Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97932.t1 | XP_013446172.1 | 100 | 64 | 0 | 0 | 1 | 64 | 1 | 64 | 1.70E-29 | 137.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97932.t1 | Q93XX8 | 81.2 | 64 | 12 | 0 | 1 | 64 | 1 | 64 | 4.0e-24 | 111.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97932.t1 | A0A072TRQ0 | 100.0 | 64 | 0 | 0 | 1 | 64 | 1 | 64 | 1.2e-29 | 137.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene97932 | 0.831461 | 1.65E-55 | -1.69E-46 |
| MS.gene050916 | MS.gene97932 | 0.834788 | 2.45E-56 | -1.69E-46 |
| MS.gene051330 | MS.gene97932 | 0.804315 | 2.29E-49 | -1.69E-46 |
| MS.gene056443 | MS.gene97932 | 0.813337 | 2.69E-51 | -1.69E-46 |
| MS.gene056631 | MS.gene97932 | 0.826937 | 2.06E-54 | -1.69E-46 |
| MS.gene058906 | MS.gene97932 | 0.806399 | 8.38E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene97932 | 0.859861 | 3.08E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064180 | MS.gene97932 | PPI |
| MS.gene97932 | MS.gene057730 | PPI |
| MS.gene97932 | MS.gene033017 | PPI |
| MS.gene97932 | MS.gene067809 | PPI |
| MS.gene97932 | MS.gene028023 | PPI |
| MS.gene97932 | MS.gene98436 | PPI |
| MS.gene97932 | MS.gene99744 | PPI |
| MS.gene95758 | MS.gene97932 | PPI |
| MS.gene97932 | MS.gene90954 | PPI |
| MS.gene97932 | MS.gene029242 | PPI |
| MS.gene059422 | MS.gene97932 | PPI |
| MS.gene97932 | MS.gene31515 | PPI |
| MS.gene97932 | MS.gene038800 | PPI |
| MS.gene97932 | MS.gene41916 | PPI |
| MS.gene97932 | MS.gene45344 | PPI |
| MS.gene97932 | MS.gene001986 | PPI |
| MS.gene97932 | MS.gene003501 | PPI |
| MS.gene97932 | MS.gene08205 | PPI |
| MS.gene97932 | MS.gene000714 | PPI |
| MS.gene97932 | MS.gene51868 | PPI |
| MS.gene97932 | MS.gene68979 | PPI |
| MS.gene97932 | MS.gene054186 | PPI |
| MS.gene97932 | MS.gene056257 | PPI |
| MS.gene97932 | MS.gene72894 | PPI |
| MS.gene97932 | MS.gene044498 | PPI |
| MS.gene97932 | MS.gene90957 | PPI |
| MS.gene97932 | MS.gene52097 | PPI |
| MS.gene97932 | MS.gene037324 | PPI |
| MS.gene97932 | MS.gene046040 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97932.t1 | MTR_8g069770 | 100.000 | 64 | 0 | 0 | 1 | 64 | 1 | 64 | 4.79e-44 | 135 |
| MS.gene97932.t1 | MTR_7g097110 | 85.938 | 64 | 9 | 0 | 1 | 64 | 1 | 64 | 7.70e-36 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97932.t1 | AT2G20490 | 81.250 | 64 | 12 | 0 | 1 | 64 | 1 | 64 | 1.85e-34 | 111 |
| MS.gene97932.t1 | AT2G20490 | 81.250 | 64 | 12 | 0 | 1 | 64 | 1 | 64 | 1.85e-34 | 111 |
| MS.gene97932.t1 | AT2G20490 | 79.688 | 64 | 12 | 1 | 1 | 64 | 1 | 63 | 5.32e-32 | 105 |
Find 16 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTGTTACATAAATGATAA+TGG | 0.389907 | 8.4:-33776583 | MS.gene97932:CDS |
| GAAGGAATCACCACTGGGTT+CGG | 0.421070 | 8.4:-33775403 | MS.gene97932:CDS |
| GTGCGTCTGAAGAAGCGCTT+TGG | 0.482078 | 8.4:-33774387 | MS.gene97932:CDS |
| TTCCGAGGTGGCTGCTGAGT+TGG | 0.491045 | 8.4:+33774357 | None:intergenic |
| ATGATAAATTCTCAGACCAT+AGG | 0.495274 | 8.4:-33774410 | MS.gene97932:CDS |
| GCTTCTTCAGACGCACCCTA+TGG | 0.540494 | 8.4:+33774394 | None:intergenic |
| TGGTCTGAGAATTTATCATC+GGG | 0.555795 | 8.4:+33774414 | None:intergenic |
| TGATAAATTCTCAGACCATA+GGG | 0.566431 | 8.4:-33774409 | MS.gene97932:CDS |
| ATGGTCTGAGAATTTATCAT+CGG | 0.567138 | 8.4:+33774413 | None:intergenic |
| TGCCAACTCAGCAGCCACCT+CGG | 0.572303 | 8.4:-33774359 | MS.gene97932:CDS |
| TTTCAGAAGGAATCACCACT+GGG | 0.620010 | 8.4:-33775408 | MS.gene97932:intron |
| GACTCTGTTGCCGAACCCAG+TGG | 0.655330 | 8.4:+33775393 | None:intergenic |
| CTATCTCAGTACTTCCGAGG+TGG | 0.658485 | 8.4:+33774345 | None:intergenic |
| GCAACAGAGTCAGCTCACCC+AGG | 0.664796 | 8.4:-33775381 | MS.gene97932:intron |
| TCACTATCTCAGTACTTCCG+AGG | 0.676583 | 8.4:+33774342 | None:intergenic |
| TGACAAAGTTTACACTACCA+AGG | 0.686778 | 8.4:-33776560 | MS.gene97932:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATCTTATAGTTTATA+CGG | - | chr8.4:33774651-33774670 | MS.gene97932:intron | 15.0% |
| !! | ATATATTTCACTACAAAAAA+GGG | + | chr8.4:33775189-33775208 | None:intergenic | 15.0% |
| !! | TATATATTTCACTACAAAAA+AGG | + | chr8.4:33775190-33775209 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTGTCTAAAACT+CGG | + | chr8.4:33774572-33774591 | None:intergenic | 15.0% |
| !!! | ATTATGTAAATGGTTATTTT+AGG | - | chr8.4:33775485-33775504 | MS.gene97932:intron | 15.0% |
| !!! | TAGTGTTTAAAATAGAAATA+GGG | + | chr8.4:33774418-33774437 | None:intergenic | 15.0% |
| !!! | TTATGTAAATGGTTATTTTA+GGG | - | chr8.4:33775486-33775505 | MS.gene97932:intron | 15.0% |
| !! | TATATTTCACTACAAAAAAG+GGG | + | chr8.4:33775188-33775207 | None:intergenic | 20.0% |
| !! | TGAGTTAAAACTTAAAACTA+AGG | + | chr8.4:33776372-33776391 | None:intergenic | 20.0% |
| !!! | ATAAGGTCTAATTTTAAAGA+TGG | - | chr8.4:33774840-33774859 | MS.gene97932:intron | 20.0% |
| !!! | ATCAGTCTATATATTTTACT+TGG | - | chr8.4:33776403-33776422 | MS.gene97932:intron | 20.0% |
| !!! | GTAGTGTTTAAAATAGAAAT+AGG | + | chr8.4:33774419-33774438 | None:intergenic | 20.0% |
| !!! | TAAGGTCTAATTTTAAAGAT+GGG | - | chr8.4:33774841-33774860 | MS.gene97932:intron | 20.0% |
| !!! | TATGTAAATGGTTATTTTAG+GGG | - | chr8.4:33775487-33775506 | MS.gene97932:intron | 20.0% |
| !!! | TTTTCTTTATTTGAGCTTAA+GGG | - | chr8.4:33774492-33774511 | MS.gene97932:intron | 20.0% |
| !!! | TTTTTCTTTATTTGAGCTTA+AGG | - | chr8.4:33774491-33774510 | MS.gene97932:intron | 20.0% |
| ! | AATAAGATGTTTATCCAAAC+AGG | - | chr8.4:33774762-33774781 | MS.gene97932:intron | 25.0% |
| ! | AATAGGGATAATTATTACCT+TGG | + | chr8.4:33774402-33774421 | None:intergenic | 25.0% |
| ! | ACCATAAAATGCTATGTATA+TGG | - | chr8.4:33775222-33775241 | MS.gene97932:intron | 25.0% |
| ! | ACGCTTTATCATTATGTAAA+TGG | - | chr8.4:33775475-33775494 | MS.gene97932:intron | 25.0% |
| ! | CAGTGTTACATAAATGATAA+TGG | - | chr8.4:33774359-33774378 | MS.gene97932:CDS | 25.0% |
| ! | CCATTTCAAAGCAAAAAAAT+GGG | - | chr8.4:33775619-33775638 | MS.gene97932:intron | 25.0% |
| ! | CTTATAGTTTATACGGAAAT+AGG | - | chr8.4:33774658-33774677 | MS.gene97932:intron | 25.0% |
| ! | CTTTGATAAAAATACAGGTT+GGG | + | chr8.4:33775852-33775871 | None:intergenic | 25.0% |
| ! | GTAAATTCAGGATAATAAAG+TGG | - | chr8.4:33775583-33775602 | MS.gene97932:intron | 25.0% |
| ! | TCCATTTCAAAGCAAAAAAA+TGG | - | chr8.4:33775618-33775637 | MS.gene97932:intron | 25.0% |
| ! | TTATTATCCTGAATTTACCT+GGG | + | chr8.4:33775581-33775600 | None:intergenic | 25.0% |
| ! | TTTATTATCCTGAATTTACC+TGG | + | chr8.4:33775582-33775601 | None:intergenic | 25.0% |
| !! | TCCATATACATAGCATTTTA+TGG | + | chr8.4:33775226-33775245 | None:intergenic | 25.0% |
| !!! | ATAAAGCGTTTTCTTTTCTT+GGG | + | chr8.4:33775464-33775483 | None:intergenic | 25.0% |
| !!! | ATTTTTTCATGGAGATAAAG+AGG | - | chr8.4:33775133-33775152 | MS.gene97932:intron | 25.0% |
| !!! | GTTTTTGGTTTATTGAATTG+TGG | - | chr8.4:33775731-33775750 | MS.gene97932:intron | 25.0% |
| !!! | TTTGCTTCATTTAGAGTTTT+TGG | - | chr8.4:33775716-33775735 | MS.gene97932:intron | 25.0% |
| !!! | TTTTTTCATGGAGATAAAGA+GGG | - | chr8.4:33775134-33775153 | MS.gene97932:intron | 25.0% |
| AACCAAAATCAGTGAAGTAA+TGG | + | chr8.4:33776457-33776476 | None:intergenic | 30.0% | |
| AATCATCTTCACATTTAGTG+TGG | - | chr8.4:33775368-33775387 | MS.gene97932:intron | 30.0% | |
| AGTATAAGAATGTTGAGACA+TGG | - | chr8.4:33775265-33775284 | MS.gene97932:intron | 30.0% | |
| ATGATAAATTCTCAGACCAT+AGG | - | chr8.4:33776532-33776551 | MS.gene97932:intron | 30.0% | |
| ATGGTCTGAGAATTTATCAT+CGG | + | chr8.4:33776532-33776551 | None:intergenic | 30.0% | |
| ATTCATCAACAACTGATCTA+TGG | - | chr8.4:33776301-33776320 | MS.gene97932:intron | 30.0% | |
| CTGCAATATAACAGATTTAG+AGG | - | chr8.4:33776206-33776225 | MS.gene97932:intron | 30.0% | |
| GCTTTGATAAAAATACAGGT+TGG | + | chr8.4:33775853-33775872 | None:intergenic | 30.0% | |
| GTATAAGAATGTTGAGACAT+GGG | - | chr8.4:33775266-33775285 | MS.gene97932:intron | 30.0% | |
| TAAATGAAGCAAACACATCA+TGG | + | chr8.4:33775709-33775728 | None:intergenic | 30.0% | |
| TGATAAATTCTCAGACCATA+GGG | - | chr8.4:33776533-33776552 | MS.gene97932:intron | 30.0% | |
| TGTTTGAAAAGTCAAAAGAC+CGG | + | chr8.4:33775904-33775923 | None:intergenic | 30.0% | |
| TTCGCTTATTAGCATAAGTA+AGG | + | chr8.4:33774807-33774826 | None:intergenic | 30.0% | |
| TTGGTTTATTGAATTGTGGT+GGG | - | chr8.4:33775735-33775754 | MS.gene97932:intron | 30.0% | |
| TTTAGACAAGCTTGTCAATT+CGG | + | chr8.4:33775344-33775363 | None:intergenic | 30.0% | |
| ! | GATCAAACTGTTAGCTTAAT+GGG | + | chr8.4:33775961-33775980 | None:intergenic | 30.0% |
| ! | TATTCTTTTGCACTCAGTAT+GGG | + | chr8.4:33776128-33776147 | None:intergenic | 30.0% |
| ! | TGATCAAACTGTTAGCTTAA+TGG | + | chr8.4:33775962-33775981 | None:intergenic | 30.0% |
| ! | TGCAGCTTTGATAAAAATAC+AGG | + | chr8.4:33775857-33775876 | None:intergenic | 30.0% |
| ! | TTATTCTTTTGCACTCAGTA+TGG | + | chr8.4:33776129-33776148 | None:intergenic | 30.0% |
| ! | TTTGGTTTATTGAATTGTGG+TGG | - | chr8.4:33775734-33775753 | MS.gene97932:intron | 30.0% |
| !! | GATAAAGCGTTTTCTTTTCT+TGG | + | chr8.4:33775465-33775484 | None:intergenic | 30.0% |
| !!! | CCCATTTTTTTGCTTTGAAA+TGG | + | chr8.4:33775622-33775641 | None:intergenic | 30.0% |
| !!! | GGAAGCAGTATATTTTTTCA+TGG | - | chr8.4:33775122-33775141 | MS.gene97932:intron | 30.0% |
| !!! | TATGGTTTTGATTTCCACAT+GGG | - | chr8.4:33776319-33776338 | MS.gene97932:intron | 30.0% |
| AAAGCGGTAGCTAAAACAAA+GGG | + | chr8.4:33775426-33775445 | None:intergenic | 35.0% | |
| CAGTTTGATCAATCCTGTTT+AGG | - | chr8.4:33775971-33775990 | MS.gene97932:intron | 35.0% | |
| CATGTAAGTAAGTCCTAAAC+AGG | + | chr8.4:33775987-33776006 | None:intergenic | 35.0% | |
| CGTTGTTACATATGTAGCAT+TGG | + | chr8.4:33775066-33775085 | None:intergenic | 35.0% | |
| GACAGAAAGTGATCATAAAG+CGG | + | chr8.4:33775442-33775461 | None:intergenic | 35.0% | |
| TAAAACTCGGTATACTGCAA+AGG | + | chr8.4:33774559-33774578 | None:intergenic | 35.0% | |
| TAAAGCGGTAGCTAAAACAA+AGG | + | chr8.4:33775427-33775446 | None:intergenic | 35.0% | |
| TAAGGAAGCTCTTTGAACTT+GGG | + | chr8.4:33774789-33774808 | None:intergenic | 35.0% | |
| TATCTGCATTTGCCTTTGAA+AGG | - | chr8.4:33776093-33776112 | MS.gene97932:intron | 35.0% | |
| TATGCTAATAAGCGAATCTG+TGG | - | chr8.4:33774811-33774830 | MS.gene97932:intron | 35.0% | |
| TCCAATACCATTGAGAAACA+TGG | + | chr8.4:33776281-33776300 | None:intergenic | 35.0% | |
| TGACAAAGTTTACACTACCA+AGG | - | chr8.4:33774382-33774401 | MS.gene97932:CDS | 35.0% | |
| TGGTCTGAGAATTTATCATC+GGG | + | chr8.4:33776531-33776550 | None:intergenic | 35.0% | |
| TGGTTTATTGAATTGTGGTG+GGG | - | chr8.4:33775736-33775755 | MS.gene97932:intron | 35.0% | |
| TTACCAAGAACAAGGTAAGT+GGG | + | chr8.4:33775793-33775812 | None:intergenic | 35.0% | |
| ! | AGTAAGCTGATAGTGAAACA+GGG | + | chr8.4:33776063-33776082 | None:intergenic | 35.0% |
| ! | CATAGCATTTTATGGTCTCT+TGG | + | chr8.4:33775218-33775237 | None:intergenic | 35.0% |
| !! | AAGATGGGTTTTGTACTGAT+AGG | - | chr8.4:33774856-33774875 | MS.gene97932:intron | 35.0% |
| !! | ATTGGATCTATCGGATTAGT+TGG | - | chr8.4:33774532-33774551 | MS.gene97932:intron | 35.0% |
| !!! | AGTTGCTCTTTGTTTTCAGA+AGG | - | chr8.4:33775521-33775540 | MS.gene97932:intron | 35.0% |
| !!! | CACCATTACTTCACTGATTT+TGG | - | chr8.4:33776452-33776471 | MS.gene97932:intron | 35.0% |
| !!! | CTATGGTTTTGATTTCCACA+TGG | - | chr8.4:33776318-33776337 | MS.gene97932:intron | 35.0% |
| AAATGCAATTGTGGCCACAT+TGG | - | chr8.4:33776255-33776274 | MS.gene97932:intron | 40.0% | |
| AAGCGGTAGCTAAAACAAAG+GGG | + | chr8.4:33775425-33775444 | None:intergenic | 40.0% | |
| ACATTGGCCATGTTTCTCAA+TGG | - | chr8.4:33776271-33776290 | MS.gene97932:intron | 40.0% | |
| ATTCGCTGTCTAACACATGT+TGG | - | chr8.4:33774950-33774969 | MS.gene97932:intron | 40.0% | |
| ATTGAGAAACATGGCCAATG+TGG | + | chr8.4:33776272-33776291 | None:intergenic | 40.0% | |
| CAACATTGACACATGGACAT+CGG | + | chr8.4:33775029-33775048 | None:intergenic | 40.0% | |
| CGACATCACAAATGCAATTG+TGG | - | chr8.4:33776246-33776265 | MS.gene97932:intron | 40.0% | |
| CTGTTTCACTATCAGCTTAC+TGG | - | chr8.4:33776062-33776081 | MS.gene97932:intron | 40.0% | |
| GACATACAGAGTGTACAGTT+AGG | + | chr8.4:33775766-33775785 | None:intergenic | 40.0% | |
| GCCATGTTTCTCAATGGTAT+TGG | - | chr8.4:33776277-33776296 | MS.gene97932:intron | 40.0% | |
| GGTTTATTGAATTGTGGTGG+GGG | - | chr8.4:33775737-33775756 | MS.gene97932:intron | 40.0% | |
| GTAAGGAAGCTCTTTGAACT+TGG | + | chr8.4:33774790-33774809 | None:intergenic | 40.0% | |
| GTCTAACACATGTTGGTATC+AGG | - | chr8.4:33774957-33774976 | MS.gene97932:intron | 40.0% | |
| GTTACCAAGAACAAGGTAAG+TGG | + | chr8.4:33775794-33775813 | None:intergenic | 40.0% | |
| TATATGCATCTACTCCCATG+TGG | + | chr8.4:33776336-33776355 | None:intergenic | 40.0% | |
| TGTTGCCACAATATGACTGT+CGG | - | chr8.4:33775101-33775120 | MS.gene97932:intron | 40.0% | |
| TTATATTGCAGCCGCAGTTA+CGG | + | chr8.4:33776197-33776216 | None:intergenic | 40.0% | |
| TTTCAGAAGGAATCACCACT+GGG | - | chr8.4:33775534-33775553 | MS.gene97932:intron | 40.0% | |
| ! | AATGGTGGGATTGGATCTAT+CGG | - | chr8.4:33774523-33774542 | MS.gene97932:intron | 40.0% |
| ! | AGCTTAAGGGCATGTTTGAA+TGG | - | chr8.4:33774505-33774524 | MS.gene97932:intron | 40.0% |
| ! | AGTTCTGATGTTGCTGTATG+TGG | - | chr8.4:33775679-33775698 | MS.gene97932:intron | 40.0% |
| ! | ATACAGGTTGGGATCATATC+AGG | + | chr8.4:33775841-33775860 | None:intergenic | 40.0% |
| ! | CAGTAAGCTGATAGTGAAAC+AGG | + | chr8.4:33776064-33776083 | None:intergenic | 40.0% |
| ! | TAAGGGCATGTTTGAATGGT+GGG | - | chr8.4:33774509-33774528 | MS.gene97932:intron | 40.0% |
| ! | TTAAGGGCATGTTTGAATGG+TGG | - | chr8.4:33774508-33774527 | MS.gene97932:intron | 40.0% |
| ! | TTTTCAGAAGGAATCACCAC+TGG | - | chr8.4:33775533-33775552 | MS.gene97932:intron | 40.0% |
| AGCGGTAGCTAAAACAAAGG+GGG | + | chr8.4:33775424-33775443 | None:intergenic | 45.0% | |
| CCAGACACAACATTGACACA+TGG | + | chr8.4:33775036-33775055 | None:intergenic | 45.0% | |
| CCATGTGTCAATGTTGTGTC+TGG | - | chr8.4:33775033-33775052 | MS.gene97932:intron | 45.0% | |
| CTTTGAACTTGGGTCCTGTT+TGG | + | chr8.4:33774779-33774798 | None:intergenic | 45.0% | |
| GAACCCACTTACCTTGTTCT+TGG | - | chr8.4:33775787-33775806 | MS.gene97932:intron | 45.0% | |
| GCGAATACGCCTTCATTCTA+AGG | + | chr8.4:33774936-33774955 | None:intergenic | 45.0% | |
| GGGTACTTGCTTCCTTTCAA+AGG | + | chr8.4:33776108-33776127 | None:intergenic | 45.0% | |
| TACGGTCGTAGAAGGGTTTA+GGG | + | chr8.4:33776179-33776198 | None:intergenic | 45.0% | |
| TGCTTCCGACAGTCATATTG+TGG | + | chr8.4:33775109-33775128 | None:intergenic | 45.0% | |
| TTACGGTCGTAGAAGGGTTT+AGG | + | chr8.4:33776180-33776199 | None:intergenic | 45.0% | |
| TTGAGACATGGGCAGAATGT+TGG | - | chr8.4:33775277-33775296 | MS.gene97932:intron | 45.0% | |
| ! | CGAATCTGTGGACTGTGATA+AGG | - | chr8.4:33774823-33774842 | MS.gene97932:intron | 45.0% |
| ! | GAGCTTTTGCATAGAATCGC+CGG | - | chr8.4:33775882-33775901 | MS.gene97932:intron | 45.0% |
| ! | GCACTGACACCTTAGAATGA+AGG | - | chr8.4:33774924-33774943 | MS.gene97932:intron | 45.0% |
| ! | GCATGTTTGAATGGTGGGAT+TGG | - | chr8.4:33774514-33774533 | MS.gene97932:intron | 45.0% |
| CAGCTCACCCAGGTAAATTC+AGG | - | chr8.4:33775571-33775590 | MS.gene97932:intron | 50.0% | |
| CGAGCGTGTTACCAAGAACA+AGG | + | chr8.4:33775801-33775820 | None:intergenic | 50.0% | |
| GAAGGAATCACCACTGGGTT+CGG | - | chr8.4:33775539-33775558 | MS.gene97932:intron | 50.0% | |
| TGGTATCAGGCACAAACACG+TGG | - | chr8.4:33774970-33774989 | MS.gene97932:intron | 50.0% | |
| ! | CTAAGGTGTCAGTGCTACGT+AGG | + | chr8.4:33774919-33774938 | None:intergenic | 50.0% |
| CCCTTCTACGACCGTAACTG+CGG | - | chr8.4:33776183-33776202 | MS.gene97932:intron | 55.0% | |
| CCGCAGTTACGGTCGTAGAA+GGG | + | chr8.4:33776186-33776205 | None:intergenic | 55.0% | |
| GCTTCTTCAGACGCACCCTA+TGG | + | chr8.4:33776551-33776570 | None:intergenic | 55.0% | |
| !! | GTGCGTCTGAAGAAGCGCTT+TGG | - | chr8.4:33776555-33776574 | MS.gene97932:intron | 55.0% |
| GACTCTGTTGCCGAACCCAG+TGG | + | chr8.4:33775552-33775571 | None:intergenic | 60.0% | |
| GCAACAGAGTCAGCTCACCC+AGG | - | chr8.4:33775561-33775580 | MS.gene97932:intron | 60.0% | |
| GCCGCAGTTACGGTCGTAGA+AGG | + | chr8.4:33776187-33776206 | None:intergenic | 60.0% | |
| TGCCAACTCAGCAGCCACCT+CGG | - | chr8.4:33776583-33776602 | MS.gene97932:CDS | 60.0% | |
| TTCCGAGGTGGCTGCTGAGT+TGG | + | chr8.4:33776588-33776607 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 33774350 | 33776614 | 33774350 | ID=MS.gene97932 |
| chr8.4 | mRNA | 33774350 | 33776614 | 33774350 | ID=MS.gene97932.t1;Parent=MS.gene97932 |
| chr8.4 | exon | 33776561 | 33776614 | 33776561 | ID=MS.gene97932.t1.exon1;Parent=MS.gene97932.t1 |
| chr8.4 | CDS | 33776561 | 33776614 | 33776561 | ID=cds.MS.gene97932.t1;Parent=MS.gene97932.t1 |
| chr8.4 | exon | 33775382 | 33775424 | 33775382 | ID=MS.gene97932.t1.exon2;Parent=MS.gene97932.t1 |
| chr8.4 | CDS | 33775382 | 33775424 | 33775382 | ID=cds.MS.gene97932.t1;Parent=MS.gene97932.t1 |
| chr8.4 | exon | 33774350 | 33774447 | 33774350 | ID=MS.gene97932.t1.exon3;Parent=MS.gene97932.t1 |
| chr8.4 | CDS | 33774350 | 33774447 | 33774350 | ID=cds.MS.gene97932.t1;Parent=MS.gene97932.t1 |
| Gene Sequence |
| Protein sequence |
