.236 157 39 4 20 172 22 157 1.33e-50 168
Msa0933580 AT5G39190.2 67.105 152 49 1 199 349 46 197 1.65e-63 201
Msa0933580 AT5G39190.2 58.599 157 40 3 20 172 22 157 6.76e-51 169
Msa0933580 AT3G04150.1 59.669 181 70 2 172 349 41 221 4.01e-63 201
Msa0933580 AT3G04150.1 55.738 183 70 6 1 173 1 182 2.77e-53 176
Msa0933580 AT3G04150.2 59.777 179 69 2 174 349 56 234 1.18e-62 200
Msa0933580 AT3G04150.2 51.795 195 72 6 1 173 1 195 4.08e-51 171
Msa0933580 AT3G04190.1 59.116 181 71 2 172 349 41 221 2.79e-60 193
Msa0933580 AT3G04190.1 58.182 165 62 4 15 173 19 182 2.51e-54 178
Msa0933580 AT3G04170.1 54.839 186 78 3 167 349 36 218 1.63e-57 186
Msa0933580 AT3G04170.1 55.747 174 66 6 11 177 14 183 5.62e-50 167
Msa0933580 AT3G04180.1 55.249 181 78 2 172 349 41 221 1.55e-56 184
Msa0933580 AT3G04180.1 55.758 165 66 4 15 173 19 182 3.29e-51 170
Msa0933580 AT1G09560.1 48.947 190 91 3 163 350 31 216 3.28e-49 165
Msa0933580 AT1G09560.1 53.503 157 64 4 22 173 24 176 1.64e-40 142
Msa0933580 AT5G38910.2 52.809 178 45 3 174 349 42 182 3.48e-48 161
Msa0933580 AT5G38910.2 50.282 177 50 5 1 173 1 143 9.66e-42 144
Msa0933580 AT5G26700.1 47.644 191 87 5 163 349 28 209 5.55e-48 161
Msa0933580 AT5G26700.1 51.176 170 64 6 11 173 16 173 7.66e-42 145
Msa0933580 AT1G02335.1 46.591 176 90 2 176 349 42 215 6.52e-47 159
Msa0933580 AT1G02335.1 46.328 177 85 5 2 173 5 176 1.92e-39 139
Msa0933580 AT1G18970.1 47.753 178 87 3 176 351 47 220 1.79e-46 158
Msa0933580 AT1G18970.1 45.349 172 83 5 7 173 14 179 1.07e-33 124
Msa0933580 AT3G62020.2 48.588 177 86 3 176 349 12 186 5.32e-46 155
Msa0933580 AT3G62020.2 51.064 141 61 4 39 173 9 147 1.08e-32 121
Msa0933580 AT1G18980.1 48.315 178 86 3 176 351 47 220 5.62e-46 156
Msa0933580 AT1G18980.1 49.682 157 68 5 22 173 29 179 1.74e-34 126
Msa0933580 AT3G05930.1 45.763 177 91 2 176 349 41 215 7.60e-46 156
Msa0933580 AT3G05930.1 48.619 181 80 6 1 173 1 176 1.77e-42 147
Msa0933580 AT3G62020.1 48.588 177 86 3 176 349 41 215 1.17e-45 155
Msa0933580 AT3G62020.1 49.133 173 78 5 7 173 8 176 8.46e-40 140
Msa0933580 AT1G10460.1 43.243 185 99 4 169 349 33 215 3.08e-43 149
Msa0933580 AT1G10460.1 46.875 160 75 6 22 173 19 176 1.18e-37 135
Msa0933580 AT3G10080.1 43.529 170 91 3 181 349 54 219 4.42e-38 136
Msa0933580 AT3G10080.1 41.358 162 86 4 19 173 23 182 3.27e-30 115
Msa0933580 AT3G10080.2 43.529 170 91 3 181 349 125 290 3.35e-37 136
Msa0933580 AT3G10080.2 41.104 163 87 4 18 173 93 253 1.53e-29 115
Msa0933580 AT5G20630.1 42.775 173 94 3 171 341 31 200 7.36e-36 130
Msa0933580 AT5G20630.1 42.697 178 87 5 1 173 3 170 1.29e-32 121
Msa0933580 AT5G61750.1 45.238 168 84 4 170 332 33 197 1.28e-35 129
Msa0933580 AT5G61750.1 41.011 178 93 4 5 177 7 177 2.65e-31 117
Msa0933580 AT1G74820.1 39.429 175 100 3 177 349 55 225 5.52e-32 120
Msa0933580 AT1G74820.1 41.463 164 77 6 8 158 14 171 2.61e-21 91.7
Msa0933580 AT1G72610.1 39.181 171 98 3 178 346 35 201 4.21e-30 114
Msa0933580 AT1G72610.1 41.176 153 81 4 26 173 19 167 6.58e-25 100
Msa0933580 AT5G38950.1 60.563 71 28 0 278 348 2 72 1.73e-20 85.9

Find 78 sgRNAs with CRISPR-Local

Find 805 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTGCTAATGCTGTATT+TGG 0.046653 6_3:+2112264 Msa0933580:CDS
CTTGTTTGTGACAGCCTTCT+TGG 0.121595 6_3:+2099381 Msa0933580:CDS
GTAACCGTTAACGAGATATT+AGG 0.210042 6_3:+2099769 Msa0933580:CDS
TAGTAATAACACCTGGATTT+TGG 0.212711 6_3:-2112245 None:intergenic
TAGTGATAACACCTGGATTT+TGG 0.245631 6_3:-2100056 Msa0933570:intron
AGAACTTCTGAAGAGATCTT+TGG 0.276106 6_3:-2112294 None:intergenic
TTCACTTTCAATTGAATGTT+GGG 0.325573 6_3:+2099998 Msa0933580:CDS
TTCACTTTCAATTGAATGTT+GGG 0.325573 6_3:+2112187 Msa0933580:CDS
GGAAATGCTCTCGCCATTGC+TGG 0.341695 6_3:+2100024 Msa0933580:CDS
GGAAATGCTCTCGCCATTGC+TGG 0.341695 6_3:+2112213 Msa0933580:CDS
AGTATACATACCACCATTCT+TGG 0.356363 6_3:-2099473 Msa0933570:intron
TCATTTGGTGTAGCAAGCTT+TGG 0.358003 6_3:-2099685 Msa0933570:intron
ATTATCCACTTGAAAAGCTT+TGG 0.360758 6_3:-2112319 None:intergenic
CTCGCGTTGACTTTGCATCT+AGG 0.379629 6_3:+2099818 Msa0933580:CDS
TCATTTGCCGTAGCATGCTT+TGG 0.383442 6_3:-2111874 None:intergenic
ATCACAAAAGTACTAAATAA+AGG 0.392770 6_3:+2099946 Msa0933580:CDS
TAACCGTTAACGAGATATTA+GGG 0.393305 6_3:+2099770 Msa0933580:CDS
TAACCCTAATATCTCGTTAA+CGG 0.394123 6_3:-2099773 Msa0933570:intron
TAGTCCTAGTATCTCATTAA+CGG 0.408621 6_3:-2111962 None:intergenic
TGAAAGTGAATGAGGCCAAT+TGG 0.419001 6_3:-2099985 Msa0933570:intron
TGAAAGTGAATGAGGCCAAT+TGG 0.419001 6_3:-2112174 None:intergenic
CTATTGCTAATGCTGTATTT+GGG 0.423500 6_3:+2112265 Msa0933580:CDS
AGTATCTCATTAACGGTAAC+CGG 0.427049 6_3:-2111955 None:intergenic
TCGTATTGACTTTGCATCTA+GGG 0.428209 6_3:+2112008 Msa0933580:CDS
ATTCACTTTCAATTGAATGT+TGG 0.434824 6_3:+2099997 Msa0933580:CDS
ATTCACTTTCAATTGAATGT+TGG 0.434824 6_3:+2112186 Msa0933580:CDS
TCGCGTTGACTTTGCATCTA+GGG 0.434930 6_3:+2099819 Msa0933580:CDS
TTTCAATTGAATGTTGGGTA+TGG 0.435827 6_3:+2100003 Msa0933580:CDS
TTTCAATTGAATGTTGGGTA+TGG 0.435827 6_3:+2112192 Msa0933580:CDS
GATGTCTTCGTGTTTCCAAT+TGG 0.447280 6_3:+2112159 Msa0933580:CDS
CTCGTATTGACTTTGCATCT+AGG 0.450503 6_3:+2112007 Msa0933580:CDS
ACAAAAGTCTTGTAGAGGGC+TGG 0.457530 6_3:-2099434 Msa0933570:intron
GATGTGTTTGTGTTTCCAAT+TGG 0.461413 6_3:+2099970 Msa0933580:CDS
ATAAGAATTTCAGTGGCTCT+AGG 0.464256 6_3:-2099865 Msa0933570:intron
ATAAGAATCTCAGTGGCTCT+AGG 0.464256 6_3:-2112054 None:intergenic
TTCTTCTACTCGGTGAAAGA+AGG 0.467010 6_3:+2111898 Msa0933580:CDS
CAAAAGTCTTGTAGAGGGCT+GGG 0.476086 6_3:-2099433 Msa0933570:intron
TGAGATTCTTATAGTGTTGG+AGG 0.480868 6_3:+2112065 Msa0933580:CDS
TGGAGGGTACACTTTATGTC+GGG 0.491331 6_3:+2099893 Msa0933580:intron
TGGAGGGTACTCTCTATGTC+GGG 0.514884 6_3:+2112082 Msa0933580:CDS
TTGGAGGGTACACTTTATGT+CGG 0.515920 6_3:+2099892 Msa0933580:intron
CACTGAGATTCTTATAGTGT+TGG 0.518785 6_3:+2112062 Msa0933580:CDS
TTGTAGAGGGCTGGGATCAA+AGG 0.523699 6_3:-2099425 Msa0933570:intron
TTGGAGGGTACTCTCTATGT+CGG 0.525841 6_3:+2112081 Msa0933580:CDS
CGCGTTGACTTTGCATCTAG+GGG 0.532914 6_3:+2099820 Msa0933580:CDS
TAAGAATTTCAGTGGCTCTA+GGG 0.535161 6_3:-2099864 Msa0933570:intron
TAAGAATCTCAGTGGCTCTA+GGG 0.542644 6_3:-2112053 None:intergenic
GTGGCTCTAGGGTGAGTATG+TGG 0.548107 6_3:-2112042 None:intergenic
GGACTTAGCAGCCAAAATCC+AGG 0.549743 6_3:+2100045 Msa0933580:CDS
GGACTTAGCAGCCAAAATCC+AGG 0.549743 6_3:+2112234 Msa0933580:CDS
GTGGCTCTAGGGTGAGTATG+TGG 0.550279 6_3:-2099853 Msa0933570:intron
CATTCAATTGAAAGTGAATG+AGG 0.551568 6_3:-2099993 Msa0933570:intron
CATTCAATTGAAAGTGAATG+AGG 0.551568 6_3:-2112182 None:intergenic
GGCAAATGATTTCTTCTACT+CGG 0.569753 6_3:+2111888 Msa0933580:CDS
GTTACCGTTAATGAGATACT+AGG 0.571440 6_3:+2111958 Msa0933580:CDS
ATACTAGGACTAAACACTCT+AGG 0.572011 6_3:+2111973 Msa0933580:CDS
ACAAGATGCTAAAGCCAAGA+AGG 0.574992 6_3:-2099395 Msa0933570:intron
CGTATTGACTTTGCATCTAG+GGG 0.590107 6_3:+2112009 Msa0933580:CDS
CAAGGATCCAAAGCATGCTA+CGG 0.595077 6_3:+2111867 Msa0933580:CDS
TTGGCTGCTAAGTCCAGCAA+TGG 0.600072 6_3:-2100037 Msa0933570:intron
TTGGCTGCTAAGTCCAGCAA+TGG 0.600072 6_3:-2112226 None:intergenic
ATATTAGGGTTAAACACACT+TGG 0.603049 6_3:+2099784 Msa0933580:CDS
GCCACACAAAAGTCTTGTAG+AGG 0.603085 6_3:-2099439 Msa0933570:intron
GAGATTCTTATAGTGTTGGA+GGG 0.619014 6_3:+2112066 Msa0933580:CDS
ATCAATGACACCAAGAATGG+TGG 0.627435 6_3:+2099463 Msa0933580:CDS
CAAAACTATAAGAATTTCAG+TGG 0.632768 6_3:-2099872 Msa0933570:intron
GCTATCAATGACACCAAGAA+TGG 0.633041 6_3:+2099460 Msa0933580:CDS
GGAAATACATCAAATCCACT+TGG 0.640192 6_3:+2111919 Msa0933580:CDS
AGGGCTGGGATCAAAGGCAA+AGG 0.641928 6_3:-2099419 Msa0933570:intron
ATCACAAAAGTACTCAACAA+AGG 0.644517 6_3:+2112135 Msa0933580:CDS
CCACACAAAAGTCTTGTAGA+GGG 0.655758 6_3:-2099438 Msa0933570:intron
GGAAACACGTCAAATCCACT+TGG 0.662851 6_3:+2099730 Msa0933580:CDS
ACTTGGTTCAAAAGTGACAC+CGG 0.669513 6_3:+2111936 Msa0933580:CDS
GCTCTAGGGTGAGTATGTGG+AGG 0.673911 6_3:-2099850 Msa0933570:intron
GCTCTAGGGTGAGTATGTGG+AGG 0.673911 6_3:-2112039 None:intergenic
TTAGCAATAGTAATAACACC+TGG 0.687379 6_3:-2112252 None:intergenic
TGTGAATGGCAAATTCTGCA+AGG 0.691037 6_3:+2111849 Msa0933580:CDS
CAACACTATAAGAATCTCAG+TGG 0.721951 6_3:-2112061 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTAAATAAAATGCA+AGG + chr6_3:2100252-2100271 Msa0933580:intron 10.0%
!!! TCATTTTTTTAAGAATTAAA+GGG - chr6_3:2100913-2100932 Msa0933570:intron 10.0%
!!! TTCATTTTTTTAAGAATTAA+AGG - chr6_3:2100914-2100933 Msa0933570:intron 10.0%
!! ATTGAAATTTATCTAATTTA+AGG + chr6_3:2102051-2102070 Msa0933580:intron 10.0%
!! TTGAAATTTATCTAATTTAA+GGG + chr6_3:2102052-2102071 Msa0933580:intron 10.0%
!! TTACATTTATATCAAATAAA+AGG - chr6_3:2103145-2103164 None:intergenic 10.0%
!!! ACATTCAATTTTATATTTTT+TGG + chr6_3:2103359-2103378 Msa0933580:intron 10.0%
!!! TTTTTACAATATATATGATT+GGG - chr6_3:2103868-2103887 None:intergenic 10.0%
!!! TTTTTTACAATATATATGAT+TGG - chr6_3:2103869-2103888 None:intergenic 10.0%
!!! ATTTATTTTTTGTTGATAAA+TGG - chr6_3:2104044-2104063 None:intergenic 10.0%
!!! TTGATTATTATTTTTATTAG+AGG + chr6_3:2104391-2104410 Msa0933580:intron 10.0%
!! AAAATTAATTATAACATTAG+AGG - chr6_3:2104647-2104666 None:intergenic 10.0%
!! AAACTTAAACAATAAATAAT+AGG + chr6_3:2104841-2104860 Msa0933580:intron 10.0%
!! AAATTTAACAATAAATTTAG+TGG + chr6_3:2105005-2105024 Msa0933580:intron 10.0%
!!! TTTTTAGTTATGATTTATTT+TGG + chr6_3:2106281-2106300 Msa0933580:intron 10.0%
!! ATTAAAAATAATGTGTAAAA+CGG - chr6_3:2108673-2108692 Msa0933590:intron 10.0%
!!! AAAATGATATTTAAATTTTG+AGG + chr6_3:2108949-2108968 Msa0933580:intron 10.0%
!!! ATAAAATATGATTTGTTTTT+TGG - chr6_3:2109432-2109451 Msa0933590:intron 10.0%
!!! GTATTTTATAAGTAAAAATA+TGG + chr6_3:2111387-2111406 Msa0933580:intron 10.0%
!! AAAGAAATCATTAAAAGATA+TGG - chr6_3:2099511-2099530 Msa0933570:intron 15.0%
!!! TTTATTTACTTTTAGTTTTC+TGG + chr6_3:2099528-2099547 Msa0933580:intron 15.0%
!!! CATTTAAGATAAATGAATTT+TGG + chr6_3:2100426-2100445 Msa0933580:intron 15.0%
!! TTACTTATGAAAATTATCTT+TGG + chr6_3:2100699-2100718 Msa0933580:intron 15.0%
!! ATAAGTATTTGATATTGTTA+AGG + chr6_3:2100817-2100836 Msa0933580:intron 15.0%
!!! ATTTAAAATAAACACATAGT+GGG - chr6_3:2101157-2101176 Msa0933570:intron 15.0%
!!! AATTTAAAATAAACACATAG+TGG - chr6_3:2101158-2101177 Msa0933570:intron 15.0%
!! AAATTTATCTCAATTATTGT+TGG - chr6_3:2101195-2101214 Msa0933570:intron 15.0%
!! GTTATAATGTTATAATACAA+TGG + chr6_3:2101815-2101834 Msa0933580:intron 15.0%
!! AAATGTATTTGATCTAAATT+TGG + chr6_3:2102119-2102138 Msa0933580:intron 15.0%
!! CAATGAAAAAATCATTAAAT+TGG - chr6_3:2103054-2103073 None:intergenic 15.0%
!!! GATAATTGAATGTTTTTTTA+GGG - chr6_3:2103331-2103350 None:intergenic 15.0%
!!! TGATAATTGAATGTTTTTTT+AGG - chr6_3:2103332-2103351 None:intergenic 15.0%
!!! TTCAATTTTATATTTTTTGG+TGG + chr6_3:2103362-2103381 Msa0933580:intron 15.0%
!!! ATATAATTTTTTTTTTGTGG+TGG - chr6_3:2103660-2103679 None:intergenic 15.0%
!! AATAATTTAATGATTGTGAT+TGG - chr6_3:2103762-2103781 None:intergenic 15.0%
!!! TTTTAATATGTTCGATAATA+CGG - chr6_3:2104459-2104478 None:intergenic 15.0%
!!! AAAAAACGTTTATTTTCTAT+AGG - chr6_3:2104884-2104903 None:intergenic 15.0%
!!! ACTATAAAATTGTGTATTTT+TGG + chr6_3:2106235-2106254 Msa0933580:intron 15.0%
!!! TCAAATTTTTTAAGTTTTGT+AGG - chr6_3:2107151-2107170 Msa0933590:intron 15.0%
!! AAATTACTAACAATAAATTC+CGG + chr6_3:2108209-2108228 Msa0933580:intron 15.0%
!!! TTTAAATTCCCTTTAATTTT+AGG - chr6_3:2108505-2108524 Msa0933590:intron 15.0%
!!! AAATTTTTGATTGAGTTTTA+TGG + chr6_3:2108849-2108868 Msa0933580:intron 15.0%
!! ATAAAAACAACATGATTATA+TGG - chr6_3:2108888-2108907 Msa0933590:intron 15.0%
!! TTTAATTATAACTATCAACA+TGG + chr6_3:2109504-2109523 Msa0933580:intron 15.0%
!! TTGATTAATTAAGATTTACT+TGG - chr6_3:2110514-2110533 Msa0933590:intron 15.0%
!! GTTATTTACTAAAATTCATA+TGG - chr6_3:2110816-2110835 None:intergenic 15.0%
!! TTGCTAAAAATAAAACATAA+GGG - chr6_3:2111112-2111131 None:intergenic 15.0%
!! TTTAATCATAAAAATTCAAC+AGG + chr6_3:2111223-2111242 Msa0933580:intron 15.0%
!!! ATCACAAAAGTACTAAATAA+AGG + chr6_3:2099946-2099965 Msa0933580:CDS 20.0%
!!! ACAATCTTCAAAAACAATTT+TGG + chr6_3:2100163-2100182 Msa0933580:intron 20.0%
!!! CAATCTTCAAAAACAATTTT+GGG + chr6_3:2100164-2100183 Msa0933580:intron 20.0%
!!! TTGCTTCTTTCATTTTTTAA+GGG + chr6_3:2100288-2100307 Msa0933580:intron 20.0%
!! TTCAAATTATAAGCACAAAT+AGG + chr6_3:2100566-2100585 Msa0933580:intron 20.0%
!! CTTATATACTTTATAGAGAT+AGG - chr6_3:2100802-2100821 Msa0933570:intron 20.0%
!! GTAAAAAAAAATTGACCAAA+AGG + chr6_3:2100961-2100980 Msa0933580:intron 20.0%
!!! GAAATACATTTTATCAAACT+TGG - chr6_3:2101079-2101098 Msa0933570:intron 20.0%
!!! TTTAAAATAAACACATAGTG+GGG - chr6_3:2101156-2101175 Msa0933570:intron 20.0%
!! ATATTAGGTTTAAATACTCT+TGG - chr6_3:2101641-2101660 Msa0933570:CDS 20.0%
!!! ATCAATTTAATTTTCAGTGT+TGG - chr6_3:2101786-2101805 Msa0933570:intron 20.0%
!!! TTTTATGAGAGATGATATTT+GGG + chr6_3:2102852-2102871 Msa0933580:intron 20.0%
!!! TACAATTTTCAGTAAAAGTA+TGG - chr6_3:2102923-2102942 None:intergenic 20.0%
!!! GTGTTTTGTACATATTTTTT+TGG - chr6_3:2103082-2103101 None:intergenic 20.0%
!!! CTGTAGATATTTTTTTTGTT+TGG + chr6_3:2103178-2103197 Msa0933580:intron 20.0%
!!! TAGATATTTTTTTTGTTTGG+AGG + chr6_3:2103181-2103200 Msa0933580:intron 20.0%
!!! AGATATTTTTTTTGTTTGGA+GGG + chr6_3:2103182-2103201 Msa0933580:intron 20.0%
!!! AATTTTATATTTTTTGGTGG+TGG + chr6_3:2103365-2103384 Msa0933580:intron 20.0%
!! GATAATGTATAATATATGCA+AGG - chr6_3:2103410-2103429 None:intergenic 20.0%
!!! TTGATAATATATGTGCATAT+CGG - chr6_3:2104196-2104215 None:intergenic 20.0%
!! AGTAAAATCTCAAAATTGTT+AGG - chr6_3:2104347-2104366 None:intergenic 20.0%
!!! TTTGTAACTTACTTTTGATA+GGG - chr6_3:2104775-2104794 None:intergenic 20.0%
!!! ATTTGTAACTTACTTTTGAT+AGG - chr6_3:2104776-2104795 None:intergenic 20.0%
!! AATAAAATAAAATGTGAGGT+TGG - chr6_3:2104938-2104957 None:intergenic 20.0%
!! CTAGAATAAAATAAAATGTG+AGG - chr6_3:2104942-2104961 None:intergenic 20.0%
!! GTAAATATAACAATATCACA+AGG + chr6_3:2104969-2104988 Msa0933580:intron 20.0%
!!! CAATCTTCAAAAACAATTTT+GGG - chr6_3:2100164-2100183 Msa0933570:intron 20.0%
!!! ACAATCTTCAAAAACAATTT+TGG - chr6_3:2100163-2100182 Msa0933570:intron 20.0%
!! TATGTATATATCAATGTTGT+CGG + chr6_3:2105647-2105666 Msa0933580:intron 20.0%
!! ATGATGATACCATATATTTA+GGG + chr6_3:2106182-2106201 Msa0933580:intron 20.0%
!!! GTATTTTTGGAATTTTTACA+GGG - chr6_3:2106718-2106737 Msa0933590:intron 20.0%
!! CTTAAAAAATTTGAAGAGAA+TGG + chr6_3:2107157-2107176 Msa0933580:intron 20.0%
!! GGTAAAATTGGAAAAAAATA+GGG + chr6_3:2108252-2108271 Msa0933580:intron 20.0%
!! TACGAAAAACCTAAAATTAA+AGG + chr6_3:2108493-2108512 Msa0933580:intron 20.0%
!! ACGAAAAACCTAAAATTAAA+GGG + chr6_3:2108494-2108513 Msa0933580:intron 20.0%
!!! TATTTAAATTTTGAGGAGAA+TGG + chr6_3:2108956-2108975 Msa0933580:intron 20.0%
!! AAACTTCAATTAAAGAGAAA+TGG + chr6_3:2109149-2109168 Msa0933580:intron 20.0%
!! AAGAACTCAAGTTTAAATTT+CGG + chr6_3:2109177-2109196 Msa0933580:intron 20.0%
!!! TAATGTTATTTTATTTCCAG+TGG + chr6_3:2110905-2110924 Msa0933580:intron 20.0%
!! TGCTAAAAATAAAACATAAG+GGG - chr6_3:2111111-2111130 None:intergenic 20.0%
!! CTTGCTAAAAATAAAACATA+AGG - chr6_3:2111113-2111132 None:intergenic 20.0%
!!! ATTAAGCTTGTTAATATTTG+AGG - chr6_3:2111160-2111179 None:intergenic 20.0%
!! TTATGTTATCAATTAAAGAG+AGG - chr6_3:2111194-2111213 None:intergenic 20.0%
!! ATAAAATACATTTAAAGACC+TGG - chr6_3:2111376-2111395 None:intergenic 20.0%
!!! TTTATTTATTTTGACTCGTT+TGG + chr6_3:2111691-2111710 Msa0933580:intron 20.0%
!! TCATATATCCATATATAAGT+AGG + chr6_3:2111784-2111803 Msa0933580:intron 20.0%
!! CATATATCCATATATAAGTA+GGG + chr6_3:2111785-2111804 Msa0933580:intron 20.0%
!!! ACAATCTTCAAAAACAATTT+TGG + chr6_3:2100163-2100182 Msa0933580:intron 20.0%
!!! CAATCTTCAAAAACAATTTT+GGG + chr6_3:2100164-2100183 Msa0933580:intron 20.0%
! ACTGAGAAAAAGAAATCATT+TGG - chr6_3:2099703-2099722 Msa0933570:intron 25.0%
!! TTCTTTTTCTCAGTTAAAGA+AGG + chr6_3:2099709-2099728 Msa0933580:CDS 25.0%
! CAAAACTATAAGAATTTCAG+TGG - chr6_3:2099875-2099894 Msa0933570:intron 25.0%
!! CACTGAAATTCTTATAGTTT+TGG + chr6_3:2099873-2099892 Msa0933580:intron 25.0%
!!! TGAAATTCTTATAGTTTTGG+AGG + chr6_3:2099876-2099895 Msa0933580:intron 25.0%
!!! GAAATTCTTATAGTTTTGGA+GGG + chr6_3:2099877-2099896 Msa0933580:intron 25.0%
! ATTCACTTTCAATTGAATGT+TGG + chr6_3:2099997-2100016 Msa0933580:CDS 25.0%
! TTCACTTTCAATTGAATGTT+GGG + chr6_3:2099998-2100017 Msa0933580:CDS 25.0%
!!! AGAACTTCTGAAGAAATTTT+TGG - chr6_3:2101320-2101339 Msa0933570:CDS 25.0%
! AAACACAAACATAAAATCCA+AGG - chr6_3:2100216-2100235 Msa0933570:intron 25.0%
! CTTAAAAAATGAAAGAAGCA+AGG - chr6_3:2100289-2100308 Msa0933570:intron 25.0%
!!! CTTGCTTCTTTCATTTTTTA+AGG + chr6_3:2100287-2100306 Msa0933580:intron 25.0%
! AAATTATAAGCACAAATAGG+TGG + chr6_3:2100569-2100588 Msa0933580:intron 25.0%
! TTTCTATCCTCATAGTTAAT+GGG - chr6_3:2100635-2100654 Msa0933570:intron 25.0%
! AGTAAAACCAAGTATATCAT+AGG - chr6_3:2100732-2100751 Msa0933570:intron 25.0%
!!! TACTTGGTTTTACTTTTTGT+TGG + chr6_3:2100738-2100757 Msa0933580:intron 25.0%
! AAAAAAAATGTTAGTTGAGC+TGG - chr6_3:2100885-2100904 Msa0933570:intron 25.0%
! AGAGTTTAAATTCAACAAGT+TGG + chr6_3:2101043-2101062 Msa0933580:intron 25.0%
!!! TTAAATTCAACAAGTTGGTT+AGG + chr6_3:2101048-2101067 Msa0933580:intron 25.0%
!! ACATTTTATCAAACTTGGTT+GGG - chr6_3:2101074-2101093 Msa0933570:intron 25.0%
!! TACATTTTATCAAACTTGGT+TGG - chr6_3:2101075-2101094 Msa0933570:intron 25.0%
! AAGAGTTATCACTATTGTTA+AGG - chr6_3:2101360-2101379 Msa0933570:CDS 25.0%
! TAGTGATAACTCTTGAATTA+TGG + chr6_3:2101366-2101385 Msa0933580:intron 25.0%
! ATTACAAAAGTTCTCAACAA+AGG - chr6_3:2101479-2101498 Msa0933570:CDS 25.0%
! TTTAGTGTTTCATATAGTTG+AGG - chr6_3:2101903-2101922 Msa0933570:intron 25.0%
! ATTGACATTCTTTACTTTGA+GGG - chr6_3:2101931-2101950 Msa0933570:intron 25.0%
! GATAAAATACATTTGACCTT+TGG + chr6_3:2102141-2102160 Msa0933580:intron 25.0%
!! AATTTAAAGAATGAGAGTAC+CGG - chr6_3:2102202-2102221 Msa0933570:intron 25.0%
! CTATAAAACATCATTTCGTA+AGG - chr6_3:2102436-2102455 Msa0933570:intron 25.0%
! TGATCTTAGATATAACCAAA+AGG - chr6_3:2102577-2102596 Msa0933570:intron 25.0%
! TATTAACGAAATCAAGACTT+GGG - chr6_3:2102679-2102698 Msa0933570:CDS 25.0%
! TTATTAACGAAATCAAGACT+TGG - chr6_3:2102680-2102699 Msa0933570:CDS 25.0%
!! GTTTTATGAGAGATGATATT+TGG + chr6_3:2102851-2102870 Msa0933580:intron 25.0%
! TGTTTGCATTAATGATAAAG+AGG + chr6_3:2102951-2102970 Msa0933580:intron 25.0%
! AACAATCACGTAAAAGTTAA+CGG - chr6_3:2103013-2103032 None:intergenic 25.0%
! AGTATGTAAAAGAGGAATTA+GGG - chr6_3:2103223-2103242 None:intergenic 25.0%
! TGATTATGAGTATGTAAAAG+AGG - chr6_3:2103231-2103250 None:intergenic 25.0%
! ACATACTCATAATCATATCT+AGG + chr6_3:2103236-2103255 Msa0933580:intron 25.0%
! CATACTCATAATCATATCTA+GGG + chr6_3:2103237-2103256 Msa0933580:intron 25.0%
!!! CAGATTTTTTTTTTTTGTGG+TGG - chr6_3:2103637-2103656 None:intergenic 25.0%
!!! TGGCAGATTTTTTTTTTTTG+TGG - chr6_3:2103640-2103659 None:intergenic 25.0%
! TTCTAAACTCAACATATGAA+TGG + chr6_3:2103810-2103829 Msa0933580:intron 25.0%
! TCCAAAAATCTATCAAATGT+GGG - chr6_3:2103977-2103996 None:intergenic 25.0%
! ATCCAAAAATCTATCAAATG+TGG - chr6_3:2103978-2103997 None:intergenic 25.0%
!!! ATGTAGTAAACTTTGAGATA+TGG + chr6_3:2104493-2104512 Msa0933580:intron 25.0%
!! ATTGCGTTTTTATACTTGTA+GGG - chr6_3:2104578-2104597 None:intergenic 25.0%
!! TATTGCGTTTTTATACTTGT+AGG - chr6_3:2104579-2104598 None:intergenic 25.0%
!!! TTATAACATTAGAGGTACTT+TGG - chr6_3:2104639-2104658 None:intergenic 25.0%
!! AAAATGCAACTTAGTTGATA+AGG - chr6_3:2104727-2104746 None:intergenic 25.0%
! ATTCACTTTCAATTGAATGT+GGG - chr6_3:2099997-2100016 Msa0933570:intron 25.0%
! GTTACTGTTAATGAAATTCT+AGG - chr6_3:2105467-2105486 Msa0933590:CDS 25.0%
! AGAATTTCATTAACAGTAAC+CGG + chr6_3:2105467-2105486 Msa0933580:intron 25.0%
! TCATAGTTCAATCAGTTTAA+CGG + chr6_3:2105800-2105819 Msa0933580:intron 25.0%
! TTTATTCATCTTTACTCGTT+TGG - chr6_3:2105832-2105851 Msa0933590:intron 25.0%
! CATGATGATACCATATATTT+AGG + chr6_3:2106181-2106200 Msa0933580:intron 25.0%
! TTACATTCTCCCTAAATATA+TGG - chr6_3:2106194-2106213 Msa0933590:intron 25.0%
! AACATAACATATTGCATGTT+TGG + chr6_3:2106353-2106372 Msa0933580:intron 25.0%
! ACATAACATATTGCATGTTT+GGG + chr6_3:2106354-2106373 Msa0933580:intron 25.0%
! AATGTGACTTAAATCATGTT+CGG - chr6_3:2106521-2106540 Msa0933590:intron 25.0%
! AACATGATTTAAGTCACATT+GGG + chr6_3:2106521-2106540 Msa0933580:intron 25.0%
!!! TTATTTTTGTCAGTTCATGT+GGG + chr6_3:2106545-2106564 Msa0933580:intron 25.0%
!!! GGTATTTTTGGAATTTTTAC+AGG - chr6_3:2106719-2106738 Msa0933590:intron 25.0%
! AAAAATTCCAAAAATACCTC+TGG + chr6_3:2106721-2106740 Msa0933580:intron 25.0%
!!! TTAGTTTTTTACGAGATTTG+TGG - chr6_3:2106930-2106949 Msa0933590:intron 25.0%
!! ACTTGTTTAAGGCTATAAAT+AGG - chr6_3:2107231-2107250 Msa0933590:intron 25.0%
!! AAATTCCGGAATATATTTTC+CGG - chr6_3:2107444-2107463 Msa0933590:intron 25.0%
! AAATATATTCCGGAATTTGA+TGG + chr6_3:2107446-2107465 Msa0933580:intron 25.0%
! AGGAGATTAGAAATAGATTT+AGG + chr6_3:2107984-2108003 Msa0933580:intron 25.0%
! TAACAATAAATTCCGGATTA+CGG + chr6_3:2108216-2108235 Msa0933580:intron 25.0%
! GGGTAAAATTGGAAAAAAAT+AGG + chr6_3:2108251-2108270 Msa0933580:intron 25.0%
!!! ATTTTAGGTTTTTCGTAGTT+AGG - chr6_3:2108490-2108509 Msa0933590:intron 25.0%
! ATTGTGTAATATTTATGTCC+AGG - chr6_3:2108572-2108591 Msa0933590:intron 25.0%
!!! TTTTTCAACTTACTCTCTTT+TGG - chr6_3:2108776-2108795 Msa0933590:intron 25.0%
!! TTTTATCTCTCATGTAAAAC+TGG + chr6_3:2108902-2108921 Msa0933580:intron 25.0%
! AAACTGGAAATAATATTGAG+TGG + chr6_3:2108918-2108937 Msa0933580:intron 25.0%
! TAATATGAAACAAAGCATAG+AGG - chr6_3:2109064-2109083 Msa0933590:intron 25.0%
! ACCAAATTGTTGAATTTATG+TGG + chr6_3:2109121-2109140 Msa0933580:intron 25.0%
! ACCACATAAATTCAACAATT+TGG - chr6_3:2109125-2109144 Msa0933590:intron 25.0%
! TTCAATTAAAGAGAAATGGT+TGG + chr6_3:2109153-2109172 Msa0933580:intron 25.0%
!! ATTCGATCATTTAAGATAAC+TGG - chr6_3:2109395-2109414 Msa0933590:intron 25.0%
! CAAACAATGATATAAGAGTA+AGG + chr6_3:2109462-2109481 Msa0933580:intron 25.0%
! CAATCTTCAAAAACAATTCT+GGG - chr6_3:2109556-2109575 Msa0933590:intron 25.0%
! ACAATCTTCAAAAACAATTC+TGG - chr6_3:2109557-2109576 Msa0933590:intron 25.0%
!!! AGAACTTCTGAAGAAATTTT+TGG + chr6_3:2101320-2101339 Msa0933580:intron 25.0%
! CATGCTCTATTTATATATGT+TGG + chr6_3:2110116-2110135 Msa0933580:intron 25.0%
! TCATAGTTCAATCAGTTTAA+CGG + chr6_3:2105800-2105819 Msa0933580:intron 25.0%
! TTTATTCATCTTTACTCGTT+TGG - chr6_3:2105832-2105851 Msa0933590:intron 25.0%
!!! ATTGAAGTCTTCATGTTTTT+TGG + chr6_3:2110352-2110371 Msa0933580:intron 25.0%
!! TTGTGTATTTTGCTTGTATA+TGG + chr6_3:2110386-2110405 Msa0933580:intron 25.0%
! TATTTATAAGCAAGTGACAT+TGG + chr6_3:2110450-2110469 Msa0933580:intron 25.0%
!! AAGATTTACTTGGTCTTTAT+AGG - chr6_3:2110504-2110523 Msa0933590:intron 25.0%
!! ATTTTTATGTTCCCATTCTT+TGG + chr6_3:2110660-2110679 Msa0933580:intron 25.0%
! AAGAAGTGAGTAAAATACAT+CGG - chr6_3:2110931-2110950 None:intergenic 25.0%
! TGCTTCTATAATTATCAACA+AGG + chr6_3:2111028-2111047 Msa0933580:intron 25.0%
! ATCATATTCAACTTCAACAA+AGG - chr6_3:2111059-2111078 None:intergenic 25.0%
! TTCAAATCTTTAATAACTGC+AGG - chr6_3:2111294-2111313 None:intergenic 25.0%
!!! TGAAATTTTGGAGATATAGA+GGG - chr6_3:2111448-2111467 None:intergenic 25.0%
!!! ATGAAATTTTGGAGATATAG+AGG - chr6_3:2111449-2111468 None:intergenic 25.0%
! TTGCTTGTATATGTTTATGA+GGG - chr6_3:2111472-2111491 None:intergenic 25.0%
! TTTGCTTGTATATGTTTATG+AGG - chr6_3:2111473-2111492 None:intergenic 25.0%
!! TTAAAAAGTATACATACCAC+CGG - chr6_3:2111661-2111680 None:intergenic 25.0%
!! CTTTTGTATCATAGTTCAAT+TGG - chr6_3:2110161-2110180 Msa0933590:intron 25.0%
! ACTATGATACAAAAGTTTCA+TGG + chr6_3:2111736-2111755 Msa0933580:intron 25.0%
! CTATGATACAAAAGTTTCAT+GGG + chr6_3:2111737-2111756 Msa0933580:intron 25.0%
! TAATATGCCCTACTTATATA+TGG - chr6_3:2111795-2111814 None:intergenic 25.0%
! ATTCACTTTCAATTGAATGT+TGG + chr6_3:2099997-2100016 Msa0933580:CDS 25.0%
! TTCACTTTCAATTGAATGTT+GGG + chr6_3:2099998-2100017 Msa0933580:CDS 25.0%
! TGTTTTGCAGTATTTGTGAA+TGG + chr6_3:2099646-2099665 Msa0933580:intron 30.0%
! TGTGAATGGAAAATTTTGCA+AGG + chr6_3:2099660-2099679 Msa0933580:CDS 30.0%
TAACCGTTAACGAGATATTA+GGG + chr6_3:2099770-2099789 Msa0933580:CDS 30.0%
TAACCCTAATATCTCGTTAA+CGG - chr6_3:2099776-2099795 Msa0933570:intron 30.0%
ATATTAGGGTTAAACACACT+TGG + chr6_3:2099784-2099803 Msa0933580:CDS 30.0%
! TTAGTACTTTTGTGATGAGA+CGG - chr6_3:2099942-2099961 Msa0933570:intron 30.0%
CATTCAATTGAAAGTGAATG+AGG - chr6_3:2105240-2105259 Msa0933590:CDS 30.0%
TTTCAATTGAATGTTGGGTA+TGG + chr6_3:2100003-2100022 Msa0933580:CDS 30.0%
ACTATTGCTAATGCTGTATT+TGG + chr6_3:2100075-2100094 Msa0933580:intron 30.0%
CTATTGCTAATGCTGTATTT+GGG + chr6_3:2100076-2100095 Msa0933580:intron 30.0%
! TCTTCAAAAACAATTTTGGG+TGG + chr6_3:2100167-2100186 Msa0933580:intron 30.0%
GAAACACAAATATAAGAGCA+AGG - chr6_3:2100320-2100339 Msa0933570:intron 30.0%
TGCTTATAATTTGAACCAGA+AGG - chr6_3:2100561-2100580 Msa0933570:intron 30.0%
! TTTTTGACCCATTAACTATG+AGG + chr6_3:2100625-2100644 Msa0933580:intron 30.0%
GTTTCTATCCTCATAGTTAA+TGG - chr6_3:2100636-2100655 Msa0933570:intron 30.0%
AAAGCTTCCTATGATATACT+TGG + chr6_3:2100722-2100741 Msa0933580:intron 30.0%
!!! TTTACTTTTTGTTGGTACGA+AGG + chr6_3:2100746-2100765 Msa0933580:intron 30.0%
!!! AGGACATACGACTTTTTTTT+GGG - chr6_3:2100782-2100801 Msa0933570:intron 30.0%
!!! TAGGACATACGACTTTTTTT+TGG - chr6_3:2100783-2100802 Msa0933570:intron 30.0%
GAATATAGTAATCTCGAGTT+AGG + chr6_3:2100931-2100950 Msa0933580:intron 30.0%
! CAAATCTCAAACAATCCTTT+TGG - chr6_3:2100979-2100998 Msa0933570:intron 30.0%
TCAAAACTTCATCATCTCTT+TGG + chr6_3:2101126-2101145 Msa0933580:intron 30.0%
!! CTATTGTTAAGGAGGTATTT+GGG - chr6_3:2101349-2101368 Msa0933570:CDS 30.0%
!! ACTATTGTTAAGGAGGTATT+TGG - chr6_3:2101350-2101369 Msa0933570:CDS 30.0%
AGTTATCACTATTGTTAAGG+AGG - chr6_3:2101357-2101376 Msa0933570:CDS 30.0%
ATTCACTTCCAACATAATGT+GGG - chr6_3:2101428-2101447 Msa0933570:CDS 30.0%
TATTCACTTCCAACATAATG+TGG - chr6_3:2101429-2101448 Msa0933570:CDS 30.0%
! TGAGAACTTTTGTAATGAGA+CGG + chr6_3:2101483-2101502 Msa0933580:intron 30.0%
!!! TTTGTAATGAGACGGTTTTT+TGG + chr6_3:2101491-2101510 Msa0933580:intron 30.0%
!!! TTGTAATGAGACGGTTTTTT+GGG + chr6_3:2101492-2101511 Msa0933580:intron 30.0%
CAACACTATAAGTATCTCAA+CGG + chr6_3:2101550-2101569 Msa0933580:intron 30.0%
ACTGTGAAAAAGAAATCTTC+TGG + chr6_3:2101722-2101741 Msa0933580:intron 30.0%
!!! TAATTTTCAGTGTTGGTGAA+CGG - chr6_3:2101779-2101798 Msa0933570:intron 30.0%
GATTGACATTCTTTACTTTG+AGG - chr6_3:2101932-2101951 Msa0933570:intron 30.0%
AGATATAACCAAAAGGTCAA+GGG - chr6_3:2102570-2102589 Msa0933570:intron 30.0%
TAGATATAACCAAAAGGTCA+AGG - chr6_3:2102571-2102590 Msa0933570:intron 30.0%
! TGGTTATATCTAAGATCAGA+TGG + chr6_3:2102579-2102598 Msa0933580:intron 30.0%
ATTAACGAAATCAAGACTTG+GGG - chr6_3:2102678-2102697 Msa0933570:CDS 30.0%
TGTACATGAATGTAAAAGAG+TGG - chr6_3:2103104-2103123 None:intergenic 30.0%
GAGTATGTAAAAGAGGAATT+AGG - chr6_3:2103224-2103243 None:intergenic 30.0%
TTGAATGTTATTGCATGAGA+TGG - chr6_3:2103300-2103319 None:intergenic 30.0%
TATAATATATGCAAGGTTCG+AGG - chr6_3:2103403-2103422 None:intergenic 30.0%
! TAATGATTGTGATTGGTTGA+TGG - chr6_3:2103755-2103774 None:intergenic 30.0%
CCAAAAATCTATCAAATGTG+GGG - chr6_3:2103976-2103995 None:intergenic 30.0%
!! TTCAAAAACTTGTTGTTCTC+TGG - chr6_3:2104074-2104093 None:intergenic 30.0%
CTCAAAGTTTACTACATTCA+GGG - chr6_3:2104490-2104509 None:intergenic 30.0%
TCTCAAAGTTTACTACATTC+AGG - chr6_3:2104491-2104510 None:intergenic 30.0%
! TCAACTAAGTTGCATTTTCA+AGG + chr6_3:2104729-2104748 Msa0933580:intron 30.0%
! TCTTCAAAAACAATTTTGGG+TGG - chr6_3:2100167-2100186 Msa0933570:intron 30.0%
!! AGAACTTCTGAAGAGATTTT+TGG + chr6_3:2105128-2105147 Msa0933580:intron 30.0%
ACTATTGCTAATGCTGTATT+TGG - chr6_3:2100075-2100094 Msa0933570:intron 30.0%
TTAGCAATAGTAATAACACC+TGG + chr6_3:2105170-2105189 Msa0933580:intron 30.0%
! TAGTAATAACACCTGGATTT+TGG + chr6_3:2105177-2105196 Msa0933580:intron 30.0%
TTCACTTTCAATTGAATGTG+GGG - chr6_3:2105238-2105257 Msa0933590:CDS 30.0%
CATTCACTTTCAATTGAATG+TGG - chr6_3:2099996-2100015 Msa0933570:intron 30.0%
CATTCAATTGAAAGTGAATG+AGG + chr6_3:2105240-2105259 Msa0933580:intron 30.0%
!! ATCACAAAAGTACTCAACAA+AGG - chr6_3:2112135-2112154 None:intergenic 30.0%
TACTGAGATTCTTATAGTGT+TGG - chr6_3:2105363-2105382 Msa0933590:CDS 30.0%
AGCAAATGATTTCTTCTACT+CGG - chr6_3:2105537-2105556 Msa0933590:CDS 30.0%
! TGTTTTGCAGTTTTTGTGAA+TGG - chr6_3:2105590-2105609 Msa0933590:intron 30.0%
CATAGTTCAATCAGTTTAAC+GGG + chr6_3:2105801-2105820 Msa0933580:intron 30.0%
TTGCTACTCATCTTATATGA+AGG + chr6_3:2105994-2106013 Msa0933580:intron 30.0%
TGCTACTCATCTTATATGAA+GGG + chr6_3:2105995-2106014 Msa0933580:intron 30.0%
! ATCTTCAATGTCGACATTTT+CGG + chr6_3:2106125-2106144 Msa0933580:intron 30.0%
TATGGTATCATCATGAAGTT+GGG - chr6_3:2106176-2106195 Msa0933590:intron 30.0%
ATATGGTATCATCATGAAGT+TGG - chr6_3:2106177-2106196 Msa0933590:intron 30.0%
CATAACATATTGCATGTTTG+GGG + chr6_3:2106355-2106374 Msa0933580:intron 30.0%
GCATCTTTGTAAAGAATTGA+TGG + chr6_3:2106391-2106410 Msa0933580:intron 30.0%
!!! AGTTAACTCATGTTGGTTTT+AGG - chr6_3:2106429-2106448 Msa0933590:intron 30.0%
GAACATGATTTAAGTCACAT+TGG + chr6_3:2106520-2106539 Msa0933580:intron 30.0%
ACATGATTTAAGTCACATTG+GGG + chr6_3:2106522-2106541 Msa0933580:intron 30.0%
!!! GTTATTTTTGTCAGTTCATG+TGG + chr6_3:2106544-2106563 Msa0933580:intron 30.0%
!! TATTTTTGTCAGTTCATGTG+GGG + chr6_3:2106546-2106565 Msa0933580:intron 30.0%
ACAAAATATGCCTATCGAAT+TGG - chr6_3:2106803-2106822 Msa0933590:intron 30.0%
TGAAGAGAATGGAAGAAAAT+AGG + chr6_3:2107168-2107187 Msa0933580:intron 30.0%
ATTGACTGTATTAATGACCT+AGG - chr6_3:2107254-2107273 Msa0933590:intron 30.0%
CTAATCCGGAAAATATATTC+CGG + chr6_3:2107436-2107455 Msa0933580:intron 30.0%
TCATTCCAGATTGTATATTC+CGG + chr6_3:2107470-2107489 Msa0933580:intron 30.0%
ATAAATGCAGTCAAAAAACG+TGG - chr6_3:2107568-2107587 Msa0933590:intron 30.0%
! GAGATTAGAAATAGGCTTTT+AGG + chr6_3:2107964-2107983 Msa0933580:intron 30.0%
GTTCTGCTAAAATACATATC+CGG + chr6_3:2108162-2108181 Msa0933580:intron 30.0%
! CATATCCGGATTTTATAATC+CGG + chr6_3:2108176-2108195 Msa0933580:intron 30.0%
! TAGTAATTTTCAGATGTCTC+CGG - chr6_3:2108198-2108217 Msa0933590:intron 30.0%
AATTATTGAATCTGTCGCAT+AGG + chr6_3:2108357-2108376 Msa0933580:intron 30.0%
TACACTGCATATTTCAAACT+TGG + chr6_3:2108400-2108419 Msa0933580:intron 30.0%
TTTCTCCGATGAATATGTAA+AGG + chr6_3:2108714-2108733 Msa0933580:intron 30.0%
TAGGTCCTTTACATATTCAT+CGG - chr6_3:2108722-2108741 Msa0933590:intron 30.0%
!! TTACTCTCTTTTGGTTAAGA+TGG - chr6_3:2108767-2108786 Msa0933590:intron 30.0%
ATGTTATTCTACAAGACACA+AGG - chr6_3:2108829-2108848 Msa0933590:intron 30.0%
!! TTAAATTTTGAGGAGAATGG+AGG + chr6_3:2108959-2108978 Msa0933580:intron 30.0%
CAATTGCTAATGCTGTATTT+GGG - chr6_3:2109644-2109663 Msa0933590:CDS 30.0%
ACAATTGCTAATGCTGTATT+TGG - chr6_3:2109645-2109664 Msa0933590:CDS 30.0%
TTTCAATTGAATGTTGGGTA+TGG - chr6_3:2100003-2100022 Msa0933570:intron 30.0%
TCCACTTTCAATTGAATGTT+GGG - chr6_3:2109722-2109741 Msa0933590:CDS 30.0%
ATCCACTTTCAATTGAATGT+TGG - chr6_3:2109723-2109742 Msa0933590:CDS 30.0%
!! ATCACAAAAGTACTCAACAA+AGG - chr6_3:2112135-2112154 None:intergenic 30.0%
TACTGAGATTCTTATAGTGT+TGG - chr6_3:2105363-2105382 Msa0933590:CDS 30.0%
GTTACTGTTAATGAGATACT+AGG - chr6_3:2109951-2109970 Msa0933590:CDS 30.0%
AGTATCTCATTAACAGTAAC+CGG + chr6_3:2109951-2109970 Msa0933580:intron 30.0%
AGCAAATGATTTCTTCTTCT+CGG - chr6_3:2110021-2110040 Msa0933590:CDS 30.0%
! TGTTTTGCAGTTTTTGTGAA+TGG - chr6_3:2105590-2105609 Msa0933590:intron 30.0%
ATTTATATATGTTGGACGTG+AGG + chr6_3:2110124-2110143 Msa0933580:intron 30.0%
ACTATGATACAAAAGTCTCA+CGG - chr6_3:2110156-2110175 Msa0933590:intron 30.0%
CATAGTTCAATCAGTTTAAC+GGG + chr6_3:2105801-2105820 Msa0933580:intron 30.0%
GATATTTCACAATGCAAACA+TGG + chr6_3:2110423-2110442 Msa0933580:intron 30.0%
!! TTTTGATTCCTTCTCATGAA+TGG + chr6_3:2110949-2110968 Msa0933580:intron 30.0%
TTTGATTCCTTCTCATGAAT+GGG + chr6_3:2110950-2110969 Msa0933580:intron 30.0%
!!! TAACTACGACTTTTTTTACC+AGG + chr6_3:2111355-2111374 Msa0933580:intron 30.0%
! GTTTATGAGGGATGAAATTT+TGG - chr6_3:2111460-2111479 None:intergenic 30.0%
!!! AAATGTTTTAGCAACTCTCT+TGG - chr6_3:2111504-2111523 None:intergenic 30.0%
!!! TTTTTTGCAGTGTTTGTGAA+TGG + chr6_3:2111835-2111854 Msa0933580:intron 30.0%
TAGTCCTAGTATCTCATTAA+CGG - chr6_3:2109944-2109963 Msa0933590:CDS 30.0%
!! ATCACAAAAGTACTCAACAA+AGG + chr6_3:2112135-2112154 Msa0933580:CDS 30.0%
CATTCAATTGAAAGTGAATG+AGG - chr6_3:2105240-2105259 Msa0933590:CDS 30.0%
TTTCAATTGAATGTTGGGTA+TGG + chr6_3:2100003-2100022 Msa0933580:CDS 30.0%
! TAGTAATAACACCTGGATTT+TGG - chr6_3:2105177-2105196 Msa0933590:CDS 30.0%
TTAGCAATAGTAATAACACC+TGG - chr6_3:2105170-2105189 Msa0933590:CDS 30.0%
ACTATTGCTAATGCTGTATT+TGG + chr6_3:2100075-2100094 Msa0933580:intron 30.0%
CTATTGCTAATGCTGTATTT+GGG + chr6_3:2100076-2100095 Msa0933580:intron 30.0%
ATTATCCACTTGAAAAGCTT+TGG - chr6_3:2112322-2112341 None:intergenic 30.0%
! TCTTCAAAAACAATTTTGGG+TGG + chr6_3:2100167-2100186 Msa0933580:intron 30.0%
AGTATACATACCACCATTCT+TGG - chr6_3:2105880-2105899 Msa0933590:intron 35.0%
GTAACCGTTAACGAGATATT+AGG + chr6_3:2099769-2099788 Msa0933580:CDS 35.0%
! TAAGAATTTCAGTGGCTCTA+GGG - chr6_3:2099867-2099886 Msa0933570:intron 35.0%
ATAAGAATTTCAGTGGCTCT+AGG - chr6_3:2099868-2099887 Msa0933570:intron 35.0%
GATGTGTTTGTGTTTCCAAT+TGG + chr6_3:2099970-2099989 Msa0933580:CDS 35.0%
! TAGTGATAACACCTGGATTT+TGG - chr6_3:2100059-2100078 Msa0933570:intron 35.0%
TTAGCAATAGTGATAACACC+TGG - chr6_3:2100066-2100085 Msa0933570:intron 35.0%
ACTAGAACATGATACTACCT+TGG + chr6_3:2100196-2100215 Msa0933580:intron 35.0%
AAATGTTAGTTGAGCTGGTT+TGG - chr6_3:2100880-2100899 Msa0933570:intron 35.0%
TAATCTCGAGTTAGGTTAGA+TGG + chr6_3:2100939-2100958 Msa0933580:intron 35.0%
ACAATCTTCAGAAGCAATTC+TGG - chr6_3:2101265-2101284 Msa0933570:intron 35.0%
! CTTCTGAAGATTGTCAACTA+TGG + chr6_3:2101271-2101290 Msa0933580:intron 35.0%
TTCACTTCCAACATAATGTG+GGG - chr6_3:2101427-2101446 Msa0933570:CDS 35.0%
TGGAAGTGAATAAGACCAAT+TGG + chr6_3:2101437-2101456 Msa0933580:intron 35.0%
GATGTCTTTGTGTTTCCAAT+TGG - chr6_3:2101455-2101474 Msa0933570:CDS 35.0%
! GAGATACTTATAGTGTTGGA+GGG - chr6_3:2101548-2101567 Msa0933570:intron 35.0%
! TGAGATACTTATAGTGTTGG+AGG - chr6_3:2101549-2101568 Msa0933570:intron 35.0%
CGTTGAGATACTTATAGTGT+TGG - chr6_3:2101552-2101571 Msa0933570:intron 35.0%
ACCTAATATCTCACTATCTG+TGG + chr6_3:2101652-2101671 Msa0933580:intron 35.0%
CCTAATATCTCACTATCTGT+GGG + chr6_3:2101653-2101672 Msa0933580:intron 35.0%
GAAAACATATCAAGTCCACT+TGG - chr6_3:2101695-2101714 Msa0933570:CDS 35.0%
! TCTTCTGGTGTAACAAGTTT+TGG + chr6_3:2101737-2101756 Msa0933580:intron 35.0%
TACAATGGATGTGAAGTGTA+AGG + chr6_3:2101830-2101849 Msa0933580:intron 35.0%
ACAATGGATGTGAAGTGTAA+GGG + chr6_3:2101831-2101850 Msa0933580:intron 35.0%
TGTAAGGGTGGATAATTGTA+AGG + chr6_3:2101862-2101881 Msa0933580:intron 35.0%
GTAAGGGTGGATAATTGTAA+GGG + chr6_3:2101863-2101882 Msa0933580:intron 35.0%
TTGACCTTTGGCAAATTCTA+TGG + chr6_3:2102153-2102172 Msa0933580:intron 35.0%
TGTACCATAGAATTTGCCAA+AGG - chr6_3:2102160-2102179 Msa0933570:intron 35.0%
CCGGTACACTCAAATATATT+GGG - chr6_3:2102183-2102202 Msa0933570:intron 35.0%
CCCAATATATTTGAGTGTAC+CGG + chr6_3:2102180-2102199 Msa0933580:intron 35.0%
ACCGGTACACTCAAATATAT+TGG - chr6_3:2102184-2102203 Msa0933570:intron 35.0%
! AAATTATGAAGCGAGAGTAC+CGG + chr6_3:2102511-2102530 Msa0933580:intron 35.0%
! AGAGGAATTAGGGTTGATTA+GGG - chr6_3:2103213-2103232 None:intergenic 35.0%
! AAGAGGAATTAGGGTTGATT+AGG - chr6_3:2103214-2103233 None:intergenic 35.0%
ACTCATAATCATATCTAGGG+AGG + chr6_3:2103240-2103259 Msa0933580:intron 35.0%
CTCATAATCATATCTAGGGA+GGG + chr6_3:2103241-2103260 Msa0933580:intron 35.0%
ATGTTATTGCATGAGATGGT+GGG - chr6_3:2103296-2103315 None:intergenic 35.0%
AATGTTATTGCATGAGATGG+TGG - chr6_3:2103297-2103316 None:intergenic 35.0%
!!! TTATATTTTTTGGTGGTGGC+CGG + chr6_3:2103369-2103388 Msa0933580:intron 35.0%
!!! TTTTTTTTTTGTGGTGGCAG+AGG - chr6_3:2103631-2103650 None:intergenic 35.0%
! CCCCACATTTGATAGATTTT+TGG + chr6_3:2103973-2103992 Msa0933580:intron 35.0%
! ATGATAACGAAAGACTCTTC+TGG - chr6_3:2104134-2104153 None:intergenic 35.0%
TCAAGTGGACAATAACATAG+TGG - chr6_3:2105096-2105115 Msa0933590:CDS 35.0%
ATTGTCCACTTGAAAAGCTT+TGG + chr6_3:2105103-2105122 Msa0933580:intron 35.0%
TTTCAATTGAATGTGGGGTA+TGG - chr6_3:2105233-2105252 Msa0933590:CDS 35.0%
! TTTGTGATGAGACTGTTTTC+TGG + chr6_3:2105302-2105321 Msa0933580:intron 35.0%
! GAGATTCTTATAGTGTTGGA+GGG - chr6_3:2112066-2112085 None:intergenic 35.0%
! TGAGATTCTTATAGTGTTGG+AGG - chr6_3:2112065-2112084 None:intergenic 35.0%
ATAAGAATCTCAGTAGCTCT+AGG + chr6_3:2105368-2105387 Msa0933580:intron 35.0%
! TAAGAATCTCAGTAGCTCTA+GGG + chr6_3:2105369-2105388 Msa0933580:intron 35.0%
!! TCGTATTGACTTTGCATCTA+GGG - chr6_3:2112008-2112027 None:intergenic 35.0%
!! ATTCTAGGACTAAACACTCT+AGG - chr6_3:2105452-2105471 Msa0933590:CDS 35.0%
GGAAATACATCAAATCCACT+TGG - chr6_3:2111919-2111938 None:intergenic 35.0%
CTATGATGCAAAAGTCTCAT+GGG - chr6_3:2105786-2105805 Msa0933590:intron 35.0%
ACTATGATGCAAAAGTCTCA+TGG - chr6_3:2105787-2105806 Msa0933590:intron 35.0%
AGTATACATACCACCATTCT+TGG + chr6_3:2105880-2105899 Msa0933580:intron 35.0%
CAACATGAGTTAACTCATGT+TGG - chr6_3:2106434-2106453 Msa0933590:intron 35.0%
CAACATGAGTTAACTCATGT+TGG + chr6_3:2106434-2106453 Msa0933580:intron 35.0%
GAACATGAGTTAAGTCACAT+AGG - chr6_3:2106467-2106486 Msa0933590:intron 35.0%
! ATTTTTGTCAGTTCATGTGG+GGG + chr6_3:2106547-2106566 Msa0933580:intron 35.0%
! GGAGAATAGCAGTTTTCATT+AGG + chr6_3:2106587-2106606 Msa0933580:intron 35.0%
GAAACTCTAACAATCTTGTC+CGG - chr6_3:2106762-2106781 Msa0933590:intron 35.0%
GACAAGATTGTTAGAGTTTC+CGG + chr6_3:2106762-2106781 Msa0933580:intron 35.0%
AGTTTCCGGATTATACAATC+CGG + chr6_3:2106776-2106795 Msa0933580:intron 35.0%
!! AATTGCTTTTCAGCTTATGC+GGG - chr6_3:2106870-2106889 Msa0933590:intron 35.0%
!! CAATTGCTTTTCAGCTTATG+CGG - chr6_3:2106871-2106890 Msa0933590:intron 35.0%
ATAAGCTGAAAAGCAATTGC+AGG + chr6_3:2106872-2106891 Msa0933580:intron 35.0%
TAAGCTGAAAAGCAATTGCA+GGG + chr6_3:2106873-2106892 Msa0933580:intron 35.0%
CGACGAAAATTGAAGAAAAG+TGG + chr6_3:2106957-2106976 Msa0933580:intron 35.0%
! ACAAAAAAGCGTATAGCATC+TGG - chr6_3:2107013-2107032 Msa0933590:intron 35.0%
GTGTCTTTCTTTGATGTCAA+AGG + chr6_3:2106821-2106840 Msa0933580:intron 35.0%
!!! AAGTTTTGTAGGAGTGTTTG+TGG - chr6_3:2107140-2107159 Msa0933590:intron 35.0%
ATAGGTGAAGTGAAGAATGA+TGG + chr6_3:2107186-2107205 Msa0933580:intron 35.0%
! ATGATGGTGTTTGTTGAAGA+TGG + chr6_3:2107202-2107221 Msa0933580:intron 35.0%
! TATAGCCTTAAACAAGTCCT+AGG + chr6_3:2107234-2107253 Msa0933580:intron 35.0%
! AATGACCTAGGACTTGTTTA+AGG - chr6_3:2107242-2107261 Msa0933590:intron 35.0%
AGTCAATGAAAACGTGTTAG+TGG + chr6_3:2107267-2107286 Msa0933580:intron 35.0%
AACGTTTGCACTTCTTTGTA+GGG - chr6_3:2107383-2107402 Msa0933590:intron 35.0%
TGGAATGATCCATCAAATTC+CGG - chr6_3:2107458-2107477 Msa0933590:intron 35.0%
!! GGTTTGGAAGGGTATTTATA+GGG - chr6_3:2107620-2107639 Msa0933590:intron 35.0%
ACTTTCAGGGTTTGTATGAA+CGG + chr6_3:2107735-2107754 Msa0933580:intron 35.0%
GCTCTTAGGAGATTAGAATT+AGG + chr6_3:2107934-2107953 Msa0933580:intron 35.0%
GAGATTAGAATTAGGCTCTT+AGG + chr6_3:2107942-2107961 Msa0933580:intron 35.0%
GCTCTTAGGAGATTAGAAAT+AGG + chr6_3:2107956-2107975 Msa0933580:intron 35.0%
TGTCTCCGGATTATAAAATC+CGG - chr6_3:2108184-2108203 Msa0933590:intron 35.0%
! GTTTTTCGTAGTTAGGCAAT+TGG - chr6_3:2108483-2108502 Msa0933590:intron 35.0%
AAAGGACCTACATGATTTGA+TGG + chr6_3:2108732-2108751 Msa0933580:intron 35.0%
AAGGACCTACATGATTTGAT+GGG + chr6_3:2108733-2108752 Msa0933580:intron 35.0%
TGAAACCCATCAAATCATGT+AGG - chr6_3:2108741-2108760 Msa0933590:intron 35.0%
CTGGAAATAATATTGAGTGG+TGG + chr6_3:2108921-2108940 Msa0933580:intron 35.0%
!! GAGGAGAAAAAGTACTAGAT+GGG + chr6_3:2108978-2108997 Msa0933580:intron 35.0%
TCTTCAAAAACAATTCTGGG+TGG - chr6_3:2109553-2109572 Msa0933590:intron 35.0%
TTAGCAATTGTGATTACACC+TGG + chr6_3:2109654-2109673 Msa0933580:intron 35.0%
! TTGTGATTACACCTGGATTT+TGG + chr6_3:2109661-2109680 Msa0933580:intron 35.0%
ACCCAACATTCAATTGAAAG+TGG + chr6_3:2109718-2109737 Msa0933580:intron 35.0%
! TGAGTACTTTTGTGATGAGA+CGG + chr6_3:2105294-2105313 Msa0933580:intron 35.0%
! GAGATTCTTATAGTGTTGGA+AGG - chr6_3:2112066-2112085 None:intergenic 35.0%
ATAAGAATCTCAGTAGCTCT+AGG + chr6_3:2105368-2105387 Msa0933580:intron 35.0%
! TAAGAATCTCAGTAGCTCTA+GGG + chr6_3:2105369-2105388 Msa0933580:intron 35.0%
!! TCGTATTGACTTTGCATCTA+GGG - chr6_3:2112008-2112027 None:intergenic 35.0%
ATACTAGGACTAAACACTCA+AGG - chr6_3:2109936-2109955 Msa0933590:CDS 35.0%
GGAAATACATCAAATCCACT+TGG - chr6_3:2111919-2111938 None:intergenic 35.0%
CTATGATACAAAAGTCTCAC+GGG - chr6_3:2110155-2110174 Msa0933590:intron 35.0%
ATCAATGACACAAAGAATGG+TGG - chr6_3:2110250-2110269 Msa0933590:intron 35.0%
GCTATCAATGACACAAAGAA+TGG - chr6_3:2110253-2110272 Msa0933590:intron 35.0%
! CCACACAAAAGTCTTGTAAA+GGG + chr6_3:2110272-2110291 Msa0933580:intron 35.0%
TTGCTTGTATATGGTTATGC+AGG + chr6_3:2110395-2110414 Msa0933580:intron 35.0%
TGAGTGAGTCAATTTGATCT+TGG - chr6_3:2110618-2110637 Msa0933590:intron 35.0%
! AACATAAGGGGTTTTTGTCT+TGG - chr6_3:2111099-2111118 None:intergenic 35.0%
AAAATTCAACAGGTAACGTG+TGG + chr6_3:2111233-2111252 Msa0933580:intron 35.0%
AAATTCAACAGGTAACGTGT+GGG + chr6_3:2111234-2111253 Msa0933580:intron 35.0%
ACAAGATGTCAATGCTATGA+AGG - chr6_3:2105958-2105977 Msa0933590:intron 35.0%
! CATAGTTCAATTGGTTCAAC+AGG - chr6_3:2111722-2111741 None:intergenic 35.0%
GGCAAATGATTTCTTCTACT+CGG + chr6_3:2111888-2111907 Msa0933580:CDS 35.0%
GGAAATACATCAAATCCACT+TGG + chr6_3:2111919-2111938 Msa0933580:CDS 35.0%
AGTATCTCATTAACGGTAAC+CGG - chr6_3:2111958-2111977 None:intergenic 35.0%
GTTACCGTTAATGAGATACT+AGG + chr6_3:2111958-2111977 Msa0933580:CDS 35.0%
ATACTAGGACTAAACACTCT+AGG + chr6_3:2111973-2111992 Msa0933580:CDS 35.0%
!! TCGTATTGACTTTGCATCTA+GGG + chr6_3:2112008-2112027 Msa0933580:CDS 35.0%
CAACACTATAAGAATCTCAG+TGG - chr6_3:2105361-2105380 Msa0933590:CDS 35.0%
CACTGAGATTCTTATAGTGT+TGG + chr6_3:2112062-2112081 Msa0933580:CDS 35.0%
! TGAGATTCTTATAGTGTTGG+AGG + chr6_3:2112065-2112084 Msa0933580:CDS 35.0%
! GAGATTCTTATAGTGTTGGA+GGG + chr6_3:2112066-2112085 Msa0933580:CDS 35.0%
! TGAGTACTTTTGTGATGAGA+CGG - chr6_3:2105294-2105313 Msa0933590:CDS 35.0%
! AGAACTTCTGAAGAGATCTT+TGG - chr6_3:2112297-2112316 None:intergenic 35.0%
ACAAGATGCTAAAGCCAAGA+AGG - chr6_3:2099398-2099417 Msa0933570:intron 40.0%
! CCACACAAAAGTCTTGTAGA+GGG - chr6_3:2105915-2105934 Msa0933590:intron 40.0%
GCTATCAATGACACCAAGAA+TGG + chr6_3:2099460-2099479 Msa0933580:CDS 40.0%
ATCAATGACACCAAGAATGG+TGG + chr6_3:2099463-2099482 Msa0933580:CDS 40.0%
!! TCATTTGGTGTAGCAAGCTT+TGG - chr6_3:2099688-2099707 Msa0933570:intron 40.0%
!!! TGTGTCACTTTTGAACCAAG+TGG - chr6_3:2099748-2099767 Msa0933570:intron 40.0%
! TTGGAGGGTACACTTTATGT+CGG + chr6_3:2099892-2099911 Msa0933580:intron 40.0%
! TTTGTGATGAGACGGTTTTC+TGG - chr6_3:2109786-2109805 Msa0933590:CDS 40.0%
TGAAAGTGAATGAGGCCAAT+TGG - chr6_3:2105248-2105267 Msa0933590:CDS 40.0%
ATTGTCCACTTGGAAAGCTT+TGG - chr6_3:2109587-2109606 Msa0933590:intron 40.0%
CCACTATGTTATTGTCCACT+TGG - chr6_3:2105093-2105112 Msa0933590:CDS 40.0%
CCAAGTGGACAATAACATAG+TGG + chr6_3:2100140-2100159 Msa0933580:intron 40.0%
! ATTTTGGATGTAGTTCTCGC+TGG + chr6_3:2100442-2100461 Msa0933580:intron 40.0%
TCTTCAGAAGCAATTCTGGT+TGG - chr6_3:2101261-2101280 Msa0933570:intron 40.0%
TTCTTCAGAAGTTCTCACCA+AGG - chr6_3:2100113-2100132 Msa0933570:intron 40.0%
TGAATTATGGCTGTTAAGCC+CGG + chr6_3:2101379-2101398 Msa0933580:intron 40.0%
TCACTTCCAACATAATGTGG+GGG - chr6_3:2101426-2101445 Msa0933570:CDS 40.0%
ATAAGTATCTCAACGGCTCT+AGG + chr6_3:2101557-2101576 Msa0933580:intron 40.0%
!! CGTATTGACTTTGCACCTAA+GGG - chr6_3:2101605-2101624 Msa0933570:CDS 40.0%
!! TCGTATTGACTTTGCACCTA+AGG - chr6_3:2101606-2101625 Msa0933570:CDS 40.0%
CCCACAGATAGTGAGATATT+AGG - chr6_3:2101656-2101675 Msa0933570:CDS 40.0%
TGTAAGGGTGGATAACTGTA+AGG + chr6_3:2101846-2101865 Msa0933580:intron 40.0%
GTAAGGGTGGATAACTGTAA+GGG + chr6_3:2101847-2101866 Msa0933580:intron 40.0%
AAAGGTCAAGGGAACTTCTA+CGG - chr6_3:2102559-2102578 Msa0933570:intron 40.0%
! TAGAAGTTCCCTTGACCTTT+TGG + chr6_3:2102559-2102578 Msa0933580:intron 40.0%
ATCACACAAAAGTCTTGCAG+AGG + chr6_3:2102699-2102718 Msa0933580:intron 40.0%
ACAAAAGTCTTGCAGAGGAT+TGG + chr6_3:2102704-2102723 Msa0933580:intron 40.0%
CAAAAGTCTTGCAGAGGATT+GGG + chr6_3:2102705-2102724 Msa0933580:intron 40.0%
TGTTATTGCATGAGATGGTG+GGG - chr6_3:2103295-2103314 None:intergenic 40.0%
!!! TATATTTTTTGGTGGTGGCC+GGG + chr6_3:2103370-2103389 Msa0933580:intron 40.0%
! TTAGCTTAGCTCAGTTGGTA+GGG - chr6_3:2103432-2103451 None:intergenic 40.0%
ACAACGCATGGTAATATGCA+AGG + chr6_3:2103592-2103611 Msa0933580:intron 40.0%
GCATGGTAATATGCAAGGTT+CGG + chr6_3:2103597-2103616 Msa0933580:intron 40.0%
CATGGTAATATGCAAGGTTC+GGG + chr6_3:2103598-2103617 Msa0933580:intron 40.0%
ATGGTAATATGCAAGGTTCG+GGG + chr6_3:2103599-2103618 Msa0933580:intron 40.0%
!! AAAACTTGTTGTTCTCTGGC+AGG - chr6_3:2104070-2104089 None:intergenic 40.0%
ATAACGAAAGACTCTTCTGG+TGG - chr6_3:2104131-2104150 None:intergenic 40.0%
GAAAACCAATCGCTGAATCA+GGG - chr6_3:2104174-2104193 None:intergenic 40.0%
TAACCTTTGATCACGACGTT+CGG + chr6_3:2104321-2104340 Msa0933580:intron 40.0%
! CGTTTTTATACTTGTAGGGC+TGG - chr6_3:2104574-2104593 None:intergenic 40.0%
GAGTGAATGTGTGCAATTGA+TGG - chr6_3:2104705-2104724 None:intergenic 40.0%
!! TCTCACCAAAGCTTTTCAAG+TGG - chr6_3:2105111-2105130 Msa0933590:CDS 40.0%
TGAAAGTGAATGAGGCCAAT+TGG + chr6_3:2105248-2105267 Msa0933580:intron 40.0%
GATGTCTTCGTGTTTCCAAT+TGG - chr6_3:2112159-2112178 None:intergenic 40.0%
!! TTGGAGGGTACTCTTTATGT+CGG - chr6_3:2105344-2105363 Msa0933590:CDS 40.0%
!! CGTATTGACTTTGCATCTAG+GGG - chr6_3:2112009-2112028 None:intergenic 40.0%
!! CTCGTATTGACTTTGCATCT+AGG - chr6_3:2112007-2112026 None:intergenic 40.0%
ACTTGGTTCAAAAGTGACAC+CGG - chr6_3:2099747-2099766 Msa0933570:intron 40.0%
! TTCTTCTACTCGGTGAAAGA+AGG - chr6_3:2111898-2111917 None:intergenic 40.0%
TGTGAATGGCAAATTCTGCA+AGG - chr6_3:2111849-2111868 None:intergenic 40.0%
ATCAATGACACCAAGAATGG+TGG - chr6_3:2099463-2099482 Msa0933570:intron 40.0%
GCTATCAATGACACCAAGAA+TGG - chr6_3:2099460-2099479 Msa0933570:intron 40.0%
! CCACACAAAAGTCTTGTAGA+GGG + chr6_3:2105915-2105934 Msa0933580:intron 40.0%
! TTTTTGTCAGTTCATGTGGG+GGG + chr6_3:2106548-2106567 Msa0933580:intron 40.0%
TAGGCACAAGTAAAACCCAT+AGG + chr6_3:2106606-2106625 Msa0933580:intron 40.0%
! ATTTCATGGTTTGGGCCTAT+GGG - chr6_3:2106624-2106643 Msa0933590:intron 40.0%
TGAGTTTATTTGTGTGAGCC+CGG - chr6_3:2106655-2106674 Msa0933590:intron 40.0%
!! GTATTACTTTTCCCACCCTA+TGG + chr6_3:2106680-2106699 Msa0933580:intron 40.0%
TTCCAAAAATACCTCTGGTC+CGG + chr6_3:2106726-2106745 Msa0933580:intron 40.0%
CTTGTCCGGAAAATGTAATC+CGG - chr6_3:2106748-2106767 Msa0933590:intron 40.0%
TTGGTCCGGATTGTATAATC+CGG - chr6_3:2106784-2106803 Msa0933590:intron 40.0%
ATATGCCTATCGAATTGGTC+CGG - chr6_3:2106798-2106817 Msa0933590:intron 40.0%
!! ATTGCTTTTCAGCTTATGCG+GGG - chr6_3:2106869-2106888 Msa0933590:intron 40.0%
AAGCTGAAAAGCAATTGCAG+GGG + chr6_3:2106874-2106893 Msa0933580:intron 40.0%
! TTACGAGATTTGTGGTGTCA+TGG - chr6_3:2106922-2106941 Msa0933590:intron 40.0%
AAAAGTGGTGAAGTGTGTTC+CGG + chr6_3:2106972-2106991 Msa0933580:intron 40.0%
CTTGTGTGGGGTTCATATAA+CGG - chr6_3:2107067-2107086 Msa0933590:intron 40.0%
AATTGCATTGCAGCTTGTGT+GGG - chr6_3:2107080-2107099 Msa0933590:intron 40.0%
AATGCAATTGCAGGGTTCAT+AGG + chr6_3:2107091-2107110 Msa0933580:intron 40.0%
AATTGCAGGGTTCATAGGAA+CGG + chr6_3:2107096-2107115 Msa0933580:intron 40.0%
!! GAAAGAGTGCCATCAATTAG+TGG - chr6_3:2107307-2107326 Msa0933590:intron 40.0%
ACATTCCGGATTGTATAACC+CGG - chr6_3:2107354-2107373 Msa0933590:intron 40.0%
GAACGTTTGCACTTCTTTGT+AGG - chr6_3:2107384-2107403 Msa0933590:intron 40.0%
!! TTTCCGGATTAGTGCGATTA+TGG - chr6_3:2107428-2107447 Msa0933590:intron 40.0%
ACCACAGTAAAAAACGTGTG+TGG - chr6_3:2107525-2107544 Msa0933590:intron 40.0%
!! TGGAAGGGTATTTATAGGGA+GGG - chr6_3:2107616-2107635 Msa0933590:intron 40.0%
!! TTGGAAGGGTATTTATAGGG+AGG - chr6_3:2107617-2107636 Msa0933590:intron 40.0%
!! GGGTTTGGAAGGGTATTTAT+AGG - chr6_3:2107621-2107640 Msa0933590:intron 40.0%
ATGGTTGTAGAAGGAAGAAG+AGG - chr6_3:2107671-2107690 Msa0933590:intron 40.0%
TCTTCTTCCTTCTACAACCA+TGG + chr6_3:2107670-2107689 Msa0933580:intron 40.0%
TGGAAAACCATGGTTGTAGA+AGG - chr6_3:2107680-2107699 Msa0933590:intron 40.0%
TATCTATGAAAGGCCAACGA+TGG - chr6_3:2107700-2107719 Msa0933590:intron 40.0%
!! TCGTTGGCCTTTCATAGATA+AGG + chr6_3:2107700-2107719 Msa0933580:intron 40.0%
!! CGTTGGCCTTTCATAGATAA+GGG + chr6_3:2107701-2107720 Msa0933580:intron 40.0%
! AACCCTGAAAGTTTTCAACG+AGG - chr6_3:2107727-2107746 Msa0933590:intron 40.0%
GTTTGTATGAACGGTCAATG+AGG + chr6_3:2107744-2107763 Msa0933580:intron 40.0%
CATAGCAGTAACTTGGCTAT+TGG - chr6_3:2107891-2107910 Msa0933590:intron 40.0%
AAATTCCGGATTACGGAATC+CGG + chr6_3:2108223-2108242 Msa0933580:intron 40.0%
! TTCCAATTTTACCCCTTGTC+CGG - chr6_3:2108245-2108264 Msa0933590:intron 40.0%
!! GTATTACTTTTCCCACCCTA+TGG - chr6_3:2106680-2106699 Msa0933590:intron 40.0%
AATTGGCTACATAGTGACGT+TGG - chr6_3:2108466-2108485 Msa0933590:intron 40.0%
!! GGAGGAGAAAAAGTACTAGA+TGG + chr6_3:2108977-2108996 Msa0933580:intron 40.0%
ACAAAGCATAGAGGATACAG+CGG - chr6_3:2109055-2109074 Msa0933590:intron 40.0%
CCAAGTGGACAATAACATAG+TGG - chr6_3:2100140-2100159 Msa0933570:intron 40.0%
CCACTATGTTATTGTCCACT+TGG + chr6_3:2105093-2105112 Msa0933580:intron 40.0%
ATTGTCCACTTGGAAAGCTT+TGG + chr6_3:2109587-2109606 Msa0933580:intron 40.0%
TCTAACCAAAGCTTTCCAAG+TGG - chr6_3:2109595-2109614 Msa0933590:intron 40.0%
GAATGTTGGGTATGGAAATG+CGG - chr6_3:2100011-2100030 Msa0933570:intron 40.0%
TGAAAGTGGATGAGACCAAT+TGG + chr6_3:2109732-2109751 Msa0933580:intron 40.0%
GACGTGTTTGTGTTTCCAAT+TGG - chr6_3:2109750-2109769 Msa0933590:CDS 40.0%
! TTTGTGATGAGACGGTTTTC+TGG + chr6_3:2109786-2109805 Msa0933580:intron 40.0%
!! TTGGAAGGTACTCTCTATGT+CGG - chr6_3:2109828-2109847 Msa0933590:intron 40.0%
!! CGTATTGACTTTGCATCTAG+GGG - chr6_3:2112009-2112028 None:intergenic 40.0%
!! CTCGTATTGACTTTGCATCT+AGG - chr6_3:2112007-2112026 None:intergenic 40.0%
ACTTGGTTCAAAAGTGACAC+CGG - chr6_3:2099747-2099766 Msa0933570:intron 40.0%
TTCTTCTTCTCGGTGAAAGA+AGG - chr6_3:2110011-2110030 Msa0933590:CDS 40.0%
!! TCATTTGCTGTAGCAAGCTT+TGG + chr6_3:2105548-2105567 Msa0933580:intron 40.0%
TGTGAATGGCAAATTCTGCA+AGG - chr6_3:2111849-2111868 None:intergenic 40.0%
! GCCACACAAAAGTCTTGTAA+AGG + chr6_3:2110271-2110290 Msa0933580:intron 40.0%
! CCCTTTACAAGACTTTTGTG+TGG - chr6_3:2110275-2110294 Msa0933590:intron 40.0%
! ACAAAAGTCTTGTAAAGGGC+TGG + chr6_3:2110276-2110295 Msa0933580:intron 40.0%
! CAAAAGTCTTGTAAAGGGCT+GGG + chr6_3:2110277-2110296 Msa0933580:intron 40.0%
ACATGATGCTAAAGCCAAGA+AGG + chr6_3:2110315-2110334 Msa0933580:intron 40.0%
TATGTTCCCATTCTTTGGCA+TGG + chr6_3:2110665-2110684 Msa0933580:intron 40.0%
ACAAGACCATGCCAAAGAAT+GGG - chr6_3:2110674-2110693 None:intergenic 40.0%
TACAAGACCATGCCAAAGAA+TGG - chr6_3:2110675-2110694 None:intergenic 40.0%
GAAGTTTCCCATTCATGAGA+AGG - chr6_3:2110960-2110979 None:intergenic 40.0%
! CCACACAAAAGTCTTGTAGA+GGG - chr6_3:2105915-2105934 Msa0933590:intron 40.0%
TGTGAATGGCAAATTCTGCA+AGG + chr6_3:2111849-2111868 Msa0933580:CDS 40.0%
! TTCTTCTACTCGGTGAAAGA+AGG + chr6_3:2111898-2111917 Msa0933580:CDS 40.0%
ACTTGGTTCAAAAGTGACAC+CGG + chr6_3:2099747-2099766 Msa0933580:CDS 40.0%
!! CTCGTATTGACTTTGCATCT+AGG + chr6_3:2112007-2112026 Msa0933580:CDS 40.0%
!! CGTATTGACTTTGCATCTAG+GGG + chr6_3:2112009-2112028 Msa0933580:CDS 40.0%
! TAAGAATCTCAGTGGCTCTA+GGG - chr6_3:2112056-2112075 None:intergenic 40.0%
ATAAGAATCTCAGTGGCTCT+AGG - chr6_3:2112057-2112076 None:intergenic 40.0%
! TTTGTGATGAGACGGTTTTC+TGG - chr6_3:2109786-2109805 Msa0933590:CDS 40.0%
GATGTCTTCGTGTTTCCAAT+TGG + chr6_3:2112159-2112178 Msa0933580:CDS 40.0%
TGAAAGTGAATGAGGCCAAT+TGG - chr6_3:2105248-2105267 Msa0933590:CDS 40.0%
CTTGTTTGTGACAGCCTTCT+TGG + chr6_3:2099381-2099400 Msa0933580:CDS 45.0%
! CAAAAGTCTTGTAGAGGGCT+GGG - chr6_3:2105920-2105939 Msa0933590:intron 45.0%
! ACAAAAGTCTTGTAGAGGGC+TGG - chr6_3:2105919-2105938 Msa0933590:intron 45.0%
! CCCTCTACAAGACTTTTGTG+TGG + chr6_3:2099438-2099457 Msa0933580:CDS 45.0%
! GCCACACAAAAGTCTTGTAG+AGG - chr6_3:2105914-2105933 Msa0933590:intron 45.0%
GGAAACACGTCAAATCCACT+TGG + chr6_3:2099730-2099749 Msa0933580:CDS 45.0%
!! TCGCGTTGACTTTGCATCTA+GGG + chr6_3:2099819-2099838 Msa0933580:CDS 45.0%
! TGGAGGGTACACTTTATGTC+GGG + chr6_3:2099893-2099912 Msa0933580:intron 45.0%
TCTCACCAAAGCTTTCCAAG+TGG + chr6_3:2100125-2100144 Msa0933580:intron 45.0%
ATTGTCCACTTGAAGAGCCT+TGG + chr6_3:2101295-2101314 Msa0933580:intron 45.0%
TTCCATCCCCCACATTATGT+TGG + chr6_3:2101417-2101436 Msa0933580:intron 45.0%
TTCCAACATAATGTGGGGGA+TGG - chr6_3:2101422-2101441 Msa0933570:CDS 45.0%
!! TTGGAGGGTACTCTCAATGT+TGG - chr6_3:2101533-2101552 Msa0933570:intron 45.0%
TGTGGAGGATTTAGACCCTT+AGG + chr6_3:2101587-2101606 Msa0933580:intron 45.0%
!! AGTGTCACTTGCAAACCAAG+TGG + chr6_3:2101677-2101696 Msa0933580:intron 45.0%
ATGGATGTGAAGTGTAAGGG+TGG + chr6_3:2101834-2101853 Msa0933580:intron 45.0%
AGGGTGGATAATTGTAAGGG+TGG + chr6_3:2101866-2101885 Msa0933580:intron 45.0%
ACTCACAAAGTGAGGTGTAC+CGG - chr6_3:2102533-2102552 Msa0933570:intron 45.0%
TACGGTACACTCACAAAGTG+AGG - chr6_3:2102541-2102560 Msa0933570:intron 45.0%
! GTTATTGCATGAGATGGTGG+GGG - chr6_3:2103294-2103313 None:intergenic 45.0%
AAGGTTCGAGGTTCAAATCC+CGG - chr6_3:2103391-2103410 None:intergenic 45.0%
CTTAGCTTAGCTCAGTTGGT+AGG - chr6_3:2103433-2103452 None:intergenic 45.0%
CTACCAACTGAGCTAAGCTA+AGG + chr6_3:2103431-2103450 Msa0933580:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG + chr6_3:2103569-2103588 Msa0933580:intron 45.0%
TGAAACCCTGATTCAGCGAT+TGG + chr6_3:2104166-2104185 Msa0933580:intron 45.0%
GGAAAACCAATCGCTGAATC+AGG - chr6_3:2104175-2104194 None:intergenic 45.0%
! TGTGTGCAATTGATGGTCGT+AGG - chr6_3:2104698-2104717 None:intergenic 45.0%
!! TGGAGGGTACTCTTTATGTC+GGG - chr6_3:2105343-2105362 Msa0933590:CDS 45.0%
!!! GGTGTCACTTTTGAACCAAG+TGG + chr6_3:2105488-2105507 Msa0933580:intron 45.0%
! GCCACACAAAAGTCTTGTAG+AGG + chr6_3:2105914-2105933 Msa0933580:intron 45.0%
! CCCTCTACAAGACTTTTGTG+TGG - chr6_3:2099438-2099457 Msa0933570:intron 45.0%
! ACAAAAGTCTTGTAGAGGGC+TGG + chr6_3:2105919-2105938 Msa0933580:intron 45.0%
! CAAAAGTCTTGTAGAGGGCT+GGG + chr6_3:2105920-2105939 Msa0933580:intron 45.0%
! GGGGGTGAGCAATTTTGTAT+AGG + chr6_3:2106566-2106585 Msa0933580:intron 45.0%
! GATTTCATGGTTTGGGCCTA+TGG - chr6_3:2106625-2106644 Msa0933590:intron 45.0%
GGGGCTTGATTTCATGGTTT+GGG - chr6_3:2106632-2106651 Msa0933590:intron 45.0%
AGTTTATTTGTGTGAGCCCG+GGG - chr6_3:2106653-2106672 Msa0933590:intron 45.0%
GAGTTTATTTGTGTGAGCCC+GGG - chr6_3:2106654-2106673 Msa0933590:intron 45.0%
!!! ATCCGGACCAGAGGTATTTT+TGG - chr6_3:2106731-2106750 Msa0933590:intron 45.0%
GAAAATGTAATCCGGACCAG+AGG - chr6_3:2106740-2106759 Msa0933590:intron 45.0%
! CTGGTCCGGATTACATTTTC+CGG + chr6_3:2106740-2106759 Msa0933580:intron 45.0%
ACAATCCGGACCAATTCGAT+AGG + chr6_3:2106790-2106809 Msa0933580:intron 45.0%
!! TTGCTTTTCAGCTTATGCGG+GGG - chr6_3:2106868-2106887 Msa0933590:intron 45.0%
GTGTTCCGGAAAACAGAATC+CGG + chr6_3:2106986-2107005 Msa0933580:intron 45.0%
AAAGCGTATAGCATCTGGTC+CGG - chr6_3:2107008-2107027 Msa0933590:intron 45.0%
ATTGCATTGCAGCTTGTGTG+GGG - chr6_3:2107079-2107098 Msa0933590:intron 45.0%
CAATTGCATTGCAGCTTGTG+TGG - chr6_3:2107081-2107100 Msa0933590:intron 45.0%
ACAAGCTGCAATGCAATTGC+AGG + chr6_3:2107082-2107101 Msa0933580:intron 45.0%
CAAGCTGCAATGCAATTGCA+GGG + chr6_3:2107083-2107102 Msa0933580:intron 45.0%
!! TAGGAGTGTTTGTGGTGTCA+TGG - chr6_3:2107132-2107151 Msa0933590:intron 45.0%
ACCGTCCAACCACTAATTGA+TGG + chr6_3:2107295-2107314 Msa0933580:intron 45.0%
GCCATCAATTAGTGGTTGGA+CGG - chr6_3:2107299-2107318 Msa0933590:intron 45.0%
GAGTGCCATCAATTAGTGGT+TGG - chr6_3:2107303-2107322 Msa0933590:intron 45.0%
! AAGCCAATGCTGAAGCATTC+CGG + chr6_3:2107332-2107351 Msa0933580:intron 45.0%
GCATTCCGGGTTATACAATC+CGG + chr6_3:2107346-2107365 Msa0933580:intron 45.0%
GTGCGATTATGGTGCTCTTA+TGG - chr6_3:2107417-2107436 Msa0933590:intron 45.0%
GCACCATAATCGCACTAATC+CGG + chr6_3:2107422-2107441 Msa0933580:intron 45.0%
GCGTTCCGGAATATACAATC+TGG - chr6_3:2107478-2107497 Msa0933590:intron 45.0%
!!! GCCACACACGTTTTTTACTG+TGG + chr6_3:2107521-2107540 Msa0933580:intron 45.0%
TGGGTGAAAAACGATTGGGA+AGG - chr6_3:2107592-2107611 Msa0933590:intron 45.0%
!! GGAAGGGTATTTATAGGGAG+GGG - chr6_3:2107615-2107634 Msa0933590:intron 45.0%
! AGAAATGGTGGGGTTTGGAA+GGG - chr6_3:2107631-2107650 Msa0933590:intron 45.0%
GTTGTAGAAGGAAGAAGAGG+AGG - chr6_3:2107668-2107687 Msa0933590:intron 45.0%
! CAACCATGGTTTTCCATCGT+TGG + chr6_3:2107684-2107703 Msa0933580:intron 45.0%
ACGAGGCCCTTATCTATGAA+AGG - chr6_3:2107710-2107729 Msa0933590:intron 45.0%
GGCCTCGTTGAAAACTTTCA+GGG + chr6_3:2107722-2107741 Msa0933580:intron 45.0%
GTATGAACGGTCAATGAGGA+AGG + chr6_3:2107748-2107767 Msa0933580:intron 45.0%
CTTGGCTATTGGAGGAAAAC+CGG - chr6_3:2107880-2107899 Msa0933590:intron 45.0%
AGCAGTAACTTGGCTATTGG+AGG - chr6_3:2107888-2107907 Msa0933590:intron 45.0%
GATCGGACATAGCAGTAACT+TGG - chr6_3:2107898-2107917 Msa0933590:intron 45.0%
TATGTCCGATCACATAGCAG+TGG + chr6_3:2107907-2107926 Msa0933580:intron 45.0%
CCTAACCACTGCTATGTGAT+CGG - chr6_3:2107915-2107934 Msa0933590:intron 45.0%
ATAGCAGTGGTTAGGCTCTT+AGG + chr6_3:2107920-2107939 Msa0933580:intron 45.0%
ATCCGGACAAGGGGTAAAAT+TGG + chr6_3:2108240-2108259 Msa0933580:intron 45.0%
TAGTGACGTTGGATCGAGAT+CGG - chr6_3:2108455-2108474 Msa0933590:intron 45.0%
ATATTTATGTCCAGGCCCGA+GGG - chr6_3:2108564-2108583 Msa0933590:intron 45.0%
AATATTTATGTCCAGGCCCG+AGG - chr6_3:2108565-2108584 Msa0933590:intron 45.0%
AAAGCATAGAGGATACAGCG+GGG - chr6_3:2109053-2109072 Msa0933590:intron 45.0%
CAAAGCATAGAGGATACAGC+GGG - chr6_3:2109054-2109073 Msa0933590:intron 45.0%
!! TGGAAGGTACTCTCTATGTC+GGG - chr6_3:2109827-2109846 Msa0933590:intron 45.0%
!!! GGTGTCACTTTTGAACCAAG+TGG + chr6_3:2105488-2105507 Msa0933580:intron 45.0%
TTGTAAAGGGCTGGGATCAA+AGG + chr6_3:2110285-2110304 Msa0933580:intron 45.0%
CTTGTTTGTGACAGCCTTCT+TGG - chr6_3:2099381-2099400 Msa0933570:intron 45.0%
GAGTAAAATACATCGGCCAC+TGG - chr6_3:2110924-2110943 None:intergenic 45.0%
AGGGCTTGGATCAAATGCAA+AGG - chr6_3:2111601-2111620 None:intergenic 45.0%
! CAAAAGTCTTGTAGAGGGCT+TGG - chr6_3:2105920-2105939 Msa0933590:intron 45.0%
! CCCTCTACAAGACTTTTGTG+TGG + chr6_3:2099438-2099457 Msa0933580:CDS 45.0%
! GCCACACAAAAGTCTTGTAG+AGG - chr6_3:2105914-2105933 Msa0933590:intron 45.0%
GCAATCAATGACACCAAGAC+CGG + chr6_3:2111639-2111658 Msa0933580:intron 45.0%
AGTATACATACCACCGGTCT+TGG - chr6_3:2111655-2111674 None:intergenic 45.0%
CAAGGATCCAAAGCATGCTA+CGG + chr6_3:2111867-2111886 Msa0933580:CDS 45.0%
TCATTTGCCGTAGCATGCTT+TGG - chr6_3:2111877-2111896 None:intergenic 45.0%
!!! GGTGTCACTTTTGAACCAAG+TGG - chr6_3:2105488-2105507 Msa0933590:CDS 45.0%
!! TTGGAGGGTACTCTCTATGT+CGG + chr6_3:2112081-2112100 Msa0933580:CDS 45.0%
!! TCTCGCCAAAGCTTTTCAAG+TGG + chr6_3:2112314-2112333 Msa0933580:CDS 45.0%
!!! ATATTTTATTCAAATATAAA+AGG - chr6_3:2100374-2100393 Msa0933570:intron 5.0%
!! ATTATTATTTATATATGTTT+CGG + chr6_3:2103509-2103528 Msa0933580:intron 5.0%
!!! ATAATATAATTTTTTTTTTG+TGG - chr6_3:2103663-2103682 None:intergenic 5.0%
!! TATTAATTAGTAAAAAAAAT+TGG - chr6_3:2110858-2110877 None:intergenic 5.0%
TTGTAGAGGGCTGGGATCAA+AGG - chr6_3:2105928-2105947 Msa0933590:intron 50.0%
!! CTCGCGTTGACTTTGCATCT+AGG + chr6_3:2099818-2099837 Msa0933580:CDS 50.0%
!! CGCGTTGACTTTGCATCTAG+GGG + chr6_3:2099820-2099839 Msa0933580:CDS 50.0%
TTGGCTGCTAAGTCCAGCAA+TGG - chr6_3:2105196-2105215 Msa0933590:CDS 50.0%
GGACTTAGCAGCCAAAATCC+AGG + chr6_3:2100045-2100064 Msa0933580:CDS 50.0%
!! CGCTAATGACTTGCTCCTTC+TGG + chr6_3:2100543-2100562 Msa0933580:intron 50.0%
TCTCACCAAGGCTCTTCAAG+TGG - chr6_3:2101303-2101322 Msa0933570:intron 50.0%
ATGGCTGTTAAGCCCGGAAA+TGG + chr6_3:2101385-2101404 Msa0933580:intron 50.0%
! GAAATGCAGCTGCCATTTCC+GGG - chr6_3:2101400-2101419 Msa0933570:CDS 50.0%
! GGAAATGCAGCTGCCATTTC+CGG - chr6_3:2101401-2101420 Msa0933570:CDS 50.0%
AGGGTGGATAACTGTAAGGG+TGG + chr6_3:2101850-2101869 Msa0933580:intron 50.0%
ATCTAGGGAGGGATTGAGAG+AGG + chr6_3:2103252-2103271 Msa0933580:intron 50.0%
TCTAGGGAGGGATTGAGAGA+GGG + chr6_3:2103253-2103272 Msa0933580:intron 50.0%
CCTCCTTAGCTTAGCTCAGT+TGG - chr6_3:2103437-2103456 None:intergenic 50.0%
CCAACTGAGCTAAGCTAAGG+AGG + chr6_3:2103434-2103453 Msa0933580:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + chr6_3:2103568-2103587 Msa0933580:intron 50.0%
GGACTTAGCAGCCAAAATCC+AGG - chr6_3:2100045-2100064 Msa0933570:intron 50.0%
TTGGCTGCTAAGTCCAGCAA+TGG + chr6_3:2105196-2105215 Msa0933580:intron 50.0%
GGAAATGCAGTTGCCATTGC+TGG - chr6_3:2105212-2105231 Msa0933590:CDS 50.0%
!! GTAGCTCTAGGGTGAGTATG+TGG + chr6_3:2105380-2105399 Msa0933580:intron 50.0%
!! CTCTAGGGTGAGTATGTGGA+GGG + chr6_3:2105384-2105403 Msa0933580:intron 50.0%
TTGTAGAGGGCTGGGATCAA+AGG + chr6_3:2105928-2105947 Msa0933580:intron 50.0%
GGGGGCTTGATTTCATGGTT+TGG - chr6_3:2106633-2106652 Msa0933590:intron 50.0%
AACCATGAAATCAAGCCCCC+CGG + chr6_3:2106633-2106652 Msa0933580:intron 50.0%
TTTATTTGTGTGAGCCCGGG+GGG - chr6_3:2106651-2106670 Msa0933590:intron 50.0%
GTTTATTTGTGTGAGCCCGG+GGG - chr6_3:2106652-2106671 Msa0933590:intron 50.0%
CTTATGCGGGGGTCGTATAA+CGG - chr6_3:2106857-2106876 Msa0933590:intron 50.0%
AATTGCAGGGGTCGTATGAG+CGG + chr6_3:2106886-2106905 Msa0933580:intron 50.0%
! CTGGTCCGGATTCTGTTTTC+CGG - chr6_3:2106994-2107013 Msa0933590:intron 50.0%
! AGCCAATGCTGAAGCATTCC+GGG + chr6_3:2107333-2107352 Msa0933580:intron 50.0%
AACCCGGAATGCTTCAGCAT+TGG - chr6_3:2107338-2107357 Msa0933590:intron 50.0%
TTGTAGGGCGAAGGACATTC+CGG - chr6_3:2107368-2107387 Msa0933590:intron 50.0%
TGCACTTCTTTGTAGGGCGA+AGG - chr6_3:2107377-2107396 Msa0933590:intron 50.0%
GTGCTCTTATGGTGAACGAG+GGG - chr6_3:2107406-2107425 Msa0933590:intron 50.0%
GGTGCTCTTATGGTGAACGA+GGG - chr6_3:2107407-2107426 Msa0933590:intron 50.0%
TGGTGCTCTTATGGTGAACG+AGG - chr6_3:2107408-2107427 Msa0933590:intron 50.0%
GGGGTGGGTGAAAAACGATT+GGG - chr6_3:2107596-2107615 Msa0933590:intron 50.0%
AGGGGTGGGTGAAAAACGAT+TGG - chr6_3:2107597-2107616 Msa0933590:intron 50.0%
GGGTATTTATAGGGAGGGGT+GGG - chr6_3:2107611-2107630 Msa0933590:intron 50.0%
! AGGGTATTTATAGGGAGGGG+TGG - chr6_3:2107612-2107631 Msa0933590:intron 50.0%
! GAGAAATGGTGGGGTTTGGA+AGG - chr6_3:2107632-2107651 Msa0933590:intron 50.0%
! GTGTGAGAAATGGTGGGGTT+TGG - chr6_3:2107636-2107655 Msa0933590:intron 50.0%
GGATGGTGTGAGAAATGGTG+GGG - chr6_3:2107641-2107660 Msa0933590:intron 50.0%
GGGATGGTGTGAGAAATGGT+GGG - chr6_3:2107642-2107661 Msa0933590:intron 50.0%
AGGGATGGTGTGAGAAATGG+TGG - chr6_3:2107643-2107662 Msa0933590:intron 50.0%
GAGAGGGATGGTGTGAGAAA+TGG - chr6_3:2107646-2107665 Msa0933590:intron 50.0%
GAAGGAAGAAGAGGAGGAGA+GGG - chr6_3:2107662-2107681 Msa0933590:intron 50.0%
AGAAGGAAGAAGAGGAGGAG+AGG - chr6_3:2107663-2107682 Msa0933590:intron 50.0%
AGGCCAACGATGGAAAACCA+TGG - chr6_3:2107690-2107709 Msa0933590:intron 50.0%
GGGCCTCGTTGAAAACTTTC+AGG + chr6_3:2107721-2107740 Msa0933580:intron 50.0%
AACAAAGCGCGGTTCATCTG+AGG + chr6_3:2107782-2107801 Msa0933580:intron 50.0%
ACAAAGCGCGGTTCATCTGA+GGG + chr6_3:2107783-2107802 Msa0933580:intron 50.0%
GGTTCATCTGAGGGTCATGT+GGG + chr6_3:2107792-2107811 Msa0933580:intron 50.0%
! GTTATTAGCTTCGCCTGCCT+GGG + chr6_3:2107823-2107842 Msa0933580:intron 50.0%
TATTGGAGGAAAACCGGAGG+AGG - chr6_3:2107874-2107893 Msa0933590:intron 50.0%
CCGATCACATAGCAGTGGTT+AGG + chr6_3:2107912-2107931 Msa0933580:intron 50.0%
CTTGTCCGGATTCCGTAATC+CGG - chr6_3:2108231-2108250 Msa0933590:intron 50.0%
GGATTACGGAATCCGGACAA+GGG + chr6_3:2108230-2108249 Msa0933580:intron 50.0%
GATTACGGAATCCGGACAAG+GGG + chr6_3:2108231-2108250 Msa0933580:intron 50.0%
CACAATGACTCTCATGCCCT+CGG + chr6_3:2108545-2108564 Msa0933580:intron 50.0%
ACAATGACTCTCATGCCCTC+GGG + chr6_3:2108546-2108565 Msa0933580:intron 50.0%
GGACTTAGCAGCCAAAATCC+AGG - chr6_3:2100045-2100064 Msa0933570:intron 50.0%
TTGGCTGCTAAGTCCAGCAA+TGG + chr6_3:2105196-2105215 Msa0933580:intron 50.0%
!! GTAGCTCTAGGGTGAGTATG+TGG + chr6_3:2105380-2105399 Msa0933580:intron 50.0%
ATCAATGACACCAAGACCGG+TGG + chr6_3:2111642-2111661 Msa0933580:intron 50.0%
!! TGGAGGGTACTCTCTATGTC+GGG + chr6_3:2112082-2112101 Msa0933580:CDS 50.0%
TTGGCTGCTAAGTCCAGCAA+TGG - chr6_3:2105196-2105215 Msa0933590:CDS 50.0%
GGACTTAGCAGCCAAAATCC+AGG + chr6_3:2100045-2100064 Msa0933580:CDS 50.0%
AGGGCTGGGATCAAAGGCAA+AGG - chr6_3:2105934-2105953 Msa0933590:intron 55.0%
!! GCTCTAGGGTGAGTATGTGG+AGG - chr6_3:2105383-2105402 Msa0933590:CDS 55.0%
!! GTGGCTCTAGGGTGAGTATG+TGG - chr6_3:2099856-2099875 Msa0933570:intron 55.0%
GGAAATGCTCTCGCCATTGC+TGG + chr6_3:2100024-2100043 Msa0933580:CDS 55.0%
!! ACGGCTCTAGGATGAGCATG+TGG + chr6_3:2101569-2101588 Msa0933580:intron 55.0%
!! GCTCTAGGATGAGCATGTGG+AGG + chr6_3:2101572-2101591 Msa0933580:intron 55.0%
CTAGGGAGGGATTGAGAGAG+GGG + chr6_3:2103254-2103273 Msa0933580:intron 55.0%
!! GATTGAGAGAGGGGCACCTA+AGG + chr6_3:2103263-2103282 Msa0933580:intron 55.0%
!! AGAGAGGGGCACCTAAGGTT+GGG + chr6_3:2103268-2103287 Msa0933580:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr6_3:2103567-2103586 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr6_3:2103564-2103583 Msa0933580:intron 55.0%
!! CAGTTGGTAGGGACAACGCA+TGG + chr6_3:2103580-2103599 Msa0933580:intron 55.0%
AGACTCTTCTGGTGGCTCTC+TGG - chr6_3:2104123-2104142 None:intergenic 55.0%
AGGCCGAACGTCGTGATCAA+AGG - chr6_3:2104327-2104346 None:intergenic 55.0%
!! GCTCTAGGGTGAGTATGTGG+AGG + chr6_3:2105383-2105402 Msa0933580:intron 55.0%
AGGGCTGGGATCAAAGGCAA+AGG + chr6_3:2105934-2105953 Msa0933580:intron 55.0%
ACCATGAAATCAAGCCCCCC+GGG + chr6_3:2106634-2106653 Msa0933580:intron 55.0%
AAACGTGTGTGGCAGACCAC+CGG - chr6_3:2107514-2107533 Msa0933590:intron 55.0%
GAAGAAGAGGAGGAGAGGGA+TGG - chr6_3:2107658-2107677 Msa0933590:intron 55.0%
CGGTTCATCTGAGGGTCATG+TGG + chr6_3:2107791-2107810 Msa0933580:intron 55.0%
! GGTTATTAGCTTCGCCTGCC+TGG + chr6_3:2107822-2107841 Msa0933580:intron 55.0%
GGCTATTGGAGGAAAACCGG+AGG - chr6_3:2107877-2107896 Msa0933590:intron 55.0%
CGGATTACGGAATCCGGACA+AGG + chr6_3:2108229-2108248 Msa0933580:intron 55.0%
GGAAAAAAATAGGGCGCGCG+AGG + chr6_3:2108261-2108280 Msa0933580:intron 55.0%
! CGAGGGCATGAGAGTCATTG+TGG - chr6_3:2108547-2108566 Msa0933590:intron 55.0%
GGAAATGCGGTTGCCATTGC+TGG - chr6_3:2109696-2109715 Msa0933590:CDS 55.0%
!! GCTCTAGGGTGAGTATGTGG+AGG + chr6_3:2105383-2105402 Msa0933580:intron 55.0%
AGGGCTGGGATCAAAGGCAA+AGG + chr6_3:2105934-2105953 Msa0933580:intron 55.0%
!! GCTCTAGGGTGAGTATGTGG+AGG - chr6_3:2105383-2105402 Msa0933590:CDS 55.0%
!! GTGGCTCTAGGGTGAGTATG+TGG - chr6_3:2099856-2099875 Msa0933570:intron 55.0%
GGAAATGCTCTCGCCATTGC+TGG + chr6_3:2100024-2100043 Msa0933580:CDS 55.0%
!! GAGAGAGGGGCACCTAAGGT+TGG + chr6_3:2103267-2103286 Msa0933580:intron 60.0%
! TTTTTACAGGGCGCGCGACG+AGG - chr6_3:2106706-2106725 Msa0933590:intron 60.0%
AACCGCGCTGCAACAAAGCG+CGG + chr6_3:2107771-2107790 Msa0933580:intron 60.0%
! AACCGCGCTTTGTTGCAGCG+CGG - chr6_3:2107776-2107795 Msa0933590:intron 60.0%
GAGGGTCATGTGGGTCAGTG+TGG + chr6_3:2107801-2107820 Msa0933580:intron 60.0%
AACCGGAGGAGGAGGGAAGA+GGG - chr6_3:2107863-2107882 Msa0933590:intron 60.0%
AAACCGGAGGAGGAGGGAAG+AGG - chr6_3:2107864-2107883 Msa0933590:intron 60.0%
GGAGGAAAACCGGAGGAGGA+GGG - chr6_3:2107870-2107889 Msa0933590:intron 60.0%
TGGAGGAAAACCGGAGGAGG+AGG - chr6_3:2107871-2107890 Msa0933590:intron 60.0%
CGCGAGGAAAGCCATAGGGT+GGG + chr6_3:2108277-2108296 Msa0933580:intron 60.0%
!! GATGGTGGGGGCCCAACCTT+AGG - chr6_3:2103282-2103301 None:intergenic 65.0%
GCCCGGGGGGCTTGATTTCA+TGG - chr6_3:2106638-2106657 Msa0933590:intron 65.0%
TCCGGAACGCCTCAGTGCCA+TGG + chr6_3:2107488-2107507 Msa0933580:intron 65.0%
! GCCATGGCACTGAGGCGTTC+CGG - chr6_3:2107492-2107511 Msa0933590:intron 65.0%
GAACGCCTCAGTGCCATGGC+CGG + chr6_3:2107492-2107511 Msa0933580:intron 65.0%
GCTCACACTTACGCCCAGGC+AGG - chr6_3:2107839-2107858 Msa0933590:intron 65.0%
GGGTGCTCACACTTACGCCC+AGG - chr6_3:2107843-2107862 Msa0933590:intron 65.0%
CACCCTCTTCCCTCCTCCTC+CGG + chr6_3:2107858-2107877 Msa0933580:intron 65.0%
GGCGCGCGAGGAAAGCCATA+GGG + chr6_3:2108273-2108292 Msa0933580:intron 65.0%
GCGCGAGGAAAGCCATAGGG+TGG + chr6_3:2108276-2108295 Msa0933580:intron 65.0%
GCGCGACGAGGCCATAGGGT+GGG - chr6_3:2106694-2106713 Msa0933590:intron 70.0%
GACCACCGGCCATGGCACTG+AGG - chr6_3:2107500-2107519 Msa0933590:intron 70.0%
GTGTGGCAGACCACCGGCCA+TGG - chr6_3:2107508-2107527 Msa0933590:intron 70.0%
GGGCGCGCGAGGAAAGCCAT+AGG + chr6_3:2108272-2108291 Msa0933580:intron 70.0%
GACTCTCATGCCCTCGGGCC+TGG + chr6_3:2108551-2108570 Msa0933580:intron 70.0%
CGCGCGACGAGGCCATAGGG+TGG - chr6_3:2106695-2106714 Msa0933590:intron 75.0%
GGGCGCGCGACGAGGCCATA+GGG - chr6_3:2106698-2106717 Msa0933590:intron 75.0%
AGGGCGCGCGACGAGGCCAT+AGG - chr6_3:2106699-2106718 Msa0933590:intron 75.0%
CGCCTCAGTGCCATGGCCGG+TGG + chr6_3:2107495-2107514 Msa0933580:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 2099367 2112389 2099367 ID=Msa0933580;Name=Msa0933580
chr6_3 mRNA 2099367 2112389 2099367 ID=Msa0933580-mRNA-1;Parent=Msa0933580;Name=Msa0933580-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|0.33|0.5|4|0|354
chr6_3 exon 2099367 2099484 2099367 ID=Msa0933580-mRNA-1:exon:863;Parent=Msa0933580-mRNA-1
chr6_3 exon 2099656 2099888 2099656 ID=Msa0933580-mRNA-1:exon:864;Parent=Msa0933580-mRNA-1
chr6_3 exon 2099898 2100066 2099898 ID=Msa0933580-mRNA-1:exon:865;Parent=Msa0933580-mRNA-1
chr6_3 exon 2111845 2112389 2111845 ID=Msa0933580-mRNA-1:exon:866;Parent=Msa0933580-mRNA-1
chr6_3 CDS 2099367 2099484 2099367 ID=Msa0933580-mRNA-1:cds;Parent=Msa0933580-mRNA-1
chr6_3 CDS 2099656 2099888 2099656 ID=Msa0933580-mRNA-1:cds;Parent=Msa0933580-mRNA-1
chr6_3 CDS 2099898 2100066 2099898 ID=Msa0933580-mRNA-1:cds;Parent=Msa0933580-mRNA-1
chr6_3 CDS 2111845 2112389 2111845 ID=Msa0933580-mRNA-1:cds;Parent=Msa0933580-mRNA-1
Gene Sequence

>Msa0933580

ATGAAGACTTCAATCTTGTTTGTGACAGCCTTCTTGGCTTTAGCATCTTGTGCCTTTGCCTTTGATCCCAGCCCTCTACAAGACTTTTGTGTGGCTATCAATGACACCAAGAATGGTGTATTTGTGAATGGAAAATTTTGCAAGGATCCAAAGCTTGCTACACCAAATGATTTCTTTTTCTCAGTTAAAGAAGGAAACACGTCAAATCCACTTGGTTCAAAAGTGACACAAGTAACCGTTAACGAGATATTAGGGTTAAACACACTTGGTATCTCTCTTGCTCGCGTTGACTTTGCATCTAGGGGACTAAATCCTCCACATACTCACCCTAGAGCCACTGAAATTCTTATAGGTACACTTTATGTCGGGTTTGTTACTTCTAATCCAGAAAACCGTCTCATCACAAAAGTACTAAATAAAGGAGATGTGTTTGTGTTTCCAATTGGCCTCATTCACTTTCAATTGAATGTTGGGTATGGAAATGCTCTCGCCATTGCTGGACTTAGCAGCCAAAATCCAGTGTTTGTGAATGGCAAATTCTGCAAGGATCCAAAGCATGCTACGGCAAATGATTTCTTCTACTCGGTGAAAGAAGGAAATACATCAAATCCACTTGGTTCAAAAGTGACACCGGTTACCGTTAATGAGATACTAGGACTAAACACTCTAGGTATCTCTCTTGCTCGTATTGACTTTGCATCTAGGGGACTAAATCCTCCACATACTCACCCTAGAGCCACTGAGATTCTTATAGTGTTGGAGGGTACTCTCTATGTCGGGTTTGTTACTTCTAATCCAGAAAACCGTCTCATCACAAAAGTACTCAACAAAGGAGATGTCTTCGTGTTTCCAATTGGCCTCATTCACTTTCAATTGAATGTTGGGTATGGAAATGCTCTCGCCATTGCTGGACTTAGCAGCCAAAATCCAGGTGTTATTACTATTGCTAATGCTGTATTTGGGTCTAATCCAAAGATCTCTTCAGAAGTTCTCGCCAAAGCTTTTCAAGTGGATAATAAAATAGTGAACAATCTTCAAAAACAATTTTGGGTGGACAACAACTAG
Protein sequence

>Msa0933580

MKTSILFVTAFLALASCAFAFDPSPLQDFCVAINDTKNGVFVNGKFCKDPKLATPNDFFFSVKEGNTSNPLGSKVTQVTVNEILGLNTLGISLARVDFASRGLNPPHTHPRATEILIGTLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNALAIAGLSSQNPVFVNGKFCKDPKHATANDFFYSVKEGNTSNPLGSKVTPVTVNEILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNALAIAGLSSQNPGVITIANAVFGSNPKISSEVLAKAFQVDNKIVNNLQKQFWVDNN*