Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1370210 | Msa1404000 | 0.811563 | 6.575985e-51 | -8.615850e-47 |
| Msa1370210 | Msa1415310 | 0.811849 | 5.699500e-51 | -8.615850e-47 |
| Msa1370210 | Msa1433120 | 0.808810 | 2.578843e-50 | -8.615850e-47 |
| Msa0726140 | Msa1370210 | 0.812452 | 4.210452e-51 | -8.615850e-47 |
| Msa0733290 | Msa1370210 | 0.808169 | 3.535139e-50 | -8.615850e-47 |
| Msa0743810 | Msa1370210 | 0.805006 | 1.643770e-49 | -8.615850e-47 |
| Msa0745060 | Msa1370210 | 0.832337 | 1.001120e-55 | -8.615850e-47 |
| Msa0777870 | Msa1370210 | 0.804829 | 1.790041e-49 | -8.615850e-47 |
| Msa0783160 | Msa1370210 | 0.817351 | 3.449764e-52 | -8.615850e-47 |
| Msa0825860 | Msa1370210 | 0.834530 | 2.842335e-56 | -8.615850e-47 |
| Msa1230430 | Msa1370210 | 0.808959 | 2.397200e-50 | -8.615850e-47 |
| Msa1269670 | Msa1370210 | 0.842408 | 2.634005e-58 | -8.615850e-47 |
| Msa1270230 | Msa1370210 | 0.821120 | 4.779524e-53 | -8.615850e-47 |
| Msa1270240 | Msa1370210 | 0.843017 | 1.814466e-58 | -8.615850e-47 |
| Msa1270270 | Msa1370210 | 0.815585 | 8.574359e-52 | -8.615850e-47 |
| Msa1273230 | Msa1370210 | 0.810643 | 1.040946e-50 | -8.615850e-47 |
| Msa1283330 | Msa1370210 | 0.832266 | 1.042420e-55 | -8.615850e-47 |
| Msa1285930 | Msa1370210 | 0.819636 | 1.046735e-52 | -8.615850e-47 |
| Msa1287800 | Msa1370210 | 0.801651 | 8.143276e-49 | -8.615850e-47 |
| Msa1287810 | Msa1370210 | 0.815869 | 7.410962e-52 | -8.615850e-47 |
| Msa1297210 | Msa1370210 | 0.810447 | 1.147658e-50 | -8.615850e-47 |
| Msa1342200 | Msa1370210 | 0.802105 | 6.568475e-49 | -8.615850e-47 |
| Msa0365500 | Msa1370210 | 0.811277 | 7.585881e-51 | -8.615850e-47 |
| Msa0384800 | Msa1370210 | 0.809508 | 1.827633e-50 | -8.615850e-47 |
| Msa0384890 | Msa1370210 | 0.800040 | 1.736255e-48 | -8.615850e-47 |
| Msa0406120 | Msa1370210 | 0.829904 | 3.964328e-55 | -8.615850e-47 |
| Msa0414420 | Msa1370210 | 0.805134 | 1.545701e-49 | -8.615850e-47 |
| Msa0452900 | Msa1370210 | 0.833662 | 4.690083e-56 | -8.615850e-47 |
| Msa0454910 | Msa1370210 | 0.805763 | 1.140940e-49 | -8.615850e-47 |
| Msa1016280 | Msa1370210 | 0.816880 | 4.401006e-52 | -8.615850e-47 |
| Msa1025360 | Msa1370210 | 0.826828 | 2.189301e-54 | -8.615850e-47 |
| Msa1025370 | Msa1370210 | 0.837033 | 6.600283e-57 | -8.615850e-47 |
| Msa1044830 | Msa1370210 | 0.843376 | 1.455971e-58 | -8.615850e-47 |
| Msa1044840 | Msa1370210 | 0.831796 | 1.362354e-55 | -8.615850e-47 |
| Msa1092990 | Msa1370210 | 0.802059 | 6.713020e-49 | -8.615850e-47 |
| Msa1100980 | Msa1370210 | 0.851223 | 1.020644e-60 | -8.615850e-47 |
| Msa0267000 | Msa1370210 | 0.835034 | 2.121935e-56 | -8.615850e-47 |
| Msa0267010 | Msa1370210 | 0.823960 | 1.045470e-53 | -8.615850e-47 |
| Msa0360510 | Msa1370210 | 0.801898 | 7.246481e-49 | -8.615850e-47 |
| Msa1109440 | Msa1370210 | 0.819604 | 1.064181e-52 | -8.615850e-47 |
| Msa1135740 | Msa1370210 | 0.832703 | 8.123719e-56 | -8.615850e-47 |
| Msa1136090 | Msa1370210 | 0.810384 | 1.183963e-50 | -8.615850e-47 |
| Msa1173920 | Msa1370210 | 0.813034 | 3.139845e-51 | -8.615850e-47 |
| Msa1187940 | Msa1370210 | 0.809933 | 1.481145e-50 | -8.615850e-47 |
| Msa1187950 | Msa1370210 | 0.805064 | 1.598314e-49 | -8.615850e-47 |
| Msa1192640 | Msa1370210 | 0.815035 | 1.136054e-51 | -8.615850e-47 |
| Msa0564890 | Msa1370210 | 0.804612 | 1.986858e-49 | -8.615850e-47 |
| Msa0865320 | Msa1370210 | 0.839937 | 1.175180e-57 | -8.615850e-47 |
| Msa0885280 | Msa1370210 | 0.813711 | 2.228620e-51 | -8.615850e-47 |
| Msa0885290 | Msa1370210 | 0.822956 | 1.795021e-53 | -8.615850e-47 |
| Msa0888370 | Msa1370210 | 0.811360 | 7.279512e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 11 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAATAGGTTTACACTTT+TGG | 0.189771 | tig0019103:+1547 | Msa1370210:five_prime_UTR |
| TGTAAACCTATTAAAGAAAA+TGG | 0.246709 | tig0019103:-1540 | Msa1370210:intergenic |
| TCTACGGTGTGTGAACTTAC+AGG | 0.303289 | tig0019103:-2770 | Msa1370210:intergenic |
| TCCACGGTGTGTGAACTTAC+AGG | 0.384784 | tig0019103:-2797 | Msa1370210:intergenic |
| GGGTTGAAACTGCTCAGTTC+AGG | 0.385105 | tig0019103:+1594 | Msa1370210:CDS |
| AGCAGTTTCAACCCCGGCCA+TGG | 0.495635 | tig0019103:-1585 | Msa1370210:intergenic |
| ACTGCAATTTGTGAATGATT+CGG | 0.531479 | tig0019103:+2736 | Msa1370210:CDS |
| TAACATGATATGAATGTCCA+CGG | 0.623472 | tig0019103:-2813 | Msa1370210:intergenic |
| TCCTGTAAGTTCACACACCG+TGG | 0.645220 | tig0019103:+2796 | Msa1370210:CDS |
| TGAACTTACAGGATTGTCTA+CGG | 0.659877 | tig0019103:-2786 | Msa1370200:intergenic |
| GAACTGAGCAGTTTCAACCC+CGG | 0.704213 | tig0019103:-1591 | Msa1370200:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCCAATAAAAATTTTAATAT+CGG | - | tig0019103:1666-1685 | Msa1370210:intergenic | 10.0% |
| !! | AATTATATATGAAAACATTA+TGG | + | tig0019103:1717-1736 | Msa1370210:intron | 10.0% |
| !!! | TCCAATAAAAATTTTAATAT+CGG | - | tig0019103:1666-1685 | Msa1370210:intergenic | 10.0% |
| !! | AATTATATATGAAAACATTA+TGG | + | tig0019103:1717-1736 | Msa1370210:intron | 10.0% |
| !!! | AATTTTAATATCGGTTAAAA+TGG | - | tig0019103:1657-1676 | Msa1370210:intergenic | 15.0% |
| !!! | ACCGATATTAAAATTTTTAT+TGG | + | tig0019103:1662-1681 | Msa1370210:intron | 15.0% |
| !! | ATATAATTCATAAATTGCTT+TGG | - | tig0019103:2323-2342 | Msa1370210:intergenic | 15.0% |
| !! | AAGCAATTTATGAATTATAT+TGG | + | tig0019103:2323-2342 | Msa1370210:intron | 15.0% |
| !! | AGTATACTTCAAATAAAATA+AGG | - | tig0019103:2684-2703 | Msa1370210:intergenic | 15.0% |
| !!! | AATTTTAATATCGGTTAAAA+TGG | - | tig0019103:1657-1676 | Msa1370210:intergenic | 15.0% |
| !!! | ACCGATATTAAAATTTTTAT+TGG | + | tig0019103:1662-1681 | Msa1370210:intron | 15.0% |
| !! | ATATAATTCATAAATTGCTT+TGG | - | tig0019103:2323-2342 | Msa1370210:intergenic | 15.0% |
| !! | AAGCAATTTATGAATTATAT+TGG | + | tig0019103:2323-2342 | Msa1370210:intron | 15.0% |
| !! | AGTATACTTCAAATAAAATA+AGG | - | tig0019103:2684-2703 | Msa1370210:intergenic | 15.0% |
| !!! | ATTGATCCATTTTCTTTAAT+AGG | + | tig0019103:1534-1553 | Msa1370210:five_prime_UTR | 20.0% |
| !! | TGTAAACCTATTAAAGAAAA+TGG | - | tig0019103:1543-1562 | Msa1370210:intergenic | 20.0% |
| !! | TAGTATAACAATCTGTTATT+TGG | + | tig0019103:1740-1759 | Msa1370210:intron | 20.0% |
| !! | TGTAATTCTCTATAGAAAAA+TGG | + | tig0019103:2367-2386 | Msa1370210:intron | 20.0% |
| !! | TTCTCATTGTATACAATATT+AGG | - | tig0019103:2481-2500 | Msa1370210:intergenic | 20.0% |
| !!! | ATTGATCCATTTTCTTTAAT+AGG | + | tig0019103:1534-1553 | Msa1370210:five_prime_UTR | 20.0% |
| !! | TGTAAACCTATTAAAGAAAA+TGG | - | tig0019103:1543-1562 | Msa1370210:intergenic | 20.0% |
| !! | TAGTATAACAATCTGTTATT+TGG | + | tig0019103:1740-1759 | Msa1370210:intron | 20.0% |
| !! | TGTAATTCTCTATAGAAAAA+TGG | + | tig0019103:2367-2386 | Msa1370210:intron | 20.0% |
| !! | TTCTCATTGTATACAATATT+AGG | - | tig0019103:2481-2500 | Msa1370210:intergenic | 20.0% |
| !! | CTTTAATAGGTTTACACTTT+TGG | + | tig0019103:1547-1566 | Msa1370210:five_prime_UTR | 25.0% |
| !! | TGTTATTTGGCATTGTAATA+TGG | + | tig0019103:1753-1772 | Msa1370210:intron | 25.0% |
| ! | AGACAATAATACTTCCTTTA+AGG | + | tig0019103:1778-1797 | Msa1370210:intron | 25.0% |
| ! | GACAATAATACTTCCTTTAA+GGG | + | tig0019103:1779-1798 | Msa1370210:intron | 25.0% |
| ! | ATGTGCTAATTATAAGAATG+TGG | - | tig0019103:2649-2668 | Msa1370210:intergenic | 25.0% |
| !! | CTTTAATAGGTTTACACTTT+TGG | + | tig0019103:1547-1566 | Msa1370210:five_prime_UTR | 25.0% |
| !! | TGTTATTTGGCATTGTAATA+TGG | + | tig0019103:1753-1772 | Msa1370210:intron | 25.0% |
| ! | AGACAATAATACTTCCTTTA+AGG | + | tig0019103:1778-1797 | Msa1370210:intron | 25.0% |
| ! | GACAATAATACTTCCTTTAA+GGG | + | tig0019103:1779-1798 | Msa1370210:intron | 25.0% |
| ! | ATGTGCTAATTATAAGAATG+TGG | - | tig0019103:2649-2668 | Msa1370210:intergenic | 25.0% |
| ! | TAATACTTCCTTTAAGGGAA+AGG | + | tig0019103:1784-1803 | Msa1370210:intron | 30.0% |
| AACTGTCTATTGTTGCTATA+AGG | - | tig0019103:1850-1869 | Msa1370210:intergenic | 30.0% | |
| ! | TTTTGTTCCTTACGAAATTG+AGG | + | tig0019103:2170-2189 | Msa1370210:intron | 30.0% |
| TTTGTTCCTTACGAAATTGA+GGG | + | tig0019103:2171-2190 | Msa1370210:intron | 30.0% | |
| TGTAACTTTCTGTCATTCAA+TGG | + | tig0019103:2228-2247 | Msa1370210:intron | 30.0% | |
| TCAACACATCTCATTATGAA+AGG | - | tig0019103:2285-2304 | Msa1370210:intergenic | 30.0% | |
| CATATGCAATAAATACGAAG+CGG | - | tig0019103:2413-2432 | Msa1370210:intergenic | 30.0% | |
| ! | TCTCTCTTCTTTGTTTAGTT+TGG | + | tig0019103:2502-2521 | Msa1370210:intron | 30.0% |
| ! | TTTTTCTTCTAGATATGACG+AGG | + | tig0019103:2556-2575 | Msa1370210:intron | 30.0% |
| TTAATATCAGACACACTCAT+AGG | - | tig0019103:2607-2626 | Msa1370210:intergenic | 30.0% | |
| AGTGTGTCTGATATTAAGTA+TGG | + | tig0019103:2610-2629 | Msa1370210:intron | 30.0% | |
| ACTGCAATTTGTGAATGATT+CGG | + | tig0019103:2736-2755 | Msa1370210:CDS | 30.0% | |
| TAACATGATATGAATGTCCA+CGG | - | tig0019103:2816-2835 | Msa1370210:intergenic | 30.0% | |
| ! | TAATACTTCCTTTAAGGGAA+AGG | + | tig0019103:1784-1803 | Msa1370210:intron | 30.0% |
| AACTGTCTATTGTTGCTATA+AGG | - | tig0019103:1850-1869 | Msa1370210:intergenic | 30.0% | |
| ! | TTTTGTTCCTTACGAAATTG+AGG | + | tig0019103:2170-2189 | Msa1370210:intron | 30.0% |
| TTTGTTCCTTACGAAATTGA+GGG | + | tig0019103:2171-2190 | Msa1370210:intron | 30.0% | |
| TGTAACTTTCTGTCATTCAA+TGG | + | tig0019103:2228-2247 | Msa1370210:intron | 30.0% | |
| TCAACACATCTCATTATGAA+AGG | - | tig0019103:2285-2304 | Msa1370210:intergenic | 30.0% | |
| CATATGCAATAAATACGAAG+CGG | - | tig0019103:2413-2432 | Msa1370210:intergenic | 30.0% | |
| ! | TCTCTCTTCTTTGTTTAGTT+TGG | + | tig0019103:2502-2521 | Msa1370210:intron | 30.0% |
| ! | TTTTTCTTCTAGATATGACG+AGG | + | tig0019103:2556-2575 | Msa1370210:intron | 30.0% |
| TTAATATCAGACACACTCAT+AGG | - | tig0019103:2607-2626 | Msa1370210:intergenic | 30.0% | |
| AGTGTGTCTGATATTAAGTA+TGG | + | tig0019103:2610-2629 | Msa1370210:intron | 30.0% | |
| ACTGCAATTTGTGAATGATT+CGG | + | tig0019103:2736-2755 | Msa1370210:CDS | 30.0% | |
| TAACATGATATGAATGTCCA+CGG | - | tig0019103:2816-2835 | Msa1370210:intergenic | 30.0% | |
| TTTCAGTTCCTTTCCCTTAA+AGG | - | tig0019103:1795-1814 | Msa1370210:intergenic | 35.0% | |
| GTATTGTTCTACCAGAGATA+TGG | + | tig0019103:1882-1901 | Msa1370210:intron | 35.0% | |
| AATGTCTTGCTTTACACTTC+AGG | + | tig0019103:1925-1944 | Msa1370210:intron | 35.0% | |
| !! | TGCAGTTTTATGCTATGCAA+AGG | - | tig0019103:2059-2078 | Msa1370210:intergenic | 35.0% |
| TGCATAGCATAAAACTGCAT+TGG | + | tig0019103:2060-2079 | Msa1370210:intron | 35.0% | |
| ATAAGCAACAGTCCAAACAT+TGG | - | tig0019103:2130-2149 | Msa1370210:intergenic | 35.0% | |
| TAGAAACCCTCAATTTCGTA+AGG | - | tig0019103:2180-2199 | Msa1370210:intergenic | 35.0% | |
| AATTGAGGGTTTCTAAGTTG+AGG | + | tig0019103:2185-2204 | Msa1370210:intron | 35.0% | |
| ! | ATTGAGGGTTTCTAAGTTGA+GGG | + | tig0019103:2186-2205 | Msa1370210:intron | 35.0% |
| CTGTCATTCAATGGCTAATA+TGG | + | tig0019103:2237-2256 | Msa1370210:intron | 35.0% | |
| TCATTCAATGGCTAATATGG+TGG | + | tig0019103:2240-2259 | Msa1370210:intron | 35.0% | |
| CATTCAATGGCTAATATGGT+GGG | + | tig0019103:2241-2260 | Msa1370210:intron | 35.0% | |
| TTATTGCATATGCGTCTATG+AGG | + | tig0019103:2421-2440 | Msa1370210:intron | 35.0% | |
| TGAACTTACAGGATTGTCTA+CGG | - | tig0019103:2789-2808 | Msa1370210:intergenic | 35.0% | |
| TTTCAGTTCCTTTCCCTTAA+AGG | - | tig0019103:1795-1814 | Msa1370210:intergenic | 35.0% | |
| GTATTGTTCTACCAGAGATA+TGG | + | tig0019103:1882-1901 | Msa1370210:intron | 35.0% | |
| AATGTCTTGCTTTACACTTC+AGG | + | tig0019103:1925-1944 | Msa1370210:intron | 35.0% | |
| !! | TGCAGTTTTATGCTATGCAA+AGG | - | tig0019103:2059-2078 | Msa1370210:intergenic | 35.0% |
| TGCATAGCATAAAACTGCAT+TGG | + | tig0019103:2060-2079 | Msa1370210:intron | 35.0% | |
| ATAAGCAACAGTCCAAACAT+TGG | - | tig0019103:2130-2149 | Msa1370210:intergenic | 35.0% | |
| TAGAAACCCTCAATTTCGTA+AGG | - | tig0019103:2180-2199 | Msa1370210:intergenic | 35.0% | |
| AATTGAGGGTTTCTAAGTTG+AGG | + | tig0019103:2185-2204 | Msa1370210:intron | 35.0% | |
| ! | ATTGAGGGTTTCTAAGTTGA+GGG | + | tig0019103:2186-2205 | Msa1370210:intron | 35.0% |
| CTGTCATTCAATGGCTAATA+TGG | + | tig0019103:2237-2256 | Msa1370210:intron | 35.0% | |
| TCATTCAATGGCTAATATGG+TGG | + | tig0019103:2240-2259 | Msa1370210:intron | 35.0% | |
| CATTCAATGGCTAATATGGT+GGG | + | tig0019103:2241-2260 | Msa1370210:intron | 35.0% | |
| TTATTGCATATGCGTCTATG+AGG | + | tig0019103:2421-2440 | Msa1370210:intron | 35.0% | |
| TGAACTTACAGGATTGTCTA+CGG | - | tig0019103:2789-2808 | Msa1370210:intergenic | 35.0% | |
| ! | GGTTCTCTTTTATCTTGCCA+TGG | + | tig0019103:1568-1587 | Msa1370210:exon | 40.0% |
| TTCTACCAGAGATATGGTCA+TGG | + | tig0019103:1888-1907 | Msa1370210:intron | 40.0% | |
| TATGACCATGACCATATCTC+TGG | - | tig0019103:1896-1915 | Msa1370210:intergenic | 40.0% | |
| ATTGAAGCCATACCAATCAG+CGG | + | tig0019103:1953-1972 | Msa1370210:intron | 40.0% | |
| !! | AGCATAAAACTGCATTGGCT+CGG | + | tig0019103:2065-2084 | Msa1370210:intron | 40.0% |
| ! | CTGTACAAAGTGCCAATGTT+TGG | + | tig0019103:2115-2134 | Msa1370210:intron | 40.0% |
| TCTTCTAGATATGACGAGGT+TGG | + | tig0019103:2560-2579 | Msa1370210:intron | 40.0% | |
| ! | GGTTCTCTTTTATCTTGCCA+TGG | + | tig0019103:1568-1587 | Msa1370210:exon | 40.0% |
| TTCTACCAGAGATATGGTCA+TGG | + | tig0019103:1888-1907 | Msa1370210:intron | 40.0% | |
| TATGACCATGACCATATCTC+TGG | - | tig0019103:1896-1915 | Msa1370210:intergenic | 40.0% | |
| ATTGAAGCCATACCAATCAG+CGG | + | tig0019103:1953-1972 | Msa1370210:intron | 40.0% | |
| !! | AGCATAAAACTGCATTGGCT+CGG | + | tig0019103:2065-2084 | Msa1370210:intron | 40.0% |
| ! | CTGTACAAAGTGCCAATGTT+TGG | + | tig0019103:2115-2134 | Msa1370210:intron | 40.0% |
| TCTTCTAGATATGACGAGGT+TGG | + | tig0019103:2560-2579 | Msa1370210:intron | 40.0% | |
| ! | CTCTTTTATCTTGCCATGGC+CGG | + | tig0019103:1572-1591 | Msa1370210:exon | 45.0% |
| ! | TCTTTTATCTTGCCATGGCC+GGG | + | tig0019103:1573-1592 | Msa1370210:exon | 45.0% |
| GGAGCTGTGACTGTTAATTC+TGG | + | tig0019103:2344-2363 | Msa1370210:intron | 45.0% | |
| CATATGCGTCTATGAGGCAA+TGG | + | tig0019103:2427-2446 | Msa1370210:intron | 45.0% | |
| TCTACGGTGTGTGAACTTAC+AGG | - | tig0019103:2773-2792 | Msa1370210:intergenic | 45.0% | |
| ! | CTCTTTTATCTTGCCATGGC+CGG | + | tig0019103:1572-1591 | Msa1370210:exon | 45.0% |
| ! | TCTTTTATCTTGCCATGGCC+GGG | + | tig0019103:1573-1592 | Msa1370210:exon | 45.0% |
| GGAGCTGTGACTGTTAATTC+TGG | + | tig0019103:2344-2363 | Msa1370210:intron | 45.0% | |
| CATATGCGTCTATGAGGCAA+TGG | + | tig0019103:2427-2446 | Msa1370210:intron | 45.0% | |
| TCTACGGTGTGTGAACTTAC+AGG | - | tig0019103:2773-2792 | Msa1370210:intergenic | 45.0% | |
| ! | CTTTTATCTTGCCATGGCCG+GGG | + | tig0019103:1574-1593 | Msa1370210:exon | 50.0% |
| GAACTGAGCAGTTTCAACCC+CGG | - | tig0019103:1594-1613 | Msa1370210:intergenic | 50.0% | |
| GGGTTGAAACTGCTCAGTTC+AGG | + | tig0019103:1594-1613 | Msa1370210:CDS | 50.0% | |
| ! | TTAGCAGCCGCTGATTGGTA+TGG | - | tig0019103:1963-1982 | Msa1370210:intergenic | 50.0% |
| ATCTGTTAGCAGCCGCTGAT+TGG | - | tig0019103:1968-1987 | Msa1370210:intergenic | 50.0% | |
| TCAGCGGCTGCTAACAGATA+AGG | + | tig0019103:1969-1988 | Msa1370210:intron | 50.0% | |
| CGGCTGCTAACAGATAAGGA+TGG | + | tig0019103:1973-1992 | Msa1370210:intron | 50.0% | |
| CGAGGTTGGCATCAACTAGA+TGG | + | tig0019103:2574-2593 | Msa1370210:intron | 50.0% | |
| TCCTGTAAGTTCACACACCG+TGG | + | tig0019103:2769-2788 | Msa1370210:CDS | 50.0% | |
| TCCACGGTGTGTGAACTTAC+AGG | - | tig0019103:2800-2819 | Msa1370210:intergenic | 50.0% | |
| ! | CTTTTATCTTGCCATGGCCG+GGG | + | tig0019103:1574-1593 | Msa1370210:exon | 50.0% |
| GAACTGAGCAGTTTCAACCC+CGG | - | tig0019103:1594-1613 | Msa1370210:intergenic | 50.0% | |
| GGGTTGAAACTGCTCAGTTC+AGG | + | tig0019103:1594-1613 | Msa1370210:CDS | 50.0% | |
| ! | TTAGCAGCCGCTGATTGGTA+TGG | - | tig0019103:1963-1982 | Msa1370210:intergenic | 50.0% |
| ATCTGTTAGCAGCCGCTGAT+TGG | - | tig0019103:1968-1987 | Msa1370210:intergenic | 50.0% | |
| TCAGCGGCTGCTAACAGATA+AGG | + | tig0019103:1969-1988 | Msa1370210:intron | 50.0% | |
| CGGCTGCTAACAGATAAGGA+TGG | + | tig0019103:1973-1992 | Msa1370210:intron | 50.0% | |
| CGAGGTTGGCATCAACTAGA+TGG | + | tig0019103:2574-2593 | Msa1370210:intron | 50.0% | |
| TCCTGTAAGTTCACACACCG+TGG | + | tig0019103:2769-2788 | Msa1370210:CDS | 50.0% | |
| TCCACGGTGTGTGAACTTAC+AGG | - | tig0019103:2800-2819 | Msa1370210:intergenic | 50.0% | |
| AGCAGTTTCAACCCCGGCCA+TGG | - | tig0019103:1588-1607 | Msa1370210:intergenic | 60.0% | |
| AGCAGTTTCAACCCCGGCCA+TGG | - | tig0019103:1588-1607 | Msa1370210:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019103 | gene | 1490 | 2841 | 1490 | ID=Msa1370210;Name=Msa1370210 |
| tig0019103 | mRNA | 1490 | 2841 | 1490 | ID=Msa1370210-mRNA-1;Parent=Msa1370210;Name=Msa1370210-mRNA-1;_AED=0.55;_eAED=0.55;_QI=97|0|0.5|0.5|1|1|2|0|46 |
| tig0019103 | exon | 1490 | 1615 | 1490 | ID=Msa1370210-mRNA-1:exon:1585;Parent=Msa1370210-mRNA-1 |
| tig0019103 | exon | 2730 | 2841 | 2730 | ID=Msa1370210-mRNA-1:exon:1586;Parent=Msa1370210-mRNA-1 |
| tig0019103 | five_prime_UTR | 1490 | 1586 | 1490 | ID=Msa1370210-mRNA-1:five_prime_utr;Parent=Msa1370210-mRNA-1 |
| tig0019103 | CDS | 1587 | 1615 | 1587 | ID=Msa1370210-mRNA-1:cds;Parent=Msa1370210-mRNA-1 |
| tig0019103 | CDS | 2730 | 2841 | 2730 | ID=Msa1370210-mRNA-1:cds;Parent=Msa1370210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
