Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270270 | sp|Q84M43|CESA2_ORYSJ | 68.493 | 73 | 23 | 0 | 5 | 77 | 674 | 746 | 2.60e-27 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270270 | A0A072TNJ7 | 87.838 | 74 | 9 | 0 | 4 | 77 | 678 | 751 | 1.82e-35 | 140 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa1270270 | 0.806338 | 8.634386e-50 | -8.615850e-47 |
| Msa0015750 | Msa1270270 | 0.874251 | 7.815426e-68 | -8.615850e-47 |
| Msa0016570 | Msa1270270 | 0.852532 | 4.340957e-61 | -8.615850e-47 |
| Msa0016580 | Msa1270270 | 0.834357 | 3.141319e-56 | -8.615850e-47 |
| Msa0092630 | Msa1270270 | 0.813767 | 2.166066e-51 | -8.615850e-47 |
| Msa0102070 | Msa1270270 | 0.879596 | 1.094806e-69 | -8.615850e-47 |
| Msa0110270 | Msa1270270 | 0.818561 | 1.837987e-52 | -8.615850e-47 |
| Msa0111510 | Msa1270270 | 0.824579 | 7.477067e-54 | -8.615850e-47 |
| Msa0118050 | Msa1270270 | 0.871998 | 4.457220e-67 | -8.615850e-47 |
| Msa0118060 | Msa1270270 | 0.841650 | 4.178883e-58 | -8.615850e-47 |
| Msa0604350 | Msa1270270 | 0.845558 | 3.767927e-59 | -8.615850e-47 |
| Msa0627410 | Msa1270270 | 0.806777 | 6.975360e-50 | -8.615850e-47 |
| Msa0636170 | Msa1270270 | 0.869187 | 3.735545e-66 | -8.615850e-47 |
| Msa0639610 | Msa1270270 | 0.833090 | 6.511056e-56 | -8.615850e-47 |
| Msa0675830 | Msa1270270 | 0.816595 | 5.099818e-52 | -8.615850e-47 |
| Msa0678930 | Msa1270270 | 0.839633 | 1.410379e-57 | -8.615850e-47 |
| Msa0694370 | Msa1270270 | 0.826618 | 2.457731e-54 | -8.615850e-47 |
| Msa0718780 | Msa1270270 | 0.812315 | 4.509484e-51 | -8.615850e-47 |
| Msa0722510 | Msa1270270 | 0.808425 | 3.116890e-50 | -8.615850e-47 |
| Msa0725850 | Msa1270270 | 0.828427 | 9.045677e-55 | -8.615850e-47 |
| Msa0726140 | Msa1270270 | 0.895469 | 9.303775e-76 | -8.615850e-47 |
| Msa0729800 | Msa1270270 | 0.881335 | 2.614184e-70 | -8.615850e-47 |
| Msa0732310 | Msa1270270 | 0.804236 | 2.380264e-49 | -8.615850e-47 |
| Msa0732710 | Msa1270270 | 0.850301 | 1.854840e-60 | -8.615850e-47 |
| Msa0733290 | Msa1270270 | 0.879868 | 8.769573e-70 | -8.615850e-47 |
| Msa0735080 | Msa1270270 | 0.820728 | 5.882636e-53 | -8.615850e-47 |
| Msa0741990 | Msa1270270 | 0.825164 | 5.442486e-54 | -8.615850e-47 |
| Msa0743810 | Msa1270270 | 0.912934 | 1.101638e-83 | -8.615850e-47 |
| Msa0745060 | Msa1270270 | 0.925330 | 2.124777e-90 | -8.615850e-47 |
| Msa0763260 | Msa1270270 | 0.805654 | 1.202709e-49 | -8.615850e-47 |
| Msa0767720 | Msa1270270 | 0.841797 | 3.820958e-58 | -8.615850e-47 |
| Msa0775300 | Msa1270270 | 0.810027 | 1.413293e-50 | -8.615850e-47 |
| Msa0777870 | Msa1270270 | 0.868034 | 8.808864e-66 | -8.615850e-47 |
| Msa0783160 | Msa1270270 | 0.883218 | 5.405676e-71 | -8.615850e-47 |
| Msa0784290 | Msa1270270 | 0.812374 | 4.378331e-51 | -8.615850e-47 |
| Msa0784300 | Msa1270270 | 0.802672 | 5.019891e-49 | -8.615850e-47 |
| Msa0787600 | Msa1270270 | 0.864641 | 1.050265e-64 | -8.615850e-47 |
| Msa0804210 | Msa1270270 | 0.815509 | 8.913701e-52 | -8.615850e-47 |
| Msa0808010 | Msa1270270 | 0.870771 | 1.134643e-66 | -8.615850e-47 |
| Msa0808020 | Msa1270270 | 0.865559 | 5.407700e-65 | -8.615850e-47 |
| Msa0811080 | Msa1270270 | 0.822438 | 2.369339e-53 | -8.615850e-47 |
| Msa0811270 | Msa1270270 | 0.829939 | 3.886777e-55 | -8.615850e-47 |
| Msa0824600 | Msa1270270 | 0.804846 | 1.775808e-49 | -8.615850e-47 |
| Msa0825860 | Msa1270270 | 0.930576 | 1.339480e-93 | -8.615850e-47 |
| Msa0833290 | Msa1270270 | 0.826917 | 2.084408e-54 | -8.615850e-47 |
| Msa0833300 | Msa1270270 | 0.816184 | 6.301578e-52 | -8.615850e-47 |
| Msa0123810 | Msa1270270 | 0.829456 | 5.094981e-55 | -8.615850e-47 |
| Msa0124100 | Msa1270270 | 0.827119 | 1.865652e-54 | -8.615850e-47 |
| Msa0124150 | Msa1270270 | 0.813636 | 2.315188e-51 | -8.615850e-47 |
| Msa0142220 | Msa1270270 | 0.831445 | 1.662595e-55 | -8.615850e-47 |
| Msa0145750 | Msa1270270 | 0.895908 | 6.128022e-76 | -8.615850e-47 |
| Msa0153910 | Msa1270270 | 0.832835 | 7.534530e-56 | -8.615850e-47 |
| Msa0200000 | Msa1270270 | 0.877272 | 7.179727e-69 | -8.615850e-47 |
| Msa0200940 | Msa1270270 | 0.815674 | 8.189727e-52 | -8.615850e-47 |
| Msa0227480 | Msa1270270 | 0.866881 | 2.061856e-65 | -8.615850e-47 |
| Msa0232850 | Msa1270270 | 0.881323 | 2.640841e-70 | -8.615850e-47 |
| Msa1230430 | Msa1270270 | 0.833422 | 5.381272e-56 | -8.615850e-47 |
| Msa1246880 | Msa1270270 | 0.867836 | 1.020222e-65 | -8.615850e-47 |
| Msa1260100 | Msa1270270 | 0.835793 | 1.364421e-56 | -8.615850e-47 |
| Msa1269670 | Msa1270270 | 0.919310 | 5.280600e-87 | -8.615850e-47 |
| Msa1270230 | Msa1270270 | 0.916645 | 1.387528e-85 | -8.615850e-47 |
| Msa1270240 | Msa1270270 | 0.891555 | 3.568431e-74 | -8.615850e-47 |
| Msa1270270 | Msa1273230 | 0.849337 | 3.450503e-60 | -8.615850e-47 |
| Msa1270270 | Msa1283330 | 0.925070 | 3.015538e-90 | -8.615850e-47 |
| Msa1270270 | Msa1285930 | 0.912918 | 1.121761e-83 | -8.615850e-47 |
| Msa1270270 | Msa1287800 | 0.910083 | 2.783082e-82 | -8.615850e-47 |
| Msa1270270 | Msa1287810 | 0.921066 | 5.758549e-88 | -8.615850e-47 |
| Msa1270270 | Msa1287820 | 0.827234 | 1.750949e-54 | -8.615850e-47 |
| Msa1270270 | Msa1287830 | 0.868451 | 6.466721e-66 | -8.615850e-47 |
| Msa1270270 | Msa1289420 | 0.818344 | 2.058159e-52 | -8.615850e-47 |
| Msa1270270 | Msa1289430 | 0.850236 | 1.934694e-60 | -8.615850e-47 |
| Msa1270270 | Msa1297210 | 0.857838 | 1.242677e-62 | -8.615850e-47 |
| Msa1270270 | Msa1305480 | 0.852746 | 3.770049e-61 | -8.615850e-47 |
| Msa1270270 | Msa1307890 | 0.852370 | 4.827995e-61 | -8.615850e-47 |
| Msa1270270 | Msa1310120 | 0.827466 | 1.540773e-54 | -8.615850e-47 |
| Msa1270270 | Msa1314280 | 0.813097 | 3.041548e-51 | -8.615850e-47 |
| Msa1270270 | Msa1320300 | 0.858113 | 1.029704e-62 | -8.615850e-47 |
| Msa1270270 | Msa1321560 | 0.832585 | 8.694525e-56 | -8.615850e-47 |
| Msa1270270 | Msa1340590 | 0.892119 | 2.129657e-74 | -8.615850e-47 |
| Msa1270270 | Msa1342200 | 0.868906 | 4.608727e-66 | -8.615850e-47 |
| Msa1270270 | Msa1369430 | 0.835251 | 1.871118e-56 | -8.615850e-47 |
| Msa1270270 | Msa1370210 | 0.815585 | 8.574359e-52 | -8.615850e-47 |
| Msa1270270 | Msa1382690 | 0.818840 | 1.588600e-52 | -8.615850e-47 |
| Msa1270270 | Msa1382700 | 0.817310 | 3.523401e-52 | -8.615850e-47 |
| Msa1270270 | Msa1386330 | 0.839049 | 1.999077e-57 | -8.615850e-47 |
| Msa1270270 | Msa1397150 | 0.813316 | 2.723165e-51 | -8.615850e-47 |
| Msa1270270 | Msa1397580 | 0.882084 | 1.401028e-70 | -8.615850e-47 |
| Msa1270270 | Msa1402790 | 0.826877 | 2.131116e-54 | -8.615850e-47 |
| Msa1270270 | Msa1404000 | 0.896120 | 5.003994e-76 | -8.615850e-47 |
| Msa1270270 | Msa1408780 | 0.854385 | 1.275378e-61 | -8.615850e-47 |
| Msa1270270 | Msa1415310 | 0.917411 | 5.487769e-86 | -8.615850e-47 |
| Msa1270270 | Msa1422180 | 0.874823 | 4.997433e-68 | -8.615850e-47 |
| Msa1270270 | Msa1433120 | 0.876945 | 9.321028e-69 | -8.615850e-47 |
| Msa1270270 | Msa1451190 | 0.805143 | 1.538768e-49 | -8.615850e-47 |
| Msa1270270 | Msa1451570 | 0.816700 | 4.831784e-52 | -8.615850e-47 |
| Msa0365500 | Msa1270270 | 0.870912 | 1.019207e-66 | -8.615850e-47 |
| Msa0366580 | Msa1270270 | 0.853282 | 2.648627e-61 | -8.615850e-47 |
| Msa0369730 | Msa1270270 | 0.803540 | 3.320264e-49 | -8.615850e-47 |
| Msa0384800 | Msa1270270 | 0.864504 | 1.159630e-64 | -8.615850e-47 |
| Msa0384890 | Msa1270270 | 0.808737 | 2.674101e-50 | -8.615850e-47 |
| Msa0394970 | Msa1270270 | 0.807599 | 4.672357e-50 | -8.615850e-47 |
| Msa0396600 | Msa1270270 | 0.831713 | 1.428473e-55 | -8.615850e-47 |
| Msa0406120 | Msa1270270 | 0.862705 | 4.192870e-64 | -8.615850e-47 |
| Msa0406280 | Msa1270270 | 0.818290 | 2.117950e-52 | -8.615850e-47 |
| Msa0414410 | Msa1270270 | 0.874093 | 8.838890e-68 | -8.615850e-47 |
| Msa0414420 | Msa1270270 | 0.908806 | 1.142370e-81 | -8.615850e-47 |
| Msa0423020 | Msa1270270 | 0.809555 | 1.785440e-50 | -8.615850e-47 |
| Msa0435230 | Msa1270270 | 0.808477 | 3.038009e-50 | -8.615850e-47 |
| Msa0436780 | Msa1270270 | 0.833138 | 6.334331e-56 | -8.615850e-47 |
| Msa0436800 | Msa1270270 | 0.801435 | 9.016217e-49 | -8.615850e-47 |
| Msa0438620 | Msa1270270 | 0.870424 | 1.475160e-66 | -8.615850e-47 |
| Msa0450000 | Msa1270270 | 0.854844 | 9.389409e-62 | -8.615850e-47 |
| Msa0450570 | Msa1270270 | 0.834326 | 3.197248e-56 | -8.615850e-47 |
| Msa0451730 | Msa1270270 | 0.848158 | 7.325042e-60 | -8.615850e-47 |
| Msa0452900 | Msa1270270 | 0.932843 | 4.627463e-95 | -8.615850e-47 |
| Msa0452910 | Msa1270270 | 0.832666 | 8.298411e-56 | -8.615850e-47 |
| Msa0453120 | Msa1270270 | 0.854053 | 1.589649e-61 | -8.615850e-47 |
| Msa0454370 | Msa1270270 | 0.836246 | 1.047207e-56 | -8.615850e-47 |
| Msa0454910 | Msa1270270 | 0.870707 | 1.190704e-66 | -8.615850e-47 |
| Msa0456200 | Msa1270270 | 0.800297 | 1.539655e-48 | -8.615850e-47 |
| Msa0458420 | Msa1270270 | 0.820185 | 7.839374e-53 | -8.615850e-47 |
| Msa0459160 | Msa1270270 | 0.833926 | 4.027042e-56 | -8.615850e-47 |
| Msa0459170 | Msa1270270 | 0.819529 | 1.107442e-52 | -8.615850e-47 |
| Msa0482620 | Msa1270270 | 0.820184 | 7.841483e-53 | -8.615850e-47 |
| Msa0979850 | Msa1270270 | 0.803589 | 3.243080e-49 | -8.615850e-47 |
| Msa0981270 | Msa1270270 | 0.815802 | 7.671174e-52 | -8.615850e-47 |
| Msa0981370 | Msa1270270 | 0.854665 | 1.058365e-61 | -8.615850e-47 |
| Msa0986360 | Msa1270270 | 0.801958 | 7.044285e-49 | -8.615850e-47 |
| Msa0986400 | Msa1270270 | 0.815971 | 7.031442e-52 | -8.615850e-47 |
| Msa0989060 | Msa1270270 | 0.885988 | 5.053645e-72 | -8.615850e-47 |
| Msa1016280 | Msa1270270 | 0.907550 | 4.488998e-81 | -8.615850e-47 |
| Msa1024240 | Msa1270270 | 0.876810 | 1.038742e-68 | -8.615850e-47 |
| Msa1024370 | Msa1270270 | 0.817140 | 3.847221e-52 | -8.615850e-47 |
| Msa1025360 | Msa1270270 | 0.916709 | 1.285441e-85 | -8.615850e-47 |
| Msa1025370 | Msa1270270 | 0.928211 | 3.978975e-92 | -8.615850e-47 |
| Msa1030060 | Msa1270270 | 0.860186 | 2.462323e-63 | -8.615850e-47 |
| Msa1044830 | Msa1270270 | 0.925272 | 2.297110e-90 | -8.615850e-47 |
| Msa1044840 | Msa1270270 | 0.921969 | 1.805241e-88 | -8.615850e-47 |
| Msa1060840 | Msa1270270 | 0.840186 | 1.011933e-57 | -8.615850e-47 |
| Msa1077460 | Msa1270270 | 0.817352 | 3.447248e-52 | -8.615850e-47 |
| Msa1092990 | Msa1270270 | 0.910491 | 1.764994e-82 | -8.615850e-47 |
| Msa1096580 | Msa1270270 | 0.820949 | 5.235079e-53 | -8.615850e-47 |
| Msa1100980 | Msa1270270 | 0.925767 | 1.173714e-90 | -8.615850e-47 |
| Msa0267000 | Msa1270270 | 0.918662 | 1.181015e-86 | -8.615850e-47 |
| Msa0267010 | Msa1270270 | 0.915490 | 5.533749e-85 | -8.615850e-47 |
| Msa0270520 | Msa1270270 | 0.829142 | 6.073252e-55 | -8.615850e-47 |
| Msa0282310 | Msa1270270 | 0.813470 | 2.518905e-51 | -8.615850e-47 |
| Msa0285810 | Msa1270270 | 0.802202 | 6.275102e-49 | -8.615850e-47 |
| Msa0304170 | Msa1270270 | 0.862283 | 5.657126e-64 | -8.615850e-47 |
| Msa0306460 | Msa1270270 | 0.846489 | 2.103938e-59 | -8.615850e-47 |
| Msa0313760 | Msa1270270 | 0.803242 | 3.828173e-49 | -8.615850e-47 |
| Msa0342240 | Msa1270270 | 0.913748 | 4.295224e-84 | -8.615850e-47 |
| Msa0353190 | Msa1270270 | 0.812581 | 3.944113e-51 | -8.615850e-47 |
| Msa0360510 | Msa1270270 | 0.865198 | 7.026623e-65 | -8.615850e-47 |
| Msa0362420 | Msa1270270 | 0.818025 | 2.430722e-52 | -8.615850e-47 |
| Msa0363300 | Msa1270270 | 0.826099 | 3.267460e-54 | -8.615850e-47 |
| Msa1109440 | Msa1270270 | 0.880377 | 5.772826e-70 | -8.615850e-47 |
| Msa1112300 | Msa1270270 | 0.835440 | 1.676418e-56 | -8.615850e-47 |
| Msa1121200 | Msa1270270 | 0.874802 | 5.078066e-68 | -8.615850e-47 |
| Msa1123420 | Msa1270270 | 0.822200 | 2.690507e-53 | -8.615850e-47 |
| Msa1135740 | Msa1270270 | 0.903859 | 2.241760e-79 | -8.615850e-47 |
| Msa1136090 | Msa1270270 | 0.844960 | 5.468253e-59 | -8.615850e-47 |
| Msa1146110 | Msa1270270 | 0.914426 | 1.943351e-84 | -8.615850e-47 |
| Msa1148020 | Msa1270270 | 0.803826 | 2.896536e-49 | -8.615850e-47 |
| Msa1149360 | Msa1270270 | 0.834310 | 3.227951e-56 | -8.615850e-47 |
| Msa1150370 | Msa1270270 | 0.865298 | 6.536910e-65 | -8.615850e-47 |
| Msa1164120 | Msa1270270 | 0.823398 | 1.414948e-53 | -8.615850e-47 |
| Msa1173920 | Msa1270270 | 0.889246 | 2.876419e-73 | -8.615850e-47 |
| Msa1178340 | Msa1270270 | 0.861837 | 7.748006e-64 | -8.615850e-47 |
| Msa1178720 | Msa1270270 | 0.809229 | 2.097909e-50 | -8.615850e-47 |
| Msa1182090 | Msa1270270 | 0.829020 | 6.502237e-55 | -8.615850e-47 |
| Msa1184420 | Msa1270270 | 0.801992 | 6.930625e-49 | -8.615850e-47 |
| Msa1187940 | Msa1270270 | 0.932173 | 1.267142e-94 | -8.615850e-47 |
| Msa1187950 | Msa1270270 | 0.887839 | 1.002875e-72 | -8.615850e-47 |
| Msa1192640 | Msa1270270 | 0.896932 | 2.292509e-76 | -8.615850e-47 |
| Msa1193730 | Msa1270270 | 0.822502 | 2.288494e-53 | -8.615850e-47 |
| Msa0485030 | Msa1270270 | 0.818007 | 2.453977e-52 | -8.615850e-47 |
| Msa0491590 | Msa1270270 | 0.870831 | 1.083844e-66 | -8.615850e-47 |
| Msa0502760 | Msa1270270 | 0.854575 | 1.123147e-61 | -8.615850e-47 |
| Msa0506270 | Msa1270270 | 0.845828 | 3.183715e-59 | -8.615850e-47 |
| Msa0534540 | Msa1270270 | 0.824126 | 9.558758e-54 | -8.615850e-47 |
| Msa0548060 | Msa1270270 | 0.862283 | 5.656683e-64 | -8.615850e-47 |
| Msa0564890 | Msa1270270 | 0.875145 | 3.879940e-68 | -8.615850e-47 |
| Msa0596150 | Msa1270270 | 0.832057 | 1.174412e-55 | -8.615850e-47 |
| Msa0845930 | Msa1270270 | 0.818800 | 1.622302e-52 | -8.615850e-47 |
| Msa0846210 | Msa1270270 | 0.826209 | 3.075184e-54 | -8.615850e-47 |
| Msa0846330 | Msa1270270 | 0.895268 | 1.126179e-75 | -8.615850e-47 |
| Msa0846350 | Msa1270270 | 0.891258 | 4.682573e-74 | -8.615850e-47 |
| Msa0848960 | Msa1270270 | 0.827833 | 1.257379e-54 | -8.615850e-47 |
| Msa0851390 | Msa1270270 | 0.810184 | 1.307610e-50 | -8.615850e-47 |
| Msa0854980 | Msa1270270 | 0.833282 | 5.833631e-56 | -8.615850e-47 |
| Msa0858980 | Msa1270270 | 0.826609 | 2.469433e-54 | -8.615850e-47 |
| Msa0865320 | Msa1270270 | 0.915869 | 3.521770e-85 | -8.615850e-47 |
| Msa0872230 | Msa1270270 | 0.832260 | 1.046023e-55 | -8.615850e-47 |
| Msa0873460 | Msa1270270 | 0.817985 | 2.482179e-52 | -8.615850e-47 |
| Msa0885280 | Msa1270270 | 0.811802 | 5.834901e-51 | -8.615850e-47 |
| Msa0885290 | Msa1270270 | 0.855178 | 7.511718e-62 | -8.615850e-47 |
| Msa0887920 | Msa1270270 | 0.825461 | 4.628509e-54 | -8.615850e-47 |
| Msa0888370 | Msa1270270 | 0.883464 | 4.390483e-71 | -8.615850e-47 |
| Msa0888420 | Msa1270270 | 0.851272 | 9.889415e-61 | -8.615850e-47 |
| Msa0889850 | Msa1270270 | 0.803541 | 3.318444e-49 | -8.615850e-47 |
| Msa0895270 | Msa1270270 | 0.818153 | 2.273763e-52 | -8.615850e-47 |
| Msa0896080 | Msa1270270 | 0.827019 | 1.970797e-54 | -8.615850e-47 |
| Msa0898080 | Msa1270270 | 0.844983 | 5.391832e-59 | -8.615850e-47 |
| Msa0899450 | Msa1270270 | 0.801644 | 8.171499e-49 | -8.615850e-47 |
| Msa0907260 | Msa1270270 | 0.804465 | 2.132422e-49 | -8.615850e-47 |
| Msa0914760 | Msa1270270 | 0.806027 | 1.003813e-49 | -8.615850e-47 |
| Msa0952350 | Msa1270270 | 0.823042 | 1.713421e-53 | -8.615850e-47 |
| Msa0952720 | Msa1270270 | 0.815674 | 8.190807e-52 | -8.615850e-47 |
| Msa0954910 | Msa1270270 | 0.812290 | 4.567195e-51 | -8.615850e-47 |
| Msa0956270 | Msa1270270 | 0.807845 | 4.142759e-50 | -8.615850e-47 |
| Msa0957680 | Msa1270270 | 0.808346 | 3.239818e-50 | -8.615850e-47 |
| Msa0957860 | Msa1270270 | 0.834269 | 3.305477e-56 | -8.615850e-47 |
| Msa0957960 | Msa1270270 | 0.834838 | 2.378034e-56 | -8.615850e-47 |
| Msa0974870 | Msa1270270 | 0.801843 | 7.437470e-49 | -8.615850e-47 |
| Msa0979410 | Msa1270270 | 0.808882 | 2.489862e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270270 | MtrunA17_Chr8g0352231 | 87.838 | 74 | 9 | 0 | 4 | 77 | 678 | 751 | 3.50e-39 | 140 |
| Msa1270270 | MtrunA17_Chr3g0088821 | 76.056 | 71 | 17 | 0 | 7 | 77 | 681 | 751 | 2.76e-31 | 117 |
| Msa1270270 | MtrunA17_Chr7g0267731 | 58.974 | 78 | 28 | 1 | 2 | 79 | 588 | 661 | 2.22e-21 | 89.4 |
| Msa1270270 | MtrunA17_Chr3g0137951 | 56.944 | 72 | 29 | 1 | 6 | 77 | 690 | 759 | 2.34e-19 | 83.6 |
| Msa1270270 | MtrunA17_Chr8g0356101 | 79.487 | 39 | 8 | 0 | 93 | 131 | 35 | 73 | 7.31e-16 | 68.9 |
| Msa1270270 | MtrunA17_Chr8g0383701 | 42.466 | 73 | 40 | 1 | 7 | 79 | 702 | 772 | 3.15e-13 | 66.2 |
| Msa1270270 | MtrunA17_Chr1g0201731 | 51.562 | 64 | 29 | 1 | 14 | 77 | 710 | 771 | 7.14e-13 | 65.1 |
| Msa1270270 | MtrunA17_Chr2g0284211 | 50.769 | 65 | 27 | 1 | 13 | 77 | 591 | 650 | 3.93e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270270 | AT5G05170.1 | 69.444 | 72 | 22 | 0 | 6 | 77 | 667 | 738 | 7.80e-28 | 108 |
| Msa1270270 | AT5G44030.3 | 49.351 | 77 | 38 | 1 | 1 | 77 | 367 | 442 | 8.37e-18 | 79.7 |
| Msa1270270 | AT5G44030.1 | 49.351 | 77 | 38 | 1 | 1 | 77 | 646 | 721 | 8.68e-18 | 79.7 |
| Msa1270270 | AT5G44030.2 | 49.351 | 77 | 38 | 1 | 1 | 77 | 675 | 750 | 8.70e-18 | 79.7 |
| Msa1270270 | AT4G32410.1 | 54.688 | 64 | 27 | 1 | 14 | 77 | 692 | 753 | 5.50e-17 | 77.4 |
| Msa1270270 | AT2G25540.1 | 48.611 | 72 | 35 | 1 | 6 | 77 | 664 | 733 | 6.08e-15 | 71.6 |
| Msa1270270 | AT5G17420.1 | 51.562 | 64 | 30 | 1 | 15 | 77 | 636 | 699 | 7.93e-13 | 65.5 |
| Msa1270270 | AT4G18780.1 | 52.308 | 65 | 26 | 1 | 13 | 77 | 597 | 656 | 1.49e-12 | 64.7 |
| Msa1270270 | AT5G09870.1 | 45.455 | 66 | 35 | 1 | 14 | 79 | 681 | 745 | 2.68e-12 | 63.9 |
| Msa1270270 | AT5G64740.1 | 42.308 | 78 | 43 | 1 | 2 | 79 | 685 | 760 | 8.50e-12 | 62.4 |
| Msa1270270 | AT4G39350.1 | 40.909 | 66 | 39 | 0 | 14 | 79 | 694 | 759 | 4.98e-11 | 60.1 |
Find 37 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTCCTTCAAAAGAGTTTC+TGG | 0.134508 | 8_3:+3700824 | None:intergenic |
| GAGAACCAATTCCGGTTATT+AGG | 0.172098 | 8_3:-3699849 | None:intergenic |
| GATATTGAAGAAGGAGTAGA+AGG | 0.310085 | 8_3:-3701195 | Msa1270270:intron |
| TATGGCAGCGTGGACAATTA+AGG | 0.350738 | 8_3:-3699930 | Msa1270270:CDS |
| AGAACCAATTCCGGTTATTA+GGG | 0.369041 | 8_3:-3699848 | None:intergenic |
| TCTGTCGTTGTTGTTGTTGT+TGG | 0.378622 | 8_3:+3699892 | None:intergenic |
| TGAACCCTAATAACCGGAAT+TGG | 0.412729 | 8_3:+3699844 | None:intergenic |
| ATGACGAGGGCAGAGTTTGC+CGG | 0.418793 | 8_3:-3699997 | Msa1270270:CDS |
| TAAAGCGCTGTCAGATCATA+TGG | 0.430584 | 8_3:-3699948 | Msa1270270:CDS |
| ATTATATGAACCCTAATAAC+CGG | 0.440368 | 8_3:+3699838 | None:intergenic |
| ACAGAAACAATCTGAACAAA+AGG | 0.453100 | 8_3:-3699874 | Msa1270270:CDS |
| AACTGTGTCGATCTTCAGTC+TGG | 0.456542 | 8_3:-3701220 | Msa1270270:CDS |
| TGTTATCAGCGGTGGTTATG+AGG | 0.468040 | 8_3:-3700796 | Msa1270270:CDS |
| GTTATGAGGATAAATCAGAA+TGG | 0.482863 | 8_3:-3700782 | Msa1270270:CDS |
| ATTCAATAAAAGCAGCTGAT+TGG | 0.485805 | 8_3:+3700888 | None:intergenic |
| TTATGAGGATAAATCAGAAT+GGG | 0.486219 | 8_3:-3700781 | Msa1270270:CDS |
| GAGGACCTTGAGAAAAGATT+CGG | 0.496429 | 8_3:-3700911 | Msa1270270:CDS |
| GGTAAGAGTCGCGGTTATGC+CGG | 0.506860 | 8_3:+3699978 | None:intergenic |
| GGCTATTATGTTATCAGCGG+TGG | 0.529818 | 8_3:-3700804 | Msa1270270:CDS |
| AAAAGGAGGAGAACCAATTC+CGG | 0.540362 | 8_3:-3699857 | Msa1270270:CDS |
| CGTCATAAGTTGATCTCCCA+TGG | 0.549454 | 8_3:+3700014 | None:intergenic |
| AGTCTGGAGGATATTGAAGA+AGG | 0.572692 | 8_3:-3701204 | Msa1270270:CDS |
| GAATCTACGCTGATGGAGAA+TGG | 0.583472 | 8_3:-3700869 | Msa1270270:CDS |
| GAAACAATCTGAACAAAAGG+AGG | 0.613600 | 8_3:-3699871 | Msa1270270:CDS |
| AGACTGAAGATCGACACAGT+TGG | 0.615352 | 8_3:+3701222 | None:intergenic |
| CTGACAGCGCTTTAATGTCG+TGG | 0.620345 | 8_3:+3699957 | None:intergenic |
| TAATGTCGTGGTAAGAGTCG+CGG | 0.643209 | 8_3:+3699969 | None:intergenic |
| TGTGTCGATCTTCAGTCTGG+AGG | 0.650998 | 8_3:-3701217 | Msa1270270:CDS |
| TAAATCAGAATGGGGAACAG+AGG | 0.664013 | 8_3:-3700772 | Msa1270270:intron |
| TATGAGGATAAATCAGAATG+GGG | 0.668700 | 8_3:-3700780 | Msa1270270:CDS |
| GGGAGATCAACTTATGACGA+GGG | 0.669550 | 8_3:-3700010 | Msa1270270:CDS |
| TGGGAGATCAACTTATGACG+AGG | 0.671953 | 8_3:-3700011 | Msa1270270:CDS |
| AGCACAACGTATGTCACGAG+AGG | 0.678396 | 8_3:-3700930 | Msa1270270:CDS |
| GTTTCTGGAGTAGCACTCTG+AGG | 0.680321 | 8_3:+3700839 | None:intergenic |
| GGAGGCTATTATGTTATCAG+CGG | 0.687680 | 8_3:-3700807 | Msa1270270:CDS |
| TCTACGCTGATGGAGAATGG+TGG | 0.763159 | 8_3:-3700866 | Msa1270270:CDS |
| TGTCAGATCATATGGCAGCG+TGG | 0.780797 | 8_3:-3699940 | Msa1270270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTCTTAAATTATTAT+TGG | - | chr8_3:3700448-3700467 | Msa1270270:intron | 10.0% |
| !!! | TCATTTTCTTAAATTATTAT+TGG | - | chr8_3:3700448-3700467 | Msa1270270:intron | 10.0% |
| !! | AAAAAAAATAGTTTGAACTA+TGG | + | chr8_3:3699957-3699976 | None:intergenic | 15.0% |
| !!! | TTTAATTTTAGCAATTGTTA+TGG | - | chr8_3:3700112-3700131 | Msa1270270:intron | 15.0% |
| !!! | CATTAGTTTTTTTTTTTGAA+AGG | + | chr8_3:3700499-3700518 | None:intergenic | 15.0% |
| !! | TGAATAAAATAAAAAACCAA+AGG | - | chr8_3:3700517-3700536 | Msa1270270:intron | 15.0% |
| !!! | TATAGTTTTATTTATTGGAT+CGG | + | chr8_3:3700667-3700686 | None:intergenic | 15.0% |
| !!! | GTTTGTATAGTTTTATTTAT+TGG | + | chr8_3:3700672-3700691 | None:intergenic | 15.0% |
| !!! | ATAGAAAATTCTAGAAAATT+AGG | + | chr8_3:3700783-3700802 | None:intergenic | 15.0% |
| !! | AAAAAAAATAGTTTGAACTA+TGG | + | chr8_3:3699957-3699976 | None:intergenic | 15.0% |
| !!! | TTTAATTTTAGCAATTGTTA+TGG | - | chr8_3:3700112-3700131 | Msa1270270:intron | 15.0% |
| !!! | CATTAGTTTTTTTTTTTGAA+AGG | + | chr8_3:3700499-3700518 | None:intergenic | 15.0% |
| !! | TGAATAAAATAAAAAACCAA+AGG | - | chr8_3:3700517-3700536 | Msa1270270:intron | 15.0% |
| !!! | TATAGTTTTATTTATTGGAT+CGG | + | chr8_3:3700667-3700686 | None:intergenic | 15.0% |
| !!! | GTTTGTATAGTTTTATTTAT+TGG | + | chr8_3:3700672-3700691 | None:intergenic | 15.0% |
| !!! | ATAGAAAATTCTAGAAAATT+AGG | + | chr8_3:3700783-3700802 | None:intergenic | 15.0% |
| !! | AAATACCTAAATCATACTTT+AGG | + | chr8_3:3700095-3700114 | None:intergenic | 20.0% |
| !!! | ATTGTTATGGATATTTTTTC+AGG | - | chr8_3:3700125-3700144 | Msa1270270:intron | 20.0% |
| !!! | TGTTTTCAGTTTGTTATTTT+AGG | - | chr8_3:3700805-3700824 | Msa1270270:CDS | 20.0% |
| !! | AAATACCTAAATCATACTTT+AGG | + | chr8_3:3700095-3700114 | None:intergenic | 20.0% |
| !!! | ATTGTTATGGATATTTTTTC+AGG | - | chr8_3:3700125-3700144 | Msa1270270:intron | 20.0% |
| !!! | TGTTTTCAGTTTGTTATTTT+AGG | - | chr8_3:3700805-3700824 | Msa1270270:CDS | 20.0% |
| ! | GAAAATGACAACGTTAAATA+TGG | + | chr8_3:3699994-3700013 | None:intergenic | 25.0% |
| ! | GTTAACCTAAAGTATGATTT+AGG | - | chr8_3:3700087-3700106 | Msa1270270:intron | 25.0% |
| ! | TTATGAGGATAAATCAGAAT+GGG | - | chr8_3:3700318-3700337 | Msa1270270:intron | 25.0% |
| ! | AAATTACTAATAAAACCCTC+AGG | + | chr8_3:3700740-3700759 | None:intergenic | 25.0% |
| !!! | TGAGGGTTTTATTAGTAATT+TGG | - | chr8_3:3700739-3700758 | Msa1270270:intron | 25.0% |
| ! | ATCATGTTAGAAAAAAGAAC+AGG | + | chr8_3:3701062-3701081 | None:intergenic | 25.0% |
| ! | GAAAATGACAACGTTAAATA+TGG | + | chr8_3:3699994-3700013 | None:intergenic | 25.0% |
| ! | GTTAACCTAAAGTATGATTT+AGG | - | chr8_3:3700087-3700106 | Msa1270270:intron | 25.0% |
| ! | TTATGAGGATAAATCAGAAT+GGG | - | chr8_3:3700318-3700337 | Msa1270270:intron | 25.0% |
| ! | AAATTACTAATAAAACCCTC+AGG | + | chr8_3:3700740-3700759 | None:intergenic | 25.0% |
| !!! | TGAGGGTTTTATTAGTAATT+TGG | - | chr8_3:3700739-3700758 | Msa1270270:intron | 25.0% |
| ! | ATCATGTTAGAAAAAAGAAC+AGG | + | chr8_3:3701062-3701081 | None:intergenic | 25.0% |
| ! | AAAAAGTATAACAAGCACGT+CGG | - | chr8_3:3699853-3699872 | Msa1270270:CDS | 30.0% |
| !!! | ATGGATATTTTTTCAGGTTC+TGG | - | chr8_3:3700131-3700150 | Msa1270270:intron | 30.0% |
| ATTCAATAAAAGCAGCTGAT+TGG | + | chr8_3:3700214-3700233 | None:intergenic | 30.0% | |
| ! | TTTTATTGAATCTACGCTGA+TGG | - | chr8_3:3700223-3700242 | Msa1270270:intron | 30.0% |
| GTTATGAGGATAAATCAGAA+TGG | - | chr8_3:3700317-3700336 | Msa1270270:intron | 30.0% | |
| TATGAGGATAAATCAGAATG+GGG | - | chr8_3:3700319-3700338 | Msa1270270:intron | 30.0% | |
| ATTAAATGTAACCGCATTGT+CGG | + | chr8_3:3700423-3700442 | None:intergenic | 30.0% | |
| !!! | TTTGTTATTTTAGGCCCATT+AGG | - | chr8_3:3700814-3700833 | Msa1270270:CDS | 30.0% |
| !!! | TTGTTATTTTAGGCCCATTA+GGG | - | chr8_3:3700815-3700834 | Msa1270270:CDS | 30.0% |
| ACAACTGTTAAGCATACATA+GGG | + | chr8_3:3700851-3700870 | None:intergenic | 30.0% | |
| TACAACTGTTAAGCATACAT+AGG | + | chr8_3:3700852-3700871 | None:intergenic | 30.0% | |
| ! | AACCTGTCTCTTTATCTTTT+AGG | - | chr8_3:3700977-3700996 | Msa1270270:intron | 30.0% |
| AACCTAAAAGATAAAGAGAC+AGG | + | chr8_3:3700982-3701001 | None:intergenic | 30.0% | |
| ACAGAAACAATCTGAACAAA+AGG | - | chr8_3:3701225-3701244 | Msa1270270:CDS | 30.0% | |
| ! | AAAAAGTATAACAAGCACGT+CGG | - | chr8_3:3699853-3699872 | Msa1270270:CDS | 30.0% |
| !!! | ATGGATATTTTTTCAGGTTC+TGG | - | chr8_3:3700131-3700150 | Msa1270270:intron | 30.0% |
| ATTCAATAAAAGCAGCTGAT+TGG | + | chr8_3:3700214-3700233 | None:intergenic | 30.0% | |
| ! | TTTTATTGAATCTACGCTGA+TGG | - | chr8_3:3700223-3700242 | Msa1270270:intron | 30.0% |
| GTTATGAGGATAAATCAGAA+TGG | - | chr8_3:3700317-3700336 | Msa1270270:intron | 30.0% | |
| TATGAGGATAAATCAGAATG+GGG | - | chr8_3:3700319-3700338 | Msa1270270:intron | 30.0% | |
| ATTAAATGTAACCGCATTGT+CGG | + | chr8_3:3700423-3700442 | None:intergenic | 30.0% | |
| !!! | TTTGTTATTTTAGGCCCATT+AGG | - | chr8_3:3700814-3700833 | Msa1270270:CDS | 30.0% |
| !!! | TTGTTATTTTAGGCCCATTA+GGG | - | chr8_3:3700815-3700834 | Msa1270270:CDS | 30.0% |
| ACAACTGTTAAGCATACATA+GGG | + | chr8_3:3700851-3700870 | None:intergenic | 30.0% | |
| TACAACTGTTAAGCATACAT+AGG | + | chr8_3:3700852-3700871 | None:intergenic | 30.0% | |
| ! | AACCTGTCTCTTTATCTTTT+AGG | - | chr8_3:3700977-3700996 | Msa1270270:intron | 30.0% |
| AACCTAAAAGATAAAGAGAC+AGG | + | chr8_3:3700982-3701001 | None:intergenic | 30.0% | |
| ACAGAAACAATCTGAACAAA+AGG | - | chr8_3:3701225-3701244 | Msa1270270:CDS | 30.0% | |
| GATATTGAAGAAGGAGTAGA+AGG | - | chr8_3:3699904-3699923 | Msa1270270:CDS | 35.0% | |
| !!! | TTTTCAGGTTCTGGATTTGA+TGG | - | chr8_3:3700140-3700159 | Msa1270270:intron | 35.0% |
| ! | TACTCCAGAAACTCTTTTGA+AGG | - | chr8_3:3700271-3700290 | Msa1270270:intron | 35.0% |
| !! | CAGTTGATAGTATTGGAATG+TGG | + | chr8_3:3700608-3700627 | None:intergenic | 35.0% |
| !! | ATCTGCTCAGTTGATAGTAT+TGG | + | chr8_3:3700615-3700634 | None:intergenic | 35.0% |
| GGGAAATAACAAACCCTAAT+GGG | + | chr8_3:3700831-3700850 | None:intergenic | 35.0% | |
| AGGGAAATAACAAACCCTAA+TGG | + | chr8_3:3700832-3700851 | None:intergenic | 35.0% | |
| ! | TTTTCTAACATGATCAGCCA+TGG | - | chr8_3:3701068-3701087 | Msa1270270:intron | 35.0% |
| TTTCTAACATGATCAGCCAT+GGG | - | chr8_3:3701069-3701088 | Msa1270270:intron | 35.0% | |
| GAAACAATCTGAACAAAAGG+AGG | - | chr8_3:3701228-3701247 | Msa1270270:CDS | 35.0% | |
| GATATTGAAGAAGGAGTAGA+AGG | - | chr8_3:3699904-3699923 | Msa1270270:CDS | 35.0% | |
| !!! | TTTTCAGGTTCTGGATTTGA+TGG | - | chr8_3:3700140-3700159 | Msa1270270:intron | 35.0% |
| ! | TACTCCAGAAACTCTTTTGA+AGG | - | chr8_3:3700271-3700290 | Msa1270270:intron | 35.0% |
| !! | CAGTTGATAGTATTGGAATG+TGG | + | chr8_3:3700608-3700627 | None:intergenic | 35.0% |
| !! | ATCTGCTCAGTTGATAGTAT+TGG | + | chr8_3:3700615-3700634 | None:intergenic | 35.0% |
| GGGAAATAACAAACCCTAAT+GGG | + | chr8_3:3700831-3700850 | None:intergenic | 35.0% | |
| AGGGAAATAACAAACCCTAA+TGG | + | chr8_3:3700832-3700851 | None:intergenic | 35.0% | |
| ! | TTTTCTAACATGATCAGCCA+TGG | - | chr8_3:3701068-3701087 | Msa1270270:intron | 35.0% |
| TTTCTAACATGATCAGCCAT+GGG | - | chr8_3:3701069-3701088 | Msa1270270:intron | 35.0% | |
| GAAACAATCTGAACAAAAGG+AGG | - | chr8_3:3701228-3701247 | Msa1270270:CDS | 35.0% | |
| AGTCTGGAGGATATTGAAGA+AGG | - | chr8_3:3699895-3699914 | Msa1270270:CDS | 40.0% | |
| TTGAAGAAGGAGTAGAAGGT+AGG | - | chr8_3:3699908-3699927 | Msa1270270:CDS | 40.0% | |
| AACTATTATGCAACGAACGC+AGG | + | chr8_3:3699934-3699953 | None:intergenic | 40.0% | |
| ! | AGCTTGCTTTCTTGCTTCTT+TGG | - | chr8_3:3700033-3700052 | Msa1270270:intron | 40.0% |
| GAGGACCTTGAGAAAAGATT+CGG | - | chr8_3:3700188-3700207 | Msa1270270:intron | 40.0% | |
| ! | ATTGGCCGAATCTTTTCTCA+AGG | + | chr8_3:3700196-3700215 | None:intergenic | 40.0% |
| !! | TCCAGAAACTCTTTTGAAGG+AGG | - | chr8_3:3700274-3700293 | Msa1270270:intron | 40.0% |
| GGAGGCTATTATGTTATCAG+CGG | - | chr8_3:3700292-3700311 | Msa1270270:intron | 40.0% | |
| TAAATCAGAATGGGGAACAG+AGG | - | chr8_3:3700327-3700346 | Msa1270270:intron | 40.0% | |
| AACATGACATGGATCTCCTT+TGG | + | chr8_3:3700536-3700555 | None:intergenic | 40.0% | |
| AAGGAGATCCATGTCATGTT+CGG | - | chr8_3:3700536-3700555 | Msa1270270:intron | 40.0% | |
| TTATGTGTTCTTGATGCCTG+AGG | - | chr8_3:3700721-3700740 | Msa1270270:intron | 40.0% | |
| TATGTGTTCTTGATGCCTGA+GGG | - | chr8_3:3700722-3700741 | Msa1270270:intron | 40.0% | |
| ! | TCGAGATTTTCTCTCGATTC+TGG | - | chr8_3:3700914-3700933 | Msa1270270:CDS | 40.0% |
| ! | AGATTTTCTCTCGATTCTGG+TGG | - | chr8_3:3700917-3700936 | Msa1270270:CDS | 40.0% |
| ! | TTCGGAAACCCTTATTTGAC+AGG | - | chr8_3:3700942-3700961 | Msa1270270:CDS | 40.0% |
| ! | ACCCTTATTTGACAGGTTTG+CGG | - | chr8_3:3700949-3700968 | Msa1270270:CDS | 40.0% |
| !! | TAAAGCGCTGTCAGATCATA+TGG | - | chr8_3:3701151-3701170 | Msa1270270:intron | 40.0% |
| ! | TCTGTCGTTGTTGTTGTTGT+TGG | + | chr8_3:3701210-3701229 | None:intergenic | 40.0% |
| AAAAGGAGGAGAACCAATTC+CGG | - | chr8_3:3701242-3701261 | Msa1270270:CDS | 40.0% | |
| AGTCTGGAGGATATTGAAGA+AGG | - | chr8_3:3699895-3699914 | Msa1270270:CDS | 40.0% | |
| TTGAAGAAGGAGTAGAAGGT+AGG | - | chr8_3:3699908-3699927 | Msa1270270:CDS | 40.0% | |
| AACTATTATGCAACGAACGC+AGG | + | chr8_3:3699934-3699953 | None:intergenic | 40.0% | |
| ! | AGCTTGCTTTCTTGCTTCTT+TGG | - | chr8_3:3700033-3700052 | Msa1270270:intron | 40.0% |
| GAGGACCTTGAGAAAAGATT+CGG | - | chr8_3:3700188-3700207 | Msa1270270:intron | 40.0% | |
| ! | ATTGGCCGAATCTTTTCTCA+AGG | + | chr8_3:3700196-3700215 | None:intergenic | 40.0% |
| !! | TCCAGAAACTCTTTTGAAGG+AGG | - | chr8_3:3700274-3700293 | Msa1270270:intron | 40.0% |
| GGAGGCTATTATGTTATCAG+CGG | - | chr8_3:3700292-3700311 | Msa1270270:intron | 40.0% | |
| TAAATCAGAATGGGGAACAG+AGG | - | chr8_3:3700327-3700346 | Msa1270270:intron | 40.0% | |
| AACATGACATGGATCTCCTT+TGG | + | chr8_3:3700536-3700555 | None:intergenic | 40.0% | |
| AAGGAGATCCATGTCATGTT+CGG | - | chr8_3:3700536-3700555 | Msa1270270:intron | 40.0% | |
| TTATGTGTTCTTGATGCCTG+AGG | - | chr8_3:3700721-3700740 | Msa1270270:intron | 40.0% | |
| TATGTGTTCTTGATGCCTGA+GGG | - | chr8_3:3700722-3700741 | Msa1270270:intron | 40.0% | |
| ! | TCGAGATTTTCTCTCGATTC+TGG | - | chr8_3:3700914-3700933 | Msa1270270:CDS | 40.0% |
| ! | AGATTTTCTCTCGATTCTGG+TGG | - | chr8_3:3700917-3700936 | Msa1270270:CDS | 40.0% |
| ! | TTCGGAAACCCTTATTTGAC+AGG | - | chr8_3:3700942-3700961 | Msa1270270:CDS | 40.0% |
| ! | ACCCTTATTTGACAGGTTTG+CGG | - | chr8_3:3700949-3700968 | Msa1270270:CDS | 40.0% |
| !! | TAAAGCGCTGTCAGATCATA+TGG | - | chr8_3:3701151-3701170 | Msa1270270:intron | 40.0% |
| ! | TCTGTCGTTGTTGTTGTTGT+TGG | + | chr8_3:3701210-3701229 | None:intergenic | 40.0% |
| AAAAGGAGGAGAACCAATTC+CGG | - | chr8_3:3701242-3701261 | Msa1270270:CDS | 40.0% | |
| AGACTGAAGATCGACACAGT+TGG | + | chr8_3:3699880-3699899 | None:intergenic | 45.0% | |
| ! | AACTGTGTCGATCTTCAGTC+TGG | - | chr8_3:3699879-3699898 | Msa1270270:CDS | 45.0% |
| GAATCTACGCTGATGGAGAA+TGG | - | chr8_3:3700230-3700249 | Msa1270270:intron | 45.0% | |
| GCCTCCTTCAAAAGAGTTTC+TGG | + | chr8_3:3700278-3700297 | None:intergenic | 45.0% | |
| GGCTATTATGTTATCAGCGG+TGG | - | chr8_3:3700295-3700314 | Msa1270270:intron | 45.0% | |
| TGTTATCAGCGGTGGTTATG+AGG | - | chr8_3:3700303-3700322 | Msa1270270:intron | 45.0% | |
| ATCGAAAGCTAAGCGTGTCT+AGG | - | chr8_3:3700395-3700414 | Msa1270270:intron | 45.0% | |
| TCGAAAGCTAAGCGTGTCTA+GGG | - | chr8_3:3700396-3700415 | Msa1270270:intron | 45.0% | |
| CAATGACACCGAACATGACA+TGG | + | chr8_3:3700547-3700566 | None:intergenic | 45.0% | |
| !! | CTCTCGATTCTGGTGGATTT+CGG | - | chr8_3:3700924-3700943 | Msa1270270:CDS | 45.0% |
| GCCGCAAACCTGTCAAATAA+GGG | + | chr8_3:3700953-3700972 | None:intergenic | 45.0% | |
| AGCCGCAAACCTGTCAAATA+AGG | + | chr8_3:3700954-3700973 | None:intergenic | 45.0% | |
| TGATACCAACTGACGCAGTA+CGG | + | chr8_3:3701027-3701046 | None:intergenic | 45.0% | |
| !! | CGTCATAAGTTGATCTCCCA+TGG | + | chr8_3:3701088-3701107 | None:intergenic | 45.0% |
| TGGGAGATCAACTTATGACG+AGG | - | chr8_3:3701088-3701107 | Msa1270270:intron | 45.0% | |
| GGGAGATCAACTTATGACGA+GGG | - | chr8_3:3701089-3701108 | Msa1270270:intron | 45.0% | |
| TAATGTCGTGGTAAGAGTCG+CGG | + | chr8_3:3701133-3701152 | None:intergenic | 45.0% | |
| TATGGCAGCGTGGACAATTA+AGG | - | chr8_3:3701169-3701188 | Msa1270270:intron | 45.0% | |
| AGACTGAAGATCGACACAGT+TGG | + | chr8_3:3699880-3699899 | None:intergenic | 45.0% | |
| ! | AACTGTGTCGATCTTCAGTC+TGG | - | chr8_3:3699879-3699898 | Msa1270270:CDS | 45.0% |
| GAATCTACGCTGATGGAGAA+TGG | - | chr8_3:3700230-3700249 | Msa1270270:intron | 45.0% | |
| GCCTCCTTCAAAAGAGTTTC+TGG | + | chr8_3:3700278-3700297 | None:intergenic | 45.0% | |
| GGCTATTATGTTATCAGCGG+TGG | - | chr8_3:3700295-3700314 | Msa1270270:intron | 45.0% | |
| TGTTATCAGCGGTGGTTATG+AGG | - | chr8_3:3700303-3700322 | Msa1270270:intron | 45.0% | |
| ATCGAAAGCTAAGCGTGTCT+AGG | - | chr8_3:3700395-3700414 | Msa1270270:intron | 45.0% | |
| TCGAAAGCTAAGCGTGTCTA+GGG | - | chr8_3:3700396-3700415 | Msa1270270:intron | 45.0% | |
| CAATGACACCGAACATGACA+TGG | + | chr8_3:3700547-3700566 | None:intergenic | 45.0% | |
| !! | CTCTCGATTCTGGTGGATTT+CGG | - | chr8_3:3700924-3700943 | Msa1270270:CDS | 45.0% |
| GCCGCAAACCTGTCAAATAA+GGG | + | chr8_3:3700953-3700972 | None:intergenic | 45.0% | |
| AGCCGCAAACCTGTCAAATA+AGG | + | chr8_3:3700954-3700973 | None:intergenic | 45.0% | |
| TGATACCAACTGACGCAGTA+CGG | + | chr8_3:3701027-3701046 | None:intergenic | 45.0% | |
| !! | CGTCATAAGTTGATCTCCCA+TGG | + | chr8_3:3701088-3701107 | None:intergenic | 45.0% |
| TGGGAGATCAACTTATGACG+AGG | - | chr8_3:3701088-3701107 | Msa1270270:intron | 45.0% | |
| GGGAGATCAACTTATGACGA+GGG | - | chr8_3:3701089-3701108 | Msa1270270:intron | 45.0% | |
| TAATGTCGTGGTAAGAGTCG+CGG | + | chr8_3:3701133-3701152 | None:intergenic | 45.0% | |
| TATGGCAGCGTGGACAATTA+AGG | - | chr8_3:3701169-3701188 | Msa1270270:intron | 45.0% | |
| ! | TGTGTCGATCTTCAGTCTGG+AGG | - | chr8_3:3699882-3699901 | Msa1270270:CDS | 50.0% |
| AGCACAACGTATGTCACGAG+AGG | - | chr8_3:3700169-3700188 | Msa1270270:intron | 50.0% | |
| TCTACGCTGATGGAGAATGG+TGG | - | chr8_3:3700233-3700252 | Msa1270270:intron | 50.0% | |
| !! | GTTTCTGGAGTAGCACTCTG+AGG | + | chr8_3:3700263-3700282 | None:intergenic | 50.0% |
| ATCAGAATGGGGAACAGAGG+TGG | - | chr8_3:3700330-3700349 | Msa1270270:intron | 50.0% | |
| TCAGAATGGGGAACAGAGGT+GGG | - | chr8_3:3700331-3700350 | Msa1270270:intron | 50.0% | |
| CTGACAGCGCTTTAATGTCG+TGG | + | chr8_3:3701145-3701164 | None:intergenic | 50.0% | |
| TGTCAGATCATATGGCAGCG+TGG | - | chr8_3:3701159-3701178 | Msa1270270:intron | 50.0% | |
| ! | TGTGTCGATCTTCAGTCTGG+AGG | - | chr8_3:3699882-3699901 | Msa1270270:CDS | 50.0% |
| AGCACAACGTATGTCACGAG+AGG | - | chr8_3:3700169-3700188 | Msa1270270:intron | 50.0% | |
| TCTACGCTGATGGAGAATGG+TGG | - | chr8_3:3700233-3700252 | Msa1270270:intron | 50.0% | |
| !! | GTTTCTGGAGTAGCACTCTG+AGG | + | chr8_3:3700263-3700282 | None:intergenic | 50.0% |
| ATCAGAATGGGGAACAGAGG+TGG | - | chr8_3:3700330-3700349 | Msa1270270:intron | 50.0% | |
| TCAGAATGGGGAACAGAGGT+GGG | - | chr8_3:3700331-3700350 | Msa1270270:intron | 50.0% | |
| CTGACAGCGCTTTAATGTCG+TGG | + | chr8_3:3701145-3701164 | None:intergenic | 50.0% | |
| TGTCAGATCATATGGCAGCG+TGG | - | chr8_3:3701159-3701178 | Msa1270270:intron | 50.0% | |
| GTGTCTAGGGACCGACAATG+CGG | - | chr8_3:3700409-3700428 | Msa1270270:intron | 55.0% | |
| CTGACGCAGTACGGAAGCAA+GGG | + | chr8_3:3701018-3701037 | None:intergenic | 55.0% | |
| ACTGACGCAGTACGGAAGCA+AGG | + | chr8_3:3701019-3701038 | None:intergenic | 55.0% | |
| TGCTTCCGTACTGCGTCAGT+TGG | - | chr8_3:3701019-3701038 | Msa1270270:intron | 55.0% | |
| ! | GCGTCAGTTGGTATCAGAGC+AGG | - | chr8_3:3701031-3701050 | Msa1270270:intron | 55.0% |
| ATGACGAGGGCAGAGTTTGC+CGG | - | chr8_3:3701102-3701121 | Msa1270270:intron | 55.0% | |
| GGTAAGAGTCGCGGTTATGC+CGG | + | chr8_3:3701124-3701143 | None:intergenic | 55.0% | |
| GTGTCTAGGGACCGACAATG+CGG | - | chr8_3:3700409-3700428 | Msa1270270:intron | 55.0% | |
| CTGACGCAGTACGGAAGCAA+GGG | + | chr8_3:3701018-3701037 | None:intergenic | 55.0% | |
| ACTGACGCAGTACGGAAGCA+AGG | + | chr8_3:3701019-3701038 | None:intergenic | 55.0% | |
| TGCTTCCGTACTGCGTCAGT+TGG | - | chr8_3:3701019-3701038 | Msa1270270:intron | 55.0% | |
| ! | GCGTCAGTTGGTATCAGAGC+AGG | - | chr8_3:3701031-3701050 | Msa1270270:intron | 55.0% |
| ATGACGAGGGCAGAGTTTGC+CGG | - | chr8_3:3701102-3701121 | Msa1270270:intron | 55.0% | |
| GGTAAGAGTCGCGGTTATGC+CGG | + | chr8_3:3701124-3701143 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 3699850 | 3701271 | 3699850 | ID=Msa1270270;Name=Msa1270270 |
| chr8_3 | mRNA | 3699850 | 3701271 | 3699850 | ID=Msa1270270-mRNA-1;Parent=Msa1270270;Name=Msa1270270-mRNA-1;_AED=0.79;_eAED=0.82;_QI=0|0|0|0.33|1|1|3|0|154 |
| chr8_3 | exon | 3701196 | 3701271 | 3701196 | ID=Msa1270270-mRNA-1:exon:1183;Parent=Msa1270270-mRNA-1 |
| chr8_3 | exon | 3700773 | 3700974 | 3700773 | ID=Msa1270270-mRNA-1:exon:1182;Parent=Msa1270270-mRNA-1 |
| chr8_3 | exon | 3699850 | 3700036 | 3699850 | ID=Msa1270270-mRNA-1:exon:1181;Parent=Msa1270270-mRNA-1 |
| chr8_3 | CDS | 3701196 | 3701271 | 3701196 | ID=Msa1270270-mRNA-1:cds;Parent=Msa1270270-mRNA-1 |
| chr8_3 | CDS | 3700773 | 3700974 | 3700773 | ID=Msa1270270-mRNA-1:cds;Parent=Msa1270270-mRNA-1 |
| chr8_3 | CDS | 3699850 | 3700036 | 3699850 | ID=Msa1270270-mRNA-1:cds;Parent=Msa1270270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
