Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74532.t1 | XP_003594541.1 | 93.2 | 659 | 44 | 1 | 1 | 659 | 1 | 658 | 1.30E-233 | 819.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74532.t1 | Q8N9T8 | 33.8 | 598 | 301 | 17 | 17 | 548 | 8 | 576 | 2.8e-19 | 98.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74532.t1 | G7IKW1 | 93.2 | 659 | 44 | 1 | 1 | 659 | 1 | 658 | 9.2e-234 | 819.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene74532 | 0.801949 | 7.07E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene74532 | 0.805964 | 1.04E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene74532 | 0.808966 | 2.39E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene74532 | 0.803986 | 2.68E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene74532 | 0.810823 | 9.52E-51 | -1.69E-46 |
| MS.gene050026 | MS.gene74532 | 0.828072 | 1.10E-54 | -1.69E-46 |
| MS.gene051700 | MS.gene74532 | 0.806681 | 7.31E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene74532 | 0.801231 | 9.92E-49 | -1.69E-46 |
| MS.gene052518 | MS.gene74532 | 0.803154 | 3.99E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene74532 | 0.810203 | 1.30E-50 | -1.69E-46 |
| MS.gene052561 | MS.gene74532 | 0.80417 | 2.46E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene74532 | 0.828196 | 1.03E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene74532 | 0.827585 | 1.44E-54 | -1.69E-46 |
| MS.gene052896 | MS.gene74532 | 0.815008 | 1.15E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene74532 | 0.800471 | 1.42E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene74532 | 0.80734 | 5.30E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene74532 | 0.804034 | 2.62E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene74532 | 0.81115 | 8.08E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene74532 | 0.813483 | 2.50E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene74532 | 0.823363 | 1.44E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene74532 | 0.834097 | 3.65E-56 | -1.69E-46 |
| MS.gene055580 | MS.gene74532 | -0.808001 | 3.84E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene74532 | 0.821619 | 3.67E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene74532 | -0.802438 | 5.61E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene74532 | 0.845494 | 3.92E-59 | -1.69E-46 |
| MS.gene05690 | MS.gene74532 | 0.812781 | 3.57E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene74532 | 0.833593 | 4.88E-56 | -1.69E-46 |
| MS.gene057444 | MS.gene74532 | 0.800064 | 1.72E-48 | -1.69E-46 |
| MS.gene057598 | MS.gene74532 | 0.815918 | 7.23E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene74532 | 0.831524 | 1.59E-55 | -1.69E-46 |
| MS.gene058037 | MS.gene74532 | 0.802679 | 5.00E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene74532 | 0.800015 | 1.76E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene74532 | 0.807148 | 5.82E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene74532 | 0.806875 | 6.65E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene74532 | 0.819071 | 1.41E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene74532 | 0.807146 | 5.83E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene74532 | 0.834171 | 3.50E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene74532 | 0.824427 | 8.12E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene74532 | 0.804816 | 1.80E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene74532 | 0.831899 | 1.29E-55 | -1.69E-46 |
| MS.gene060521 | MS.gene74532 | 0.805398 | 1.36E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene74532 | 0.831801 | 1.36E-55 | -1.69E-46 |
| MS.gene060634 | MS.gene74532 | -0.817772 | 2.77E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene74532 | 0.827 | 1.99E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene74532 | 0.824506 | 7.78E-54 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74532.t1 | MTR_2g030390 | 96.510 | 659 | 22 | 1 | 1 | 659 | 1 | 658 | 0.0 | 1255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74532.t1 | AT3G24080 | 45.078 | 579 | 269 | 13 | 5 | 555 | 8 | 565 | 3.64e-108 | 340 |
| MS.gene74532.t1 | AT3G24080 | 45.078 | 579 | 269 | 13 | 5 | 555 | 8 | 565 | 3.85e-108 | 340 |
| MS.gene74532.t1 | AT3G24080 | 45.078 | 579 | 269 | 13 | 5 | 555 | 8 | 565 | 4.06e-108 | 340 |
| MS.gene74532.t1 | AT3G24080 | 45.078 | 579 | 269 | 13 | 5 | 555 | 8 | 565 | 5.03e-108 | 340 |
Find 118 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCTGTCTTCTCCTTTA+AGG | 0.067645 | 2.3:+59448451 | None:intergenic |
| ATTGAGGAGGGACCAGATTT+TGG | 0.223663 | 2.3:-59448611 | MS.gene74532:CDS |
| ATCATTCTGTCATATTCCTT+TGG | 0.234372 | 2.3:+59447942 | None:intergenic |
| TAAGCTTCAATTCCTCTTCT+TGG | 0.247682 | 2.3:+59447427 | None:intergenic |
| ATTCTTTGATGCTTTGATTA+AGG | 0.251168 | 2.3:-59448780 | MS.gene74532:CDS |
| CCACATTCATCCCAATCTTT+AGG | 0.290694 | 2.3:+59447798 | None:intergenic |
| GATCCTTCGTGCAGCAAGTT+TGG | 0.295537 | 2.3:-59447364 | MS.gene74532:CDS |
| TCATTCTGTCATATTCCTTT+GGG | 0.297202 | 2.3:+59447943 | None:intergenic |
| AAAAGCAAACACAGCAAGTT+TGG | 0.300133 | 2.3:-59447250 | MS.gene74532:CDS |
| GAAGCGTAAAACTGCACTTT+TGG | 0.321590 | 2.3:-59447643 | MS.gene74532:CDS |
| TGAGGAATTTGAGGAGAAAC+TGG | 0.339212 | 2.3:-59448408 | MS.gene74532:CDS |
| TACTTGGGCTTCCTAAAGAT+TGG | 0.346122 | 2.3:-59447809 | MS.gene74532:CDS |
| CACTTTCATCTTCACTACTA+TGG | 0.346312 | 2.3:+59448702 | None:intergenic |
| TGAGATGGAAATTGAGAGGC+AGG | 0.355422 | 2.3:-59448255 | MS.gene74532:CDS |
| AAGCCAAGAGAAGGGAAAAC+AGG | 0.359507 | 2.3:-59447119 | MS.gene74532:CDS |
| ATCCTTCGTGCAGCAAGTTT+GGG | 0.366521 | 2.3:-59447363 | MS.gene74532:CDS |
| AAAACAAAACCTAACAGATT+TGG | 0.379299 | 2.3:-59447528 | MS.gene74532:CDS |
| GAGTGAAGATGAGGAATTTG+AGG | 0.381021 | 2.3:-59448417 | MS.gene74532:CDS |
| TGCTCGTAAGGTGGAGGGTT+CGG | 0.395725 | 2.3:-59448180 | MS.gene74532:CDS |
| GACTTGCTAGAATCAGCCTT+GGG | 0.399472 | 2.3:+59447207 | None:intergenic |
| TCCTCTTTATCACCAAAATC+TGG | 0.405490 | 2.3:+59448599 | None:intergenic |
| GTATCCAGGCCAAATCTGTT+AGG | 0.416690 | 2.3:+59447519 | None:intergenic |
| TAGATTATGAGGACACAGTT+GGG | 0.421516 | 2.3:-59447581 | MS.gene74532:CDS |
| ACTTGGGCTTCCTAAAGATT+GGG | 0.423740 | 2.3:-59447808 | MS.gene74532:CDS |
| TCATCGATCAATAGTATCTC+TGG | 0.430675 | 2.3:+59447495 | None:intergenic |
| GAGTCGAGACTTAAAGCATA+TGG | 0.437812 | 2.3:-59447078 | MS.gene74532:CDS |
| AGCAGCAGAAAAGGATGGCT+TGG | 0.438918 | 2.3:-59448492 | MS.gene74532:CDS |
| CTTCCGACTACCACCTTCCT+CGG | 0.447383 | 2.3:+59447668 | None:intergenic |
| TTCAATTCCTCTTCTTGGTA+AGG | 0.450588 | 2.3:+59447432 | None:intergenic |
| GATACTATTGATCGATGATA+AGG | 0.458126 | 2.3:-59447490 | MS.gene74532:CDS |
| GAGAGAGGCAATACGACAAA+AGG | 0.459308 | 2.3:-59448108 | MS.gene74532:CDS |
| AGATCCTGTTCTTAAGCAAA+AGG | 0.465168 | 2.3:-59448747 | MS.gene74532:CDS |
| GTCTACTGCAGAATTAGAAA+AGG | 0.471726 | 2.3:-59447973 | MS.gene74532:CDS |
| CTAATTCTGCAGTAGACAAA+GGG | 0.472024 | 2.3:+59447979 | None:intergenic |
| TGAGCAAGAGGAGTTGAAAC+AGG | 0.482808 | 2.3:-59448525 | MS.gene74532:CDS |
| AATGAGAAAGGTATATCAAA+TGG | 0.485679 | 2.3:-59448569 | MS.gene74532:CDS |
| AAATCCAGGGGATAGAGTGC+TGG | 0.488077 | 2.3:-59448207 | MS.gene74532:CDS |
| TACTAGTGATGATGATCTCA+TGG | 0.493040 | 2.3:-59447718 | MS.gene74532:CDS |
| TTTCAACTCTAAGAGTGATA+AGG | 0.498953 | 2.3:-59448804 | MS.gene74532:CDS |
| GATGAATGTGGATCTGATGG+TGG | 0.500163 | 2.3:-59447786 | MS.gene74532:CDS |
| GGGTCATGCTCGTAAGGTGG+AGG | 0.503285 | 2.3:-59448186 | MS.gene74532:CDS |
| TGATGAGAAGAGTAAAGATA+AGG | 0.513195 | 2.3:-59448678 | MS.gene74532:CDS |
| GCAGCAGAAAAGGATGGCTT+GGG | 0.515479 | 2.3:-59448491 | MS.gene74532:CDS |
| AGGAAGGTGGTAGTCGGAAG+AGG | 0.516130 | 2.3:-59447665 | MS.gene74532:CDS |
| AGAGATTTCAGAAGATGAGA+TGG | 0.521290 | 2.3:-59448270 | MS.gene74532:CDS |
| AAAACCTAACAGATTTGGCC+TGG | 0.522228 | 2.3:-59447523 | MS.gene74532:CDS |
| GAGGATGAAACAAATGAGAA+AGG | 0.523006 | 2.3:-59448581 | MS.gene74532:CDS |
| CTGAAAGCAGCAGAAAAGGA+TGG | 0.523891 | 2.3:-59448497 | MS.gene74532:CDS |
| CTCACCTTAAAGGAGAAGAC+AGG | 0.529520 | 2.3:-59448455 | MS.gene74532:CDS |
| TTCCGACTACCACCTTCCTC+GGG | 0.529859 | 2.3:+59447669 | None:intergenic |
| CAAGGTAGAGAGTGAAGATG+AGG | 0.530933 | 2.3:-59448426 | MS.gene74532:CDS |
| AAAGAGCAAAGAGGAGAGAG+AGG | 0.532174 | 2.3:-59448123 | MS.gene74532:CDS |
| ATGAATGTGGATCTGATGGT+GGG | 0.532471 | 2.3:-59447785 | MS.gene74532:CDS |
| GAAAGCAAGACAAATGATGA+TGG | 0.538249 | 2.3:-59447619 | MS.gene74532:CDS |
| ACACAGAAGAATCAAAATCA+AGG | 0.538980 | 2.3:-59447143 | MS.gene74532:CDS |
| GAGTTATGCTGATGAGCAAG+AGG | 0.539407 | 2.3:-59448537 | MS.gene74532:CDS |
| AGTGCTGGGTCATGCTCGTA+AGG | 0.540823 | 2.3:-59448192 | MS.gene74532:CDS |
| AGATTATGAGGACACAGTTG+GGG | 0.541091 | 2.3:-59447580 | MS.gene74532:CDS |
| TAGTGAGGGTGAAGAAGACA+TGG | 0.541771 | 2.3:-59447862 | MS.gene74532:CDS |
| TCTAATTCTGCAGTAGACAA+AGG | 0.542118 | 2.3:+59447978 | None:intergenic |
| TTAGATTATGAGGACACAGT+TGG | 0.543563 | 2.3:-59447582 | MS.gene74532:CDS |
| GTTAACTTCAAACAATGTTG+TGG | 0.543762 | 2.3:-59447280 | MS.gene74532:CDS |
| TGACCCAGCACTCTATCCCC+TGG | 0.546475 | 2.3:+59448203 | None:intergenic |
| ATAGTATCTCTGGAGTATCC+AGG | 0.549189 | 2.3:+59447505 | None:intergenic |
| TGACTTGCTAGAATCAGCCT+TGG | 0.550613 | 2.3:+59447206 | None:intergenic |
| AAAGATACATGCTGAAGATG+AGG | 0.550832 | 2.3:-59447395 | MS.gene74532:CDS |
| GGCAAAGCATTTGATTGAGG+AGG | 0.551984 | 2.3:-59448624 | MS.gene74532:CDS |
| CTCATCAAACAGTTGTGTTG+TGG | 0.554487 | 2.3:-59447181 | MS.gene74532:CDS |
| ACTTGCTCCTTACCAAGAAG+AGG | 0.555311 | 2.3:-59447439 | MS.gene74532:CDS |
| ACTATTTCAAGAACAAAATG+TGG | 0.558440 | 2.3:-59448340 | MS.gene74532:CDS |
| AGAAAAGGAGTTTGACCCAA+AGG | 0.559539 | 2.3:-59447958 | MS.gene74532:CDS |
| AATCAAGGAAAGCCAAGAGA+AGG | 0.564095 | 2.3:-59447128 | MS.gene74532:CDS |
| TATTGGTTCACCTTCACACT+CGG | 0.566868 | 2.3:-59448876 | MS.gene74532:CDS |
| AATCCAGGGGATAGAGTGCT+GGG | 0.568166 | 2.3:-59448206 | MS.gene74532:CDS |
| AAAGGATGGCTTGGGAGATG+AGG | 0.568697 | 2.3:-59448483 | MS.gene74532:CDS |
| ATCAAGGAAAGCCAAGAGAA+GGG | 0.568922 | 2.3:-59447127 | MS.gene74532:CDS |
| TGGGATGAATGTGGATCTGA+TGG | 0.570198 | 2.3:-59447789 | MS.gene74532:CDS |
| GGCAATACGACAAAAGGAAA+GGG | 0.576585 | 2.3:-59448102 | MS.gene74532:CDS |
| GCAAAGCATTTGATTGAGGA+GGG | 0.577160 | 2.3:-59448623 | MS.gene74532:CDS |
| AGGCAATACGACAAAAGGAA+AGG | 0.579482 | 2.3:-59448103 | MS.gene74532:CDS |
| CATGCTGAAGATGAGGGCTA+AGG | 0.580350 | 2.3:-59447388 | MS.gene74532:CDS |
| AAGATACATGCTGAAGATGA+GGG | 0.584857 | 2.3:-59447394 | MS.gene74532:CDS |
| ACGACAAAAGGAAAGGGATG+AGG | 0.586281 | 2.3:-59448096 | MS.gene74532:CDS |
| TTATGAGGACACAGTTGGGG+GGG | 0.587460 | 2.3:-59447577 | MS.gene74532:CDS |
| CCTAAAGATTGGGATGAATG+TGG | 0.587753 | 2.3:-59447798 | MS.gene74532:CDS |
| GTTTGAGCATAACAAGAGGC+GGG | 0.590327 | 2.3:-59448939 | MS.gene74532:CDS |
| TATGCTTTAAGTCTCGACTC+TGG | 0.591074 | 2.3:+59447081 | None:intergenic |
| AAAAGATAAAGAAGATTGCA+GGG | 0.591451 | 2.3:-59448022 | MS.gene74532:CDS |
| GCTGGGTCATGCTCGTAAGG+TGG | 0.591483 | 2.3:-59448189 | MS.gene74532:CDS |
| AACTTCAAACAATGTTGTGG+AGG | 0.597494 | 2.3:-59447277 | MS.gene74532:CDS |
| GAGAAAGGTATATCAAATGG+TGG | 0.598159 | 2.3:-59448566 | MS.gene74532:CDS |
| GGAGAAGACAGGTGAAGACA+AGG | 0.599497 | 2.3:-59448444 | MS.gene74532:CDS |
| AGCCAAGAGAAGGGAAAACA+GGG | 0.602506 | 2.3:-59447118 | MS.gene74532:CDS |
| AAAGAGGACATTCCCGAGGA+AGG | 0.603495 | 2.3:-59447681 | MS.gene74532:CDS |
| GGTCATGCTCGTAAGGTGGA+GGG | 0.605836 | 2.3:-59448185 | MS.gene74532:CDS |
| GGTGGCAAAGCATTTGATTG+AGG | 0.605973 | 2.3:-59448627 | MS.gene74532:CDS |
| TTCCCGAGGAAGGTGGTAGT+CGG | 0.606171 | 2.3:-59447671 | MS.gene74532:CDS |
| CACAACACAACTGTTTGATG+AGG | 0.608834 | 2.3:+59447182 | None:intergenic |
| GATTATGAGGACACAGTTGG+GGG | 0.611884 | 2.3:-59447579 | MS.gene74532:CDS |
| GATGCAAGAGATACAAGAGA+AGG | 0.616907 | 2.3:-59448048 | MS.gene74532:CDS |
| AGTGATGATGATCTCATGGA+AGG | 0.617533 | 2.3:-59447714 | MS.gene74532:CDS |
| TCATCATCTTCCGAGTGTGA+AGG | 0.624572 | 2.3:+59448866 | None:intergenic |
| GGTTTGAGCATAACAAGAGG+CGG | 0.627786 | 2.3:-59448940 | MS.gene74532:CDS |
| AAGATGAGATGGAAATTGAG+AGG | 0.629773 | 2.3:-59448259 | MS.gene74532:CDS |
| GAAGAGAAATAAGAAGCCCA+AGG | 0.630672 | 2.3:-59447223 | MS.gene74532:CDS |
| ATTATGAGGACACAGTTGGG+GGG | 0.631668 | 2.3:-59447578 | MS.gene74532:CDS |
| GAGGACATTCCCGAGGAAGG+TGG | 0.633486 | 2.3:-59447678 | MS.gene74532:CDS |
| TGCGAAGTATTATAACGAAG+AGG | 0.635980 | 2.3:-59447904 | MS.gene74532:CDS |
| CTCAAATATCAAGATAGACG+AGG | 0.643202 | 2.3:-59448975 | MS.gene74532:CDS |
| TACCCAAACTTGCTGCACGA+AGG | 0.643872 | 2.3:+59447361 | None:intergenic |
| ATCAAACAGTTGTGTTGTGG+AGG | 0.648436 | 2.3:-59447178 | MS.gene74532:CDS |
| AGAGCAGAGAAAGAGCAAAG+AGG | 0.649070 | 2.3:-59448132 | MS.gene74532:CDS |
| TAGACGAGGAATATGCTCGT+AGG | 0.664106 | 2.3:-59448961 | MS.gene74532:CDS |
| CTATTTCAAGAACAAAATGT+GGG | 0.673159 | 2.3:-59448339 | MS.gene74532:CDS |
| TGAGCATAACAAGAGGCGGG+AGG | 0.702904 | 2.3:-59448936 | MS.gene74532:CDS |
| GTAGGTTTGAGCATAACAAG+AGG | 0.707686 | 2.3:-59448943 | MS.gene74532:CDS |
| GTAAGGTGGAGGGTTCGGTG+AGG | 0.731572 | 2.3:-59448175 | MS.gene74532:CDS |
| AATGTGGGTAGACAAGAATG+CGG | 0.745968 | 2.3:-59448324 | MS.gene74532:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTATAAATTAGATTATG+AGG | - | chr2.3:59448495-59448514 | MS.gene74532:CDS | 15.0% |
| !! | ATGAAGAATTGAAAAAGAAA+GGG | - | chr2.3:59447186-59447205 | MS.gene74532:CDS | 20.0% |
| !! | TATGAAGAATTGAAAAAGAA+AGG | - | chr2.3:59447185-59447204 | MS.gene74532:CDS | 20.0% |
| ! | AAAAAGAGGATGATTTACTT+GGG | - | chr2.3:59448263-59448282 | MS.gene74532:CDS | 25.0% |
| ! | AAAAAGATAAAGAAGATTGC+AGG | - | chr2.3:59448064-59448083 | MS.gene74532:CDS | 25.0% |
| ! | AAAACAAAACCTAACAGATT+TGG | - | chr2.3:59448559-59448578 | MS.gene74532:CDS | 25.0% |
| ! | AAAAGATAAAGAAGATTGCA+GGG | - | chr2.3:59448065-59448084 | MS.gene74532:CDS | 25.0% |
| ! | ACTATTTCAAGAACAAAATG+TGG | - | chr2.3:59447747-59447766 | MS.gene74532:CDS | 25.0% |
| ! | ATTCTTTGATGCTTTGATTA+AGG | - | chr2.3:59447307-59447326 | MS.gene74532:CDS | 25.0% |
| ! | CTATTTCAAGAACAAAATGT+GGG | - | chr2.3:59447748-59447767 | MS.gene74532:CDS | 25.0% |
| ! | TAAGAAGAAAAAGAGGTTAA+AGG | - | chr2.3:59448747-59448766 | MS.gene74532:CDS | 25.0% |
| ! | TGAAGAATTGAAAAAGAAAG+GGG | - | chr2.3:59447187-59447206 | MS.gene74532:CDS | 25.0% |
| !! | AATGAGAAAGGTATATCAAA+TGG | - | chr2.3:59447518-59447537 | MS.gene74532:CDS | 25.0% |
| !! | TTTTCAATTCTTCATAACGT+TGG | + | chr2.3:59447181-59447200 | None:intergenic | 25.0% |
| !!! | AAATCTGTTAGGTTTTGTTT+TGG | + | chr2.3:59448560-59448579 | None:intergenic | 25.0% |
| !!! | GAAAAAGTCAATGTTTTTGA+AGG | - | chr2.3:59447433-59447452 | MS.gene74532:CDS | 25.0% |
| ACACAGAAGAATCAAAATCA+AGG | - | chr2.3:59448944-59448963 | MS.gene74532:CDS | 30.0% | |
| ATCATTCTGTCATATTCCTT+TGG | + | chr2.3:59448148-59448167 | None:intergenic | 30.0% | |
| GAAAAAGAGGATGATTTACT+TGG | - | chr2.3:59448262-59448281 | MS.gene74532:CDS | 30.0% | |
| GATACTATTGATCGATGATA+AGG | - | chr2.3:59448597-59448616 | MS.gene74532:CDS | 30.0% | |
| GTTAACTTCAAACAATGTTG+TGG | - | chr2.3:59448807-59448826 | MS.gene74532:CDS | 30.0% | |
| TCATTCTGTCATATTCCTTT+GGG | + | chr2.3:59448147-59448166 | None:intergenic | 30.0% | |
| TGATGAGAAGAGTAAAGATA+AGG | - | chr2.3:59447409-59447428 | MS.gene74532:CDS | 30.0% | |
| TTGAAAAAGAAAGGGGTTAT+TGG | - | chr2.3:59447194-59447213 | MS.gene74532:CDS | 30.0% | |
| ! | AATGCGGAGATTTTAAATGT+TGG | - | chr2.3:59447779-59447798 | MS.gene74532:CDS | 30.0% |
| ! | ATGACTCAGAACATTTTTGA+TGG | - | chr2.3:59447065-59447084 | MS.gene74532:CDS | 30.0% |
| ! | TTTCAACTCTAAGAGTGATA+AGG | - | chr2.3:59447283-59447302 | MS.gene74532:CDS | 30.0% |
| !! | TTAGTTTTCAGGAAAATCCA+GGG | - | chr2.3:59447867-59447886 | MS.gene74532:CDS | 30.0% |
| !!! | AGAGTATGAAGTTAGTTTTC+AGG | - | chr2.3:59447856-59447875 | MS.gene74532:CDS | 30.0% |
| !!! | TCATCCTCTTTTTCAAAATC+TGG | + | chr2.3:59448256-59448275 | None:intergenic | 30.0% |
| AAAAGCAAACACAGCAAGTT+TGG | - | chr2.3:59448837-59448856 | MS.gene74532:CDS | 35.0% | |
| AAAGATACATGCTGAAGATG+AGG | - | chr2.3:59448692-59448711 | MS.gene74532:CDS | 35.0% | |
| AACTTCAAACAATGTTGTGG+AGG | - | chr2.3:59448810-59448829 | MS.gene74532:CDS | 35.0% | |
| AAGATACATGCTGAAGATGA+GGG | - | chr2.3:59448693-59448712 | MS.gene74532:CDS | 35.0% | |
| AAGATGAGATGGAAATTGAG+AGG | - | chr2.3:59447828-59447847 | MS.gene74532:CDS | 35.0% | |
| AGAGATTTCAGAAGATGAGA+TGG | - | chr2.3:59447817-59447836 | MS.gene74532:CDS | 35.0% | |
| AGATCCTGTTCTTAAGCAAA+AGG | - | chr2.3:59447340-59447359 | MS.gene74532:CDS | 35.0% | |
| CACTTTCATCTTCACTACTA+TGG | + | chr2.3:59447388-59447407 | None:intergenic | 35.0% | |
| CTAATTCTGCAGTAGACAAA+GGG | + | chr2.3:59448111-59448130 | None:intergenic | 35.0% | |
| CTCAAATATCAAGATAGACG+AGG | - | chr2.3:59447112-59447131 | MS.gene74532:CDS | 35.0% | |
| GAAAGCAAGACAAATGATGA+TGG | - | chr2.3:59448468-59448487 | MS.gene74532:CDS | 35.0% | |
| GAGGATGAAACAAATGAGAA+AGG | - | chr2.3:59447506-59447525 | MS.gene74532:CDS | 35.0% | |
| GTCTACTGCAGAATTAGAAA+AGG | - | chr2.3:59448114-59448133 | MS.gene74532:CDS | 35.0% | |
| GTTTGGGTAAGAAGAAAAAG+AGG | - | chr2.3:59448740-59448759 | MS.gene74532:CDS | 35.0% | |
| TAAGCTTCAATTCCTCTTCT+TGG | + | chr2.3:59448663-59448682 | None:intergenic | 35.0% | |
| TAGATTATGAGGACACAGTT+GGG | - | chr2.3:59448506-59448525 | MS.gene74532:CDS | 35.0% | |
| TCATCGATCAATAGTATCTC+TGG | + | chr2.3:59448595-59448614 | None:intergenic | 35.0% | |
| TCCTCTTTATCACCAAAATC+TGG | + | chr2.3:59447491-59447510 | None:intergenic | 35.0% | |
| TCTAATTCTGCAGTAGACAA+AGG | + | chr2.3:59448112-59448131 | None:intergenic | 35.0% | |
| TGAGGAAAAAGACAAACTCA+AGG | - | chr2.3:59447930-59447949 | MS.gene74532:CDS | 35.0% | |
| TTAGATTATGAGGACACAGT+TGG | - | chr2.3:59448505-59448524 | MS.gene74532:CDS | 35.0% | |
| TTCAATTCCTCTTCTTGGTA+AGG | + | chr2.3:59448658-59448677 | None:intergenic | 35.0% | |
| ! | ACATCCTTTTGCTTAAGAAC+AGG | + | chr2.3:59447347-59447366 | None:intergenic | 35.0% |
| ! | GAGAAAGGTATATCAAATGG+TGG | - | chr2.3:59447521-59447540 | MS.gene74532:CDS | 35.0% |
| ! | GATTTTAAATGTTGGAGAGG+AGG | - | chr2.3:59447787-59447806 | MS.gene74532:CDS | 35.0% |
| ! | GGAGATTTTAAATGTTGGAG+AGG | - | chr2.3:59447784-59447803 | MS.gene74532:CDS | 35.0% |
| ! | TACTAGTGATGATGATCTCA+TGG | - | chr2.3:59448369-59448388 | MS.gene74532:CDS | 35.0% |
| ! | TGAGGATTTTCTCACCTTAA+AGG | - | chr2.3:59447622-59447641 | MS.gene74532:CDS | 35.0% |
| ! | TGCGAAGTATTATAACGAAG+AGG | - | chr2.3:59448183-59448202 | MS.gene74532:CDS | 35.0% |
| !! | AATGTTTTTGAAGGATGTGG+TGG | - | chr2.3:59447442-59447461 | MS.gene74532:CDS | 35.0% |
| !! | ACCAGATTTTGGTGATAAAG+AGG | - | chr2.3:59447487-59447506 | MS.gene74532:CDS | 35.0% |
| !! | GAAGCCAGATTTTGAAAAAG+AGG | - | chr2.3:59448249-59448268 | MS.gene74532:CDS | 35.0% |
| !! | GTCAATGTTTTTGAAGGATG+TGG | - | chr2.3:59447439-59447458 | MS.gene74532:CDS | 35.0% |
| !! | TAGTTTTCAGGAAAATCCAG+GGG | - | chr2.3:59447868-59447887 | MS.gene74532:CDS | 35.0% |
| !! | TTTTCTGAAAGCAGCAGAAA+AGG | - | chr2.3:59447586-59447605 | MS.gene74532:CDS | 35.0% |
| !!! | GTAAGGAGCAAGTTTTTTCA+AGG | + | chr2.3:59448641-59448660 | None:intergenic | 35.0% |
| !!! | GTTAGTTTTCAGGAAAATCC+AGG | - | chr2.3:59447866-59447885 | MS.gene74532:CDS | 35.0% |
| AAAACCTAACAGATTTGGCC+TGG | - | chr2.3:59448564-59448583 | MS.gene74532:CDS | 40.0% | |
| AATCAAGGAAAGCCAAGAGA+AGG | - | chr2.3:59448959-59448978 | MS.gene74532:CDS | 40.0% | |
| AATGTGGGTAGACAAGAATG+CGG | - | chr2.3:59447763-59447782 | MS.gene74532:CDS | 40.0% | |
| ACTTGGGCTTCCTAAAGATT+GGG | - | chr2.3:59448279-59448298 | MS.gene74532:CDS | 40.0% | |
| AGAAAAGGAGTTTGACCCAA+AGG | - | chr2.3:59448129-59448148 | MS.gene74532:CDS | 40.0% | |
| AGATTATGAGGACACAGTTG+GGG | - | chr2.3:59448507-59448526 | MS.gene74532:CDS | 40.0% | |
| AGGCAATACGACAAAAGGAA+AGG | - | chr2.3:59447984-59448003 | MS.gene74532:CDS | 40.0% | |
| ATCAAACAGTTGTGTTGTGG+AGG | - | chr2.3:59448909-59448928 | MS.gene74532:CDS | 40.0% | |
| ATCAAGGAAAGCCAAGAGAA+GGG | - | chr2.3:59448960-59448979 | MS.gene74532:CDS | 40.0% | |
| ATGAATGTGGATCTGATGGT+GGG | - | chr2.3:59448302-59448321 | MS.gene74532:CDS | 40.0% | |
| CACAACACAACTGTTTGATG+AGG | + | chr2.3:59448908-59448927 | None:intergenic | 40.0% | |
| CACCCTCACTACAAAAATCA+GGG | + | chr2.3:59448216-59448235 | None:intergenic | 40.0% | |
| CCACATTCATCCCAATCTTT+AGG | + | chr2.3:59448292-59448311 | None:intergenic | 40.0% | |
| CCTAAAGATTGGGATGAATG+TGG | - | chr2.3:59448289-59448308 | MS.gene74532:CDS | 40.0% | |
| CTCATCAAACAGTTGTGTTG+TGG | - | chr2.3:59448906-59448925 | MS.gene74532:CDS | 40.0% | |
| GAAGAGAAATAAGAAGCCCA+AGG | - | chr2.3:59448864-59448883 | MS.gene74532:CDS | 40.0% | |
| GAGTCGAGACTTAAAGCATA+TGG | - | chr2.3:59449009-59449028 | MS.gene74532:CDS | 40.0% | |
| GAGTGAAGATGAGGAATTTG+AGG | - | chr2.3:59447670-59447689 | MS.gene74532:CDS | 40.0% | |
| GATGCAAGAGATACAAGAGA+AGG | - | chr2.3:59448039-59448058 | MS.gene74532:CDS | 40.0% | |
| GGAAGGAGAAACTGAAAAAG+AGG | - | chr2.3:59448390-59448409 | MS.gene74532:CDS | 40.0% | |
| GGCAATACGACAAAAGGAAA+GGG | - | chr2.3:59447985-59448004 | MS.gene74532:CDS | 40.0% | |
| GTAGGTTTGAGCATAACAAG+AGG | - | chr2.3:59447144-59447163 | MS.gene74532:CDS | 40.0% | |
| TACTTGGGCTTCCTAAAGAT+TGG | - | chr2.3:59448278-59448297 | MS.gene74532:CDS | 40.0% | |
| TCACCCTCACTACAAAAATC+AGG | + | chr2.3:59448217-59448236 | None:intergenic | 40.0% | |
| TGAGGAATTTGAGGAGAAAC+TGG | - | chr2.3:59447679-59447698 | MS.gene74532:CDS | 40.0% | |
| TTCACCTGTCTTCTCCTTTA+AGG | + | chr2.3:59447639-59447658 | None:intergenic | 40.0% | |
| ! | AGTGATGATGATCTCATGGA+AGG | - | chr2.3:59448373-59448392 | MS.gene74532:CDS | 40.0% |
| ! | GAAGCGTAAAACTGCACTTT+TGG | - | chr2.3:59448444-59448463 | MS.gene74532:CDS | 40.0% |
| ! | GACCCTGATTTTTGTAGTGA+GGG | - | chr2.3:59448211-59448230 | MS.gene74532:CDS | 40.0% |
| ! | GCAAAGCATTTGATTGAGGA+GGG | - | chr2.3:59447464-59447483 | MS.gene74532:CDS | 40.0% |
| ! | TATGCTTTAAGTCTCGACTC+TGG | + | chr2.3:59449009-59449028 | None:intergenic | 40.0% |
| ! | TGACCCTGATTTTTGTAGTG+AGG | - | chr2.3:59448210-59448229 | MS.gene74532:CDS | 40.0% |
| !! | ATAGTATCTCTGGAGTATCC+AGG | + | chr2.3:59448585-59448604 | None:intergenic | 40.0% |
| !! | TATTGGTTCACCTTCACACT+CGG | - | chr2.3:59447211-59447230 | MS.gene74532:CDS | 40.0% |
| AAAGAGCAAAGAGGAGAGAG+AGG | - | chr2.3:59447964-59447983 | MS.gene74532:CDS | 45.0% | |
| AAGCCAAGAGAAGGGAAAAC+AGG | - | chr2.3:59448968-59448987 | MS.gene74532:CDS | 45.0% | |
| ACGACAAAAGGAAAGGGATG+AGG | - | chr2.3:59447991-59448010 | MS.gene74532:CDS | 45.0% | |
| ACTTGCTCCTTACCAAGAAG+AGG | - | chr2.3:59448648-59448667 | MS.gene74532:CDS | 45.0% | |
| AGAGCAGAGAAAGAGCAAAG+AGG | - | chr2.3:59447955-59447974 | MS.gene74532:CDS | 45.0% | |
| AGCCAAGAGAAGGGAAAACA+GGG | - | chr2.3:59448969-59448988 | MS.gene74532:CDS | 45.0% | |
| ATCCTTCGTGCAGCAAGTTT+GGG | - | chr2.3:59448724-59448743 | MS.gene74532:CDS | 45.0% | |
| ATTATGAGGACACAGTTGGG+GGG | - | chr2.3:59448509-59448528 | MS.gene74532:CDS | 45.0% | |
| CAAGGTAGAGAGTGAAGATG+AGG | - | chr2.3:59447661-59447680 | MS.gene74532:CDS | 45.0% | |
| CTCACCTTAAAGGAGAAGAC+AGG | - | chr2.3:59447632-59447651 | MS.gene74532:CDS | 45.0% | |
| CTGAAAGCAGCAGAAAAGGA+TGG | - | chr2.3:59447590-59447609 | MS.gene74532:CDS | 45.0% | |
| GAGAGAGGCAATACGACAAA+AGG | - | chr2.3:59447979-59447998 | MS.gene74532:CDS | 45.0% | |
| GAGTTATGCTGATGAGCAAG+AGG | - | chr2.3:59447550-59447569 | MS.gene74532:CDS | 45.0% | |
| GATGAATGTGGATCTGATGG+TGG | - | chr2.3:59448301-59448320 | MS.gene74532:CDS | 45.0% | |
| GATTATGAGGACACAGTTGG+GGG | - | chr2.3:59448508-59448527 | MS.gene74532:CDS | 45.0% | |
| GGTTTGAGCATAACAAGAGG+CGG | - | chr2.3:59447147-59447166 | MS.gene74532:CDS | 45.0% | |
| GTATCCAGGCCAAATCTGTT+AGG | + | chr2.3:59448571-59448590 | None:intergenic | 45.0% | |
| GTTTGAGCATAACAAGAGGC+GGG | - | chr2.3:59447148-59447167 | MS.gene74532:CDS | 45.0% | |
| TAGACGAGGAATATGCTCGT+AGG | - | chr2.3:59447126-59447145 | MS.gene74532:CDS | 45.0% | |
| TAGTGAGGGTGAAGAAGACA+TGG | - | chr2.3:59448225-59448244 | MS.gene74532:CDS | 45.0% | |
| TCATCATCTTCCGAGTGTGA+AGG | + | chr2.3:59447224-59447243 | None:intergenic | 45.0% | |
| TGAAAAAGAGGACATTCCCG+AGG | - | chr2.3:59448402-59448421 | MS.gene74532:CDS | 45.0% | |
| TGAGATGGAAATTGAGAGGC+AGG | - | chr2.3:59447832-59447851 | MS.gene74532:CDS | 45.0% | |
| TGAGCAAGAGGAGTTGAAAC+AGG | - | chr2.3:59447562-59447581 | MS.gene74532:CDS | 45.0% | |
| TGGGATGAATGTGGATCTGA+TGG | - | chr2.3:59448298-59448317 | MS.gene74532:CDS | 45.0% | |
| ! | ATTGAGGAGGGACCAGATTT+TGG | - | chr2.3:59447476-59447495 | MS.gene74532:CDS | 45.0% |
| ! | GGCAAAGCATTTGATTGAGG+AGG | - | chr2.3:59447463-59447482 | MS.gene74532:CDS | 45.0% |
| ! | GGTGGCAAAGCATTTGATTG+AGG | - | chr2.3:59447460-59447479 | MS.gene74532:CDS | 45.0% |
| !! | GACTTGCTAGAATCAGCCTT+GGG | + | chr2.3:59448883-59448902 | None:intergenic | 45.0% |
| !! | TGACTTGCTAGAATCAGCCT+TGG | + | chr2.3:59448884-59448903 | None:intergenic | 45.0% |
| !!! | TGGATCTGATGGTGGGTTTT+TGG | - | chr2.3:59448309-59448328 | MS.gene74532:CDS | 45.0% |
| AAAGAGGACATTCCCGAGGA+AGG | - | chr2.3:59448406-59448425 | MS.gene74532:CDS | 50.0% | |
| AAATCCAGGGGATAGAGTGC+TGG | - | chr2.3:59447880-59447899 | MS.gene74532:CDS | 50.0% | |
| AGCAGCAGAAAAGGATGGCT+TGG | - | chr2.3:59447595-59447614 | MS.gene74532:CDS | 50.0% | |
| CATGCTGAAGATGAGGGCTA+AGG | - | chr2.3:59448699-59448718 | MS.gene74532:CDS | 50.0% | |
| GATCCTTCGTGCAGCAAGTT+TGG | - | chr2.3:59448723-59448742 | MS.gene74532:CDS | 50.0% | |
| GCAGCAGAAAAGGATGGCTT+GGG | - | chr2.3:59447596-59447615 | MS.gene74532:CDS | 50.0% | |
| GGAGAAGACAGGTGAAGACA+AGG | - | chr2.3:59447643-59447662 | MS.gene74532:CDS | 50.0% | |
| TTATGAGGACACAGTTGGGG+GGG | - | chr2.3:59448510-59448529 | MS.gene74532:CDS | 50.0% | |
| ! | AAAGGATGGCTTGGGAGATG+AGG | - | chr2.3:59447604-59447623 | MS.gene74532:CDS | 50.0% |
| ! | AATCCAGGGGATAGAGTGCT+GGG | - | chr2.3:59447881-59447900 | MS.gene74532:CDS | 50.0% |
| ! | AGCCCTGTTTTCCCTTCTCT+TGG | + | chr2.3:59448974-59448993 | None:intergenic | 50.0% |
| !! | TACCCAAACTTGCTGCACGA+AGG | + | chr2.3:59448729-59448748 | None:intergenic | 50.0% |
| AGGAAGGTGGTAGTCGGAAG+AGG | - | chr2.3:59448422-59448441 | MS.gene74532:CDS | 55.0% | |
| CTTCCGACTACCACCTTCCT+CGG | + | chr2.3:59448422-59448441 | None:intergenic | 55.0% | |
| GGTCATGCTCGTAAGGTGGA+GGG | - | chr2.3:59447902-59447921 | MS.gene74532:CDS | 55.0% | |
| TGAGCATAACAAGAGGCGGG+AGG | - | chr2.3:59447151-59447170 | MS.gene74532:CDS | 55.0% | |
| TGCTCGTAAGGTGGAGGGTT+CGG | - | chr2.3:59447907-59447926 | MS.gene74532:CDS | 55.0% | |
| TTCCCGAGGAAGGTGGTAGT+CGG | - | chr2.3:59448416-59448435 | MS.gene74532:CDS | 55.0% | |
| TTCCGACTACCACCTTCCTC+GGG | + | chr2.3:59448421-59448440 | None:intergenic | 55.0% | |
| ! | AGTGCTGGGTCATGCTCGTA+AGG | - | chr2.3:59447895-59447914 | MS.gene74532:CDS | 55.0% |
| GAGGACATTCCCGAGGAAGG+TGG | - | chr2.3:59448409-59448428 | MS.gene74532:CDS | 60.0% | |
| GCTGGGTCATGCTCGTAAGG+TGG | - | chr2.3:59447898-59447917 | MS.gene74532:CDS | 60.0% | |
| GGGTCATGCTCGTAAGGTGG+AGG | - | chr2.3:59447901-59447920 | MS.gene74532:CDS | 60.0% | |
| TGACCCAGCACTCTATCCCC+TGG | + | chr2.3:59447887-59447906 | None:intergenic | 60.0% | |
| !! | GTAAGGTGGAGGGTTCGGTG+AGG | - | chr2.3:59447912-59447931 | MS.gene74532:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 59447065 | 59449044 | 59447065 | ID=MS.gene74532 |
| chr2.3 | mRNA | 59447065 | 59449044 | 59447065 | ID=MS.gene74532.t1;Parent=MS.gene74532 |
| chr2.3 | exon | 59447065 | 59449044 | 59447065 | ID=MS.gene74532.t1.exon1;Parent=MS.gene74532.t1 |
| chr2.3 | CDS | 59447065 | 59449044 | 59447065 | ID=cds.MS.gene74532.t1;Parent=MS.gene74532.t1 |
| Gene Sequence |
| Protein sequence |
