AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0933590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0933590 MtrunA17_Chr6g0449731 87.019 208 25 1 102 307 12 219 2.49e-125 357
Msa0933590 MtrunA17_Chr6g0449731 76.923 156 5 1 1 125 47 202 7.87e-72 221
Msa0933590 MtrunA17_Chr6g0449771 86.603 209 26 1 102 308 12 220 3.31e-125 357
Msa0933590 MtrunA17_Chr6g0449771 76.282 156 6 1 1 125 47 202 5.10e-71 219
Msa0933590 MtrunA17_Chr6g0449751 86.124 209 27 1 102 308 12 220 2.86e-124 354
Msa0933590 MtrunA17_Chr6g0449751 76.282 156 6 1 1 125 47 202 6.62e-71 219
Msa0933590 MtrunA17_Chr6g0449761 86.341 205 26 1 102 304 12 216 9.88e-122 348
Msa0933590 MtrunA17_Chr6g0449761 76.923 156 5 1 1 125 47 202 1.15e-71 221
Msa0933590 MtrunA17_Chr1g0189841 81.720 186 32 2 125 308 37 222 3.51e-104 303
Msa0933590 MtrunA17_Chr1g0189841 67.722 158 18 3 1 125 47 204 4.13e-58 186
Msa0933590 MtrunA17_Chr2g0285871 78.010 191 41 1 119 308 31 221 3.64e-101 296
Msa0933590 MtrunA17_Chr2g0285871 63.057 157 26 2 1 125 47 203 1.24e-54 177
Msa0933590 MtrunA17_Chr4g0007041 77.487 191 42 1 119 308 31 221 5.45e-101 295
Msa0933590 MtrunA17_Chr4g0007041 63.057 157 26 2 1 125 47 203 1.22e-54 177
Msa0933590 MtrunA17_Chr4g0007031 76.963 191 43 1 119 308 31 221 1.57e-100 294
Msa0933590 MtrunA17_Chr4g0007031 62.420 157 27 2 1 125 47 203 3.72e-54 176
Msa0933590 MtrunA17_Chr5g0419971 76.963 191 43 1 119 308 31 221 1.57e-100 294
Msa0933590 MtrunA17_Chr5g0419971 62.420 157 27 2 1 125 47 203 3.72e-54 176
Msa0933590 MtrunA17_Chr5g0419981 76.963 191 43 1 119 308 31 221 1.57e-100 294
Msa0933590 MtrunA17_Chr5g0419981 62.420 157 27 2 1 125 47 203 3.72e-54 176
Msa0933590 MtrunA17_Chr4g0007051 76.963 191 43 1 119 308 31 221 1.70e-100 294
Msa0933590 MtrunA17_Chr4g0007051 62.420 157 27 2 1 125 47 203 3.76e-54 176
Msa0933590 MtrunA17_Chr6g0449781 71.500 200 56 1 109 308 21 219 5.28e-92 272
Msa0933590 MtrunA17_Chr6g0449781 59.740 154 30 2 3 125 49 201 1.24e-46 156
Msa0933590 MtrunA17_Chr6g0449791 71.348 178 50 1 119 295 31 208 3.47e-83 249
Msa0933590 MtrunA17_Chr6g0449791 57.419 155 34 2 3 125 49 203 4.94e-44 149
Msa0933590 MtrunA17_Chr1g0156131 66.667 171 55 1 135 303 39 209 5.31e-77 234
Msa0933590 MtrunA17_Chr1g0156131 55.769 156 36 2 3 125 41 196 1.27e-46 156
Msa0933590 MtrunA17_Chr2g0292831 65.698 172 57 1 134 303 41 212 2.93e-76 232
Msa0933590 MtrunA17_Chr2g0292831 55.063 158 38 2 1 125 42 199 1.04e-46 156
Msa0933590 MtrunA17_Chr2g0292901 65.698 172 57 1 134 303 42 213 1.91e-75 230
Msa0933590 MtrunA17_Chr2g0292901 54.430 158 39 2 1 125 43 200 3.15e-45 152
Msa0933590 MtrunA17_Chr2g0292861 64.535 172 58 2 135 303 7 178 1.01e-73 224
Msa0933590 MtrunA17_Chr2g0292861 53.459 159 40 3 1 125 7 165 5.08e-45 151
Msa0933590 MtrunA17_Chr2g0292841 64.535 172 58 2 135 303 7 178 3.12e-72 221
Msa0933590 MtrunA17_Chr2g0292841 54.777 157 37 3 3 125 9 165 6.80e-45 150
Msa0933590 MtrunA17_Chr1g0193671 45.128 195 103 2 110 302 21 213 9.21e-52 169
Msa0933590 MtrunA17_Chr1g0193671 35.762 151 62 3 8 125 53 201 2.16e-18 82.0
Msa0933590 MtrunA17_Chr2g0292911 66.949 118 37 1 135 250 7 124 1.81e-50 164
Msa0933590 MtrunA17_Chr2g0292911 48.718 117 27 2 2 85 8 124 2.38e-25 98.6
Msa0933590 MtrunA17_Chr7g0271211 47.179 195 99 2 111 303 19 211 4.17e-50 165
Msa0933590 MtrunA17_Chr7g0271211 39.216 153 58 3 8 127 50 200 1.79e-18 82.4
Msa0933590 MtrunA17_Chr1g0193421 45.178 197 104 2 109 303 21 215 7.60e-50 164
Msa0933590 MtrunA17_Chr1g0193421 35.948 153 61 3 10 127 54 204 1.87e-16 77.0
Msa0933590 MtrunA17_Chr5g0414971 43.367 196 106 3 111 303 26 219 1.87e-42 145
Msa0933590 MtrunA17_Chr5g0414971 38.788 165 61 5 3 133 52 210 8.10e-19 83.6
Msa0933590 MtrunA17_Chr1g0210761 44.500 200 98 6 107 303 18 207 1.05e-41 143
Msa0933590 MtrunA17_Chr1g0210761 50.000 82 37 2 43 124 116 193 3.08e-17 79.0
Msa0933590 MtrunA17_Chr8g0344021 49.664 149 70 2 131 277 39 184 1.82e-39 137
Msa0933590 MtrunA17_Chr8g0344021 38.298 141 51 3 5 112 47 184 9.03e-20 85.9
Msa0933590 MtrunA17_Chr2g0300561 45.029 171 88 3 132 300 37 203 2.72e-38 134
Msa0933590 MtrunA17_Chr2g0300561 35.915 142 56 3 4 112 43 182 5.03e-14 69.7
Msa0933590 MtrunA17_Chr1g0178711 41.765 170 94 3 135 303 56 221 1.02e-36 131
Msa0933590 MtrunA17_Chr1g0178711 47.561 82 39 2 43 124 130 207 4.08e-15 73.2
Msa0933590 MtrunA17_Chr2g0300581 40.936 171 95 3 132 300 37 203 8.18e-33 120
Msa0933590 MtrunA17_Chr2g0300581 32.394 142 61 4 4 112 43 182 9.68e-11 60.5
Msa0933590 MtrunA17_Chr2g0300591 40.936 171 95 3 132 300 37 203 8.90e-33 120
Msa0933590 MtrunA17_Chr3g0084531 40.230 174 98 3 131 303 37 205 2.89e-32 119
Msa0933590 MtrunA17_Chr8g0343911 39.535 172 98 3 131 300 34 201 1.01e-31 117
Msa0933590 MtrunA17_Chr8g0343911 34.459 148 60 5 8 122 45 188 6.11e-12 63.9
Msa0933590 MtrunA17_Chr8g0343934 39.080 174 100 3 131 303 37 205 1.10e-31 117
Msa0933590 MtrunA17_Chr8g0343954 40.230 174 98 3 131 303 37 205 1.15e-31 117
Msa0933590 MtrunA17_Chr2g0302171 40.230 174 98 3 131 303 37 205 3.67e-31 116
Msa0933590 MtrunA17_Chr2g0313961 40.230 174 98 3 131 303 37 205 2.34e-30 114
Msa0933590 MtrunA17_Chr3g0084521 39.412 170 97 3 135 303 40 204 3.73e-30 113
Msa0933590 MtrunA17_Chr2g0297231 39.655 174 99 3 131 303 37 205 5.13e-30 113
Msa0933590 MtrunA17_Chr3g0084511 38.824 170 98 3 135 303 40 204 9.92e-30 112
Msa0933590 MtrunA17_Chr2g0297241 39.655 174 99 3 131 303 37 205 1.26e-29 112
Msa0933590 MtrunA17_Chr4g0003361 39.655 174 98 4 131 303 34 201 3.28e-29 110
Msa0933590 MtrunA17_Chr8g0343961 38.150 173 101 3 132 303 38 205 1.34e-28 109
Msa0933590 MtrunA17_Chr8g0335851 40.523 153 88 2 125 276 41 191 2.51e-28 108
Msa0933590 MtrunA17_Chr8g0343921 40.351 171 94 5 135 303 39 203 5.71e-28 107
Msa0933590 MtrunA17_Chr8g0344051 39.205 176 99 3 131 303 38 208 1.36e-27 106
Msa0933590 MtrunA17_Chr2g0301611 37.647 170 100 3 135 303 41 205 3.47e-27 105
Msa0933590 MtrunA17_Chr2g0302541 37.356 174 103 3 131 303 37 205 2.76e-26 103
Msa0933590 MtrunA17_Chr4g0012651 37.059 170 101 3 135 303 41 205 4.95e-26 102
Msa0933590 MtrunA17_Chr8g0344041 36.000 175 105 3 131 303 40 209 9.84e-26 102
Msa0933590 MtrunA17_Chr7g0217811 36.207 174 105 3 131 303 37 205 1.87e-25 100
Msa0933590 MtrunA17_Chr4g0026191 39.860 143 81 3 162 303 67 205 2.22e-25 100
Msa0933590 MtrunA17_Chr4g0026201 39.860 143 81 3 162 303 67 205 2.52e-25 100
Msa0933590 MtrunA17_Chr8g0344031 36.782 174 104 3 131 303 39 207 7.18e-25 99.4
Msa0933590 MtrunA17_Chr2g0321581 41.176 136 75 3 169 303 73 204 1.12e-24 99.0
Msa0933590 MtrunA17_Chr2g0321581 43.617 94 47 4 36 128 106 194 1.61e-11 62.8
Msa0933590 MtrunA17_Chr2g0321591 41.176 136 75 3 169 303 73 204 1.61e-24 98.6
Msa0933590 MtrunA17_Chr2g0321591 43.617 94 47 4 36 128 106 194 2.26e-11 62.4
Msa0933590 MtrunA17_Chr5g0411961 35.429 175 107 3 130 303 36 205 1.71e-24 98.6
Msa0933590 MtrunA17_Chr2g0321601 40.741 135 75 3 170 303 73 203 3.45e-24 97.4
Msa0933590 MtrunA17_Chr2g0321601 43.617 94 47 4 36 128 105 193 6.18e-12 63.9
Msa0933590 MtrunA17_Chr3g0130241 34.091 176 112 3 125 299 104 276 1.46e-23 97.8
Msa0933590 MtrunA17_Chr2g0286171 34.483 174 105 4 131 303 43 208 1.84e-22 93.2
Msa0933590 MtrunA17_Chr3g0115141 34.731 167 103 3 138 303 45 206 4.92e-22 92.0
Msa0933590 MtrunA17_Chr2g0292881 70.175 57 17 0 181 237 1 57 4.52e-21 84.7
Msa0933590 MtrunA17_Chr3g0084551 32.558 172 102 6 131 300 37 196 9.78e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0933590 AT5G38940.1 67.222 180 57 1 126 303 42 221 5.56e-79 239
Msa0933590 AT5G38940.1 55.128 156 37 2 3 125 53 208 1.60e-43 149
Msa0933590 AT5G38940.2 67.222 180 57 1 126 303 66 245 8.49e-79 240
Msa0933590 AT5G38940.2 55.128 156 37 2 3 125 77 232 2.36e-43 149
Msa0933590 AT5G38930.1 67.778 180 56 1 126 303 42 221 3.10e-78 238
Msa0933590 AT5G38930.1 53.846 156 39 2 3 125 53 208 5.14e-41 142
Msa0933590 AT5G39110.1 65.027 183 61 2 124 303 38 220 4.01e-76 232
Msa0933590 AT5G39110.1 50.314 159 45 3 1 125 49 207 4.46e-37 132
Msa0933590 AT3G05950.1 67.403 181 56 2 126 303 41 221 6.14e-75 229
Msa0933590 AT3G05950.1 52.830 159 41 3 1 125 50 208 1.39e-37 134
Msa0933590 AT5G39120.1 59.903 207 79 3 100 303 14 219 6.70e-75 229
Msa0933590 AT5G39120.1 50.314 159 45 3 1 125 48 206 8.47e-36 129
Msa0933590 AT5G39150.1 59.903 207 79 3 100 303 14 219 8.07e-75 229
Msa0933590 AT5G39150.1 50.955 157 43 3 3 125 50 206 9.52e-36 129
Msa0933590 AT5G39180.1 59.903 207 79 3 100 303 14 219 1.08e-74 229
Msa0933590 AT5G39180.1 50.955 157 43 3 3 125 50 206 1.31e-35 128
Msa0933590 AT5G38910.1 66.111 180 59 2 126 303 40 219 1.33e-74 228
Msa0933590 AT5G38910.1 53.846 156 39 3 3 125 51 206 1.47e-39 139
Msa0933590 AT5G39160.1 65.000 180 60 2 127 303 40 219 1.99e-74 228
Msa0933590 AT5G39160.1 54.140 157 38 3 3 125 50 206 3.92e-39 137
Msa0933590 AT5G39130.1 64.444 180 61 2 127 303 40 219 2.73e-74 228
Msa0933590 AT5G39130.1 52.866 157 40 3 3 125 50 206 2.02e-38 135
Msa0933590 AT5G39190.1 65.000 180 60 2 127 303 40 219 3.78e-74 227
Msa0933590 AT5G39190.1 54.140 157 38 3 3 125 50 206 6.97e-39 137
Msa0933590 AT5G38960.1 64.641 181 61 2 126 303 42 222 3.86e-74 227
Msa0933590 AT5G38960.1 51.572 159 43 3 1 125 51 209 1.10e-38 136
Msa0933590 AT4G14630.1 64.088 181 62 2 126 303 42 222 2.27e-72 223
Msa0933590 AT4G14630.1 50.000 160 46 3 3 128 53 212 7.50e-36 129
Msa0933590 AT3G04200.1 65.746 181 59 2 126 303 42 222 1.35e-70 218
Msa0933590 AT3G04200.1 52.532 158 41 3 2 125 52 209 1.30e-36 131
Msa0933590 AT5G39160.3 64.000 175 60 2 132 303 41 215 2.99e-70 217
Msa0933590 AT5G39160.3 54.140 157 38 3 3 125 46 202 3.70e-39 137
Msa0933590 AT3G04150.1 60.221 181 69 2 126 303 41 221 3.96e-65 204
Msa0933590 AT3G04150.1 46.835 158 50 3 1 124 50 207 5.82e-30 114
Msa0933590 AT3G04150.2 60.335 179 68 2 128 303 56 234 1.44e-64 204
Msa0933590 AT3G04150.2 46.835 158 50 3 1 124 63 220 7.06e-30 114
Msa0933590 AT5G39160.2 66.447 152 50 1 153 303 46 197 3.10e-63 199
Msa0933590 AT5G39160.2 54.676 139 31 2 19 125 46 184 9.50e-35 125
Msa0933590 AT5G39190.2 66.447 152 50 1 153 303 46 197 3.10e-63 199
Msa0933590 AT5G39190.2 54.676 139 31 2 19 125 46 184 9.61e-35 125
Msa0933590 AT3G04190.1 59.669 181 70 2 126 303 41 221 8.80e-63 198
Msa0933590 AT3G04190.1 46.835 158 50 3 1 124 50 207 6.79e-28 108
Msa0933590 AT3G04170.1 57.143 182 72 3 125 303 40 218 1.09e-60 193
Msa0933590 AT3G04170.1 43.038 158 53 4 1 124 50 204 9.21e-25 100
Msa0933590 AT3G04180.1 55.801 181 77 2 126 303 41 221 2.73e-58 187
Msa0933590 AT3G04180.1 43.671 158 55 3 1 124 50 207 3.10e-24 98.6
Msa0933590 AT1G09560.1 45.918 196 102 2 111 304 23 216 2.51e-51 169
Msa0933590 AT1G09560.1 37.179 156 63 3 3 125 49 202 1.21e-17 80.5
Msa0933590 AT5G38910.2 52.222 180 47 3 126 303 40 182 3.15e-49 162
Msa0933590 AT5G38910.2 50.781 128 49 4 3 125 51 169 3.83e-24 97.4
Msa0933590 AT1G02335.1 43.814 194 105 2 112 303 24 215 1.51e-48 162
Msa0933590 AT1G02335.1 35.294 153 64 3 8 127 54 204 6.04e-18 81.3
Msa0933590 AT1G18970.1 48.315 178 86 3 130 305 47 220 2.29e-48 161
Msa0933590 AT1G18970.1 37.748 151 59 3 8 125 57 205 1.44e-20 88.6
Msa0933590 AT5G26700.1 44.670 197 98 4 111 303 20 209 4.36e-48 160
Msa0933590 AT5G26700.1 36.601 153 55 5 8 125 51 196 3.98e-16 76.3
Msa0933590 AT3G62020.1 44.724 199 105 3 108 303 19 215 2.60e-47 159
Msa0933590 AT3G62020.1 37.013 154 61 4 8 127 53 204 7.71e-16 75.5
Msa0933590 AT1G18980.1 48.876 178 85 3 130 305 47 220 2.68e-47 158
Msa0933590 AT1G18980.1 39.735 151 56 3 8 125 57 205 2.40e-20 87.8
Msa0933590 AT3G62020.2 48.333 180 88 3 127 303 9 186 4.00e-47 157
Msa0933590 AT3G62020.2 37.013 154 61 4 8 127 24 175 5.85e-16 75.1
Msa0933590 AT3G05930.1 44.262 183 97 2 124 303 35 215 1.32e-45 154
Msa0933590 AT3G05930.1 34.615 156 66 3 3 124 48 201 4.60e-18 81.6
Msa0933590 AT1G10460.1 41.667 180 99 4 128 303 38 215 1.32e-39 138
Msa0933590 AT1G10460.1 33.735 166 69 6 3 133 47 206 9.44e-13 66.6
Msa0933590 AT3G10080.1 41.081 185 104 3 120 303 39 219 1.97e-38 135
Msa0933590 AT3G10080.1 48.780 82 38 2 43 124 128 205 9.07e-17 78.2
Msa0933590 AT3G10080.2 41.081 185 104 3 120 303 110 290 1.71e-37 135
Msa0933590 AT3G10080.2 48.780 82 38 2 43 124 199 276 3.08e-16 78.2
Msa0933590 AT5G61750.1 46.405 153 77 3 125 275 34 183 6.49e-34 123
Msa0933590 AT5G61750.1 34.177 158 67 5 3 127 46 199 9.06e-14 69.7
Msa0933590 AT5G20630.1 43.624 149 80 2 131 277 37 183 3.12e-33 122
Msa0933590 AT5G20630.1 32.867 143 61 3 3 112 43 183 9.04e-13 66.6
Msa0933590 AT1G74820.1 38.286 175 102 3 131 303 55 225 4.80e-31 116
Msa0933590 AT1G72610.1 38.012 171 100 3 132 300 35 201 2.55e-28 108
Msa0933590 AT5G38950.1 65.625 64 22 0 232 295 2 65 2.61e-20 84.7
Msa0933590 AT5G38950.1 69.492 59 18 0 67 125 2 60 4.20e-19 81.3

Find 64 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAATTGCTAATGCTGTATT+TGG 0.073725 6_3:-2109642 Msa0933590:CDS
ACTATTGCTAATGCTGTATT+TGG 0.092981 6_3:-2105158 Msa0933590:CDS
TAGTAATAACACCTGGATTT+TGG 0.212711 6_3:+2105177 Msa0933580:intron
TTGTGATTACACCTGGATTT+TGG 0.292696 6_3:+2109661 Msa0933580:intron
GTTACTGTTAATGAAATTCT+AGG 0.313332 6_3:-2105464 Msa0933590:CDS
GGAAATGCGGTTGCCATTGC+TGG 0.324286 6_3:-2109693 Msa0933590:CDS
TCCACTTTCAATTGAATGTT+GGG 0.341251 6_3:-2109719 Msa0933590:CDS
TCATTTGCTGTAGCAAGCTT+TGG 0.355521 6_3:+2110032 Msa0933580:intron
AGCAAATGATTTCTTCTTCT+CGG 0.357156 6_3:-2110018 Msa0933590:CDS
GGAAATGCAGTTGCCATTGC+TGG 0.378013 6_3:-2105209 Msa0933590:CDS
AGAATTTCATTAACAGTAAC+CGG 0.384780 6_3:+2105467 Msa0933580:intron
ATTGTCCACTTGGAAAGCTT+TGG 0.404596 6_3:+2109587 Msa0933580:intron
TGAAAGTGAATGAGGCCAAT+TGG 0.419001 6_3:+2105248 Msa0933580:intron
ATCCACTTTCAATTGAATGT+TGG 0.423661 6_3:-2109720 Msa0933590:CDS
TGAAAGTGGATGAGACCAAT+TGG 0.426983 6_3:+2109732 Msa0933580:intron
TCGTATTGACTTTGCATCTA+GGG 0.428209 6_3:-2105414 Msa0933590:CDS
AGTATCTCATTAACAGTAAC+CGG 0.431864 6_3:+2109951 Msa0933580:intron
TTTCAATTGAATGTTGGGTA+TGG 0.435827 6_3:-2109714 Msa0933590:CDS
TTCTTCTTCTCGGTGAAAGA+AGG 0.441261 6_3:-2110008 Msa0933590:CDS
GACGTGTTTGTGTTTCCAAT+TGG 0.442060 6_3:-2109747 Msa0933590:CDS
GATGTCTTCGTGTTTCCAAT+TGG 0.447280 6_3:-2105263 Msa0933590:CDS
ATTGTCCACTTGAAAAGCTT+TGG 0.448442 6_3:+2105103 Msa0933580:intron
CTCGTATTGACTTTGCATCT+AGG 0.450503 6_3:-2105415 Msa0933590:CDS
TTCTTCTACTCGGTGAAAGA+AGG 0.467010 6_3:-2105524 Msa0933590:CDS
TTGGAGGGTACTCTTTATGT+CGG 0.467130 6_3:-2105341 Msa0933590:CDS
CAATTGCTAATGCTGTATTT+GGG 0.467396 6_3:-2109641 Msa0933590:CDS
ATAAGAATCTCAGTAGCTCT+AGG 0.469422 6_3:+2105368 Msa0933580:intron
CATTCACTTTCAATTGAATG+TGG 0.473200 6_3:-2105237 Msa0933590:CDS
TGAGATTCTTATAGTGTTGG+AGG 0.478695 6_3:-2105357 Msa0933590:CDS
TTTCAATTGAATGTGGGGTA+TGG 0.481525 6_3:-2105230 Msa0933590:CDS
TGGAGGGTACTCTTTATGTC+GGG 0.488039 6_3:-2105340 Msa0933590:CDS
ATTCACTTTCAATTGAATGT+GGG 0.504048 6_3:-2105236 Msa0933590:CDS
TACTGAGATTCTTATAGTGT+TGG 0.510386 6_3:-2105360 Msa0933590:CDS
ACCCAACATTCAATTGAAAG+TGG 0.511446 6_3:+2109718 Msa0933580:intron
TTCACTTTCAATTGAATGTG+GGG 0.522926 6_3:-2105235 Msa0933590:CDS
TGGAAGGTACTCTCTATGTC+GGG 0.524543 6_3:-2109824 Msa0933590:intron
TTGGAAGGTACTCTCTATGT+CGG 0.526865 6_3:-2109825 Msa0933590:intron
TTAGCAATTGTGATTACACC+TGG 0.538665 6_3:+2109654 Msa0933580:intron
GGACTTAGCAGCCAAAATCC+AGG 0.549743 6_3:-2105188 Msa0933590:CDS
GGACTTAGCAGCCAAAATCC+AGG 0.549743 6_3:-2109672 Msa0933590:CDS
AGCAAATGATTTCTTCTACT+CGG 0.553402 6_3:-2105534 Msa0933590:CDS
CATTCAATTGAAAGTGAATG+AGG 0.560326 6_3:+2105240 Msa0933580:intron
GTAGCTCTAGGGTGAGTATG+TGG 0.564452 6_3:+2105380 Msa0933580:intron
ATTCTAGGACTAAACACTCT+AGG 0.566279 6_3:-2105449 Msa0933590:CDS
TAAGAATCTCAGTAGCTCTA+GGG 0.576817 6_3:+2105369 Msa0933580:intron
CTCTAGGGTGAGTATGTGGA+GGG 0.577804 6_3:+2105384 Msa0933580:intron
TCAAGTGGACAATAACATAG+TGG 0.579525 6_3:-2105093 Msa0933590:CDS
GTTACTGTTAATGAGATACT+AGG 0.582511 6_3:-2109948 Msa0933590:CDS
TGTGAATGGCAAATTCTGCA+AGG 0.584711 6_3:-2105573 Msa0933590:CDS
CGTATTGACTTTGCATCTAG+GGG 0.590107 6_3:-2105413 Msa0933590:CDS
GAGATTCTTATAGTGTTGGA+GGG 0.592161 6_3:-2105356 Msa0933590:CDS
TTGGCTGCTAAGTCCAGCAA+TGG 0.600072 6_3:+2105196 Msa0933580:intron
TTGGCTGCTAAGTCCAGCAA+TGG 0.600072 6_3:+2109680 Msa0933580:intron
ATACTAGGACTAAACACTCA+AGG 0.626654 6_3:-2109933 Msa0933590:intron
ATCAATGACACCAAGAATGG+TGG 0.627435 6_3:-2105890 Msa0933590:intron
GCTCTAGGGTGAGTATGTGG+AGG 0.639208 6_3:+2105383 Msa0933580:intron
GGAAATACATCAAATCCACT+TGG 0.640192 6_3:-2105503 Msa0933590:CDS
GGAAATACATCAAATCCACT+TGG 0.640192 6_3:-2109987 Msa0933590:CDS
ATCACAAAAGTACTCAACAA+AGG 0.644517 6_3:-2105287 Msa0933590:CDS
ATCACAAAAGTACTCAACAA+AGG 0.644517 6_3:-2109771 Msa0933590:CDS
GAATGTTGGGTATGGAAATG+CGG 0.653866 6_3:-2109706 Msa0933590:CDS
ACTTGGTTCAAAAGTGACAC+CGG 0.669513 6_3:-2105486 Msa0933590:CDS
ACTTGGTTCAAAAGTGACAC+CGG 0.669513 6_3:-2109970 Msa0933590:CDS
TTAGCAATAGTAATAACACC+TGG 0.687379 6_3:+2105170 Msa0933580:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAATATGATTTGTTTTT+TGG - chr6_3:2106254-2106273 Msa0933590:intron 10.0%
!!! AAAATGATATTTAAATTTTG+AGG + chr6_3:2106737-2106756 Msa0933580:intron 10.0%
!! ATTAAAAATAATGTGTAAAA+CGG - chr6_3:2107013-2107032 Msa0933590:intron 10.0%
!!! TTTTTAGTTATGATTTATTT+TGG + chr6_3:2109405-2109424 Msa0933580:intron 10.0%
!! TTGATTAATTAAGATTTACT+TGG - chr6_3:2105172-2105191 Msa0933590:CDS 15.0%
!! TTTAATTATAACTATCAACA+TGG + chr6_3:2106182-2106201 Msa0933580:intron 15.0%
!! ATAAAAACAACATGATTATA+TGG - chr6_3:2106798-2106817 Msa0933590:intron 15.0%
!!! AAATTTTTGATTGAGTTTTA+TGG + chr6_3:2106837-2106856 Msa0933580:intron 15.0%
!!! TTTAAATTCCCTTTAATTTT+AGG - chr6_3:2107181-2107200 Msa0933590:intron 15.0%
!! AAATTACTAACAATAAATTC+CGG + chr6_3:2107477-2107496 Msa0933580:intron 15.0%
!!! TCAAATTTTTTAAGTTTTGT+AGG - chr6_3:2108535-2108554 Msa0933590:intron 15.0%
!!! ACTATAAAATTGTGTATTTT+TGG + chr6_3:2109451-2109470 Msa0933580:intron 15.0%
!! AAGAACTCAAGTTTAAATTT+CGG + chr6_3:2106509-2106528 Msa0933580:intron 20.0%
!! AAACTTCAATTAAAGAGAAA+TGG + chr6_3:2106537-2106556 Msa0933580:intron 20.0%
!!! TATTTAAATTTTGAGGAGAA+TGG + chr6_3:2106730-2106749 Msa0933580:intron 20.0%
!! ACGAAAAACCTAAAATTAAA+GGG + chr6_3:2107192-2107211 Msa0933580:intron 20.0%
!! TACGAAAAACCTAAAATTAA+AGG + chr6_3:2107193-2107212 Msa0933580:intron 20.0%
!! GGTAAAATTGGAAAAAAATA+GGG + chr6_3:2107434-2107453 Msa0933580:intron 20.0%
!! CTTAAAAAATTTGAAGAGAA+TGG + chr6_3:2108529-2108548 Msa0933580:intron 20.0%
!!! GTATTTTTGGAATTTTTACA+GGG - chr6_3:2108968-2108987 Msa0933590:intron 20.0%
!! ATGATGATACCATATATTTA+GGG + chr6_3:2109504-2109523 Msa0933580:intron 20.0%
!!! ACAATCTTCAAAAACAATTT+TGG - chr6_3:2110613-2110632 Msa0933590:intron 20.0%
!!! CAATCTTCAAAAACAATTTT+GGG - chr6_3:2110614-2110633 Msa0933590:intron 20.0%
!! AAGATTTACTTGGTCTTTAT+AGG - chr6_3:2105182-2105201 Msa0933590:CDS 25.0%
! TATTTATAAGCAAGTGACAT+TGG + chr6_3:2105236-2105255 Msa0933580:intron 25.0%
!! TTGTGTATTTTGCTTGTATA+TGG + chr6_3:2105300-2105319 Msa0933580:intron 25.0%
!!! ATTGAAGTCTTCATGTTTTT+TGG + chr6_3:2105334-2105353 Msa0933580:intron 25.0%
! TTTATTCATCTTTACTCGTT+TGG - chr6_3:2105485-2105504 Msa0933590:CDS 25.0%
! TCATAGTTCAATCAGTTTAA+CGG + chr6_3:2105517-2105536 Msa0933580:intron 25.0%
! CATGCTCTATTTATATATGT+TGG + chr6_3:2105570-2105589 Msa0933580:intron 25.0%
!!! AGAACTTCTGAAGAAATTTT+TGG + chr6_3:2106074-2106093 Msa0933580:intron 25.0%
! ACAATCTTCAAAAACAATTC+TGG - chr6_3:2106129-2106148 Msa0933590:intron 25.0%
! CAATCTTCAAAAACAATTCT+GGG - chr6_3:2106130-2106149 Msa0933590:intron 25.0%
! CAAACAATGATATAAGAGTA+AGG + chr6_3:2106224-2106243 Msa0933580:intron 25.0%
!! ATTCGATCATTTAAGATAAC+TGG - chr6_3:2106291-2106310 Msa0933590:intron 25.0%
! TTCAATTAAAGAGAAATGGT+TGG + chr6_3:2106533-2106552 Msa0933580:intron 25.0%
! ACCACATAAATTCAACAATT+TGG - chr6_3:2106561-2106580 Msa0933590:intron 25.0%
! ACCAAATTGTTGAATTTATG+TGG + chr6_3:2106565-2106584 Msa0933580:intron 25.0%
! TAATATGAAACAAAGCATAG+AGG - chr6_3:2106622-2106641 Msa0933590:intron 25.0%
! AAACTGGAAATAATATTGAG+TGG + chr6_3:2106768-2106787 Msa0933580:intron 25.0%
!! TTTTATCTCTCATGTAAAAC+TGG + chr6_3:2106784-2106803 Msa0933580:intron 25.0%
!!! TTTTTCAACTTACTCTCTTT+TGG - chr6_3:2106910-2106929 Msa0933590:intron 25.0%
! ATTGTGTAATATTTATGTCC+AGG - chr6_3:2107114-2107133 Msa0933590:intron 25.0%
!!! ATTTTAGGTTTTTCGTAGTT+AGG - chr6_3:2107196-2107215 Msa0933590:intron 25.0%
! GGGTAAAATTGGAAAAAAAT+AGG + chr6_3:2107435-2107454 Msa0933580:intron 25.0%
! TAACAATAAATTCCGGATTA+CGG + chr6_3:2107470-2107489 Msa0933580:intron 25.0%
! AGGAGATTAGAAATAGATTT+AGG + chr6_3:2107702-2107721 Msa0933580:intron 25.0%
! AAATATATTCCGGAATTTGA+TGG + chr6_3:2108240-2108259 Msa0933580:intron 25.0%
!! AAATTCCGGAATATATTTTC+CGG - chr6_3:2108242-2108261 Msa0933590:intron 25.0%
!! ACTTGTTTAAGGCTATAAAT+AGG - chr6_3:2108455-2108474 Msa0933590:intron 25.0%
!!! TTAGTTTTTTACGAGATTTG+TGG - chr6_3:2108756-2108775 Msa0933590:intron 25.0%
! AAAAATTCCAAAAATACCTC+TGG + chr6_3:2108965-2108984 Msa0933580:intron 25.0%
!!! GGTATTTTTGGAATTTTTAC+AGG - chr6_3:2108967-2108986 Msa0933590:intron 25.0%
!!! TTATTTTTGTCAGTTCATGT+GGG + chr6_3:2109141-2109160 Msa0933580:intron 25.0%
! AACATGATTTAAGTCACATT+GGG + chr6_3:2109165-2109184 Msa0933580:intron 25.0%
! AATGTGACTTAAATCATGTT+CGG - chr6_3:2109165-2109184 Msa0933590:intron 25.0%
! ACATAACATATTGCATGTTT+GGG + chr6_3:2109332-2109351 Msa0933580:intron 25.0%
! AACATAACATATTGCATGTT+TGG + chr6_3:2109333-2109352 Msa0933580:intron 25.0%
! TTACATTCTCCCTAAATATA+TGG - chr6_3:2109492-2109511 Msa0933590:intron 25.0%
! CATGATGATACCATATATTT+AGG + chr6_3:2109505-2109524 Msa0933580:intron 25.0%
! TTTATTCATCTTTACTCGTT+TGG - chr6_3:2105485-2105504 Msa0933590:CDS 25.0%
! TCATAGTTCAATCAGTTTAA+CGG + chr6_3:2105517-2105536 Msa0933580:intron 25.0%
! AGAATTTCATTAACAGTAAC+CGG + chr6_3:2110219-2110238 Msa0933580:intron 25.0%
! GTTACTGTTAATGAAATTCT+AGG - chr6_3:2110219-2110238 Msa0933590:intron 25.0%
! ATTCACTTTCAATTGAATGT+GGG - chr6_3:2110447-2110466 Msa0933590:intron 25.0%
GATATTTCACAATGCAAACA+TGG + chr6_3:2105263-2105282 Msa0933580:intron 30.0%
CATAGTTCAATCAGTTTAAC+GGG + chr6_3:2105516-2105535 Msa0933580:intron 30.0%
ACTATGATACAAAAGTCTCA+CGG - chr6_3:2105530-2105549 Msa0933590:CDS 30.0%
ATTTATATATGTTGGACGTG+AGG + chr6_3:2105562-2105581 Msa0933580:intron 30.0%
! TGTTTTGCAGTTTTTGTGAA+TGG - chr6_3:2105612-2105631 Msa0933590:intron 30.0%
AGCAAATGATTTCTTCTTCT+CGG - chr6_3:2105665-2105684 Msa0933590:intron 30.0%
AGTATCTCATTAACAGTAAC+CGG + chr6_3:2105735-2105754 Msa0933580:intron 30.0%
GTTACTGTTAATGAGATACT+AGG - chr6_3:2105735-2105754 Msa0933590:intron 30.0%
TACTGAGATTCTTATAGTGT+TGG - chr6_3:2105839-2105858 Msa0933590:intron 30.0%
!! ATCACAAAAGTACTCAACAA+AGG - chr6_3:2105912-2105931 Msa0933590:intron 30.0%
ATCCACTTTCAATTGAATGT+TGG - chr6_3:2105963-2105982 Msa0933590:intron 30.0%
TCCACTTTCAATTGAATGTT+GGG - chr6_3:2105964-2105983 Msa0933590:intron 30.0%
TTTCAATTGAATGTTGGGTA+TGG - chr6_3:2105969-2105988 Msa0933590:intron 30.0%
ACAATTGCTAATGCTGTATT+TGG - chr6_3:2106041-2106060 Msa0933590:intron 30.0%
CAATTGCTAATGCTGTATTT+GGG - chr6_3:2106042-2106061 Msa0933590:intron 30.0%
!! TTAAATTTTGAGGAGAATGG+AGG + chr6_3:2106727-2106746 Msa0933580:intron 30.0%
ATGTTATTCTACAAGACACA+AGG - chr6_3:2106857-2106876 Msa0933590:intron 30.0%
!! TTACTCTCTTTTGGTTAAGA+TGG - chr6_3:2106919-2106938 Msa0933590:intron 30.0%
TAGGTCCTTTACATATTCAT+CGG - chr6_3:2106964-2106983 Msa0933590:intron 30.0%
TTTCTCCGATGAATATGTAA+AGG + chr6_3:2106972-2106991 Msa0933580:intron 30.0%
TACACTGCATATTTCAAACT+TGG + chr6_3:2107286-2107305 Msa0933580:intron 30.0%
AATTATTGAATCTGTCGCAT+AGG + chr6_3:2107329-2107348 Msa0933580:intron 30.0%
! TAGTAATTTTCAGATGTCTC+CGG - chr6_3:2107488-2107507 Msa0933590:intron 30.0%
! CATATCCGGATTTTATAATC+CGG + chr6_3:2107510-2107529 Msa0933580:intron 30.0%
GTTCTGCTAAAATACATATC+CGG + chr6_3:2107524-2107543 Msa0933580:intron 30.0%
! GAGATTAGAAATAGGCTTTT+AGG + chr6_3:2107722-2107741 Msa0933580:intron 30.0%
ATAAATGCAGTCAAAAAACG+TGG - chr6_3:2108118-2108137 Msa0933590:intron 30.0%
TCATTCCAGATTGTATATTC+CGG + chr6_3:2108216-2108235 Msa0933580:intron 30.0%
CTAATCCGGAAAATATATTC+CGG + chr6_3:2108250-2108269 Msa0933580:intron 30.0%
ATTGACTGTATTAATGACCT+AGG - chr6_3:2108432-2108451 Msa0933590:intron 30.0%
TGAAGAGAATGGAAGAAAAT+AGG + chr6_3:2108518-2108537 Msa0933580:intron 30.0%
ACAAAATATGCCTATCGAAT+TGG - chr6_3:2108883-2108902 Msa0933590:intron 30.0%
!! TATTTTTGTCAGTTCATGTG+GGG + chr6_3:2109140-2109159 Msa0933580:intron 30.0%
!!! GTTATTTTTGTCAGTTCATG+TGG + chr6_3:2109142-2109161 Msa0933580:intron 30.0%
ACATGATTTAAGTCACATTG+GGG + chr6_3:2109164-2109183 Msa0933580:intron 30.0%
GAACATGATTTAAGTCACAT+TGG + chr6_3:2109166-2109185 Msa0933580:intron 30.0%
!!! AGTTAACTCATGTTGGTTTT+AGG - chr6_3:2109257-2109276 Msa0933590:intron 30.0%
GCATCTTTGTAAAGAATTGA+TGG + chr6_3:2109295-2109314 Msa0933580:intron 30.0%
CATAACATATTGCATGTTTG+GGG + chr6_3:2109331-2109350 Msa0933580:intron 30.0%
ATATGGTATCATCATGAAGT+TGG - chr6_3:2109509-2109528 Msa0933590:intron 30.0%
TATGGTATCATCATGAAGTT+GGG - chr6_3:2109510-2109529 Msa0933590:intron 30.0%
! ATCTTCAATGTCGACATTTT+CGG + chr6_3:2109561-2109580 Msa0933580:intron 30.0%
TGCTACTCATCTTATATGAA+GGG + chr6_3:2109691-2109710 Msa0933580:intron 30.0%
TTGCTACTCATCTTATATGA+AGG + chr6_3:2109692-2109711 Msa0933580:intron 30.0%
CATAGTTCAATCAGTTTAAC+GGG + chr6_3:2105516-2105535 Msa0933580:intron 30.0%
! TGTTTTGCAGTTTTTGTGAA+TGG - chr6_3:2105612-2105631 Msa0933590:intron 30.0%
AGCAAATGATTTCTTCTACT+CGG - chr6_3:2110149-2110168 Msa0933590:intron 30.0%
TACTGAGATTCTTATAGTGT+TGG - chr6_3:2105839-2105858 Msa0933590:intron 30.0%
!! ATCACAAAAGTACTCAACAA+AGG - chr6_3:2105912-2105931 Msa0933590:intron 30.0%
CATTCAATTGAAAGTGAATG+AGG + chr6_3:2110446-2110465 Msa0933580:intron 30.0%
CATTCACTTTCAATTGAATG+TGG - chr6_3:2110446-2110465 Msa0933590:intron 30.0%
TTCACTTTCAATTGAATGTG+GGG - chr6_3:2110448-2110467 Msa0933590:intron 30.0%
! TAGTAATAACACCTGGATTT+TGG + chr6_3:2110509-2110528 Msa0933580:intron 30.0%
TTAGCAATAGTAATAACACC+TGG + chr6_3:2110516-2110535 Msa0933580:intron 30.0%
ACTATTGCTAATGCTGTATT+TGG - chr6_3:2110525-2110544 Msa0933590:intron 30.0%
!! AGAACTTCTGAAGAGATTTT+TGG + chr6_3:2110558-2110577 Msa0933580:intron 30.0%
! TCTTCAAAAACAATTTTGGG+TGG - chr6_3:2110617-2110636 Msa0933590:intron 30.0%
TGAGTGAGTCAATTTGATCT+TGG - chr6_3:2105068-2105087 Msa0933590:CDS 35.0%
TTGCTTGTATATGGTTATGC+AGG + chr6_3:2105291-2105310 Msa0933580:intron 35.0%
! CCACACAAAAGTCTTGTAAA+GGG + chr6_3:2105414-2105433 Msa0933580:intron 35.0%
GCTATCAATGACACAAAGAA+TGG - chr6_3:2105433-2105452 Msa0933590:CDS 35.0%
ATCAATGACACAAAGAATGG+TGG - chr6_3:2105436-2105455 Msa0933590:CDS 35.0%
CTATGATACAAAAGTCTCAC+GGG - chr6_3:2105531-2105550 Msa0933590:CDS 35.0%
GGAAATACATCAAATCCACT+TGG - chr6_3:2105696-2105715 Msa0933590:intron 35.0%
ATACTAGGACTAAACACTCA+AGG - chr6_3:2105750-2105769 Msa0933590:intron 35.0%
!! TCGTATTGACTTTGCATCTA+GGG - chr6_3:2105785-2105804 Msa0933590:intron 35.0%
! TAAGAATCTCAGTAGCTCTA+GGG + chr6_3:2105833-2105852 Msa0933580:intron 35.0%
ATAAGAATCTCAGTAGCTCT+AGG + chr6_3:2105834-2105853 Msa0933580:intron 35.0%
! GAGATTCTTATAGTGTTGGA+AGG - chr6_3:2105843-2105862 Msa0933590:intron 35.0%
! TGAGTACTTTTGTGATGAGA+CGG + chr6_3:2105908-2105927 Msa0933580:intron 35.0%
ACCCAACATTCAATTGAAAG+TGG + chr6_3:2105968-2105987 Msa0933580:intron 35.0%
! TTGTGATTACACCTGGATTT+TGG + chr6_3:2106025-2106044 Msa0933580:intron 35.0%
TTAGCAATTGTGATTACACC+TGG + chr6_3:2106032-2106051 Msa0933580:intron 35.0%
TCTTCAAAAACAATTCTGGG+TGG - chr6_3:2106133-2106152 Msa0933590:intron 35.0%
!! GAGGAGAAAAAGTACTAGAT+GGG + chr6_3:2106708-2106727 Msa0933580:intron 35.0%
CTGGAAATAATATTGAGTGG+TGG + chr6_3:2106765-2106784 Msa0933580:intron 35.0%
TGAAACCCATCAAATCATGT+AGG - chr6_3:2106945-2106964 Msa0933590:intron 35.0%
AAGGACCTACATGATTTGAT+GGG + chr6_3:2106953-2106972 Msa0933580:intron 35.0%
AAAGGACCTACATGATTTGA+TGG + chr6_3:2106954-2106973 Msa0933580:intron 35.0%
! GTTTTTCGTAGTTAGGCAAT+TGG - chr6_3:2107203-2107222 Msa0933590:intron 35.0%
TGTCTCCGGATTATAAAATC+CGG - chr6_3:2107502-2107521 Msa0933590:intron 35.0%
GCTCTTAGGAGATTAGAAAT+AGG + chr6_3:2107730-2107749 Msa0933580:intron 35.0%
GAGATTAGAATTAGGCTCTT+AGG + chr6_3:2107744-2107763 Msa0933580:intron 35.0%
GCTCTTAGGAGATTAGAATT+AGG + chr6_3:2107752-2107771 Msa0933580:intron 35.0%
ACTTTCAGGGTTTGTATGAA+CGG + chr6_3:2107951-2107970 Msa0933580:intron 35.0%
!! GGTTTGGAAGGGTATTTATA+GGG - chr6_3:2108066-2108085 Msa0933590:intron 35.0%
TGGAATGATCCATCAAATTC+CGG - chr6_3:2108228-2108247 Msa0933590:intron 35.0%
AACGTTTGCACTTCTTTGTA+GGG - chr6_3:2108303-2108322 Msa0933590:intron 35.0%
AGTCAATGAAAACGTGTTAG+TGG + chr6_3:2108419-2108438 Msa0933580:intron 35.0%
! AATGACCTAGGACTTGTTTA+AGG - chr6_3:2108444-2108463 Msa0933590:intron 35.0%
! TATAGCCTTAAACAAGTCCT+AGG + chr6_3:2108452-2108471 Msa0933580:intron 35.0%
! ATGATGGTGTTTGTTGAAGA+TGG + chr6_3:2108484-2108503 Msa0933580:intron 35.0%
ATAGGTGAAGTGAAGAATGA+TGG + chr6_3:2108500-2108519 Msa0933580:intron 35.0%
!!! AAGTTTTGTAGGAGTGTTTG+TGG - chr6_3:2108546-2108565 Msa0933590:intron 35.0%
GTGTCTTTCTTTGATGTCAA+AGG + chr6_3:2108655-2108674 Msa0933580:intron 35.0%
! ACAAAAAAGCGTATAGCATC+TGG - chr6_3:2108673-2108692 Msa0933590:intron 35.0%
CGACGAAAATTGAAGAAAAG+TGG + chr6_3:2108729-2108748 Msa0933580:intron 35.0%
TAAGCTGAAAAGCAATTGCA+GGG + chr6_3:2108813-2108832 Msa0933580:intron 35.0%
ATAAGCTGAAAAGCAATTGC+AGG + chr6_3:2108814-2108833 Msa0933580:intron 35.0%
!! CAATTGCTTTTCAGCTTATG+CGG - chr6_3:2108815-2108834 Msa0933590:intron 35.0%
!! AATTGCTTTTCAGCTTATGC+GGG - chr6_3:2108816-2108835 Msa0933590:intron 35.0%
AGTTTCCGGATTATACAATC+CGG + chr6_3:2108910-2108929 Msa0933580:intron 35.0%
GACAAGATTGTTAGAGTTTC+CGG + chr6_3:2108924-2108943 Msa0933580:intron 35.0%
GAAACTCTAACAATCTTGTC+CGG - chr6_3:2108924-2108943 Msa0933590:intron 35.0%
! GGAGAATAGCAGTTTTCATT+AGG + chr6_3:2109099-2109118 Msa0933580:intron 35.0%
! ATTTTTGTCAGTTCATGTGG+GGG + chr6_3:2109139-2109158 Msa0933580:intron 35.0%
GAACATGAGTTAAGTCACAT+AGG - chr6_3:2109219-2109238 Msa0933590:intron 35.0%
CAACATGAGTTAACTCATGT+TGG + chr6_3:2109250-2109269 Msa0933580:intron 35.0%
CAACATGAGTTAACTCATGT+TGG - chr6_3:2109250-2109269 Msa0933590:intron 35.0%
AGTATACATACCACCATTCT+TGG + chr6_3:2105449-2105468 Msa0933580:intron 35.0%
ACTATGATGCAAAAGTCTCA+TGG - chr6_3:2109899-2109918 Msa0933590:intron 35.0%
CTATGATGCAAAAGTCTCAT+GGG - chr6_3:2109900-2109919 Msa0933590:intron 35.0%
GGAAATACATCAAATCCACT+TGG - chr6_3:2105696-2105715 Msa0933590:intron 35.0%
!! ATTCTAGGACTAAACACTCT+AGG - chr6_3:2110234-2110253 Msa0933590:intron 35.0%
!! TCGTATTGACTTTGCATCTA+GGG - chr6_3:2105785-2105804 Msa0933590:intron 35.0%
! TAAGAATCTCAGTAGCTCTA+GGG + chr6_3:2105833-2105852 Msa0933580:intron 35.0%
ATAAGAATCTCAGTAGCTCT+AGG + chr6_3:2105834-2105853 Msa0933580:intron 35.0%
! TGAGATTCTTATAGTGTTGG+AGG - chr6_3:2105842-2105861 Msa0933590:intron 35.0%
! GAGATTCTTATAGTGTTGGA+GGG - chr6_3:2105843-2105862 Msa0933590:intron 35.0%
! TTTGTGATGAGACTGTTTTC+TGG + chr6_3:2110384-2110403 Msa0933580:intron 35.0%
TTTCAATTGAATGTGGGGTA+TGG - chr6_3:2110453-2110472 Msa0933590:intron 35.0%
ATTGTCCACTTGAAAAGCTT+TGG + chr6_3:2110583-2110602 Msa0933580:intron 35.0%
TCAAGTGGACAATAACATAG+TGG - chr6_3:2110590-2110609 Msa0933590:intron 35.0%
ACATGATGCTAAAGCCAAGA+AGG + chr6_3:2105371-2105390 Msa0933580:intron 40.0%
! CAAAAGTCTTGTAAAGGGCT+GGG + chr6_3:2105409-2105428 Msa0933580:intron 40.0%
! ACAAAAGTCTTGTAAAGGGC+TGG + chr6_3:2105410-2105429 Msa0933580:intron 40.0%
! CCCTTTACAAGACTTTTGTG+TGG - chr6_3:2105411-2105430 Msa0933590:CDS 40.0%
! GCCACACAAAAGTCTTGTAA+AGG + chr6_3:2105415-2105434 Msa0933580:intron 40.0%
TGTGAATGGCAAATTCTGCA+AGG - chr6_3:2105626-2105645 Msa0933590:intron 40.0%
!! TCATTTGCTGTAGCAAGCTT+TGG + chr6_3:2105654-2105673 Msa0933580:intron 40.0%
TTCTTCTTCTCGGTGAAAGA+AGG - chr6_3:2105675-2105694 Msa0933590:intron 40.0%
ACTTGGTTCAAAAGTGACAC+CGG - chr6_3:2105713-2105732 Msa0933590:intron 40.0%
!! CTCGTATTGACTTTGCATCT+AGG - chr6_3:2105784-2105803 Msa0933590:intron 40.0%
!! CGTATTGACTTTGCATCTAG+GGG - chr6_3:2105786-2105805 Msa0933590:intron 40.0%
!! TTGGAAGGTACTCTCTATGT+CGG - chr6_3:2105858-2105877 Msa0933590:intron 40.0%
! TTTGTGATGAGACGGTTTTC+TGG + chr6_3:2105900-2105919 Msa0933580:intron 40.0%
GACGTGTTTGTGTTTCCAAT+TGG - chr6_3:2105936-2105955 Msa0933590:intron 40.0%
TGAAAGTGGATGAGACCAAT+TGG + chr6_3:2105954-2105973 Msa0933580:intron 40.0%
GAATGTTGGGTATGGAAATG+CGG - chr6_3:2105977-2105996 Msa0933590:intron 40.0%
TCTAACCAAAGCTTTCCAAG+TGG - chr6_3:2106091-2106110 Msa0933590:intron 40.0%
ATTGTCCACTTGGAAAGCTT+TGG + chr6_3:2106099-2106118 Msa0933580:intron 40.0%
CCACTATGTTATTGTCCACT+TGG + chr6_3:2106109-2106128 Msa0933580:intron 40.0%
CCAAGTGGACAATAACATAG+TGG - chr6_3:2106106-2106125 Msa0933590:intron 40.0%
ACAAAGCATAGAGGATACAG+CGG - chr6_3:2106631-2106650 Msa0933590:intron 40.0%
!! GGAGGAGAAAAAGTACTAGA+TGG + chr6_3:2106709-2106728 Msa0933580:intron 40.0%
AATTGGCTACATAGTGACGT+TGG - chr6_3:2107220-2107239 Msa0933590:intron 40.0%
!! GTATTACTTTTCCCACCCTA+TGG - chr6_3:2107395-2107414 Msa0933590:intron 40.0%
! TTCCAATTTTACCCCTTGTC+CGG - chr6_3:2107441-2107460 Msa0933590:intron 40.0%
AAATTCCGGATTACGGAATC+CGG + chr6_3:2107463-2107482 Msa0933580:intron 40.0%
CATAGCAGTAACTTGGCTAT+TGG - chr6_3:2107795-2107814 Msa0933590:intron 40.0%
GTTTGTATGAACGGTCAATG+AGG + chr6_3:2107942-2107961 Msa0933580:intron 40.0%
! AACCCTGAAAGTTTTCAACG+AGG - chr6_3:2107959-2107978 Msa0933590:intron 40.0%
!! CGTTGGCCTTTCATAGATAA+GGG + chr6_3:2107985-2108004 Msa0933580:intron 40.0%
!! TCGTTGGCCTTTCATAGATA+AGG + chr6_3:2107986-2108005 Msa0933580:intron 40.0%
TATCTATGAAAGGCCAACGA+TGG - chr6_3:2107986-2108005 Msa0933590:intron 40.0%
TGGAAAACCATGGTTGTAGA+AGG - chr6_3:2108006-2108025 Msa0933590:intron 40.0%
TCTTCTTCCTTCTACAACCA+TGG + chr6_3:2108016-2108035 Msa0933580:intron 40.0%
ATGGTTGTAGAAGGAAGAAG+AGG - chr6_3:2108015-2108034 Msa0933590:intron 40.0%
!! GGGTTTGGAAGGGTATTTAT+AGG - chr6_3:2108065-2108084 Msa0933590:intron 40.0%
!! TTGGAAGGGTATTTATAGGG+AGG - chr6_3:2108069-2108088 Msa0933590:intron 40.0%
!! TGGAAGGGTATTTATAGGGA+GGG - chr6_3:2108070-2108089 Msa0933590:intron 40.0%
ACCACAGTAAAAAACGTGTG+TGG - chr6_3:2108161-2108180 Msa0933590:intron 40.0%
!! TTTCCGGATTAGTGCGATTA+TGG - chr6_3:2108258-2108277 Msa0933590:intron 40.0%
GAACGTTTGCACTTCTTTGT+AGG - chr6_3:2108302-2108321 Msa0933590:intron 40.0%
ACATTCCGGATTGTATAACC+CGG - chr6_3:2108332-2108351 Msa0933590:intron 40.0%
!! GAAAGAGTGCCATCAATTAG+TGG - chr6_3:2108379-2108398 Msa0933590:intron 40.0%
AATTGCAGGGTTCATAGGAA+CGG + chr6_3:2108590-2108609 Msa0933580:intron 40.0%
AATGCAATTGCAGGGTTCAT+AGG + chr6_3:2108595-2108614 Msa0933580:intron 40.0%
AATTGCATTGCAGCTTGTGT+GGG - chr6_3:2108606-2108625 Msa0933590:intron 40.0%
CTTGTGTGGGGTTCATATAA+CGG - chr6_3:2108619-2108638 Msa0933590:intron 40.0%
AAAAGTGGTGAAGTGTGTTC+CGG + chr6_3:2108714-2108733 Msa0933580:intron 40.0%
! TTACGAGATTTGTGGTGTCA+TGG - chr6_3:2108764-2108783 Msa0933590:intron 40.0%
AAGCTGAAAAGCAATTGCAG+GGG + chr6_3:2108812-2108831 Msa0933580:intron 40.0%
!! ATTGCTTTTCAGCTTATGCG+GGG - chr6_3:2108817-2108836 Msa0933590:intron 40.0%
ATATGCCTATCGAATTGGTC+CGG - chr6_3:2108888-2108907 Msa0933590:intron 40.0%
TTGGTCCGGATTGTATAATC+CGG - chr6_3:2108902-2108921 Msa0933590:intron 40.0%
CTTGTCCGGAAAATGTAATC+CGG - chr6_3:2108938-2108957 Msa0933590:intron 40.0%
TTCCAAAAATACCTCTGGTC+CGG + chr6_3:2108960-2108979 Msa0933580:intron 40.0%
!! GTATTACTTTTCCCACCCTA+TGG + chr6_3:2107395-2107414 Msa0933580:intron 40.0%
TGAGTTTATTTGTGTGAGCC+CGG - chr6_3:2109031-2109050 Msa0933590:intron 40.0%
! ATTTCATGGTTTGGGCCTAT+GGG - chr6_3:2109062-2109081 Msa0933590:intron 40.0%
TAGGCACAAGTAAAACCCAT+AGG + chr6_3:2109080-2109099 Msa0933580:intron 40.0%
! TTTTTGTCAGTTCATGTGGG+GGG + chr6_3:2109138-2109157 Msa0933580:intron 40.0%
! CCACACAAAAGTCTTGTAGA+GGG + chr6_3:2109771-2109790 Msa0933580:intron 40.0%
GCTATCAATGACACCAAGAA+TGG - chr6_3:2109790-2109809 Msa0933590:CDS 40.0%
ATCAATGACACCAAGAATGG+TGG - chr6_3:2109793-2109812 Msa0933590:CDS 40.0%
TGTGAATGGCAAATTCTGCA+AGG - chr6_3:2105626-2105645 Msa0933590:intron 40.0%
! TTCTTCTACTCGGTGAAAGA+AGG - chr6_3:2110159-2110178 Msa0933590:intron 40.0%
ACTTGGTTCAAAAGTGACAC+CGG - chr6_3:2105713-2105732 Msa0933590:intron 40.0%
!! CTCGTATTGACTTTGCATCT+AGG - chr6_3:2105784-2105803 Msa0933590:intron 40.0%
!! CGTATTGACTTTGCATCTAG+GGG - chr6_3:2105786-2105805 Msa0933590:intron 40.0%
!! TTGGAGGGTACTCTTTATGT+CGG - chr6_3:2110342-2110361 Msa0933590:intron 40.0%
GATGTCTTCGTGTTTCCAAT+TGG - chr6_3:2110420-2110439 Msa0933590:intron 40.0%
TGAAAGTGAATGAGGCCAAT+TGG + chr6_3:2110438-2110457 Msa0933580:intron 40.0%
!! TCTCACCAAAGCTTTTCAAG+TGG - chr6_3:2110575-2110594 Msa0933590:intron 40.0%
CTTGTTTGTGACAGCCTTCT+TGG - chr6_3:2105354-2105373 Msa0933590:CDS 45.0%
TTGTAAAGGGCTGGGATCAA+AGG + chr6_3:2105401-2105420 Msa0933580:intron 45.0%
!!! GGTGTCACTTTTGAACCAAG+TGG + chr6_3:2105714-2105733 Msa0933580:intron 45.0%
!! TGGAAGGTACTCTCTATGTC+GGG - chr6_3:2105859-2105878 Msa0933590:intron 45.0%
CAAAGCATAGAGGATACAGC+GGG - chr6_3:2106632-2106651 Msa0933590:intron 45.0%
AAAGCATAGAGGATACAGCG+GGG - chr6_3:2106633-2106652 Msa0933590:intron 45.0%
AATATTTATGTCCAGGCCCG+AGG - chr6_3:2107121-2107140 Msa0933590:intron 45.0%
ATATTTATGTCCAGGCCCGA+GGG - chr6_3:2107122-2107141 Msa0933590:intron 45.0%
TAGTGACGTTGGATCGAGAT+CGG - chr6_3:2107231-2107250 Msa0933590:intron 45.0%
ATCCGGACAAGGGGTAAAAT+TGG + chr6_3:2107446-2107465 Msa0933580:intron 45.0%
ATAGCAGTGGTTAGGCTCTT+AGG + chr6_3:2107766-2107785 Msa0933580:intron 45.0%
CCTAACCACTGCTATGTGAT+CGG - chr6_3:2107771-2107790 Msa0933590:intron 45.0%
TATGTCCGATCACATAGCAG+TGG + chr6_3:2107779-2107798 Msa0933580:intron 45.0%
GATCGGACATAGCAGTAACT+TGG - chr6_3:2107788-2107807 Msa0933590:intron 45.0%
AGCAGTAACTTGGCTATTGG+AGG - chr6_3:2107798-2107817 Msa0933590:intron 45.0%
CTTGGCTATTGGAGGAAAAC+CGG - chr6_3:2107806-2107825 Msa0933590:intron 45.0%
GTATGAACGGTCAATGAGGA+AGG + chr6_3:2107938-2107957 Msa0933580:intron 45.0%
GGCCTCGTTGAAAACTTTCA+GGG + chr6_3:2107964-2107983 Msa0933580:intron 45.0%
ACGAGGCCCTTATCTATGAA+AGG - chr6_3:2107976-2107995 Msa0933590:intron 45.0%
! CAACCATGGTTTTCCATCGT+TGG + chr6_3:2108002-2108021 Msa0933580:intron 45.0%
GTTGTAGAAGGAAGAAGAGG+AGG - chr6_3:2108018-2108037 Msa0933590:intron 45.0%
! AGAAATGGTGGGGTTTGGAA+GGG - chr6_3:2108055-2108074 Msa0933590:intron 45.0%
!! GGAAGGGTATTTATAGGGAG+GGG - chr6_3:2108071-2108090 Msa0933590:intron 45.0%
TGGGTGAAAAACGATTGGGA+AGG - chr6_3:2108094-2108113 Msa0933590:intron 45.0%
!!! GCCACACACGTTTTTTACTG+TGG + chr6_3:2108165-2108184 Msa0933580:intron 45.0%
GCGTTCCGGAATATACAATC+TGG - chr6_3:2108208-2108227 Msa0933590:intron 45.0%
GCACCATAATCGCACTAATC+CGG + chr6_3:2108264-2108283 Msa0933580:intron 45.0%
GTGCGATTATGGTGCTCTTA+TGG - chr6_3:2108269-2108288 Msa0933590:intron 45.0%
GCATTCCGGGTTATACAATC+CGG + chr6_3:2108340-2108359 Msa0933580:intron 45.0%
! AAGCCAATGCTGAAGCATTC+CGG + chr6_3:2108354-2108373 Msa0933580:intron 45.0%
GAGTGCCATCAATTAGTGGT+TGG - chr6_3:2108383-2108402 Msa0933590:intron 45.0%
GCCATCAATTAGTGGTTGGA+CGG - chr6_3:2108387-2108406 Msa0933590:intron 45.0%
ACCGTCCAACCACTAATTGA+TGG + chr6_3:2108391-2108410 Msa0933580:intron 45.0%
!! TAGGAGTGTTTGTGGTGTCA+TGG - chr6_3:2108554-2108573 Msa0933590:intron 45.0%
CAAGCTGCAATGCAATTGCA+GGG + chr6_3:2108603-2108622 Msa0933580:intron 45.0%
ACAAGCTGCAATGCAATTGC+AGG + chr6_3:2108604-2108623 Msa0933580:intron 45.0%
CAATTGCATTGCAGCTTGTG+TGG - chr6_3:2108605-2108624 Msa0933590:intron 45.0%
ATTGCATTGCAGCTTGTGTG+GGG - chr6_3:2108607-2108626 Msa0933590:intron 45.0%
AAAGCGTATAGCATCTGGTC+CGG - chr6_3:2108678-2108697 Msa0933590:intron 45.0%
GTGTTCCGGAAAACAGAATC+CGG + chr6_3:2108700-2108719 Msa0933580:intron 45.0%
!! TTGCTTTTCAGCTTATGCGG+GGG - chr6_3:2108818-2108837 Msa0933590:intron 45.0%
ACAATCCGGACCAATTCGAT+AGG + chr6_3:2108896-2108915 Msa0933580:intron 45.0%
! CTGGTCCGGATTACATTTTC+CGG + chr6_3:2108946-2108965 Msa0933580:intron 45.0%
GAAAATGTAATCCGGACCAG+AGG - chr6_3:2108946-2108965 Msa0933590:intron 45.0%
!!! ATCCGGACCAGAGGTATTTT+TGG - chr6_3:2108955-2108974 Msa0933590:intron 45.0%
GAGTTTATTTGTGTGAGCCC+GGG - chr6_3:2109032-2109051 Msa0933590:intron 45.0%
AGTTTATTTGTGTGAGCCCG+GGG - chr6_3:2109033-2109052 Msa0933590:intron 45.0%
GGGGCTTGATTTCATGGTTT+GGG - chr6_3:2109054-2109073 Msa0933590:intron 45.0%
! GATTTCATGGTTTGGGCCTA+TGG - chr6_3:2109061-2109080 Msa0933590:intron 45.0%
! GGGGGTGAGCAATTTTGTAT+AGG + chr6_3:2109120-2109139 Msa0933580:intron 45.0%
! CAAAAGTCTTGTAGAGGGCT+GGG + chr6_3:2109766-2109785 Msa0933580:intron 45.0%
! ACAAAAGTCTTGTAGAGGGC+TGG + chr6_3:2109767-2109786 Msa0933580:intron 45.0%
! CCCTCTACAAGACTTTTGTG+TGG - chr6_3:2109768-2109787 Msa0933590:CDS 45.0%
! GCCACACAAAAGTCTTGTAG+AGG + chr6_3:2109772-2109791 Msa0933580:intron 45.0%
!!! GGTGTCACTTTTGAACCAAG+TGG + chr6_3:2105714-2105733 Msa0933580:intron 45.0%
!! TGGAGGGTACTCTTTATGTC+GGG - chr6_3:2110343-2110362 Msa0933590:intron 45.0%
!! GTAGCTCTAGGGTGAGTATG+TGG + chr6_3:2105822-2105841 Msa0933580:intron 50.0%
TTGGCTGCTAAGTCCAGCAA+TGG + chr6_3:2106006-2106025 Msa0933580:intron 50.0%
GGACTTAGCAGCCAAAATCC+AGG - chr6_3:2106011-2106030 Msa0933590:intron 50.0%
ACAATGACTCTCATGCCCTC+GGG + chr6_3:2107140-2107159 Msa0933580:intron 50.0%
CACAATGACTCTCATGCCCT+CGG + chr6_3:2107141-2107160 Msa0933580:intron 50.0%
GATTACGGAATCCGGACAAG+GGG + chr6_3:2107455-2107474 Msa0933580:intron 50.0%
GGATTACGGAATCCGGACAA+GGG + chr6_3:2107456-2107475 Msa0933580:intron 50.0%
CTTGTCCGGATTCCGTAATC+CGG - chr6_3:2107455-2107474 Msa0933590:intron 50.0%
CCGATCACATAGCAGTGGTT+AGG + chr6_3:2107774-2107793 Msa0933580:intron 50.0%
TATTGGAGGAAAACCGGAGG+AGG - chr6_3:2107812-2107831 Msa0933590:intron 50.0%
! GTTATTAGCTTCGCCTGCCT+GGG + chr6_3:2107863-2107882 Msa0933580:intron 50.0%
GGTTCATCTGAGGGTCATGT+GGG + chr6_3:2107894-2107913 Msa0933580:intron 50.0%
ACAAAGCGCGGTTCATCTGA+GGG + chr6_3:2107903-2107922 Msa0933580:intron 50.0%
AACAAAGCGCGGTTCATCTG+AGG + chr6_3:2107904-2107923 Msa0933580:intron 50.0%
GGGCCTCGTTGAAAACTTTC+AGG + chr6_3:2107965-2107984 Msa0933580:intron 50.0%
AGGCCAACGATGGAAAACCA+TGG - chr6_3:2107996-2108015 Msa0933590:intron 50.0%
AGAAGGAAGAAGAGGAGGAG+AGG - chr6_3:2108023-2108042 Msa0933590:intron 50.0%
GAAGGAAGAAGAGGAGGAGA+GGG - chr6_3:2108024-2108043 Msa0933590:intron 50.0%
GAGAGGGATGGTGTGAGAAA+TGG - chr6_3:2108040-2108059 Msa0933590:intron 50.0%
AGGGATGGTGTGAGAAATGG+TGG - chr6_3:2108043-2108062 Msa0933590:intron 50.0%
GGGATGGTGTGAGAAATGGT+GGG - chr6_3:2108044-2108063 Msa0933590:intron 50.0%
GGATGGTGTGAGAAATGGTG+GGG - chr6_3:2108045-2108064 Msa0933590:intron 50.0%
! GTGTGAGAAATGGTGGGGTT+TGG - chr6_3:2108050-2108069 Msa0933590:intron 50.0%
! GAGAAATGGTGGGGTTTGGA+AGG - chr6_3:2108054-2108073 Msa0933590:intron 50.0%
! AGGGTATTTATAGGGAGGGG+TGG - chr6_3:2108074-2108093 Msa0933590:intron 50.0%
GGGTATTTATAGGGAGGGGT+GGG - chr6_3:2108075-2108094 Msa0933590:intron 50.0%
AGGGGTGGGTGAAAAACGAT+TGG - chr6_3:2108089-2108108 Msa0933590:intron 50.0%
GGGGTGGGTGAAAAACGATT+GGG - chr6_3:2108090-2108109 Msa0933590:intron 50.0%
TGGTGCTCTTATGGTGAACG+AGG - chr6_3:2108278-2108297 Msa0933590:intron 50.0%
GGTGCTCTTATGGTGAACGA+GGG - chr6_3:2108279-2108298 Msa0933590:intron 50.0%
GTGCTCTTATGGTGAACGAG+GGG - chr6_3:2108280-2108299 Msa0933590:intron 50.0%
TGCACTTCTTTGTAGGGCGA+AGG - chr6_3:2108309-2108328 Msa0933590:intron 50.0%
TTGTAGGGCGAAGGACATTC+CGG - chr6_3:2108318-2108337 Msa0933590:intron 50.0%
AACCCGGAATGCTTCAGCAT+TGG - chr6_3:2108348-2108367 Msa0933590:intron 50.0%
! AGCCAATGCTGAAGCATTCC+GGG + chr6_3:2108353-2108372 Msa0933580:intron 50.0%
! CTGGTCCGGATTCTGTTTTC+CGG - chr6_3:2108692-2108711 Msa0933590:intron 50.0%
AATTGCAGGGGTCGTATGAG+CGG + chr6_3:2108800-2108819 Msa0933580:intron 50.0%
CTTATGCGGGGGTCGTATAA+CGG - chr6_3:2108829-2108848 Msa0933590:intron 50.0%
GTTTATTTGTGTGAGCCCGG+GGG - chr6_3:2109034-2109053 Msa0933590:intron 50.0%
TTTATTTGTGTGAGCCCGGG+GGG - chr6_3:2109035-2109054 Msa0933590:intron 50.0%
AACCATGAAATCAAGCCCCC+CGG + chr6_3:2109053-2109072 Msa0933580:intron 50.0%
GGGGGCTTGATTTCATGGTT+TGG - chr6_3:2109053-2109072 Msa0933590:intron 50.0%
TTGTAGAGGGCTGGGATCAA+AGG + chr6_3:2109758-2109777 Msa0933580:intron 50.0%
!! CTCTAGGGTGAGTATGTGGA+GGG + chr6_3:2105818-2105837 Msa0933580:intron 50.0%
!! GTAGCTCTAGGGTGAGTATG+TGG + chr6_3:2105822-2105841 Msa0933580:intron 50.0%
GGAAATGCAGTTGCCATTGC+TGG - chr6_3:2110474-2110493 Msa0933590:intron 50.0%
TTGGCTGCTAAGTCCAGCAA+TGG + chr6_3:2106006-2106025 Msa0933580:intron 50.0%
GGACTTAGCAGCCAAAATCC+AGG - chr6_3:2106011-2106030 Msa0933590:intron 50.0%
AGGGCTGGGATCAAAGGCAA+AGG + chr6_3:2105395-2105414 Msa0933580:intron 55.0%
!! GCTCTAGGGTGAGTATGTGG+AGG + chr6_3:2105819-2105838 Msa0933580:intron 55.0%
GGAAATGCGGTTGCCATTGC+TGG - chr6_3:2105990-2106009 Msa0933590:intron 55.0%
! CGAGGGCATGAGAGTCATTG+TGG - chr6_3:2107139-2107158 Msa0933590:intron 55.0%
GGAAAAAAATAGGGCGCGCG+AGG + chr6_3:2107425-2107444 Msa0933580:intron 55.0%
CGGATTACGGAATCCGGACA+AGG + chr6_3:2107457-2107476 Msa0933580:intron 55.0%
GGCTATTGGAGGAAAACCGG+AGG - chr6_3:2107809-2107828 Msa0933590:intron 55.0%
! GGTTATTAGCTTCGCCTGCC+TGG + chr6_3:2107864-2107883 Msa0933580:intron 55.0%
CGGTTCATCTGAGGGTCATG+TGG + chr6_3:2107895-2107914 Msa0933580:intron 55.0%
GAAGAAGAGGAGGAGAGGGA+TGG - chr6_3:2108028-2108047 Msa0933590:intron 55.0%
AAACGTGTGTGGCAGACCAC+CGG - chr6_3:2108172-2108191 Msa0933590:intron 55.0%
ACCATGAAATCAAGCCCCCC+GGG + chr6_3:2109052-2109071 Msa0933580:intron 55.0%
AGGGCTGGGATCAAAGGCAA+AGG + chr6_3:2105395-2105414 Msa0933580:intron 55.0%
!! GCTCTAGGGTGAGTATGTGG+AGG + chr6_3:2105819-2105838 Msa0933580:intron 55.0%
CGCGAGGAAAGCCATAGGGT+GGG + chr6_3:2107409-2107428 Msa0933580:intron 60.0%
TGGAGGAAAACCGGAGGAGG+AGG - chr6_3:2107815-2107834 Msa0933590:intron 60.0%
GGAGGAAAACCGGAGGAGGA+GGG - chr6_3:2107816-2107835 Msa0933590:intron 60.0%
AAACCGGAGGAGGAGGGAAG+AGG - chr6_3:2107822-2107841 Msa0933590:intron 60.0%
AACCGGAGGAGGAGGGAAGA+GGG - chr6_3:2107823-2107842 Msa0933590:intron 60.0%
GAGGGTCATGTGGGTCAGTG+TGG + chr6_3:2107885-2107904 Msa0933580:intron 60.0%
! AACCGCGCTTTGTTGCAGCG+CGG - chr6_3:2107910-2107929 Msa0933590:intron 60.0%
AACCGCGCTGCAACAAAGCG+CGG + chr6_3:2107915-2107934 Msa0933580:intron 60.0%
! TTTTTACAGGGCGCGCGACG+AGG - chr6_3:2108980-2108999 Msa0933590:intron 60.0%
GCGCGAGGAAAGCCATAGGG+TGG + chr6_3:2107410-2107429 Msa0933580:intron 65.0%
GGCGCGCGAGGAAAGCCATA+GGG + chr6_3:2107413-2107432 Msa0933580:intron 65.0%
CACCCTCTTCCCTCCTCCTC+CGG + chr6_3:2107828-2107847 Msa0933580:intron 65.0%
GGGTGCTCACACTTACGCCC+AGG - chr6_3:2107843-2107862 Msa0933590:intron 65.0%
GCTCACACTTACGCCCAGGC+AGG - chr6_3:2107847-2107866 Msa0933590:intron 65.0%
GAACGCCTCAGTGCCATGGC+CGG + chr6_3:2108194-2108213 Msa0933580:intron 65.0%
! GCCATGGCACTGAGGCGTTC+CGG - chr6_3:2108194-2108213 Msa0933590:intron 65.0%
TCCGGAACGCCTCAGTGCCA+TGG + chr6_3:2108198-2108217 Msa0933580:intron 65.0%
GCCCGGGGGGCTTGATTTCA+TGG - chr6_3:2109048-2109067 Msa0933590:intron 65.0%
GACTCTCATGCCCTCGGGCC+TGG + chr6_3:2107135-2107154 Msa0933580:intron 70.0%
GGGCGCGCGAGGAAAGCCAT+AGG + chr6_3:2107414-2107433 Msa0933580:intron 70.0%
GTGTGGCAGACCACCGGCCA+TGG - chr6_3:2108178-2108197 Msa0933590:intron 70.0%
GACCACCGGCCATGGCACTG+AGG - chr6_3:2108186-2108205 Msa0933590:intron 70.0%
GCGCGACGAGGCCATAGGGT+GGG - chr6_3:2108992-2109011 Msa0933590:intron 70.0%
CGCCTCAGTGCCATGGCCGG+TGG + chr6_3:2108191-2108210 Msa0933580:intron 75.0%
AGGGCGCGCGACGAGGCCAT+AGG - chr6_3:2108987-2109006 Msa0933590:intron 75.0%
GGGCGCGCGACGAGGCCATA+GGG - chr6_3:2108988-2109007 Msa0933590:intron 75.0%
CGCGCGACGAGGCCATAGGG+TGG - chr6_3:2108991-2109010 Msa0933590:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 2105055 2110650 2105055 ID=Msa0933590;Name=Msa0933590
chr6_3 mRNA 2105055 2110650 2105055 ID=Msa0933590-mRNA-1;Parent=Msa0933590;Name=Msa0933590-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0|0|0.8|0|0.2|5|0|308
chr6_3 exon 2110645 2110650 2110645 ID=Msa0933590-mRNA-1:exon:888;Parent=Msa0933590-mRNA-1
chr6_3 exon 2109934 2110057 2109934 ID=Msa0933590-mRNA-1:exon:887;Parent=Msa0933590-mRNA-1
chr6_3 exon 2109596 2109840 2109596 ID=Msa0933590-mRNA-1:exon:886;Parent=Msa0933590-mRNA-1
chr6_3 exon 2105891 2105897 2105891 ID=Msa0933590-mRNA-1:exon:885;Parent=Msa0933590-mRNA-1
chr6_3 exon 2105055 2105599 2105055 ID=Msa0933590-mRNA-1:exon:884;Parent=Msa0933590-mRNA-1
chr6_3 CDS 2110645 2110650 2110645 ID=Msa0933590-mRNA-1:cds;Parent=Msa0933590-mRNA-1
chr6_3 CDS 2109934 2110057 2109934 ID=Msa0933590-mRNA-1:cds;Parent=Msa0933590-mRNA-1
chr6_3 CDS 2109596 2109840 2109596 ID=Msa0933590-mRNA-1:cds;Parent=Msa0933590-mRNA-1
chr6_3 CDS 2105891 2105897 2105891 ID=Msa0933590-mRNA-1:cds;Parent=Msa0933590-mRNA-1
chr6_3 CDS 2105055 2105599 2105055 ID=Msa0933590-mRNA-1:cds;Parent=Msa0933590-mRNA-1
Gene Sequence

>Msa0933590

ATGAGTGATCCAAAGCTTGCTACAGCAAATGATTTCTTCTTCTCGGTGAAAGAAGGAAATACATCAAATCCACTTGGTTCAAAAGTGACACCGGTTACTGTTAATGAGATACTAGGACTAAACACTCAAGGTACTCTCTATGTCGGGTTTGTTACTTCTAATCCAGAAAACCGTCTCATCACAAAAGTACTCAACAAAGGAGACGTGTTTGTGTTTCCAATTGGTCTCATCCACTTTCAATTGAATGTTGGGTATGGAAATGCGGTTGCCATTGCTGGACTTAGCAGCCAAAATCCAGGTGTAATCACAATTGCTAATGCTGTATTTGGGTCTAATCCAAAAATTTCTTCAGAAGTTCTAACCAAAGCTTTCCAAAATGGTGTTTTTGTGAATGGCAAATTCTGCAAGGATTCAAAGCTTGCTACAGCAAATGATTTCTTCTACTCGGTGAAAGAAGGAAATACATCAAATCCACTTGGTTCAAAAGTGACACCGGTTACTGTTAATGAAATTCTAGGACTAAACACTCTAGGTATCTCTCTTGCTCGTATTGACTTTGCATCTAGGGGACTAAACCCTCCACATACTCACCCTAGAGCTACTGAGATTCTTATAGTGTTGGAGGGTACTCTTTATGTCGGGTTTGTTACTTCTAATCCAGAAAACAGTCTCATCACAAAAGTACTCAACAAAGGAGATGTCTTCGTGTTTCCAATTGGCCTCATTCACTTTCAATTGAATGTGGGGTATGGAAATGCAGTTGCCATTGCTGGACTTAGCAGCCAAAATCCAGGTGTTATTACTATTGCTAATGCTGTATTTGGATCGAATCCAAAAATCTCTTCAGAAGTTCTCACCAAAGCTTTTCAAGTGGACAATAACATAGTGGACAATCTTCAAAAACAATTTTGGGTGGACAACAACTAG

Protein sequence

>Msa0933590

MSDPKLATANDFFFSVKEGNTSNPLGSKVTPVTVNEILGLNTQGTLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQNGVFVNGKFCKDSKLATANDFFYSVKEGNTSNPLGSKVTPVTVNEILGLNTLGISLARIDFASRGLNPPHTHPRATEILIVLEGTLYVGFVTSNPENSLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQFWVDNN*