Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065711.t1 | XP_013467919.1 | 100 | 146 | 0 | 0 | 54 | 199 | 1 | 146 | 4.00E-82 | 314.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065711.t1 | Q9SVD7 | 92.5 | 146 | 11 | 0 | 54 | 199 | 1 | 146 | 3.6e-79 | 295.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065711.t1 | B7FNB3 | 100.0 | 146 | 0 | 0 | 54 | 199 | 1 | 146 | 2.9e-82 | 314.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene065711 | -0.8414 | 4.86E-58 | -1.69E-46 |
| MS.gene049435 | MS.gene065711 | -0.807671 | 4.51E-50 | -1.69E-46 |
| MS.gene049452 | MS.gene065711 | -0.817411 | 3.34E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene065711 | -0.821074 | 4.90E-53 | -1.69E-46 |
| MS.gene050020 | MS.gene065711 | -0.804862 | 1.76E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene065711 | -0.810886 | 9.22E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene065711 | -0.827196 | 1.79E-54 | -1.69E-46 |
| MS.gene050905 | MS.gene065711 | 0.815598 | 8.52E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene065711 | -0.827317 | 1.67E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene065711 | -0.81357 | 2.39E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene065711 | -0.803707 | 3.07E-49 | -1.69E-46 |
| MS.gene052056 | MS.gene065711 | 0.807427 | 5.08E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene065711 | 0.804347 | 2.26E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene065711 | -0.842396 | 2.65E-58 | -1.69E-46 |
| MS.gene052582 | MS.gene065711 | -0.802163 | 6.39E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene065711 | -0.810461 | 1.14E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene065711 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene065711 | -0.840549 | 8.13E-58 | -1.69E-46 |
| MS.gene052867 | MS.gene065711 | -0.808602 | 2.86E-50 | -1.69E-46 |
| MS.gene052965 | MS.gene065711 | 0.804914 | 1.72E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene065711 | -0.837367 | 5.42E-57 | -1.69E-46 |
| MS.gene053166 | MS.gene065711 | -0.837958 | 3.82E-57 | -1.69E-46 |
| MS.gene05415 | MS.gene065711 | -0.809255 | 2.07E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene065711 | -0.83963 | 1.41E-57 | -1.69E-46 |
| MS.gene05423 | MS.gene065711 | -0.803029 | 4.24E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene065711 | 0.810962 | 8.88E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene065711 | -0.835296 | 1.82E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene065711 | -0.828218 | 1.02E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene065711 | -0.814954 | 1.18E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene065711 | -0.800358 | 1.50E-48 | -1.69E-46 |
| MS.gene055227 | MS.gene065711 | -0.801332 | 9.47E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene065711 | -0.803784 | 2.96E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene065711 | -0.800795 | 1.22E-48 | -1.69E-46 |
| MS.gene055466 | MS.gene065711 | -0.800901 | 1.16E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene065711 | -0.834187 | 3.46E-56 | -1.69E-46 |
| MS.gene055841 | MS.gene065711 | -0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene065711 | -0.81057 | 1.08E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene065711 | -0.813779 | 2.15E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene065711 | -0.820644 | 6.15E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene065711 | -0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene065711 | -0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene065711 | -0.830378 | 3.04E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene065711 | -0.800748 | 1.25E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene065711 | -0.847712 | 9.72E-60 | -1.69E-46 |
| MS.gene058783 | MS.gene065711 | -0.811366 | 7.26E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene065711 | -0.815483 | 9.03E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene065711 | -0.812517 | 4.07E-51 | -1.69E-46 |
| MS.gene05979 | MS.gene065711 | -0.830882 | 2.29E-55 | -1.69E-46 |
| MS.gene059842 | MS.gene065711 | -0.832003 | 1.21E-55 | -1.69E-46 |
| MS.gene060011 | MS.gene065711 | -0.815246 | 1.02E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene065711 | 0.886565 | 3.06E-72 | -1.69E-46 |
| MS.gene060322 | MS.gene065711 | -0.804964 | 1.68E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene065711 | -0.812113 | 4.99E-51 | -1.69E-46 |
| MS.gene060634 | MS.gene065711 | 0.849976 | 2.29E-60 | -1.69E-46 |
| MS.gene060802 | MS.gene065711 | -0.813833 | 2.10E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene065711 | -0.842539 | 2.43E-58 | -1.69E-46 |
| MS.gene061040 | MS.gene065711 | 0.813968 | 1.96E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29973 | MS.gene065711 | PPI |
| MS.gene065711 | MS.gene015674 | PPI |
| MS.gene065711 | MS.gene020503 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065711.t1 | MTR_1g058100 | 100.000 | 146 | 0 | 0 | 54 | 199 | 1 | 146 | 1.39e-108 | 307 |
| MS.gene065711.t1 | MTR_1g058100 | 98.649 | 148 | 0 | 1 | 54 | 199 | 1 | 148 | 1.31e-106 | 302 |
| MS.gene065711.t1 | MTR_1g058100 | 87.671 | 146 | 0 | 1 | 54 | 199 | 1 | 128 | 4.37e-89 | 257 |
| MS.gene065711.t1 | MTR_8g105010 | 79.577 | 142 | 29 | 0 | 56 | 197 | 1 | 142 | 1.16e-82 | 242 |
| MS.gene065711.t1 | MTR_8g105010 | 80.000 | 140 | 28 | 0 | 56 | 195 | 1 | 140 | 1.80e-81 | 239 |
| MS.gene065711.t1 | MTR_1g058100 | 100.000 | 101 | 0 | 0 | 54 | 154 | 1 | 101 | 9.96e-72 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065711.t1 | AT3G52560 | 92.466 | 146 | 11 | 0 | 54 | 199 | 1 | 146 | 3.33e-101 | 289 |
| MS.gene065711.t1 | AT2G36060 | 93.151 | 146 | 9 | 1 | 54 | 199 | 1 | 145 | 6.21e-101 | 288 |
| MS.gene065711.t1 | AT3G52560 | 91.837 | 147 | 11 | 1 | 54 | 199 | 1 | 147 | 2.51e-99 | 284 |
| MS.gene065711.t1 | AT2G36060 | 92.517 | 147 | 9 | 2 | 54 | 199 | 1 | 146 | 3.48e-99 | 283 |
| MS.gene065711.t1 | AT2G36060 | 92.466 | 146 | 9 | 2 | 54 | 199 | 1 | 144 | 2.16e-98 | 281 |
| MS.gene065711.t1 | AT3G52560 | 82.317 | 164 | 11 | 1 | 54 | 199 | 1 | 164 | 7.33e-97 | 278 |
| MS.gene065711.t1 | AT1G23260 | 75.177 | 141 | 35 | 0 | 56 | 196 | 1 | 141 | 1.28e-78 | 232 |
| MS.gene065711.t1 | AT1G70660 | 73.239 | 142 | 38 | 0 | 56 | 197 | 1 | 142 | 3.92e-77 | 228 |
| MS.gene065711.t1 | AT1G70660 | 73.239 | 142 | 38 | 0 | 56 | 197 | 1 | 142 | 9.66e-77 | 227 |
| MS.gene065711.t1 | AT3G52560 | 90.000 | 110 | 10 | 1 | 91 | 199 | 1 | 110 | 4.91e-72 | 214 |
| MS.gene065711.t1 | AT1G70650 | 72.993 | 137 | 37 | 0 | 61 | 197 | 442 | 578 | 1.18e-69 | 223 |
| MS.gene065711.t1 | AT1G23260 | 72.642 | 106 | 29 | 0 | 91 | 196 | 1 | 106 | 2.47e-56 | 174 |
Find 66 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCCATTTCTTTCTTCAGC+TGG | 0.199609 | 1.2:+45683511 | None:intergenic |
| CAGGTTGAACCAAAGAAATT+TGG | 0.239713 | 1.2:-45683582 | MS.gene065711:CDS |
| GGAGTTGGAACCCAGTAAAA+TGG | 0.280812 | 1.2:+45686989 | None:intergenic |
| AATTTGGGCTTCTTGCAAAT+TGG | 0.294147 | 1.2:-45683566 | MS.gene065711:CDS |
| GGAGGTGTCGTTTGTTTGTT+TGG | 0.296147 | 1.2:-45687023 | MS.gene065711:CDS |
| GCAAGAAGCCCAAATTTCTT+TGG | 0.297912 | 1.2:+45683573 | None:intergenic |
| TGCTAAAAGTAAGTTCCTTC+TGG | 0.317643 | 1.2:+45683459 | None:intergenic |
| TCCAAGGAACTTCAGATTGC+TGG | 0.330124 | 1.2:-45684655 | MS.gene065711:CDS |
| TCTTGGACTGGCACCATCAT+TGG | 0.337902 | 1.2:-45684549 | MS.gene065711:CDS |
| CTGATACCACGCCAGTTTCA+TGG | 0.343773 | 1.2:+45683766 | None:intergenic |
| CTGGAGGCTGGACAAGCTTC+CGG | 0.358439 | 1.2:+45683478 | None:intergenic |
| AGGTTGAACCAAAGAAATTT+GGG | 0.360917 | 1.2:-45683581 | MS.gene065711:CDS |
| GAGCTTGAACGAGGTGAAAA+AGG | 0.363928 | 1.2:-45684630 | MS.gene065711:CDS |
| TCTTGGAAGGCTTCACTTGA+TGG | 0.372021 | 1.2:-45686963 | MS.gene065711:CDS |
| CAGAGAAATACTTACATTAT+GGG | 0.376890 | 1.2:+45684524 | None:intergenic |
| TTGATGGGATGCCGGTCTCT+AGG | 0.381700 | 1.2:-45686947 | MS.gene065711:CDS |
| TGGGTTCCAACTCCTGATCT+TGG | 0.387707 | 1.2:-45686980 | MS.gene065711:CDS |
| TGCCATTTCTTTCTTCAGCT+GGG | 0.392353 | 1.2:+45683512 | None:intergenic |
| ATGACATTTACATGCGCTCT+TGG | 0.418963 | 1.2:-45684566 | MS.gene065711:CDS |
| AAATGGCAGCCCCTCATAAC+CGG | 0.419954 | 1.2:-45683497 | MS.gene065711:CDS |
| TCCATGACGCTTGGCTCAGC+CGG | 0.429765 | 1.2:-45685840 | MS.gene065711:CDS |
| TGATGGGATGCCGGTCTCTA+GGG | 0.433401 | 1.2:-45686946 | MS.gene065711:CDS |
| ATTTACATGCGCTCTTGGAC+TGG | 0.438813 | 1.2:-45684561 | MS.gene065711:CDS |
| TGGACAAGCTTCCGGTTATG+AGG | 0.443651 | 1.2:+45683486 | None:intergenic |
| AGTAAGTTCCTTCTGGAGGC+TGG | 0.451073 | 1.2:+45683466 | None:intergenic |
| TCCAGCAATCTGAAGTTCCT+TGG | 0.453074 | 1.2:+45684654 | None:intergenic |
| CAGAAAAGCCGCCAAGTGTT+CGG | 0.455334 | 1.2:-45683821 | MS.gene065711:CDS |
| GAGGTGTCGTTTGTTTGTTT+GGG | 0.457180 | 1.2:-45687022 | MS.gene065711:CDS |
| ACTTGTGTTAACCATGAAAC+TGG | 0.470899 | 1.2:-45683777 | MS.gene065711:CDS |
| GAGTTGGAACCCAGTAAAAT+GGG | 0.488203 | 1.2:+45686990 | None:intergenic |
| AAGTGAAGCCTTCCAAGATC+AGG | 0.488997 | 1.2:+45686968 | None:intergenic |
| CTTGGAAGGCTTCACTTGAT+GGG | 0.492138 | 1.2:-45686962 | MS.gene065711:CDS |
| TTCCAACTCCTGATCTTGGA+AGG | 0.496458 | 1.2:-45686976 | MS.gene065711:CDS |
| AGAGAAATACTTACATTATG+GGG | 0.501433 | 1.2:+45684525 | None:intergenic |
| CTAACCGACGACACTGGATC+CGG | 0.502436 | 1.2:+45685821 | None:intergenic |
| GGCTTCACTTGATGGGATGC+CGG | 0.504461 | 1.2:-45686955 | MS.gene065711:CDS |
| CGTGAATGAAACCGAACACT+TGG | 0.519764 | 1.2:+45683810 | None:intergenic |
| GGACAAGCTTCCGGTTATGA+GGG | 0.527492 | 1.2:+45683487 | None:intergenic |
| GTCTCTAGGGGCCACCGACA+AGG | 0.530672 | 1.2:-45686933 | MS.gene065711:intron |
| GAATGAAACCGAACACTTGG+CGG | 0.532883 | 1.2:+45683813 | None:intergenic |
| TCCGGCTGAGCCAAGCGTCA+TGG | 0.534232 | 1.2:+45685839 | None:intergenic |
| TGTCGGTGGCCCCTAGAGAC+CGG | 0.534957 | 1.2:+45686936 | None:intergenic |
| CAAAATCCATCCATGACGCT+TGG | 0.537360 | 1.2:-45685849 | MS.gene065711:CDS |
| GACCCAGCTGAAGAAAGAAA+TGG | 0.541436 | 1.2:-45683514 | MS.gene065711:CDS |
| TGGTAACTAACCGACGACAC+TGG | 0.573621 | 1.2:+45685815 | None:intergenic |
| TACTTTCAGACTGTACATGA+AGG | 0.578155 | 1.2:-45683885 | MS.gene065711:intron |
| GCTGAGCCAAGCGTCATGGA+TGG | 0.584022 | 1.2:+45685843 | None:intergenic |
| TGACAACTTAGACACCTTGT+CGG | 0.588252 | 1.2:+45686919 | None:intergenic |
| GTTAGCTATGGAATGGATGA+TGG | 0.588764 | 1.2:-45684591 | MS.gene065711:CDS |
| GATGGGATGCCGGTCTCTAG+GGG | 0.589555 | 1.2:-45686945 | MS.gene065711:CDS |
| GGTGATGGCACTGTTAGCTA+TGG | 0.599683 | 1.2:-45684603 | MS.gene065711:CDS |
| TGCGCTTCAATGCAGTTCCA+AGG | 0.600751 | 1.2:-45684671 | MS.gene065711:intron |
| AAGCTTGTCCAGCCTCCAGA+AGG | 0.603455 | 1.2:-45683474 | MS.gene065711:CDS |
| AAGGAACTTCAGATTGCTGG+AGG | 0.606974 | 1.2:-45684652 | MS.gene065711:CDS |
| AGCCTTCCAAGATCAGGAGT+TGG | 0.608522 | 1.2:+45686974 | None:intergenic |
| GACAAGCTTCCGGTTATGAG+GGG | 0.622492 | 1.2:+45683488 | None:intergenic |
| TCAGCCGGATCCAGTGTCGT+CGG | 0.640126 | 1.2:-45685825 | MS.gene065711:intron |
| TGGCACTGTTAGCTATGGAA+TGG | 0.640972 | 1.2:-45684598 | MS.gene065711:CDS |
| GAGAAATACTTACATTATGG+GGG | 0.651874 | 1.2:+45684526 | None:intergenic |
| TTGCTGGAGGAGCTTGAACG+AGG | 0.667991 | 1.2:-45684639 | MS.gene065711:CDS |
| GTGAGTGTTGTGGATCTGAT+CGG | 0.669660 | 1.2:+45685877 | None:intergenic |
| TAAAAGTAAGTTCCTTCTGG+AGG | 0.670760 | 1.2:+45683462 | None:intergenic |
| CAACTTAGACACCTTGTCGG+TGG | 0.678112 | 1.2:+45686922 | None:intergenic |
| TTGGCAAAGAGAGTACAGCA+TGG | 0.708361 | 1.2:-45683547 | MS.gene065711:CDS |
| TGTTAACCATGAAACTGGCG+TGG | 0.731270 | 1.2:-45683772 | MS.gene065711:intron |
| GCAAAGAGAGTACAGCATGG+AGG | 0.733074 | 1.2:-45683544 | MS.gene065711:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATCTTTATGATACATA+TGG | - | chr1.2:45683757-45683776 | MS.gene065711:intron | 15.0% |
| !! | ATGTAATAAATAAAATCAAC+GGG | + | chr1.2:45684254-45684273 | None:intergenic | 15.0% |
| !! | ATTGAAATAGAAAAAGAAAA+TGG | + | chr1.2:45684530-45684549 | None:intergenic | 15.0% |
| !! | GATGTAATAAATAAAATCAA+CGG | + | chr1.2:45684255-45684274 | None:intergenic | 15.0% |
| !! | TAAAAAGAAAAATGGTAAAA+TGG | - | chr1.2:45685344-45685363 | MS.gene065711:intron | 15.0% |
| !!! | ATGTAATTGTTGTTAATTTT+GGG | - | chr1.2:45684844-45684863 | MS.gene065711:intron | 15.0% |
| !!! | TATGTAATTGTTGTTAATTT+TGG | - | chr1.2:45684843-45684862 | MS.gene065711:intron | 15.0% |
| !!! | TGATACTTTAAAAAGAAAAA+TGG | - | chr1.2:45685336-45685355 | MS.gene065711:intron | 15.0% |
| !! | AATCAAGATTTATATGAAAC+AGG | - | chr1.2:45686885-45686904 | MS.gene065711:intron | 20.0% |
| !! | AGAAAAATACAAGATCATTA+TGG | + | chr1.2:45683950-45683969 | None:intergenic | 20.0% |
| !! | ATATGAAATATTGTTGTATC+TGG | - | chr1.2:45686469-45686488 | MS.gene065711:intron | 20.0% |
| !! | CTGTAATTGAATTATAATTC+TGG | - | chr1.2:45685400-45685419 | MS.gene065711:intron | 20.0% |
| !! | GAAAAATACAAGATCATTAT+GGG | + | chr1.2:45683949-45683968 | None:intergenic | 20.0% |
| !! | GAATGATAAAACTCTATTTA+AGG | + | chr1.2:45684288-45684307 | None:intergenic | 20.0% |
| !!! | ATTAATTGTTTGAGTTATGT+AGG | + | chr1.2:45684319-45684338 | None:intergenic | 20.0% |
| !!! | GTATATTTTTCCAAAATAGT+GGG | - | chr1.2:45684412-45684431 | MS.gene065711:intron | 20.0% |
| !!! | GTTAAGATTTTCTTGAAATT+TGG | + | chr1.2:45684495-45684514 | None:intergenic | 20.0% |
| !!! | TGTATATTTTTCCAAAATAG+TGG | - | chr1.2:45684411-45684430 | MS.gene065711:intron | 20.0% |
| !!! | TTTGTTTTTTTTTTTACCGA+TGG | - | chr1.2:45684873-45684892 | MS.gene065711:intron | 20.0% |
| !!! | TTTTTAGTAATTTCTTGTTG+AGG | - | chr1.2:45685083-45685102 | MS.gene065711:intron | 20.0% |
| ! | AAAAATGAAAACGACGAAAA+CGG | + | chr1.2:45684710-45684729 | None:intergenic | 25.0% |
| ! | AAAGAAAAATGGTAAAATGG+TGG | - | chr1.2:45685347-45685366 | MS.gene065711:intron | 25.0% |
| ! | AAGAAAAATGGTAAAATGGT+GGG | - | chr1.2:45685348-45685367 | MS.gene065711:intron | 25.0% |
| ! | ACAGAGAAATACTTACATTA+TGG | + | chr1.2:45685966-45685985 | None:intergenic | 25.0% |
| ! | AGAGAAATACTTACATTATG+GGG | + | chr1.2:45685964-45685983 | None:intergenic | 25.0% |
| ! | ATATACTACAGATTTAAGCA+TGG | + | chr1.2:45685734-45685753 | None:intergenic | 25.0% |
| ! | ATCTTTATGATACATATGGA+TGG | - | chr1.2:45683761-45683780 | MS.gene065711:intron | 25.0% |
| ! | CAGAGAAATACTTACATTAT+GGG | + | chr1.2:45685965-45685984 | None:intergenic | 25.0% |
| ! | GATATGTACAAAATATTAGC+CGG | + | chr1.2:45685438-45685457 | None:intergenic | 25.0% |
| ! | TATACTACAGATTTAAGCAT+GGG | + | chr1.2:45685733-45685752 | None:intergenic | 25.0% |
| ! | TATGAATAGTATCATGTACA+TGG | + | chr1.2:45684352-45684371 | None:intergenic | 25.0% |
| ! | TTATATTGATGTCAAAGTGT+CGG | + | chr1.2:45685155-45685174 | None:intergenic | 25.0% |
| !! | AAAACTACATCGATGATTTT+AGG | + | chr1.2:45684813-45684832 | None:intergenic | 25.0% |
| !! | ATTGAAATGTTCGATCATTT+TGG | - | chr1.2:45685001-45685020 | MS.gene065711:intron | 25.0% |
| !! | GATTTTCTTGAAATTTGGAA+TGG | + | chr1.2:45684490-45684509 | None:intergenic | 25.0% |
| !! | TTTGGTATAAGAATTTTCGT+TGG | - | chr1.2:45683793-45683812 | MS.gene065711:CDS | 25.0% |
| !!! | TAAACTGGTTCTATCAAATT+AGG | + | chr1.2:45686080-45686099 | None:intergenic | 25.0% |
| !!! | TTTTTTTACCGATGGAATTT+TGG | - | chr1.2:45684881-45684900 | MS.gene065711:intron | 25.0% |
| AACATCTCAAAAAGACACAT+TGG | + | chr1.2:45683849-45683868 | None:intergenic | 30.0% | |
| AAGAGAACACCTAAAATTTG+GGG | + | chr1.2:45683626-45683645 | None:intergenic | 30.0% | |
| AATGAATGAATGTTACTGCA+AGG | - | chr1.2:45685189-45685208 | MS.gene065711:intron | 30.0% | |
| AGGTTGAACCAAAGAAATTT+GGG | - | chr1.2:45686905-45686924 | MS.gene065711:intron | 30.0% | |
| ATATTACGAACACCTAACAA+TGG | + | chr1.2:45686002-45686021 | None:intergenic | 30.0% | |
| ATTACAGAAAACTTGCACAA+AGG | + | chr1.2:45685387-45685406 | None:intergenic | 30.0% | |
| CAAGAGAACACCTAAAATTT+GGG | + | chr1.2:45683627-45683646 | None:intergenic | 30.0% | |
| CATGAACACTTCTTACTTAT+TGG | - | chr1.2:45686362-45686381 | MS.gene065711:intron | 30.0% | |
| GAGAAATACTTACATTATGG+GGG | + | chr1.2:45685963-45685982 | None:intergenic | 30.0% | |
| GATTACATCTCTGATAACAA+TGG | + | chr1.2:45686869-45686888 | None:intergenic | 30.0% | |
| TATCTGGAAATCTGAAAGTT+CGG | - | chr1.2:45686485-45686504 | MS.gene065711:intron | 30.0% | |
| TGATGTCTTGTGAATGTAAA+GGG | - | chr1.2:45685501-45685520 | MS.gene065711:intron | 30.0% | |
| TTGATGTCTTGTGAATGTAA+AGG | - | chr1.2:45685500-45685519 | MS.gene065711:intron | 30.0% | |
| TTGTTGATCTGACATAGTAT+TGG | - | chr1.2:45683906-45683925 | MS.gene065711:intron | 30.0% | |
| TTTGATAGAACCAGTTTATG+TGG | - | chr1.2:45686082-45686101 | MS.gene065711:intron | 30.0% | |
| ! | ATAGATTTTTCCGATCCAAT+AGG | - | chr1.2:45683694-45683713 | MS.gene065711:intron | 30.0% |
| ! | CACATATTTTTCCTTTGGTT+TGG | - | chr1.2:45683588-45683607 | MS.gene065711:intron | 30.0% |
| ! | CGCATAAACTACAATTTTCA+AGG | + | chr1.2:45686173-45686192 | None:intergenic | 30.0% |
| ! | GTCCATAAAGAAAAGTACAA+AGG | - | chr1.2:45684463-45684482 | MS.gene065711:intron | 30.0% |
| ! | GTCCTTTGTACTTTTCTTTA+TGG | + | chr1.2:45684468-45684487 | None:intergenic | 30.0% |
| ! | GTTGTCACATATTTTTCCTT+TGG | - | chr1.2:45683583-45683602 | MS.gene065711:intron | 30.0% |
| ! | TTGTACTTTTCTTTATGGAC+CGG | + | chr1.2:45684463-45684482 | None:intergenic | 30.0% |
| !! | ATACATATGGATGGATTTTG+AGG | - | chr1.2:45683770-45683789 | MS.gene065711:intron | 30.0% |
| !! | CAACTAGAGCTAATTTGTTA+AGG | - | chr1.2:45683670-45683689 | MS.gene065711:intron | 30.0% |
| !! | CTTAACAAATTAGCTCTAGT+TGG | + | chr1.2:45683672-45683691 | None:intergenic | 30.0% |
| !! | TATAAGAATTTTCGTTGGCT+AGG | - | chr1.2:45683798-45683817 | MS.gene065711:CDS | 30.0% |
| AATATGAACAAGGGGACTAA+GGG | + | chr1.2:45684044-45684063 | None:intergenic | 35.0% | |
| AATTTGGGCTTCTTGCAAAT+TGG | - | chr1.2:45686920-45686939 | MS.gene065711:intron | 35.0% | |
| ACATGTGACATCATCATGTT+GGG | - | chr1.2:45684381-45684400 | MS.gene065711:intron | 35.0% | |
| ACCCACTGATAATATGAACA+AGG | + | chr1.2:45684054-45684073 | None:intergenic | 35.0% | |
| ACTTGTGTTAACCATGAAAC+TGG | - | chr1.2:45686709-45686728 | MS.gene065711:intron | 35.0% | |
| AGAGAACACCTAAAATTTGG+GGG | + | chr1.2:45683625-45683644 | None:intergenic | 35.0% | |
| ATGAATGTTACTGCAAGGTT+CGG | - | chr1.2:45685194-45685213 | MS.gene065711:intron | 35.0% | |
| ATGCGAAATCCTAAAACTCA+AGG | + | chr1.2:45685627-45685646 | None:intergenic | 35.0% | |
| CAAGAACTCAAAAAACATGC+CGG | + | chr1.2:45686207-45686226 | None:intergenic | 35.0% | |
| CATATCATGTGTTTATCCTG+AGG | - | chr1.2:45685452-45685471 | MS.gene065711:intron | 35.0% | |
| CCAAGAGAACACCTAAAATT+TGG | + | chr1.2:45683628-45683647 | None:intergenic | 35.0% | |
| CCACTGATAATATGAACAAG+GGG | + | chr1.2:45684052-45684071 | None:intergenic | 35.0% | |
| CCCACTGATAATATGAACAA+GGG | + | chr1.2:45684053-45684072 | None:intergenic | 35.0% | |
| CCCTTGTTCATATTATCAGT+GGG | - | chr1.2:45684050-45684069 | MS.gene065711:intron | 35.0% | |
| CGTGGTTAAAATATGGAGAA+AGG | - | chr1.2:45685651-45685670 | MS.gene065711:intron | 35.0% | |
| CTTGGTTGCTTCTTCTTAAT+AGG | - | chr1.2:45683643-45683662 | MS.gene065711:intron | 35.0% | |
| TAAAAGTAAGTTCCTTCTGG+AGG | + | chr1.2:45687027-45687046 | None:intergenic | 35.0% | |
| TAATATGAACAAGGGGACTA+AGG | + | chr1.2:45684045-45684064 | None:intergenic | 35.0% | |
| TACTTTCAGACTGTACATGA+AGG | - | chr1.2:45686601-45686620 | MS.gene065711:intron | 35.0% | |
| TATCCAACTTCCACATAAAC+TGG | + | chr1.2:45686095-45686114 | None:intergenic | 35.0% | |
| TTGACAAATCCAGTTTCTTG+TGG | - | chr1.2:45683998-45684017 | MS.gene065711:intron | 35.0% | |
| TTTCAAATATGTACTGCCTC+AGG | + | chr1.2:45685471-45685490 | None:intergenic | 35.0% | |
| ! | ATCATTATGGGTTATCCAGA+TGG | + | chr1.2:45683937-45683956 | None:intergenic | 35.0% |
| ! | ATTCTGGTTGTTCTTGTTTC+CGG | - | chr1.2:45685416-45685435 | MS.gene065711:intron | 35.0% |
| ! | CAGGTTGAACCAAAGAAATT+TGG | - | chr1.2:45686904-45686923 | MS.gene065711:intron | 35.0% |
| ! | CCATCTAAAATCCAGCTAAA+GGG | + | chr1.2:45684214-45684233 | None:intergenic | 35.0% |
| ! | CTCTGATAACAATGGATTCA+AGG | + | chr1.2:45686861-45686880 | None:intergenic | 35.0% |
| ! | GAAGATGATATGAAAGCATG+TGG | + | chr1.2:45686755-45686774 | None:intergenic | 35.0% |
| ! | TCATTTTGTGCGTACTTAAC+AGG | - | chr1.2:45686542-45686561 | MS.gene065711:intron | 35.0% |
| ! | TCCATCTAAAATCCAGCTAA+AGG | + | chr1.2:45684215-45684234 | None:intergenic | 35.0% |
| ! | TTACCGATGGAATTTTGGAT+CGG | - | chr1.2:45684886-45684905 | MS.gene065711:intron | 35.0% |
| ! | TTCGAGCTGTGAATTTTGTT+CGG | - | chr1.2:45684919-45684938 | MS.gene065711:intron | 35.0% |
| ! | TTTATGCGAAGTGTTTACAC+CGG | - | chr1.2:45686185-45686204 | MS.gene065711:intron | 35.0% |
| !! | AAAGAAAATGGAGTGCTGAT+CGG | + | chr1.2:45684518-45684537 | None:intergenic | 35.0% |
| !! | AACACAATCTCTCTGCTTTT+TGG | - | chr1.2:45686829-45686848 | MS.gene065711:intron | 35.0% |
| !! | ATAGTGGGCCTAAAACAAAA+CGG | - | chr1.2:45684427-45684446 | MS.gene065711:intron | 35.0% |
| !! | CATCGATGATTTTAGGTCAA+CGG | + | chr1.2:45684806-45684825 | None:intergenic | 35.0% |
| !! | CCAAATTTTAGGTGTTCTCT+TGG | - | chr1.2:45683625-45683644 | MS.gene065711:intron | 35.0% |
| !! | CTAAAACAAAACGGGCTAAT+AGG | - | chr1.2:45684436-45684455 | MS.gene065711:intron | 35.0% |
| !! | TTGATAGGTCTTGTTTGAGT+GGG | - | chr1.2:45684123-45684142 | MS.gene065711:intron | 35.0% |
| !! | TTTTGTTGAAGTGAGTGTTG+TGG | + | chr1.2:45684622-45684641 | None:intergenic | 35.0% |
| !!! | AGATGTTTTTTGTCCTAGTC+GGG | - | chr1.2:45683862-45683881 | MS.gene065711:CDS | 35.0% |
| !!! | CTATTAGCCCGTTTTGTTTT+AGG | + | chr1.2:45684438-45684457 | None:intergenic | 35.0% |
| !!! | GAGATGTTTTTTGTCCTAGT+CGG | - | chr1.2:45683861-45683880 | MS.gene065711:CDS | 35.0% |
| !!! | GAGTTTTAGGATTTCGCATT+GGG | - | chr1.2:45685628-45685647 | MS.gene065711:intron | 35.0% |
| !!! | TATGGATGGATTTTGAGGTT+TGG | - | chr1.2:45683775-45683794 | MS.gene065711:CDS | 35.0% |
| !!! | TCTTGTGGTACTGGTTTTTT+AGG | - | chr1.2:45684013-45684032 | MS.gene065711:intron | 35.0% |
| !!! | TGAGTTTTAGGATTTCGCAT+TGG | - | chr1.2:45685627-45685646 | MS.gene065711:intron | 35.0% |
| !!! | TTGTTTTAGGCCCACTATTT+TGG | + | chr1.2:45684425-45684444 | None:intergenic | 35.0% |
| AAAACGGCGATGAGTTAGAT+TGG | + | chr1.2:45684694-45684713 | None:intergenic | 40.0% | |
| AAACCAGTACCACAAGAAAC+TGG | + | chr1.2:45684010-45684029 | None:intergenic | 40.0% | |
| AAAGCACAACGAGATCCTAT+TGG | + | chr1.2:45683712-45683731 | None:intergenic | 40.0% | |
| AATCCAGTTTCTTGTGGTAC+TGG | - | chr1.2:45684004-45684023 | MS.gene065711:intron | 40.0% | |
| ACAACGAGATCCTATTGGAT+CGG | + | chr1.2:45683707-45683726 | None:intergenic | 40.0% | |
| ACTTCTCTGCATCCATTGTT+AGG | - | chr1.2:45685987-45686006 | MS.gene065711:intron | 40.0% | |
| AGAACACCTAAAATTTGGGG+GGG | + | chr1.2:45683623-45683642 | None:intergenic | 40.0% | |
| ATGACATTTACATGCGCTCT+TGG | - | chr1.2:45685920-45685939 | MS.gene065711:intron | 40.0% | |
| CACATGTGACATCATCATGT+TGG | - | chr1.2:45684380-45684399 | MS.gene065711:intron | 40.0% | |
| CACTCAAACAAGACCTATCA+AGG | + | chr1.2:45684124-45684143 | None:intergenic | 40.0% | |
| CATGTGACATCATCATGTTG+GGG | - | chr1.2:45684382-45684401 | MS.gene065711:intron | 40.0% | |
| CATTGGGCGTGGTTAAAATA+TGG | - | chr1.2:45685644-45685663 | MS.gene065711:intron | 40.0% | |
| CCCCTTGTTCATATTATCAG+TGG | - | chr1.2:45684049-45684068 | MS.gene065711:intron | 40.0% | |
| CTGTATTTGCACATGAACAC+TGG | - | chr1.2:45686270-45686289 | MS.gene065711:intron | 40.0% | |
| GAAAAGAAGAACGCGAATTG+TGG | + | chr1.2:45684571-45684590 | None:intergenic | 40.0% | |
| GAACCAGTTTATGTGGAAGT+TGG | - | chr1.2:45686089-45686108 | MS.gene065711:intron | 40.0% | |
| GACTTCAGATGAAGAGCAAT+TGG | - | chr1.2:45683975-45683994 | MS.gene065711:intron | 40.0% | |
| GAGAACACCTAAAATTTGGG+GGG | + | chr1.2:45683624-45683643 | None:intergenic | 40.0% | |
| GAGTTGGAACCCAGTAAAAT+GGG | + | chr1.2:45683499-45683518 | None:intergenic | 40.0% | |
| GCAAGAAGCCCAAATTTCTT+TGG | + | chr1.2:45686916-45686935 | None:intergenic | 40.0% | |
| GTTAGCTATGGAATGGATGA+TGG | - | chr1.2:45685895-45685914 | MS.gene065711:intron | 40.0% | |
| TAAGCATGGGAGTAGTAACT+AGG | + | chr1.2:45685720-45685739 | None:intergenic | 40.0% | |
| TAGTGATACCTATCCCATGT+AGG | - | chr1.2:45684073-45684092 | MS.gene065711:intron | 40.0% | |
| TATCCGTACTTCAGAGTTTC+CGG | - | chr1.2:45685283-45685302 | MS.gene065711:intron | 40.0% | |
| TCACCGATCCAAAATTCCAT+CGG | + | chr1.2:45684892-45684911 | None:intergenic | 40.0% | |
| TCTTCTGTGTCTTAAGTCCA+TGG | - | chr1.2:45684166-45684185 | MS.gene065711:intron | 40.0% | |
| TGACAACTTAGACACCTTGT+CGG | + | chr1.2:45683570-45683589 | None:intergenic | 40.0% | |
| ! | AGCATGCATCCCATTTTACT+GGG | - | chr1.2:45683487-45683506 | MS.gene065711:CDS | 40.0% |
| ! | CCCTTTAGCTGGATTTTAGA+TGG | - | chr1.2:45684211-45684230 | MS.gene065711:intron | 40.0% |
| ! | GAACGAGGTGAAAAAGGTAT+TGG | - | chr1.2:45685862-45685881 | MS.gene065711:CDS | 40.0% |
| ! | GTACTTAACAGGTGGTTTTC+AGG | - | chr1.2:45686553-45686572 | MS.gene065711:intron | 40.0% |
| ! | TAGTGGGCCTAAAACAAAAC+GGG | - | chr1.2:45684428-45684447 | MS.gene065711:intron | 40.0% |
| ! | TATGTTCTGTTGCTTCAAGC+TGG | + | chr1.2:45686135-45686154 | None:intergenic | 40.0% |
| ! | TGCCATTTCTTTCTTCAGCT+GGG | + | chr1.2:45686977-45686996 | None:intergenic | 40.0% |
| ! | TGTTCTGGTCCTTGAGTTTT+AGG | - | chr1.2:45685615-45685634 | MS.gene065711:intron | 40.0% |
| ! | TTTTGTGCGTACTTAACAGG+TGG | - | chr1.2:45686545-45686564 | MS.gene065711:intron | 40.0% |
| !! | AAGAAAATGGAGTGCTGATC+GGG | + | chr1.2:45684517-45684536 | None:intergenic | 40.0% |
| !! | AGTCGATTTTCCCATTGTGT+GGG | - | chr1.2:45684096-45684115 | MS.gene065711:intron | 40.0% |
| !! | CTTGATAGGTCTTGTTTGAG+TGG | - | chr1.2:45684122-45684141 | MS.gene065711:intron | 40.0% |
| !! | GAGGTGTCGTTTGTTTGTTT+GGG | - | chr1.2:45683464-45683483 | MS.gene065711:CDS | 40.0% |
| !! | GGTGAAAAAGGTATTGGTGA+TGG | - | chr1.2:45685868-45685887 | MS.gene065711:CDS | 40.0% |
| !! | GTGTAGTTGGTGTTAGGATT+CGG | - | chr1.2:45685216-45685235 | MS.gene065711:intron | 40.0% |
| !! | TGATAGGTCTTGTTTGAGTG+GGG | - | chr1.2:45684124-45684143 | MS.gene065711:intron | 40.0% |
| !! | TGATCTGACATAGTATTGGC+TGG | - | chr1.2:45683910-45683929 | MS.gene065711:intron | 40.0% |
| !! | TTGAGAGTTGGTGCTGTTTA+GGG | - | chr1.2:45683821-45683840 | MS.gene065711:CDS | 40.0% |
| !!! | ATGTTTTTTGTCCTAGTCGG+GGG | - | chr1.2:45683864-45683883 | MS.gene065711:CDS | 40.0% |
| !!! | GATGTTTTTTGTCCTAGTCG+GGG | - | chr1.2:45683863-45683882 | MS.gene065711:CDS | 40.0% |
| AACACCTAAAATTTGGGGGG+GGG | + | chr1.2:45683621-45683640 | None:intergenic | 45.0% | |
| AAGGAACTTCAGATTGCTGG+AGG | - | chr1.2:45685834-45685853 | MS.gene065711:CDS | 45.0% | |
| AAGTACGAGTGCACTTGTTC+TGG | - | chr1.2:45685600-45685619 | MS.gene065711:intron | 45.0% | |
| AAGTGAAGCCTTCCAAGATC+AGG | + | chr1.2:45683521-45683540 | None:intergenic | 45.0% | |
| AGTCCATGGTAGAGTAAGAC+TGG | - | chr1.2:45684180-45684199 | MS.gene065711:intron | 45.0% | |
| AGTCGGGGGTAATATTAAGC+AGG | - | chr1.2:45683878-45683897 | MS.gene065711:CDS | 45.0% | |
| ATCTCGTTGTGCTTTCTACG+TGG | - | chr1.2:45683717-45683736 | MS.gene065711:intron | 45.0% | |
| ATGCGTGTCAGACACTTTGA+CGG | - | chr1.2:45685245-45685264 | MS.gene065711:intron | 45.0% | |
| ATTTACATGCGCTCTTGGAC+TGG | - | chr1.2:45685925-45685944 | MS.gene065711:intron | 45.0% | |
| CAAAATCCATCCATGACGCT+TGG | - | chr1.2:45684637-45684656 | MS.gene065711:CDS | 45.0% | |
| CATATGCCCTTCCTATGTTC+TGG | - | chr1.2:45686405-45686424 | MS.gene065711:intron | 45.0% | |
| CATCACACTTATCTCGTAGC+CGG | + | chr1.2:45685305-45685324 | None:intergenic | 45.0% | |
| CGTGAATGAAACCGAACACT+TGG | + | chr1.2:45686679-45686698 | None:intergenic | 45.0% | |
| CTTGGAAGGCTTCACTTGAT+GGG | - | chr1.2:45683524-45683543 | MS.gene065711:CDS | 45.0% | |
| GAACACCTAAAATTTGGGGG+GGG | + | chr1.2:45683622-45683641 | None:intergenic | 45.0% | |
| GAACCAGTCTTACTCTACCA+TGG | + | chr1.2:45684186-45684205 | None:intergenic | 45.0% | |
| GAATGAAACCGAACACTTGG+CGG | + | chr1.2:45686676-45686695 | None:intergenic | 45.0% | |
| GACCCAGCTGAAGAAAGAAA+TGG | - | chr1.2:45686972-45686991 | MS.gene065711:CDS | 45.0% | |
| GACTTAAGACACAGAAGACC+AGG | + | chr1.2:45684164-45684183 | None:intergenic | 45.0% | |
| GAGCTTGAACGAGGTGAAAA+AGG | - | chr1.2:45685856-45685875 | MS.gene065711:CDS | 45.0% | |
| GCTACGAGATAAGTGTGATG+AGG | - | chr1.2:45685305-45685324 | MS.gene065711:intron | 45.0% | |
| GCTCACAAGCAACTAAACAC+AGG | + | chr1.2:45686242-45686261 | None:intergenic | 45.0% | |
| GCTTAATATTACCCCCGACT+AGG | + | chr1.2:45683878-45683897 | None:intergenic | 45.0% | |
| GGAGTTGGAACCCAGTAAAA+TGG | + | chr1.2:45683500-45683519 | None:intergenic | 45.0% | |
| TACATTATGGGGGCCAATGA+TGG | + | chr1.2:45685953-45685972 | None:intergenic | 45.0% | |
| TCCAAGGAACTTCAGATTGC+TGG | - | chr1.2:45685831-45685850 | MS.gene065711:CDS | 45.0% | |
| TCTTGGAAGGCTTCACTTGA+TGG | - | chr1.2:45683523-45683542 | MS.gene065711:CDS | 45.0% | |
| TGGCACTGTTAGCTATGGAA+TGG | - | chr1.2:45685888-45685907 | MS.gene065711:intron | 45.0% | |
| TGGTTCATCATCCCTTTAGC+TGG | - | chr1.2:45684200-45684219 | MS.gene065711:intron | 45.0% | |
| TGTTAACCATGAAACTGGCG+TGG | - | chr1.2:45686714-45686733 | MS.gene065711:intron | 45.0% | |
| TTCCAACTCCTGATCTTGGA+AGG | - | chr1.2:45683510-45683529 | MS.gene065711:CDS | 45.0% | |
| ! | AATCGACTCCTACATGGGAT+AGG | + | chr1.2:45684084-45684103 | None:intergenic | 45.0% |
| ! | CTGCCATTTCTTTCTTCAGC+TGG | + | chr1.2:45686978-45686997 | None:intergenic | 45.0% |
| ! | CTTTCTACGTGGTGTCGAAA+AGG | - | chr1.2:45683728-45683747 | MS.gene065711:intron | 45.0% |
| ! | GAGCATGCATCCCATTTTAC+TGG | - | chr1.2:45683486-45683505 | MS.gene065711:CDS | 45.0% |
| ! | GGGAAAATCGACTCCTACAT+GGG | + | chr1.2:45684089-45684108 | None:intergenic | 45.0% |
| ! | GTGAGTGTTGTGGATCTGAT+CGG | + | chr1.2:45684612-45684631 | None:intergenic | 45.0% |
| ! | TCCAGCAATCTGAAGTTCCT+TGG | + | chr1.2:45685835-45685854 | None:intergenic | 45.0% |
| ! | TCGATTTTCCCATTGTGTGG+GGG | - | chr1.2:45684098-45684117 | MS.gene065711:intron | 45.0% |
| ! | TCTTGTTTGAGTGGGGTCTT+GGG | - | chr1.2:45684131-45684150 | MS.gene065711:intron | 45.0% |
| ! | TGGGAAAATCGACTCCTACA+TGG | + | chr1.2:45684090-45684109 | None:intergenic | 45.0% |
| ! | TTGGCAAAGAGAGTACAGCA+TGG | - | chr1.2:45686939-45686958 | MS.gene065711:CDS | 45.0% |
| !! | ACAAAACGGGCTAATAGGTC+CGG | - | chr1.2:45684441-45684460 | MS.gene065711:intron | 45.0% |
| !! | ATAGTATTGGCTGGTCCATC+TGG | - | chr1.2:45683919-45683938 | MS.gene065711:intron | 45.0% |
| !! | GAGTCGATTTTCCCATTGTG+TGG | - | chr1.2:45684095-45684114 | MS.gene065711:intron | 45.0% |
| !! | GGAGGTGTCGTTTGTTTGTT+TGG | - | chr1.2:45683463-45683482 | MS.gene065711:CDS | 45.0% |
| !! | GTCGATTTTCCCATTGTGTG+GGG | - | chr1.2:45684097-45684116 | MS.gene065711:intron | 45.0% |
| !! | GTTGAGAGTTGGTGCTGTTT+AGG | - | chr1.2:45683820-45683839 | MS.gene065711:CDS | 45.0% |
| !! | TAGCCGGAAACTCTGAAGTA+CGG | + | chr1.2:45685289-45685308 | None:intergenic | 45.0% |
| !! | TGAGAGTTGGTGCTGTTTAG+GGG | - | chr1.2:45683822-45683841 | MS.gene065711:CDS | 45.0% |
| AAATGGCAGCCCCTCATAAC+CGG | - | chr1.2:45686989-45687008 | MS.gene065711:CDS | 50.0% | |
| ACACCTAAAATTTGGGGGGG+GGG | + | chr1.2:45683620-45683639 | None:intergenic | 50.0% | |
| AGCCTTCCAAGATCAGGAGT+TGG | + | chr1.2:45683515-45683534 | None:intergenic | 50.0% | |
| ATGAACAAGGGGACTAAGGG+TGG | + | chr1.2:45684041-45684060 | None:intergenic | 50.0% | |
| ATGCCCTTCCTATGTTCTGG+CGG | - | chr1.2:45686408-45686427 | MS.gene065711:intron | 50.0% | |
| CAACTTAGACACCTTGTCGG+TGG | + | chr1.2:45683567-45683586 | None:intergenic | 50.0% | |
| CAGAAAAGCCGCCAAGTGTT+CGG | - | chr1.2:45686665-45686684 | MS.gene065711:intron | 50.0% | |
| CTGATACCACGCCAGTTTCA+TGG | + | chr1.2:45686723-45686742 | None:intergenic | 50.0% | |
| CTTGTTTGAGTGGGGTCTTG+GGG | - | chr1.2:45684132-45684151 | MS.gene065711:intron | 50.0% | |
| GAAAAGACCCGCCAGAACAT+AGG | + | chr1.2:45686419-45686438 | None:intergenic | 50.0% | |
| GACAAGCTTCCGGTTATGAG+GGG | + | chr1.2:45687001-45687020 | None:intergenic | 50.0% | |
| GGACAAGCTTCCGGTTATGA+GGG | + | chr1.2:45687002-45687021 | None:intergenic | 50.0% | |
| TATCAAGGCCCCCACACAAT+GGG | + | chr1.2:45684109-45684128 | None:intergenic | 50.0% | |
| TGCGCTTCAATGCAGTTCCA+AGG | - | chr1.2:45685815-45685834 | MS.gene065711:intron | 50.0% | |
| TGGACAAGCTTCCGGTTATG+AGG | + | chr1.2:45687003-45687022 | None:intergenic | 50.0% | |
| TGGGTTCCAACTCCTGATCT+TGG | - | chr1.2:45683506-45683525 | MS.gene065711:CDS | 50.0% | |
| TGGTAACTAACCGACGACAC+TGG | + | chr1.2:45684674-45684693 | None:intergenic | 50.0% | |
| TTAGGATTTCGCATTGGGCG+TGG | - | chr1.2:45685633-45685652 | MS.gene065711:intron | 50.0% | |
| TTGTTTGAGTGGGGTCTTGG+GGG | - | chr1.2:45684133-45684152 | MS.gene065711:intron | 50.0% | |
| ! | AGTAAGTTCCTTCTGGAGGC+TGG | + | chr1.2:45687023-45687042 | None:intergenic | 50.0% |
| ! | GAACACTTGGCGGCTTTTCT+GGG | + | chr1.2:45686666-45686685 | None:intergenic | 50.0% |
| ! | GCAAAGAGAGTACAGCATGG+AGG | - | chr1.2:45686942-45686961 | MS.gene065711:CDS | 50.0% |
| ! | GGTGATGGCACTGTTAGCTA+TGG | - | chr1.2:45685883-45685902 | MS.gene065711:CDS | 50.0% |
| ! | TCGTTGGCTAGGTTGAGAGT+TGG | - | chr1.2:45683809-45683828 | MS.gene065711:CDS | 50.0% |
| !! | ACTGCAAGGTTCGGTGTAGT+TGG | - | chr1.2:45685203-45685222 | MS.gene065711:intron | 50.0% |
| !! | GGTTCGGTGTAGTTGGTGTT+AGG | - | chr1.2:45685210-45685229 | MS.gene065711:intron | 50.0% |
| !! | GTCTTGTTTGAGTGGGGTCT+TGG | - | chr1.2:45684130-45684149 | MS.gene065711:intron | 50.0% |
| !! | TCTTGGACTGGCACCATCAT+TGG | - | chr1.2:45685937-45685956 | MS.gene065711:intron | 50.0% |
| AAGCTTGTCCAGCCTCCAGA+AGG | - | chr1.2:45687012-45687031 | MS.gene065711:CDS | 55.0% | |
| AGACCCGCCAGAACATAGGA+AGG | + | chr1.2:45686415-45686434 | None:intergenic | 55.0% | |
| CACCTAAAATTTGGGGGGGG+GGG | + | chr1.2:45683619-45683638 | None:intergenic | 55.0% | |
| CATTGTGTGGGGGCCTTGAT+AGG | - | chr1.2:45684108-45684127 | MS.gene065711:intron | 55.0% | |
| CTAACCGACGACACTGGATC+CGG | + | chr1.2:45684668-45684687 | None:intergenic | 55.0% | |
| CTATCAAGGCCCCCACACAA+TGG | + | chr1.2:45684110-45684129 | None:intergenic | 55.0% | |
| GACCCGCCAGAACATAGGAA+GGG | + | chr1.2:45686414-45686433 | None:intergenic | 55.0% | |
| GGCTTCACTTGATGGGATGC+CGG | - | chr1.2:45683531-45683550 | MS.gene065711:CDS | 55.0% | |
| TGATGGGATGCCGGTCTCTA+GGG | - | chr1.2:45683540-45683559 | MS.gene065711:CDS | 55.0% | |
| TGCCCTTCCTATGTTCTGGC+GGG | - | chr1.2:45686409-45686428 | MS.gene065711:intron | 55.0% | |
| TTGATGGGATGCCGGTCTCT+AGG | - | chr1.2:45683539-45683558 | MS.gene065711:CDS | 55.0% | |
| TTGCTGGAGGAGCTTGAACG+AGG | - | chr1.2:45685847-45685866 | MS.gene065711:CDS | 55.0% | |
| ! | CGAACACTTGGCGGCTTTTC+TGG | + | chr1.2:45686667-45686686 | None:intergenic | 55.0% |
| CTGGAGGCTGGACAAGCTTC+CGG | + | chr1.2:45687011-45687030 | None:intergenic | 60.0% | |
| GATGGGATGCCGGTCTCTAG+GGG | - | chr1.2:45683541-45683560 | MS.gene065711:CDS | 60.0% | |
| GCTGAGCCAAGCGTCATGGA+TGG | + | chr1.2:45684646-45684665 | None:intergenic | 60.0% | |
| GGGGGGCTCTTCCAAACCAA+AGG | + | chr1.2:45683602-45683621 | None:intergenic | 60.0% | |
| TCAGCCGGATCCAGTGTCGT+CGG | - | chr1.2:45684661-45684680 | MS.gene065711:intron | 60.0% | |
| TCCATGACGCTTGGCTCAGC+CGG | - | chr1.2:45684646-45684665 | MS.gene065711:CDS | 60.0% | |
| ! | AGCCCCCCCCCCCAAATTTT+AGG | - | chr1.2:45683614-45683633 | MS.gene065711:intron | 60.0% |
| GGGGTCTTGGGGGTTTGTCC+TGG | - | chr1.2:45684143-45684162 | MS.gene065711:intron | 65.0% | |
| TCCGGCTGAGCCAAGCGTCA+TGG | + | chr1.2:45684650-45684669 | None:intergenic | 65.0% | |
| TGTCGGTGGCCCCTAGAGAC+CGG | + | chr1.2:45683553-45683572 | None:intergenic | 65.0% | |
| ! | GTCTCTAGGGGCCACCGACA+AGG | - | chr1.2:45683553-45683572 | MS.gene065711:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 45683461 | 45687047 | 45683461 | ID=MS.gene065711 |
| chr1.2 | mRNA | 45683461 | 45687047 | 45683461 | ID=MS.gene065711.t1;Parent=MS.gene065711 |
| chr1.2 | exon | 45686934 | 45687047 | 45686934 | ID=MS.gene065711.t1.exon1;Parent=MS.gene065711.t1 |
| chr1.2 | CDS | 45686934 | 45687047 | 45686934 | ID=cds.MS.gene065711.t1;Parent=MS.gene065711.t1 |
| chr1.2 | exon | 45685826 | 45685904 | 45685826 | ID=MS.gene065711.t1.exon2;Parent=MS.gene065711.t1 |
| chr1.2 | CDS | 45685826 | 45685904 | 45685826 | ID=cds.MS.gene065711.t1;Parent=MS.gene065711.t1 |
| chr1.2 | exon | 45684539 | 45684678 | 45684539 | ID=MS.gene065711.t1.exon3;Parent=MS.gene065711.t1 |
| chr1.2 | CDS | 45684539 | 45684678 | 45684539 | ID=cds.MS.gene065711.t1;Parent=MS.gene065711.t1 |
| chr1.2 | exon | 45683773 | 45683898 | 45683773 | ID=MS.gene065711.t1.exon4;Parent=MS.gene065711.t1 |
| chr1.2 | CDS | 45683773 | 45683898 | 45683773 | ID=cds.MS.gene065711.t1;Parent=MS.gene065711.t1 |
| chr1.2 | exon | 45683461 | 45683601 | 45683461 | ID=MS.gene065711.t1.exon5;Parent=MS.gene065711.t1 |
| chr1.2 | CDS | 45683461 | 45683601 | 45683461 | ID=cds.MS.gene065711.t1;Parent=MS.gene065711.t1 |
| Gene Sequence |
| Protein sequence |
