Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73243.t1 | KEH28966.1 | 93.7 | 268 | 15 | 1 | 1 | 266 | 1 | 268 | 3.20E-98 | 368.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73243.t1 | P93447 | 80.3 | 229 | 42 | 1 | 1 | 229 | 1 | 226 | 2.3e-65 | 250.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73243.t1 | A0A072UHR3 | 93.7 | 268 | 15 | 1 | 1 | 266 | 1 | 268 | 2.3e-98 | 368.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene73243 | 0.816389 | 5.67E-52 | -1.69E-46 |
| MS.gene049340 | MS.gene73243 | 0.817194 | 3.74E-52 | -1.69E-46 |
| MS.gene049341 | MS.gene73243 | 0.828704 | 7.75E-55 | -1.69E-46 |
| MS.gene049808 | MS.gene73243 | 0.800933 | 1.14E-48 | -1.69E-46 |
| MS.gene049825 | MS.gene73243 | 0.800322 | 1.52E-48 | -1.69E-46 |
| MS.gene050277 | MS.gene73243 | 0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene050437 | MS.gene73243 | 0.801361 | 9.34E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene73243 | 0.802618 | 5.15E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene73243 | 0.800646 | 1.31E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene73243 | 0.811811 | 5.81E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene73243 | 0.834521 | 2.86E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene73243 | 0.801637 | 8.20E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene73243 | 0.802574 | 5.26E-49 | -1.69E-46 |
| MS.gene051241 | MS.gene73243 | 0.80392 | 2.77E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene73243 | 0.82536 | 4.89E-54 | -1.69E-46 |
| MS.gene05134 | MS.gene73243 | 0.832326 | 1.01E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene73243 | 0.801474 | 8.85E-49 | -1.69E-46 |
| MS.gene051746 | MS.gene73243 | 0.801487 | 8.80E-49 | -1.69E-46 |
| MS.gene051903 | MS.gene73243 | 0.816166 | 6.36E-52 | -1.69E-46 |
| MS.gene052133 | MS.gene73243 | 0.853022 | 3.14E-61 | -1.69E-46 |
| MS.gene052879 | MS.gene73243 | 0.82337 | 1.44E-53 | -1.69E-46 |
| MS.gene052880 | MS.gene73243 | 0.808714 | 2.70E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene73243 | 0.872592 | 2.83E-67 | -1.69E-46 |
| MS.gene053122 | MS.gene73243 | 0.808555 | 2.92E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene73243 | 0.830991 | 2.15E-55 | -1.69E-46 |
| MS.gene05364 | MS.gene73243 | 0.817015 | 4.11E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene73243 | 0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene73243 | 0.805322 | 1.41E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene73243 | 0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene73243 | 0.827746 | 1.32E-54 | -1.69E-46 |
| MS.gene055555 | MS.gene73243 | 0.838141 | 3.43E-57 | -1.69E-46 |
| MS.gene055580 | MS.gene73243 | -0.827953 | 1.18E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene73243 | 0.805317 | 1.42E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene73243 | -0.822845 | 1.91E-53 | -1.69E-46 |
| MS.gene056075 | MS.gene73243 | 0.855229 | 7.26E-62 | -1.69E-46 |
| MS.gene056215 | MS.gene73243 | 0.809651 | 1.70E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene73243 | 0.874289 | 7.59E-68 | -1.69E-46 |
| MS.gene058216 | MS.gene73243 | 0.806465 | 8.12E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene73243 | 0.83995 | 1.17E-57 | -1.69E-46 |
| MS.gene059227 | MS.gene73243 | 0.809604 | 1.74E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene73243 | 0.839017 | 2.04E-57 | -1.69E-46 |
| MS.gene060429 | MS.gene73243 | 0.86639 | 2.95E-65 | -1.69E-46 |
| MS.gene060587 | MS.gene73243 | 0.805847 | 1.10E-49 | -1.69E-46 |
| MS.gene060917 | MS.gene73243 | 0.857875 | 1.21E-62 | -1.69E-46 |
| MS.gene061176 | MS.gene73243 | 0.83626 | 1.04E-56 | -1.69E-46 |
| MS.gene061177 | MS.gene73243 | 0.837114 | 6.29E-57 | -1.69E-46 |
| MS.gene061178 | MS.gene73243 | 0.835831 | 1.33E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene001097 | MS.gene73243 | PPI |
| MS.gene73243 | MS.gene68663 | PPI |
| MS.gene47052 | MS.gene73243 | PPI |
| MS.gene036405 | MS.gene73243 | PPI |
| MS.gene057052 | MS.gene73243 | PPI |
| MS.gene73243 | MS.gene54761 | PPI |
| MS.gene005994 | MS.gene73243 | PPI |
| MS.gene34008 | MS.gene73243 | PPI |
| MS.gene005996 | MS.gene73243 | PPI |
| MS.gene73243 | MS.gene041766 | PPI |
| MS.gene39764 | MS.gene73243 | PPI |
| MS.gene058469 | MS.gene73243 | PPI |
| MS.gene37588 | MS.gene73243 | PPI |
| MS.gene33103 | MS.gene73243 | PPI |
| MS.gene73243 | MS.gene037669 | PPI |
| MS.gene048096 | MS.gene73243 | PPI |
| MS.gene47051 | MS.gene73243 | PPI |
| MS.gene041771 | MS.gene73243 | PPI |
| MS.gene73243 | MS.gene048096 | PPI |
| MS.gene016105 | MS.gene73243 | PPI |
| MS.gene001098 | MS.gene73243 | PPI |
| MS.gene81545 | MS.gene73243 | PPI |
| MS.gene016914 | MS.gene73243 | PPI |
| MS.gene73243 | MS.gene92572 | PPI |
| MS.gene54763 | MS.gene73243 | PPI |
| MS.gene074184 | MS.gene73243 | PPI |
| MS.gene006000 | MS.gene73243 | PPI |
| MS.gene043773 | MS.gene73243 | PPI |
| MS.gene041769 | MS.gene73243 | PPI |
| MS.gene73243 | MS.gene074183 | PPI |
| MS.gene34006 | MS.gene73243 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73243.t1 | MTR_4g019610 | 94.030 | 268 | 14 | 1 | 1 | 266 | 1 | 268 | 5.53e-162 | 450 |
| MS.gene73243.t1 | MTR_2g461200 | 96.970 | 231 | 5 | 1 | 1 | 229 | 1 | 231 | 9.13e-161 | 446 |
| MS.gene73243.t1 | MTR_2g461200 | 96.970 | 231 | 5 | 1 | 1 | 229 | 1 | 231 | 1.06e-160 | 446 |
| MS.gene73243.t1 | MTR_4g019610 | 96.537 | 231 | 6 | 1 | 1 | 229 | 1 | 231 | 8.24e-160 | 443 |
| MS.gene73243.t1 | MTR_2g461200 | 94.444 | 180 | 8 | 1 | 1 | 178 | 1 | 180 | 7.78e-95 | 277 |
| MS.gene73243.t1 | MTR_5g088660 | 59.825 | 229 | 86 | 3 | 1 | 229 | 1 | 223 | 8.92e-81 | 243 |
| MS.gene73243.t1 | MTR_5g088685 | 75.000 | 48 | 12 | 0 | 131 | 178 | 2 | 49 | 8.44e-18 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73243.t1 | AT2G18110 | 80.263 | 228 | 42 | 2 | 5 | 229 | 4 | 231 | 5.46e-111 | 320 |
| MS.gene73243.t1 | AT1G30230 | 77.193 | 228 | 49 | 2 | 5 | 229 | 4 | 231 | 1.89e-105 | 306 |
| MS.gene73243.t1 | AT1G30230 | 73.279 | 247 | 60 | 3 | 5 | 248 | 4 | 247 | 1.99e-105 | 306 |
| MS.gene73243.t1 | AT5G12110 | 61.304 | 230 | 86 | 3 | 1 | 229 | 1 | 228 | 6.84e-78 | 236 |
| MS.gene73243.t1 | AT5G19510 | 62.009 | 229 | 82 | 2 | 1 | 229 | 1 | 224 | 1.84e-72 | 221 |
Find 66 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGTCTCTAGTGGTGTTTC+TGG | 0.142603 | 4.1:+78602814 | MS.gene73243:intron |
| TTCAGTTGGAAGGGTTGTTC+TGG | 0.178098 | 4.1:+78603209 | MS.gene73243:CDS |
| TCAGTTCCATCATATGAATA+TGG | 0.245099 | 4.1:+78602594 | MS.gene73243:CDS |
| TAATGCTATATCAAATTCTT+TGG | 0.299454 | 4.1:+78605773 | MS.gene73243:CDS |
| TCTTGTTTCCGTTGACAATA+TGG | 0.314177 | 4.1:+78605611 | MS.gene73243:CDS |
| TTCTTTATACCGTACCCAAC+AGG | 0.354682 | 4.1:-78605558 | None:intergenic |
| GCTGCCTTTGTGTCAGAAAC+TGG | 0.355924 | 4.1:-78602898 | None:intergenic |
| TCAGTTGGAAGGGTTGTTCT+GGG | 0.356979 | 4.1:+78603210 | MS.gene73243:CDS |
| TATAACCTTAAGGCTGAATC+TGG | 0.393170 | 4.1:+78602389 | MS.gene73243:CDS |
| GAAGAAGGCAGCTGAGGAAC+GGG | 0.395604 | 4.1:+78602975 | MS.gene73243:CDS |
| GATGACGATGTTGATTTGTT+TGG | 0.410866 | 4.1:+78602934 | MS.gene73243:CDS |
| TCAAGCCAGATTCAGCCTTA+AGG | 0.411025 | 4.1:-78602394 | None:intergenic |
| TCAAATTATGCTTACTATTG+TGG | 0.416944 | 4.1:+78605584 | MS.gene73243:CDS |
| GGTGTTTCTGGTGAGGGATC+TGG | 0.436594 | 4.1:+78602826 | MS.gene73243:CDS |
| GCAGCAGCCGTGAAGGCATC+CGG | 0.445711 | 4.1:+78602997 | MS.gene73243:CDS |
| AGTCACATTCTATAACCTTA+AGG | 0.451347 | 4.1:+78602379 | MS.gene73243:CDS |
| ATTATTAGAAATGACAATCA+AGG | 0.452951 | 4.1:+78605851 | MS.gene73243:CDS |
| ACTCTGGACATACTCGTTGA+TGG | 0.453826 | 4.1:-78605658 | None:intergenic |
| CAGTTCCATCATATGAATAT+GGG | 0.459928 | 4.1:+78602595 | MS.gene73243:CDS |
| GTACCCAACAGGGACAAGTT+TGG | 0.474254 | 4.1:-78605547 | None:intergenic |
| CAGCCAAACTTGTCCCTGTT+GGG | 0.476052 | 4.1:+78605544 | MS.gene73243:intron |
| TTCCGTTGACAATATGGTTG+AGG | 0.479405 | 4.1:+78605617 | MS.gene73243:CDS |
| TAATGTCATCCTTTGAAGCT+TGG | 0.497827 | 4.1:-78602551 | None:intergenic |
| AGCAGTGAGATCTGTTCAGT+TGG | 0.499725 | 4.1:+78603195 | MS.gene73243:CDS |
| ACATTCCCATATTCATATGA+TGG | 0.500557 | 4.1:-78602600 | None:intergenic |
| TCTAGTGGTGTTTCTGGTGA+GGG | 0.507451 | 4.1:+78602820 | MS.gene73243:intron |
| GTGAGATCTGTTCAGTTGGA+AGG | 0.509565 | 4.1:+78603199 | MS.gene73243:CDS |
| TGGAAAATCATCTGTACTGT+TGG | 0.509794 | 4.1:+78603126 | MS.gene73243:CDS |
| TGCAGAATTTGCAATTCGTA+TGG | 0.510245 | 4.1:+78605796 | MS.gene73243:CDS |
| AGAAGAAGGCAGCTGAGGAA+CGG | 0.514292 | 4.1:+78602974 | MS.gene73243:CDS |
| TTCTTCGAGCTTCTTCATGT+CGG | 0.515820 | 4.1:-78603173 | None:intergenic |
| CTCTAGTGGTGTTTCTGGTG+AGG | 0.518639 | 4.1:+78602819 | MS.gene73243:intron |
| TATTCATATGATGGAACTGA+TGG | 0.520528 | 4.1:-78602591 | None:intergenic |
| AGAGACTGAGGAAGAGAAGA+AGG | 0.523236 | 4.1:+78602960 | MS.gene73243:CDS |
| GTTTAGGTACCAAGCTTCAA+AGG | 0.531194 | 4.1:+78602542 | MS.gene73243:intron |
| ATGTCGGTTTCATCATCCCA+TGG | 0.531275 | 4.1:-78603157 | None:intergenic |
| CTCACACGCAGTTACATCAC+TGG | 0.535094 | 4.1:+78602437 | MS.gene73243:CDS |
| ACAGCCAAACTTGTCCCTGT+TGG | 0.544104 | 4.1:+78605543 | MS.gene73243:intron |
| CTCTGGACATACTCGTTGAT+GGG | 0.546234 | 4.1:-78605657 | None:intergenic |
| AAACTTGTCCCTGTTGGGTA+CGG | 0.548491 | 4.1:+78605549 | MS.gene73243:CDS |
| CAGTTGGAAGGGTTGTTCTG+GGG | 0.550288 | 4.1:+78603211 | MS.gene73243:CDS |
| TTCTGACACAAAGGCAGCTG+AGG | 0.553231 | 4.1:+78602903 | MS.gene73243:CDS |
| TACTGTTGGATGTGAAGCCA+TGG | 0.557522 | 4.1:+78603140 | MS.gene73243:CDS |
| AATTTGCAATTCGTATGGCA+TGG | 0.560377 | 4.1:+78605801 | MS.gene73243:CDS |
| GGAACGGGCAGCAGCCGTGA+AGG | 0.572363 | 4.1:+78602990 | MS.gene73243:CDS |
| TGAGATCTGTTCAGTTGGAA+GGG | 0.572783 | 4.1:+78603200 | MS.gene73243:CDS |
| TTATTAGAAATGACAATCAA+GGG | 0.582016 | 4.1:+78605852 | MS.gene73243:CDS |
| ATCCTCAACCATATTGTCAA+CGG | 0.584339 | 4.1:-78605619 | None:intergenic |
| AGGCCACAATGTCACAACTC+TGG | 0.585892 | 4.1:-78605674 | None:intergenic |
| CACCGTGGAATCTTCTCTTG+TGG | 0.597197 | 4.1:+78602852 | MS.gene73243:CDS |
| ATGAATATGGGAATGTTGCT+AGG | 0.597917 | 4.1:+78602607 | MS.gene73243:CDS |
| TGGCATGGAGATCATTGTAG+TGG | 0.602926 | 4.1:+78605816 | MS.gene73243:CDS |
| GGAAGAGAAGAAGGCAGCTG+AGG | 0.604357 | 4.1:+78602969 | MS.gene73243:CDS |
| TGTGTCAGAAACTGGAGGAG+TGG | 0.624152 | 4.1:-78602890 | None:intergenic |
| GGCATGGAGATCATTGTAGT+GGG | 0.628783 | 4.1:+78605817 | MS.gene73243:CDS |
| TCCTCCAGTTTCTGACACAA+AGG | 0.631021 | 4.1:+78602894 | MS.gene73243:CDS |
| GCCTTTGTGTCAGAAACTGG+AGG | 0.631902 | 4.1:-78602895 | None:intergenic |
| TCACACGCAGTTACATCACT+GGG | 0.638579 | 4.1:+78602438 | MS.gene73243:CDS |
| TGTCCAGAGTTGTGACATTG+TGG | 0.639251 | 4.1:+78605671 | MS.gene73243:CDS |
| TCTTTATACCGTACCCAACA+GGG | 0.645173 | 4.1:-78605557 | None:intergenic |
| TGATGTAACTGCGTGTGAGA+AGG | 0.646574 | 4.1:-78602433 | None:intergenic |
| AGCCACAAGAGAAGATTCCA+CGG | 0.646775 | 4.1:-78602854 | None:intergenic |
| ACTGTTGGATGTGAAGCCAT+GGG | 0.650142 | 4.1:+78603141 | MS.gene73243:CDS |
| TTTGTTTGGTGAAGAGACTG+AGG | 0.673347 | 4.1:+78602948 | MS.gene73243:CDS |
| TGAGGGATCTGGTGTCACCG+TGG | 0.761218 | 4.1:+78602837 | MS.gene73243:CDS |
| AATATGGGAATGTTGCTAGG+TGG | 0.778608 | 4.1:+78602610 | MS.gene73243:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATCTAAATAATAAAAAA+AGG | + | chr4.1:78604694-78604713 | MS.gene73243:intron | 10.0% |
| !! | CTAATCTAAATAATAAAAAA+AGG | - | chr4.1:78604713-78604694 | None:intergenic | 10.0% |
| !!! | GTAAATTAACATTTTTTTTT+AGG | - | chr4.1:78604649-78604668 | None:intergenic | 10.0% |
| !!! | GTAAATTAACTTTTTTTTTT+GGG | + | chr4.1:78603712-78603731 | MS.gene73243:intron | 10.0% |
| !!! | TGTAAATTAACTTTTTTTTT+TGG | + | chr4.1:78603711-78603730 | MS.gene73243:intron | 10.0% |
| !!! | TTAAGTTCTAATTTTTTTAT+GGG | - | chr4.1:78604729-78604748 | None:intergenic | 10.0% |
| !!! | TTTAAGTTCTAATTTTTTTA+TGG | - | chr4.1:78604730-78604749 | None:intergenic | 10.0% |
| !! | ATAAAAACAGATGAAAATAA+AGG | + | chr4.1:78605083-78605102 | MS.gene73243:intron | 15.0% |
| !! | ATCTAAATAATAAAAAAAGG+AGG | + | chr4.1:78604697-78604716 | MS.gene73243:intron | 15.0% |
| !! | ATCTAAATAATAAAAAAAGG+AGG | - | chr4.1:78604716-78604697 | None:intergenic | 15.0% |
| !! | TAATTCAAATGAATTGTATT+CGG | + | chr4.1:78602754-78602773 | MS.gene73243:intron | 15.0% |
| !!! | ATTGAAAAACAGTAATTTTA+TGG | - | chr4.1:78605371-78605390 | None:intergenic | 15.0% |
| !!! | TAAGTTCTAATTTTTTTATG+GGG | - | chr4.1:78604728-78604747 | None:intergenic | 15.0% |
| !!! | TATAATAAAGATTTTGTTTG+CGG | + | chr4.1:78602724-78602743 | MS.gene73243:intron | 15.0% |
| !!! | TGTTTTTATTTGATTTGTTT+AGG | + | chr4.1:78602526-78602545 | MS.gene73243:intron | 15.0% |
| !!! | TTGCTATTACAAAAAAAAAA+AGG | - | chr4.1:78603754-78603773 | None:intergenic | 15.0% |
| !!! | TTTTATAAATTCCATTTAGT+TGG | - | chr4.1:78604922-78604941 | None:intergenic | 15.0% |
| !! | AATGTGTAAAAAGATAAGAA+CGG | - | chr4.1:78603262-78603281 | None:intergenic | 20.0% |
| !! | AATTCTAACCCAAAAAAATT+TGG | + | chr4.1:78604617-78604636 | MS.gene73243:intron | 20.0% |
| !! | AGAGACACAAAATTAAAATT+TGG | - | chr4.1:78602803-78602822 | None:intergenic | 20.0% |
| !! | ATTATTAGAAATGACAATCA+AGG | + | chr4.1:78605851-78605870 | MS.gene73243:CDS | 20.0% |
| !! | CAAAAAAAAAGGGATAAAAA+AGG | + | chr4.1:78604591-78604610 | MS.gene73243:intron | 20.0% |
| !! | CATATAAAATTGTAGCAAAA+GGG | + | chr4.1:78604976-78604995 | MS.gene73243:intron | 20.0% |
| !! | TAATGCTATATCAAATTCTT+TGG | + | chr4.1:78605773-78605792 | MS.gene73243:CDS | 20.0% |
| !! | TATGAATAATTGACAAAGAT+CGG | - | chr4.1:78602681-78602700 | None:intergenic | 20.0% |
| !! | TGGATAAAAAATTAGACTAT+TGG | - | chr4.1:78603471-78603490 | None:intergenic | 20.0% |
| !! | TTATTAGAAATGACAATCAA+GGG | + | chr4.1:78605852-78605871 | MS.gene73243:CDS | 20.0% |
| !!! | AAGTAATTTTCAGATGTTAT+TGG | + | chr4.1:78605711-78605730 | MS.gene73243:intron | 20.0% |
| !!! | ACTTGCTATTACAAAAAAAA+AGG | + | chr4.1:78604580-78604599 | MS.gene73243:intron | 20.0% |
| !!! | CTTGCTATTACAAAAAAAAA+GGG | + | chr4.1:78604581-78604600 | MS.gene73243:intron | 20.0% |
| !!! | GTCTAATTTTTTATCCAAAA+TGG | + | chr4.1:78603474-78603493 | MS.gene73243:intron | 20.0% |
| !!! | TATGTTTTTTTGTTCTTCAT+AGG | + | chr4.1:78602466-78602485 | MS.gene73243:intron | 20.0% |
| ! | ATAATAAAAAAAGGAGGATG+AGG | - | chr4.1:78603658-78603677 | None:intergenic | 25.0% |
| ! | ATGAAAATAAAGGAGAAAGA+AGG | + | chr4.1:78605093-78605112 | MS.gene73243:intron | 25.0% |
| ! | CCATATAAAATTGTAGCAAA+AGG | + | chr4.1:78604975-78604994 | MS.gene73243:intron | 25.0% |
| ! | TCAAATTATGCTTACTATTG+TGG | + | chr4.1:78605584-78605603 | MS.gene73243:CDS | 25.0% |
| ! | TGTTGTATACTATTCTTCAA+GGG | + | chr4.1:78603352-78603371 | MS.gene73243:intron | 25.0% |
| ! | TTGATTTCCATTGAAAAACT+CGG | + | chr4.1:78605009-78605028 | MS.gene73243:intron | 25.0% |
| ! | TTGTTGTATACTATTCTTCA+AGG | + | chr4.1:78603351-78603370 | MS.gene73243:intron | 25.0% |
| !! | CCTTTTGCTACAATTTTATA+TGG | - | chr4.1:78604978-78604997 | None:intergenic | 25.0% |
| !! | TTACTTACAGATTTTGTTGA+AGG | - | chr4.1:78605697-78605716 | None:intergenic | 25.0% |
| !! | TTTTGTAATAGCAAGTACAT+GGG | + | chr4.1:78603760-78603779 | MS.gene73243:intron | 25.0% |
| !! | TTTTGTAATAGCAAGTACAT+GGG | - | chr4.1:78603779-78603760 | None:intergenic | 25.0% |
| !! | TTTTTGTAATAGCAAGTACA+TGG | + | chr4.1:78603759-78603778 | MS.gene73243:intron | 25.0% |
| !! | TTTTTGTAATAGCAAGTACA+TGG | - | chr4.1:78603778-78603759 | None:intergenic | 25.0% |
| !!! | AAAGTTTGTTTTCACCATTT+TGG | - | chr4.1:78603491-78603510 | None:intergenic | 25.0% |
| !!! | ACTCATAATTTGTTGAAATC+TGG | + | chr4.1:78603056-78603075 | MS.gene73243:intron | 25.0% |
| !!! | AGGATGATACCAAATTTTTT+TGG | - | chr4.1:78604629-78604648 | None:intergenic | 25.0% |
| !!! | ATAATTTGTTGAAATCTGGT+TGG | + | chr4.1:78603060-78603079 | MS.gene73243:intron | 25.0% |
| !!! | GGATGATACCAAATTTTTTT+GGG | - | chr4.1:78604628-78604647 | None:intergenic | 25.0% |
| !!! | TTTTAATTTTGTGTCTCTAG+TGG | + | chr4.1:78602805-78602824 | MS.gene73243:intron | 25.0% |
| AAACTTGCACAATTTCAACA+AGG | + | chr4.1:78603997-78604016 | MS.gene73243:intron | 30.0% | |
| AAACTTGCACAATTTCAACA+AGG | - | chr4.1:78604016-78603997 | None:intergenic | 30.0% | |
| ACATTCCCATATTCATATGA+TGG | - | chr4.1:78602603-78602622 | None:intergenic | 30.0% | |
| AGAAGAAAGAAACACAAAGA+GGG | - | chr4.1:78603559-78603578 | None:intergenic | 30.0% | |
| AGTCACATTCTATAACCTTA+AGG | + | chr4.1:78602379-78602398 | MS.gene73243:CDS | 30.0% | |
| ATAATTGACAAAGATCGGAA+TGG | - | chr4.1:78602676-78602695 | None:intergenic | 30.0% | |
| CACGTAAAAATGTTGTAGAA+GGG | + | chr4.1:78604877-78604896 | MS.gene73243:intron | 30.0% | |
| CAGTTCCATCATATGAATAT+GGG | + | chr4.1:78602595-78602614 | MS.gene73243:CDS | 30.0% | |
| GTTAACTTCAAAAGGAGTTT+GGG | + | chr4.1:78603974-78603993 | MS.gene73243:intron | 30.0% | |
| GTTAACTTCAAAAGGAGTTT+GGG | - | chr4.1:78603993-78603974 | None:intergenic | 30.0% | |
| TAAATTCCATTTAGTTGGCA+CGG | - | chr4.1:78604917-78604936 | None:intergenic | 30.0% | |
| TAATTGACAAAGATCGGAAT+GGG | - | chr4.1:78602675-78602694 | None:intergenic | 30.0% | |
| TCAGTTCCATCATATGAATA+TGG | + | chr4.1:78602594-78602613 | MS.gene73243:CDS | 30.0% | |
| TTTGATCTGTCTCAAAGAAT+GGG | + | chr4.1:78604513-78604532 | MS.gene73243:intron | 30.0% | |
| ! | ACATTTTTACGTGGTTGTTT+TGG | - | chr4.1:78604870-78604889 | None:intergenic | 30.0% |
| ! | ACCTAGTCATTTAAAATCAG+CGG | - | chr4.1:78604488-78604507 | None:intergenic | 30.0% |
| ! | CTTACTTTCTTTCTTTTTGC+CGG | - | chr4.1:78603019-78603038 | None:intergenic | 30.0% |
| ! | TATTCATATGATGGAACTGA+TGG | - | chr4.1:78602594-78602613 | None:intergenic | 30.0% |
| ! | TTTTGATCTGTCTCAAAGAA+TGG | + | chr4.1:78604512-78604531 | MS.gene73243:intron | 30.0% |
| !! | TTCAGATGTTATTGGTTTGT+TGG | + | chr4.1:78605719-78605738 | MS.gene73243:intron | 30.0% |
| !!! | ACAAGTTTGTTTTGCCTATT+GGG | + | chr4.1:78603413-78603432 | MS.gene73243:intron | 30.0% |
| !!! | CCTTTTGAAGTTAACCATTT+CGG | + | chr4.1:78604366-78604385 | MS.gene73243:intron | 30.0% |
| !!! | CCTTTTGAAGTTAACCATTT+CGG | - | chr4.1:78604385-78604366 | None:intergenic | 30.0% |
| AAAAAAAGGAGGATGAGGTT+GGG | - | chr4.1:78603653-78603672 | None:intergenic | 35.0% | |
| AAGAAGGATAGATCCAAATC+AGG | + | chr4.1:78605109-78605128 | MS.gene73243:intron | 35.0% | |
| AAGAGATGAGATAGGATATG+AGG | + | chr4.1:78604442-78604461 | MS.gene73243:intron | 35.0% | |
| AAGGCAACCAGAAAAGAAAT+AGG | + | chr4.1:78604037-78604056 | MS.gene73243:intron | 35.0% | |
| AATTTGCAATTCGTATGGCA+TGG | + | chr4.1:78605801-78605820 | MS.gene73243:CDS | 35.0% | |
| AGAAGAAAGAAACACAGAGA+GGG | + | chr4.1:78605287-78605306 | MS.gene73243:intron | 35.0% | |
| ATAGGGAGAAGAGTTTATCA+TGG | + | chr4.1:78605228-78605247 | MS.gene73243:intron | 35.0% | |
| ATAGGGAGAAGAGTTTATCA+TGG | - | chr4.1:78605247-78605228 | None:intergenic | 35.0% | |
| ATCCTCAACCATATTGTCAA+CGG | - | chr4.1:78605622-78605641 | None:intergenic | 35.0% | |
| ATGAATATGGGAATGTTGCT+AGG | + | chr4.1:78602607-78602626 | MS.gene73243:CDS | 35.0% | |
| CCACGTAAAAATGTTGTAGA+AGG | + | chr4.1:78604876-78604895 | MS.gene73243:intron | 35.0% | |
| CCCTAGTCATTAAAATTCAG+CGG | + | chr4.1:78603847-78603866 | MS.gene73243:intron | 35.0% | |
| CCGAAATGGTTAACTTCAAA+AGG | + | chr4.1:78603966-78603985 | MS.gene73243:intron | 35.0% | |
| CCGAAATGGTTAACTTCAAA+AGG | - | chr4.1:78603985-78603966 | None:intergenic | 35.0% | |
| CTATCGGAAAACAACCATTA+TGG | - | chr4.1:78605148-78605167 | None:intergenic | 35.0% | |
| GAAGAGTTTATCATGGTTGT+TGG | + | chr4.1:78605235-78605254 | MS.gene73243:intron | 35.0% | |
| GAGAAGAAAGAAACACAAAG+AGG | - | chr4.1:78603560-78603579 | None:intergenic | 35.0% | |
| GAGAGATTTGTGTGTGAATA+GGG | + | chr4.1:78605211-78605230 | MS.gene73243:intron | 35.0% | |
| GAGAGATTTGTGTGTGAATA+GGG | - | chr4.1:78605230-78605211 | None:intergenic | 35.0% | |
| GGTTAACTTCAAAAGGAGTT+TGG | + | chr4.1:78603973-78603992 | MS.gene73243:intron | 35.0% | |
| GGTTAACTTCAAAAGGAGTT+TGG | - | chr4.1:78603992-78603973 | None:intergenic | 35.0% | |
| TAAAAAAAGGAGGATGAGGT+TGG | - | chr4.1:78603654-78603673 | None:intergenic | 35.0% | |
| TATAACCTTAAGGCTGAATC+TGG | + | chr4.1:78602389-78602408 | MS.gene73243:CDS | 35.0% | |
| TCTGGTTGGACATCAATTTA+TGG | + | chr4.1:78603074-78603093 | MS.gene73243:intron | 35.0% | |
| TGAGAGATTTGTGTGTGAAT+AGG | + | chr4.1:78605210-78605229 | MS.gene73243:intron | 35.0% | |
| TGAGAGATTTGTGTGTGAAT+AGG | - | chr4.1:78605229-78605210 | None:intergenic | 35.0% | |
| TGCAGAATTTGCAATTCGTA+TGG | + | chr4.1:78605796-78605815 | MS.gene73243:CDS | 35.0% | |
| TGGAAAATCATCTGTACTGT+TGG | + | chr4.1:78603126-78603145 | MS.gene73243:CDS | 35.0% | |
| TTTGATCTGTCTCAGAGAAT+GGG | - | chr4.1:78603823-78603842 | None:intergenic | 35.0% | |
| ! | AGATGATTTTCCACCTAGAA+TGG | - | chr4.1:78603119-78603138 | None:intergenic | 35.0% |
| ! | CCTTCTACAACATTTTTACG+TGG | - | chr4.1:78604879-78604898 | None:intergenic | 35.0% |
| ! | CTGGTGCACAAATAAGATTT+TGG | + | chr4.1:78603380-78603399 | MS.gene73243:intron | 35.0% |
| ! | TCTTGTTTCCGTTGACAATA+TGG | + | chr4.1:78605611-78605630 | MS.gene73243:CDS | 35.0% |
| ! | TTTTGATCTGTCTCAGAGAA+TGG | - | chr4.1:78603824-78603843 | None:intergenic | 35.0% |
| !! | ACCGCTGAATTTTAATGACT+AGG | - | chr4.1:78603851-78603870 | None:intergenic | 35.0% |
| !! | ACTAGATCCGAGTTTTTCAA+TGG | - | chr4.1:78605019-78605038 | None:intergenic | 35.0% |
| !! | AGCAGATCCTATTTCTTTTC+TGG | + | chr4.1:78604288-78604307 | MS.gene73243:intron | 35.0% |
| !! | AGCAGATCCTATTTCTTTTC+TGG | - | chr4.1:78604307-78604288 | None:intergenic | 35.0% |
| !! | CATAATGGTTGTTTTCCGAT+AGG | + | chr4.1:78605146-78605165 | MS.gene73243:intron | 35.0% |
| !! | CCGCTGAATTTTAATGACTA+GGG | - | chr4.1:78603850-78603869 | None:intergenic | 35.0% |
| !! | GATGACGATGTTGATTTGTT+TGG | + | chr4.1:78602934-78602953 | MS.gene73243:CDS | 35.0% |
| !! | GTTGTTTGATTTGTGACATG+AGG | + | chr4.1:78605176-78605195 | MS.gene73243:intron | 35.0% |
| !! | TAATGTCATCCTTTGAAGCT+TGG | - | chr4.1:78602554-78602573 | None:intergenic | 35.0% |
| !! | TTGATTTGTGACATGAGGTT+GGG | + | chr4.1:78605181-78605200 | MS.gene73243:intron | 35.0% |
| !! | TTTGATTTGTGACATGAGGT+TGG | + | chr4.1:78605180-78605199 | MS.gene73243:intron | 35.0% |
| !!! | ACCGCTGATTTTAAATGACT+AGG | + | chr4.1:78604484-78604503 | MS.gene73243:intron | 35.0% |
| !!! | CACAAGTTTGTTTTGCCTAT+TGG | + | chr4.1:78603412-78603431 | MS.gene73243:intron | 35.0% |
| !!! | GGTTTTGATTGGATCAGTTA+TGG | - | chr4.1:78603920-78603939 | None:intergenic | 35.0% |
| !!! | TTCTTTTCTGGTTGCCTTAT+AGG | - | chr4.1:78604035-78604054 | None:intergenic | 35.0% |
| !!! | TTTTCTGCTGATTCCATTCT+AGG | + | chr4.1:78603103-78603122 | MS.gene73243:intron | 35.0% |
| AAGAGATGAGAGAGAGGATT+AGG | + | chr4.1:78604393-78604412 | MS.gene73243:intron | 40.0% | |
| AAGAGATGAGAGAGAGGATT+AGG | - | chr4.1:78604412-78604393 | None:intergenic | 40.0% | |
| AAGGCAGCCAGAAAAGAAAT+AGG | - | chr4.1:78604298-78604317 | None:intergenic | 40.0% | |
| AATATGGGAATGTTGCTAGG+TGG | + | chr4.1:78602610-78602629 | MS.gene73243:CDS | 40.0% | |
| AGAAAGAAACACAAAGAGGG+AGG | - | chr4.1:78603556-78603575 | None:intergenic | 40.0% | |
| AGAGACACACTTTCCTGATT+TGG | - | chr4.1:78605125-78605144 | None:intergenic | 40.0% | |
| AGAGATGAGAGAGAGGATTA+GGG | + | chr4.1:78604394-78604413 | MS.gene73243:intron | 40.0% | |
| AGAGATGAGAGAGAGGATTA+GGG | - | chr4.1:78604413-78604394 | None:intergenic | 40.0% | |
| ATGGACGAAAGAGATGAGAT+AGG | + | chr4.1:78604434-78604453 | MS.gene73243:intron | 40.0% | |
| CAAACAACACCACAACCTAT+CGG | - | chr4.1:78605164-78605183 | None:intergenic | 40.0% | |
| CATTGATGCACAAGGATTTG+GGG | + | chr4.1:78604120-78604139 | MS.gene73243:intron | 40.0% | |
| CATTGATGCACAAGGATTTG+GGG | - | chr4.1:78604139-78604120 | None:intergenic | 40.0% | |
| GAAAGAAACACAAAGAGGGA+GGG | - | chr4.1:78603555-78603574 | None:intergenic | 40.0% | |
| GAAGAGTTTATCATGGTTGC+TGG | - | chr4.1:78603599-78603618 | None:intergenic | 40.0% | |
| GAGAAGAAAGAAACACAGAG+AGG | + | chr4.1:78605286-78605305 | MS.gene73243:intron | 40.0% | |
| GAGTTTATCATGGTTGTTGG+AGG | + | chr4.1:78605238-78605257 | MS.gene73243:intron | 40.0% | |
| GGTTTCGATTGGATCAGTTA+TGG | + | chr4.1:78604415-78604434 | MS.gene73243:intron | 40.0% | |
| GTTTAGGTACCAAGCTTCAA+AGG | + | chr4.1:78602542-78602561 | MS.gene73243:intron | 40.0% | |
| TAATAGCAAGTACATGGGCT+GGG | + | chr4.1:78603765-78603784 | MS.gene73243:intron | 40.0% | |
| TCTCTGCAATACGAAGACTA+AGG | - | chr4.1:78605432-78605451 | None:intergenic | 40.0% | |
| TCTTTATACCGTACCCAACA+GGG | - | chr4.1:78605560-78605579 | None:intergenic | 40.0% | |
| TGAGATCTGTTCAGTTGGAA+GGG | + | chr4.1:78603200-78603219 | MS.gene73243:CDS | 40.0% | |
| TGGATCCAGTGAGATATGAT+GGG | - | chr4.1:78603451-78603470 | None:intergenic | 40.0% | |
| TTCCGTTGACAATATGGTTG+AGG | + | chr4.1:78605617-78605636 | MS.gene73243:CDS | 40.0% | |
| TTCTTCGAGCTTCTTCATGT+CGG | - | chr4.1:78603176-78603195 | None:intergenic | 40.0% | |
| TTCTTTATACCGTACCCAAC+AGG | - | chr4.1:78605561-78605580 | None:intergenic | 40.0% | |
| TTGGATCCAGTGAGATATGA+TGG | - | chr4.1:78603452-78603471 | None:intergenic | 40.0% | |
| ! | AAGAGATGAGAGAGAGTATG+AGG | - | chr4.1:78603893-78603912 | None:intergenic | 40.0% |
| ! | GAAAGTGTGTCTCTCCATAA+TGG | + | chr4.1:78605131-78605150 | MS.gene73243:intron | 40.0% |
| ! | GCATTGATGCACAAGGATTT+GGG | + | chr4.1:78604119-78604138 | MS.gene73243:intron | 40.0% |
| ! | GCATTGATGCACAAGGATTT+GGG | - | chr4.1:78604138-78604119 | None:intergenic | 40.0% |
| ! | TTTGTTTGGTGAAGAGACTG+AGG | + | chr4.1:78602948-78602967 | MS.gene73243:CDS | 40.0% |
| !! | GAGAGGATTAGGGTTTTGAT+TGG | - | chr4.1:78603931-78603950 | None:intergenic | 40.0% |
| !!! | GTTGTTGGAGGTTTTGTTGT+TGG | + | chr4.1:78605250-78605269 | MS.gene73243:intron | 40.0% |
| !!! | TTCTTTTCTGGCTGCCTTAT+AGG | + | chr4.1:78604300-78604319 | MS.gene73243:intron | 40.0% |
| AAACTTGTCCCTGTTGGGTA+CGG | + | chr4.1:78605549-78605568 | MS.gene73243:CDS | 45.0% | |
| ACAGATCCGTGCCAACTAAA+TGG | + | chr4.1:78604908-78604927 | MS.gene73243:intron | 45.0% | |
| ACTCTGGACATACTCGTTGA+TGG | - | chr4.1:78605661-78605680 | None:intergenic | 45.0% | |
| ACTGTTGGATGTGAAGCCAT+GGG | + | chr4.1:78603141-78603160 | MS.gene73243:CDS | 45.0% | |
| AGAAAGAAACACAGAGAGGG+AGG | + | chr4.1:78605290-78605309 | MS.gene73243:intron | 45.0% | |
| AGAGACTGAGGAAGAGAAGA+AGG | + | chr4.1:78602960-78602979 | MS.gene73243:CDS | 45.0% | |
| AGATGCAGTTGGGTATGCAA+CGG | + | chr4.1:78604155-78604174 | MS.gene73243:intron | 45.0% | |
| AGCAGTGAGATCTGTTCAGT+TGG | + | chr4.1:78603195-78603214 | MS.gene73243:CDS | 45.0% | |
| AGCCACAAGAGAAGATTCCA+CGG | - | chr4.1:78602857-78602876 | None:intergenic | 45.0% | |
| ATCTGTCTCAAAGAATGGGC+CGG | + | chr4.1:78604517-78604536 | MS.gene73243:intron | 45.0% | |
| CTCATCTCTTTCGTCCGAAA+TGG | + | chr4.1:78603952-78603971 | MS.gene73243:intron | 45.0% | |
| CTCATCTCTTTCGTCCGAAA+TGG | - | chr4.1:78603971-78603952 | None:intergenic | 45.0% | |
| CTCTGGACATACTCGTTGAT+GGG | - | chr4.1:78605660-78605679 | None:intergenic | 45.0% | |
| GAAAGAAACACAGAGAGGGA+GGG | + | chr4.1:78605291-78605310 | MS.gene73243:intron | 45.0% | |
| GAGAGGATTAGGGTTTCGAT+TGG | + | chr4.1:78604404-78604423 | MS.gene73243:intron | 45.0% | |
| GAGTTTATCATGGTTGCTGG+AGG | - | chr4.1:78603596-78603615 | None:intergenic | 45.0% | |
| GGATCCAGTGAGATATGATG+GGG | - | chr4.1:78603450-78603469 | None:intergenic | 45.0% | |
| GGCATGGAGATCATTGTAGT+GGG | + | chr4.1:78605817-78605836 | MS.gene73243:CDS | 45.0% | |
| GGGCTTGAGATTAACCCAAT+AGG | - | chr4.1:78603430-78603449 | None:intergenic | 45.0% | |
| GTAATAGCAAGTACATGGGC+CGG | - | chr4.1:78603783-78603764 | None:intergenic | 45.0% | |
| GTAATAGCAAGTACATGGGC+TGG | + | chr4.1:78603764-78603783 | MS.gene73243:intron | 45.0% | |
| GTGAGATCTGTTCAGTTGGA+AGG | + | chr4.1:78603199-78603218 | MS.gene73243:CDS | 45.0% | |
| TAATAGCAAGTACATGGGCC+GGG | - | chr4.1:78604571-78604590 | None:intergenic | 45.0% | |
| TACTGTTGGATGTGAAGCCA+TGG | + | chr4.1:78603140-78603159 | MS.gene73243:CDS | 45.0% | |
| TCAAGCCAGATTCAGCCTTA+AGG | - | chr4.1:78602397-78602416 | None:intergenic | 45.0% | |
| TCACACGCAGTTACATCACT+GGG | + | chr4.1:78602438-78602457 | MS.gene73243:CDS | 45.0% | |
| TCAGTTGGAAGGGTTGTTCT+GGG | + | chr4.1:78603210-78603229 | MS.gene73243:CDS | 45.0% | |
| TCCTCCAGTTTCTGACACAA+AGG | + | chr4.1:78602894-78602913 | MS.gene73243:CDS | 45.0% | |
| TCTCACATCACGCTTAGCAT+TGG | + | chr4.1:78604252-78604271 | MS.gene73243:intron | 45.0% | |
| TGATGTAACTGCGTGTGAGA+AGG | - | chr4.1:78602436-78602455 | None:intergenic | 45.0% | |
| TGGCATGGAGATCATTGTAG+TGG | + | chr4.1:78605816-78605835 | MS.gene73243:CDS | 45.0% | |
| TGTCCAGAGTTGTGACATTG+TGG | + | chr4.1:78605671-78605690 | MS.gene73243:CDS | 45.0% | |
| TGTGTCTCTAGTGGTGTTTC+TGG | + | chr4.1:78602814-78602833 | MS.gene73243:intron | 45.0% | |
| TTCAGTTGGAAGGGTTGTTC+TGG | + | chr4.1:78603209-78603228 | MS.gene73243:CDS | 45.0% | |
| TTTGCAACACCAGATGCAGT+TGG | - | chr4.1:78604191-78604210 | None:intergenic | 45.0% | |
| ! | CTATTCTTCAAGGGCATGTC+TGG | + | chr4.1:78603361-78603380 | MS.gene73243:intron | 45.0% |
| !! | ATGTCGGTTTCATCATCCCA+TGG | - | chr4.1:78603160-78603179 | None:intergenic | 45.0% |
| !! | GGCATTGATGCACAAGGATT+TGG | + | chr4.1:78604118-78604137 | MS.gene73243:intron | 45.0% |
| !! | GGCATTGATGCACAAGGATT+TGG | - | chr4.1:78604137-78604118 | None:intergenic | 45.0% |
| !! | GGTTGTTTTCCGATAGGTTG+TGG | + | chr4.1:78605152-78605171 | MS.gene73243:intron | 45.0% |
| !! | TCTAGTGGTGTTTCTGGTGA+GGG | + | chr4.1:78602820-78602839 | MS.gene73243:intron | 45.0% |
| !! | TCTGCTGATTCCATTCTAGG+TGG | + | chr4.1:78603106-78603125 | MS.gene73243:intron | 45.0% |
| AACACCAGATGCAGTTGGCA+TGG | - | chr4.1:78604186-78604205 | None:intergenic | 50.0% | |
| ACAGCCAAACTTGTCCCTGT+TGG | + | chr4.1:78605543-78605562 | MS.gene73243:intron | 50.0% | |
| ACGCAGTTACATCACTGGGT+AGG | + | chr4.1:78602442-78602461 | MS.gene73243:intron | 50.0% | |
| AGAAGAAGGCAGCTGAGGAA+CGG | + | chr4.1:78602974-78602993 | MS.gene73243:CDS | 50.0% | |
| AGGCCACAATGTCACAACTC+TGG | - | chr4.1:78605677-78605696 | None:intergenic | 50.0% | |
| ATCTGTCTCAGAGAATGGGC+CGG | - | chr4.1:78603819-78603838 | None:intergenic | 50.0% | |
| CAAGCCCCATCATATCTCAC+TGG | + | chr4.1:78603443-78603462 | MS.gene73243:intron | 50.0% | |
| CACCGTGGAATCTTCTCTTG+TGG | + | chr4.1:78602852-78602871 | MS.gene73243:CDS | 50.0% | |
| CAGCCAAACTTGTCCCTGTT+GGG | + | chr4.1:78605544-78605563 | MS.gene73243:intron | 50.0% | |
| CAGTTGGAAGGGTTGTTCTG+GGG | + | chr4.1:78603211-78603230 | MS.gene73243:CDS | 50.0% | |
| CTCACACGCAGTTACATCAC+TGG | + | chr4.1:78602437-78602456 | MS.gene73243:CDS | 50.0% | |
| CTCCGGATTCTACTATGACC+CGG | + | chr4.1:78604550-78604569 | MS.gene73243:intron | 50.0% | |
| GCCTTTGTGTCAGAAACTGG+AGG | - | chr4.1:78602898-78602917 | None:intergenic | 50.0% | |
| GCGTGATGTGAGACATGCAA+AGG | - | chr4.1:78604245-78604264 | None:intergenic | 50.0% | |
| GCTGCCTTTGTGTCAGAAAC+TGG | - | chr4.1:78602901-78602920 | None:intergenic | 50.0% | |
| GGACGAAAGAGATGAGAGAG+AGG | + | chr4.1:78604387-78604406 | MS.gene73243:intron | 50.0% | |
| GGACGAAAGAGATGAGAGAG+AGG | - | chr4.1:78604406-78604387 | None:intergenic | 50.0% | |
| GGCTGGGTCATAGTAGAATC+CGG | + | chr4.1:78603781-78603800 | MS.gene73243:intron | 50.0% | |
| GTACCCAACAGGGACAAGTT+TGG | - | chr4.1:78605550-78605569 | None:intergenic | 50.0% | |
| GTGAGACATGCAAAGGATGC+TGG | + | chr4.1:78604097-78604116 | MS.gene73243:intron | 50.0% | |
| GTGAGACATGCAAAGGATGC+TGG | - | chr4.1:78604116-78604097 | None:intergenic | 50.0% | |
| GTTGCATACCCAACTGCATC+TGG | - | chr4.1:78604156-78604175 | None:intergenic | 50.0% | |
| TCTCACAGCACGCTTAGCAT+TGG | - | chr4.1:78604083-78604102 | None:intergenic | 50.0% | |
| TCTGTCTCAAAGAATGGGCC+GGG | + | chr4.1:78604518-78604537 | MS.gene73243:intron | 50.0% | |
| TGTGTCAGAAACTGGAGGAG+TGG | - | chr4.1:78602893-78602912 | None:intergenic | 50.0% | |
| TTCTGACACAAAGGCAGCTG+AGG | + | chr4.1:78602903-78602922 | MS.gene73243:CDS | 50.0% | |
| TTGCAGCACCAGATGCAGTT+GGG | + | chr4.1:78604145-78604164 | MS.gene73243:intron | 50.0% | |
| TTTGCAGCACCAGATGCAGT+TGG | + | chr4.1:78604144-78604163 | MS.gene73243:intron | 50.0% | |
| ! | AATCCGGAGTGTTCAAGACC+CGG | + | chr4.1:78603797-78603816 | MS.gene73243:intron | 50.0% |
| ! | AATCCGGAGTGTTCAAGACC+CGG | - | chr4.1:78603816-78603797 | None:intergenic | 50.0% |
| ! | CACAAGTGAGACGAGTGTTG+TGG | - | chr4.1:78605346-78605365 | None:intergenic | 50.0% |
| ! | CTTTTTGCCGGATGCCTTCA+CGG | - | chr4.1:78603007-78603026 | None:intergenic | 50.0% |
| ! | GGAGCTTGCTTCTGCCTATA+AGG | + | chr4.1:78604018-78604037 | MS.gene73243:intron | 50.0% |
| ! | GGAGCTTGCTTCTGCCTATA+AGG | - | chr4.1:78604037-78604018 | None:intergenic | 50.0% |
| !! | CTCTAGTGGTGTTTCTGGTG+AGG | + | chr4.1:78602819-78602838 | MS.gene73243:intron | 50.0% |
| !! | GATGCTGGCATTGATGCACA+AGG | + | chr4.1:78604112-78604131 | MS.gene73243:intron | 50.0% |
| !! | GATGCTGGCATTGATGCACA+AGG | - | chr4.1:78604131-78604112 | None:intergenic | 50.0% |
| CGTTCCATGCCAACTGCATC+TGG | + | chr4.1:78604179-78604198 | MS.gene73243:intron | 55.0% | |
| GAAGAAGGCAGCTGAGGAAC+GGG | + | chr4.1:78602975-78602994 | MS.gene73243:CDS | 55.0% | |
| GCGTGCTGTGAGACATGCAA+AGG | + | chr4.1:78604090-78604109 | MS.gene73243:intron | 55.0% | |
| GGAAGAGAAGAAGGCAGCTG+AGG | + | chr4.1:78602969-78602988 | MS.gene73243:CDS | 55.0% | |
| GGCCGGGTCATAGTAGAATC+CGG | - | chr4.1:78604555-78604574 | None:intergenic | 55.0% | |
| TCTGTCTCAGAGAATGGGCC+GGG | - | chr4.1:78603818-78603837 | None:intergenic | 55.0% | |
| !! | GGTGTTTCTGGTGAGGGATC+TGG | + | chr4.1:78602826-78602845 | MS.gene73243:CDS | 55.0% |
| ! | GTGAGACGAGTGTTGTGGCG+CGG | - | chr4.1:78605341-78605360 | None:intergenic | 60.0% |
| !! | TGAGGGATCTGGTGTCACCG+TGG | + | chr4.1:78602837-78602856 | MS.gene73243:CDS | 60.0% |
| GGGCCGGGTCTTGAACACTC+CGG | + | chr4.1:78604533-78604552 | MS.gene73243:intron | 65.0% | |
| GGGCCGGGTCTTGAACACTC+CGG | - | chr4.1:78604552-78604533 | None:intergenic | 65.0% | |
| !! | GCAGCAGCCGTGAAGGCATC+CGG | + | chr4.1:78602997-78603016 | MS.gene73243:CDS | 65.0% |
| GGAACGGGCAGCAGCCGTGA+AGG | + | chr4.1:78602990-78603009 | MS.gene73243:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 78602374 | 78605884 | 78602374 | ID=MS.gene73243 |
| chr4.1 | mRNA | 78602374 | 78605884 | 78602374 | ID=MS.gene73243.t1;Parent=MS.gene73243 |
| chr4.1 | exon | 78602374 | 78602459 | 78602374 | ID=MS.gene73243.t1.exon1;Parent=MS.gene73243.t1 |
| chr4.1 | CDS | 78602374 | 78602459 | 78602374 | ID=cds.MS.gene73243.t1;Parent=MS.gene73243.t1 |
| chr4.1 | exon | 78602548 | 78602664 | 78602548 | ID=MS.gene73243.t1.exon2;Parent=MS.gene73243.t1 |
| chr4.1 | CDS | 78602548 | 78602664 | 78602548 | ID=cds.MS.gene73243.t1;Parent=MS.gene73243.t1 |
| chr4.1 | exon | 78602825 | 78603033 | 78602825 | ID=MS.gene73243.t1.exon3;Parent=MS.gene73243.t1 |
| chr4.1 | CDS | 78602825 | 78603033 | 78602825 | ID=cds.MS.gene73243.t1;Parent=MS.gene73243.t1 |
| chr4.1 | exon | 78603125 | 78603238 | 78603125 | ID=MS.gene73243.t1.exon4;Parent=MS.gene73243.t1 |
| chr4.1 | CDS | 78603125 | 78603238 | 78603125 | ID=cds.MS.gene73243.t1;Parent=MS.gene73243.t1 |
| chr4.1 | exon | 78605547 | 78605708 | 78605547 | ID=MS.gene73243.t1.exon5;Parent=MS.gene73243.t1 |
| chr4.1 | CDS | 78605547 | 78605708 | 78605547 | ID=cds.MS.gene73243.t1;Parent=MS.gene73243.t1 |
| chr4.1 | exon | 78605763 | 78605884 | 78605763 | ID=MS.gene73243.t1.exon6;Parent=MS.gene73243.t1 |
| chr4.1 | CDS | 78605763 | 78605884 | 78605763 | ID=cds.MS.gene73243.t1;Parent=MS.gene73243.t1 |
| Gene Sequence |
| Protein sequence |
