Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067087.t1 | XP_003601902.1 | 99 | 399 | 4 | 0 | 1 | 399 | 1 | 399 | 4.20E-240 | 840.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067087.t1 | G7J360 | 99.0 | 399 | 4 | 0 | 1 | 399 | 1 | 399 | 3.0e-240 | 840.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene067087 | 0.812464 | 4.18E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene067087 | 0.843256 | 1.57E-58 | -1.69E-46 |
| MS.gene049283 | MS.gene067087 | 0.829745 | 4.33E-55 | -1.69E-46 |
| MS.gene049499 | MS.gene067087 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene067087 | 0.810452 | 1.14E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene067087 | 0.820522 | 6.56E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene067087 | 0.814365 | 1.60E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene067087 | 0.817173 | 3.78E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene067087 | 0.808236 | 3.42E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene067087 | 0.801601 | 8.34E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene067087 | 0.831683 | 1.45E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene067087 | 0.856801 | 2.52E-62 | -1.69E-46 |
| MS.gene052533 | MS.gene067087 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene052534 | MS.gene067087 | 0.81081 | 9.58E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene067087 | 0.807329 | 5.33E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene067087 | 0.815601 | 8.50E-52 | -1.69E-46 |
| MS.gene052717 | MS.gene067087 | 0.828838 | 7.20E-55 | -1.69E-46 |
| MS.gene052775 | MS.gene067087 | 0.801175 | 1.02E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene067087 | 0.804612 | 1.99E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene067087 | 0.841743 | 3.95E-58 | -1.69E-46 |
| MS.gene053272 | MS.gene067087 | -0.839665 | 1.38E-57 | -1.69E-46 |
| MS.gene053931 | MS.gene067087 | 0.812863 | 3.42E-51 | -1.69E-46 |
| MS.gene054576 | MS.gene067087 | 0.809549 | 1.79E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene067087 | 0.821478 | 3.95E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene067087 | 0.832085 | 1.16E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene067087 | 0.83122 | 1.89E-55 | -1.69E-46 |
| MS.gene054957 | MS.gene067087 | 0.827267 | 1.72E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene067087 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene067087 | 0.814369 | 1.60E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene067087 | 0.819356 | 1.21E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene067087 | 0.814461 | 1.52E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene067087 | 0.822823 | 1.93E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene067087 | 0.866756 | 2.26E-65 | -1.69E-46 |
| MS.gene05689 | MS.gene067087 | 0.807001 | 6.25E-50 | -1.69E-46 |
| MS.gene05690 | MS.gene067087 | 0.817894 | 2.60E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene067087 | 0.814585 | 1.43E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene067087 | 0.821917 | 3.13E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene067087 | 0.835179 | 1.95E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene067087 | 0.850908 | 1.25E-60 | -1.69E-46 |
| MS.gene057611 | MS.gene067087 | 0.816421 | 5.58E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene067087 | 0.801178 | 1.02E-48 | -1.69E-46 |
| MS.gene058095 | MS.gene067087 | 0.821526 | 3.85E-53 | -1.69E-46 |
| MS.gene058781 | MS.gene067087 | 0.827735 | 1.33E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene067087 | 0.81738 | 3.40E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene067087 | 0.80543 | 1.34E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene067087 | 0.820682 | 6.03E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene067087 | -0.865384 | 6.14E-65 | -1.69E-46 |
| MS.gene059935 | MS.gene067087 | 0.815754 | 7.86E-52 | -1.69E-46 |
| MS.gene060258 | MS.gene067087 | 0.818634 | 1.77E-52 | -1.69E-46 |
| MS.gene060338 | MS.gene067087 | 0.810314 | 1.23E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene067087 | 0.829096 | 6.23E-55 | -1.69E-46 |
| MS.gene060716 | MS.gene067087 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene067087 | 0.826861 | 2.15E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene067087 | 0.83922 | 1.80E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene067087 | 0.842279 | 2.85E-58 | -1.69E-46 |
| MS.gene061160 | MS.gene067087 | 0.801663 | 8.10E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene067087 | 0.827809 | 1.27E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067087.t1 | MTR_3g086610 | 98.997 | 399 | 4 | 0 | 1 | 399 | 1 | 399 | 0.0 | 823 |
| MS.gene067087.t1 | MTR_3g086610 | 99.171 | 362 | 3 | 0 | 1 | 362 | 1 | 362 | 0.0 | 746 |
| MS.gene067087.t1 | MTR_8g089815 | 78.589 | 397 | 83 | 2 | 1 | 397 | 1 | 395 | 0.0 | 669 |
| MS.gene067087.t1 | MTR_8g089820 | 72.519 | 393 | 103 | 2 | 7 | 399 | 2 | 389 | 0.0 | 580 |
| MS.gene067087.t1 | MTR_7g033300 | 71.618 | 377 | 100 | 2 | 17 | 386 | 1 | 377 | 0.0 | 565 |
| MS.gene067087.t1 | MTR_2g094650 | 65.026 | 386 | 129 | 3 | 1 | 385 | 1 | 381 | 0.0 | 539 |
| MS.gene067087.t1 | MTR_2g094650 | 64.858 | 387 | 129 | 4 | 1 | 385 | 1 | 382 | 0.0 | 535 |
| MS.gene067087.t1 | MTR_4g058800 | 68.219 | 365 | 113 | 3 | 25 | 386 | 1 | 365 | 0.0 | 528 |
| MS.gene067087.t1 | MTR_2g012570 | 51.504 | 266 | 118 | 7 | 102 | 356 | 78 | 343 | 1.46e-88 | 272 |
| MS.gene067087.t1 | MTR_2g012570 | 51.504 | 266 | 118 | 7 | 102 | 356 | 52 | 317 | 1.66e-88 | 271 |
| MS.gene067087.t1 | MTR_2g012570 | 51.504 | 266 | 118 | 7 | 102 | 356 | 52 | 317 | 1.03e-87 | 271 |
| MS.gene067087.t1 | MTR_2g012570 | 51.504 | 266 | 118 | 7 | 102 | 356 | 78 | 343 | 1.12e-87 | 271 |
| MS.gene067087.t1 | MTR_1g078290 | 47.687 | 281 | 134 | 6 | 98 | 365 | 75 | 355 | 1.47e-83 | 260 |
| MS.gene067087.t1 | MTR_1g078290 | 45.902 | 305 | 143 | 7 | 98 | 380 | 75 | 379 | 4.77e-83 | 259 |
| MS.gene067087.t1 | MTR_1g078290 | 47.687 | 281 | 134 | 6 | 98 | 365 | 75 | 355 | 7.94e-83 | 259 |
| MS.gene067087.t1 | MTR_4g090465 | 50.996 | 251 | 116 | 6 | 104 | 347 | 430 | 680 | 2.13e-81 | 264 |
| MS.gene067087.t1 | MTR_2g005330 | 45.552 | 281 | 145 | 6 | 82 | 354 | 60 | 340 | 3.14e-81 | 253 |
| MS.gene067087.t1 | MTR_2g005330 | 45.714 | 280 | 144 | 6 | 82 | 353 | 60 | 339 | 1.60e-80 | 253 |
| MS.gene067087.t1 | MTR_1g078290 | 48.760 | 242 | 112 | 5 | 98 | 327 | 75 | 316 | 1.90e-75 | 237 |
| MS.gene067087.t1 | MTR_2g005330 | 52.792 | 197 | 88 | 4 | 162 | 353 | 1 | 197 | 4.73e-67 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067087.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene067087.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene067087.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 1 | 385 | 0.0 | 610 |
| MS.gene067087.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene067087.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene067087.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene067087.t1 | AT1G67850 | 75.000 | 388 | 88 | 2 | 17 | 398 | 17 | 401 | 0.0 | 610 |
| MS.gene067087.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 600 |
| MS.gene067087.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 600 |
| MS.gene067087.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 600 |
| MS.gene067087.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 600 |
| MS.gene067087.t1 | AT3G27470 | 70.812 | 394 | 105 | 3 | 11 | 395 | 2 | 394 | 0.0 | 599 |
| MS.gene067087.t1 | AT1G13000 | 66.080 | 398 | 125 | 3 | 6 | 399 | 10 | 401 | 0.0 | 575 |
| MS.gene067087.t1 | AT1G13000 | 66.080 | 398 | 125 | 3 | 6 | 399 | 10 | 401 | 0.0 | 575 |
| MS.gene067087.t1 | AT1G13000 | 66.080 | 398 | 125 | 3 | 6 | 399 | 10 | 401 | 0.0 | 575 |
| MS.gene067087.t1 | AT1G13000 | 66.080 | 398 | 125 | 3 | 6 | 399 | 10 | 401 | 0.0 | 575 |
| MS.gene067087.t1 | AT2G28310 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| MS.gene067087.t1 | AT2G28310 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| MS.gene067087.t1 | AT2G28310 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| MS.gene067087.t1 | AT1G08040 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| MS.gene067087.t1 | AT1G08040 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| MS.gene067087.t1 | AT1G08040 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| MS.gene067087.t1 | AT1G08040 | 70.619 | 388 | 98 | 4 | 1 | 387 | 1 | 373 | 0.0 | 561 |
| MS.gene067087.t1 | AT3G26440 | 66.667 | 393 | 122 | 4 | 6 | 397 | 33 | 417 | 0.0 | 560 |
| MS.gene067087.t1 | AT3G26440 | 66.667 | 393 | 122 | 4 | 6 | 397 | 33 | 417 | 0.0 | 560 |
| MS.gene067087.t1 | AT3G26440 | 66.667 | 393 | 122 | 4 | 6 | 397 | 10 | 394 | 0.0 | 558 |
| MS.gene067087.t1 | AT3G26440 | 66.667 | 393 | 122 | 4 | 6 | 397 | 10 | 394 | 0.0 | 558 |
| MS.gene067087.t1 | AT3G26440 | 64.721 | 394 | 104 | 5 | 6 | 397 | 10 | 370 | 0.0 | 531 |
| MS.gene067087.t1 | AT3G26440 | 67.493 | 363 | 110 | 3 | 6 | 367 | 10 | 365 | 0.0 | 523 |
| MS.gene067087.t1 | AT1G24570 | 65.013 | 383 | 116 | 4 | 17 | 397 | 19 | 385 | 0.0 | 516 |
| MS.gene067087.t1 | AT1G24570 | 62.924 | 383 | 117 | 5 | 17 | 397 | 19 | 378 | 1.26e-174 | 492 |
| MS.gene067087.t1 | AT1G13000 | 66.871 | 326 | 103 | 2 | 6 | 327 | 10 | 334 | 1.23e-168 | 475 |
| MS.gene067087.t1 | AT4G12840 | 52.045 | 269 | 116 | 8 | 98 | 356 | 76 | 341 | 4.09e-91 | 280 |
| MS.gene067087.t1 | AT4G12840 | 52.045 | 269 | 116 | 8 | 98 | 356 | 76 | 341 | 5.90e-91 | 280 |
| MS.gene067087.t1 | AT1G11170 | 48.540 | 274 | 132 | 6 | 102 | 366 | 83 | 356 | 8.22e-84 | 260 |
| MS.gene067087.t1 | AT4G12840 | 52.000 | 250 | 107 | 8 | 117 | 356 | 1 | 247 | 1.16e-83 | 258 |
| MS.gene067087.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 13 | 285 | 1.17e-83 | 259 |
| MS.gene067087.t1 | AT1G11170 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.26e-83 | 261 |
| MS.gene067087.t1 | AT1G11170 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.26e-83 | 261 |
| MS.gene067087.t1 | AT1G11170 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.26e-83 | 261 |
| MS.gene067087.t1 | AT1G11170 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.26e-83 | 261 |
| MS.gene067087.t1 | AT1G11170 | 50.588 | 255 | 117 | 6 | 102 | 347 | 83 | 337 | 7.14e-83 | 257 |
| MS.gene067087.t1 | AT1G11170 | 50.588 | 255 | 117 | 6 | 102 | 347 | 83 | 337 | 7.14e-83 | 257 |
| MS.gene067087.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene067087.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene067087.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene067087.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene067087.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene067087.t1 | AT1G61240 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.48e-83 | 259 |
| MS.gene067087.t1 | AT1G61240 | 48.889 | 270 | 129 | 6 | 102 | 362 | 80 | 349 | 1.54e-82 | 257 |
| MS.gene067087.t1 | AT4G18530 | 47.170 | 265 | 122 | 7 | 96 | 347 | 69 | 328 | 1.27e-80 | 253 |
| MS.gene067087.t1 | AT4G18530 | 47.170 | 265 | 122 | 7 | 96 | 347 | 64 | 323 | 1.55e-80 | 253 |
| MS.gene067087.t1 | AT1G11170 | 51.082 | 231 | 105 | 5 | 102 | 324 | 83 | 313 | 2.37e-74 | 235 |
| MS.gene067087.t1 | AT4G18530 | 46.473 | 241 | 112 | 6 | 96 | 324 | 69 | 304 | 5.95e-72 | 228 |
| MS.gene067087.t1 | AT2G25905 | 48.485 | 231 | 96 | 5 | 17 | 246 | 19 | 227 | 3.27e-64 | 205 |
| MS.gene067087.t1 | AT1G11170 | 51.786 | 168 | 76 | 3 | 104 | 266 | 85 | 252 | 5.09e-52 | 174 |
Find 109 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATGACTATATATTTATA+TGG | 0.213074 | 3.4:+80676969 | MS.gene067087:CDS |
| TTGCCATGTCAACCCTTTAT+TGG | 0.257735 | 3.4:-80677170 | None:intergenic |
| ACGCTGCACAAGGAGGTAAA+TGG | 0.258388 | 3.4:-80677362 | None:intergenic |
| CCCCTGCCATGGTGCTTTCC+CGG | 0.260665 | 3.4:-80678048 | None:intergenic |
| TCTGCTCCTCTTGGATTTGA+TGG | 0.289728 | 3.4:-80676283 | None:intergenic |
| TGCCATGTCAACCCTTTATT+GGG | 0.303558 | 3.4:-80677169 | None:intergenic |
| CCTGGTTTAGAACCCAATAA+AGG | 0.308435 | 3.4:+80677157 | MS.gene067087:CDS |
| TTGTGTCTGGCATATGATTC+AGG | 0.313499 | 3.4:+80677518 | MS.gene067087:CDS |
| ATGCAGGTTTGTTGAGATTA+TGG | 0.320597 | 3.4:+80677467 | MS.gene067087:intron |
| GGCAGGTGAGGGAGAGATGT+AGG | 0.349851 | 3.4:+80678223 | MS.gene067087:intron |
| CGCTGCACAAGGAGGTAAAT+GGG | 0.354183 | 3.4:-80677361 | None:intergenic |
| TATTGATGCAGCCGTGAAAA+AGG | 0.363474 | 3.4:+80676551 | MS.gene067087:CDS |
| ATCCTTCTATTTCATTATGA+TGG | 0.372976 | 3.4:+80676675 | MS.gene067087:CDS |
| TTGCAGGGTAAAACTGAAAC+CGG | 0.384720 | 3.4:+80678029 | MS.gene067087:intron |
| GGTAAACTTTCTGCTCCTCT+TGG | 0.388659 | 3.4:-80676292 | None:intergenic |
| GGCCATCATAATGAAATAGA+AGG | 0.390690 | 3.4:-80676677 | None:intergenic |
| GAGAAGCATGGCGTTGTGTC+TGG | 0.390721 | 3.4:+80677505 | MS.gene067087:CDS |
| CATGCTTCTCGCGAGAATAC+TGG | 0.396635 | 3.4:-80677492 | None:intergenic |
| CAAGTGCAGGTACTTAAAAC+TGG | 0.397978 | 3.4:+80677105 | MS.gene067087:intron |
| GTGCTCGCAAACAGACTAAA+TGG | 0.402665 | 3.4:+80676751 | MS.gene067087:CDS |
| AATAAGCCTCATAATTTCAC+TGG | 0.409734 | 3.4:-80675736 | None:intergenic |
| TTGCAGTTCAATCTCCCATC+TGG | 0.411688 | 3.4:+80675945 | MS.gene067087:intron |
| GTGTCATTTGATAAGTGATT+TGG | 0.412581 | 3.4:-80676062 | None:intergenic |
| TAGAGTGACGGAGGAGAAAC+CGG | 0.412831 | 3.4:+80677323 | MS.gene067087:intron |
| AACCGGGAAAGCACCATGGC+AGG | 0.417235 | 3.4:+80678046 | MS.gene067087:CDS |
| TGTTCCCACACTAGGAAATC+AGG | 0.418886 | 3.4:+80677912 | MS.gene067087:CDS |
| TTTATTGGATGCAGTCCTAA+TGG | 0.423254 | 3.4:+80675705 | MS.gene067087:intron |
| CTGGTTTAGAACCCAATAAA+GGG | 0.442489 | 3.4:+80677158 | MS.gene067087:CDS |
| ATTTATATGGGATGAAGACT+TGG | 0.443996 | 3.4:+80676982 | MS.gene067087:CDS |
| TACATTGAAGAAAGATATAC+AGG | 0.451027 | 3.4:+80675993 | MS.gene067087:CDS |
| CATATAAATATATAGTCATA+TGG | 0.467190 | 3.4:-80676968 | None:intergenic |
| TCATATGGTGCCACAATGTC+AGG | 0.467804 | 3.4:-80676953 | None:intergenic |
| CTTGGCATTGCAGAATGACT+TGG | 0.475324 | 3.4:+80677633 | MS.gene067087:intron |
| TTGGAGTTGTCGATGCTCAA+TGG | 0.480149 | 3.4:+80677875 | MS.gene067087:CDS |
| TAGCCTGCACATGAGAAGAT+TGG | 0.483409 | 3.4:+80677856 | MS.gene067087:intron |
| GTGAAGGTCACAAGGTACTT+TGG | 0.484389 | 3.4:-80676504 | None:intergenic |
| ACCGGGAAAGCACCATGGCA+GGG | 0.486609 | 3.4:+80678047 | MS.gene067087:CDS |
| GAAAACCCAGTGAAATTATG+AGG | 0.490987 | 3.4:+80675730 | MS.gene067087:CDS |
| CCGGGAAAGCACCATGGCAG+GGG | 0.491082 | 3.4:+80678048 | MS.gene067087:CDS |
| ACTGGTGAAGAAGCATGGCC+TGG | 0.491574 | 3.4:+80677123 | MS.gene067087:CDS |
| CGACTCAGCTTCAACAATGC+CGG | 0.491664 | 3.4:-80676317 | None:intergenic |
| GGCCTGGAGATTTCACAGCC+TGG | 0.496813 | 3.4:+80677139 | MS.gene067087:CDS |
| ATGATGGCCGAGCTAATGAA+TGG | 0.499945 | 3.4:+80676691 | MS.gene067087:CDS |
| CCTTTATTGGGTTCTAAACC+AGG | 0.501314 | 3.4:-80677157 | None:intergenic |
| GATATACAGGCCGTCGTGCT+TGG | 0.507431 | 3.4:+80676006 | MS.gene067087:CDS |
| GACTCAGCTTCAACAATGCC+GGG | 0.509378 | 3.4:-80676316 | None:intergenic |
| GGTGAGGGAGAGATGTAGGA+AGG | 0.509559 | 3.4:+80678227 | MS.gene067087:intron |
| ATTAATATGTCTAATTCCAC+TGG | 0.509862 | 3.4:+80678315 | MS.gene067087:CDS |
| TCTTAAGATACACACCTCAC+TGG | 0.511552 | 3.4:-80676371 | None:intergenic |
| GAACATGCATATTTCAAGTC+CGG | 0.512196 | 3.4:+80678285 | MS.gene067087:CDS |
| ACTCCAATCTTCTCATGTGC+AGG | 0.516783 | 3.4:-80677859 | None:intergenic |
| ATATGACTATATATTTATAT+GGG | 0.518689 | 3.4:+80676970 | MS.gene067087:CDS |
| CGGCATTGTTGAAGCTGAGT+CGG | 0.519485 | 3.4:+80676318 | MS.gene067087:CDS |
| AATGACTTGGTCCATGGATG+GGG | 0.521935 | 3.4:+80677646 | MS.gene067087:CDS |
| TTTACCTGATTTCCTAGTGT+GGG | 0.526887 | 3.4:-80677916 | None:intergenic |
| AACCAGGCTGTGAAATCTCC+AGG | 0.532638 | 3.4:-80677141 | None:intergenic |
| CTTAAGATACACACCTCACT+GGG | 0.536039 | 3.4:-80676370 | None:intergenic |
| CAAAATCAAGTCCCCATCCA+TGG | 0.537352 | 3.4:-80677657 | None:intergenic |
| TCCAACATTGTCATTAACAA+AGG | 0.539794 | 3.4:+80675809 | MS.gene067087:CDS |
| GCATATTTCAAGTCCGGCGG+TGG | 0.544222 | 3.4:+80678291 | MS.gene067087:CDS |
| ATTTACCTGATTTCCTAGTG+TGG | 0.551215 | 3.4:-80677917 | None:intergenic |
| GGGAGAGATGTAGGAAGGAG+TGG | 0.553738 | 3.4:+80678232 | MS.gene067087:CDS |
| ACCTTTGTTAATGACAATGT+TGG | 0.557482 | 3.4:-80675810 | None:intergenic |
| GAATGACTTGGTCCATGGAT+GGG | 0.558080 | 3.4:+80677645 | MS.gene067087:intron |
| TTGCAGAATGACTTGGTCCA+TGG | 0.561994 | 3.4:+80677640 | MS.gene067087:intron |
| TGCAGTTAGAAGATGTGTTG+AGG | 0.565260 | 3.4:+80677678 | MS.gene067087:CDS |
| TCGAGGGAAGCAAGCCAGAT+GGG | 0.567592 | 3.4:-80675959 | None:intergenic |
| AAATGGGGACCGTTACTCGC+AGG | 0.570066 | 3.4:+80675580 | None:intergenic |
| CACCAAGGTGTTCCCACACT+AGG | 0.571590 | 3.4:+80677904 | MS.gene067087:CDS |
| TGAGTTTGAATGGTCAAAGA+AGG | 0.573343 | 3.4:+80676716 | MS.gene067087:CDS |
| CAGTATTCTCGCGAGAAGCA+TGG | 0.573602 | 3.4:+80677493 | MS.gene067087:CDS |
| AGAATGACTTGGTCCATGGA+TGG | 0.574042 | 3.4:+80677644 | MS.gene067087:intron |
| TACCTTGTGACCTTCACTGT+TGG | 0.581078 | 3.4:+80676510 | MS.gene067087:CDS |
| ACTCATCCCATTCATTAGCT+CGG | 0.581632 | 3.4:-80676698 | None:intergenic |
| ATGAATGGGATGAGTTTGAA+TGG | 0.582732 | 3.4:+80676706 | MS.gene067087:CDS |
| CATTTCATAGCCAACAGTGA+AGG | 0.584725 | 3.4:-80676520 | None:intergenic |
| ATCGAGGGAAGCAAGCCAGA+TGG | 0.584820 | 3.4:-80675960 | None:intergenic |
| TTTATATGGGATGAAGACTT+GGG | 0.588977 | 3.4:+80676983 | MS.gene067087:CDS |
| ATAAGCCTCATAATTTCACT+GGG | 0.590143 | 3.4:-80675735 | None:intergenic |
| AGAGTGACGGAGGAGAAACC+GGG | 0.592731 | 3.4:+80677324 | MS.gene067087:intron |
| ATTATCAGACCTGCGAGTAA+CGG | 0.593281 | 3.4:-80675589 | None:intergenic |
| GGAGCAGAAAGTTTACCTCC+CGG | 0.596329 | 3.4:+80676298 | MS.gene067087:CDS |
| CGCTAACCGACTCTGAAACA+TGG | 0.596779 | 3.4:-80678256 | None:intergenic |
| TTAAAACTGGTGAAGAAGCA+TGG | 0.599811 | 3.4:+80677118 | MS.gene067087:CDS |
| AGCCAACAGTGAAGGTCACA+AGG | 0.602730 | 3.4:-80676512 | None:intergenic |
| CGGGAAAGCACCATGGCAGG+GGG | 0.604779 | 3.4:+80678049 | MS.gene067087:CDS |
| AGTGGACCATGTTTCAGAGT+CGG | 0.607117 | 3.4:+80678250 | MS.gene067087:CDS |
| CTTATCAAATGACACATCAA+AGG | 0.609949 | 3.4:+80676070 | MS.gene067087:CDS |
| AACCCAATAAAGGGTTGACA+TGG | 0.618140 | 3.4:+80677167 | MS.gene067087:CDS |
| ATTTCTGCATCCTGACATTG+TGG | 0.619915 | 3.4:+80676943 | MS.gene067087:CDS |
| AGACATATTAATACCACCGC+CGG | 0.622372 | 3.4:-80678304 | None:intergenic |
| TGATGGCCGAGCTAATGAAT+GGG | 0.623524 | 3.4:+80676692 | MS.gene067087:CDS |
| GCTGCACAAGGAGGTAAATG+GGG | 0.631284 | 3.4:-80677360 | None:intergenic |
| GCAGTTACTTACGCTGCACA+AGG | 0.640937 | 3.4:-80677372 | None:intergenic |
| AATGTAAGAGAGATCAATCG+AGG | 0.643208 | 3.4:-80675976 | None:intergenic |
| CTGAAACCGGGAAAGCACCA+TGG | 0.651275 | 3.4:+80678042 | MS.gene067087:CDS |
| TGCAGGGTAAAACTGAAACC+GGG | 0.654503 | 3.4:+80678030 | MS.gene067087:intron |
| TTCCTAGTGTGGGAACACCT+TGG | 0.656990 | 3.4:-80677906 | None:intergenic |
| GTTTCGTCTCTAATGACCAG+TGG | 0.659639 | 3.4:-80678331 | None:intergenic |
| ATGTAAGAGAGATCAATCGA+GGG | 0.669290 | 3.4:-80675975 | None:intergenic |
| CATGCATATTTCAAGTCCGG+CGG | 0.674373 | 3.4:+80678288 | MS.gene067087:CDS |
| TGACGGAGGAGAAACCGGGA+TGG | 0.686924 | 3.4:+80677328 | MS.gene067087:CDS |
| CTGCACAAGGAGGTAAATGG+GGG | 0.692874 | 3.4:-80677359 | None:intergenic |
| ATTGTGGGGCAAACCCAGTG+AGG | 0.712457 | 3.4:+80676357 | MS.gene067087:CDS |
| TGGGTTCCATCAAATCCAAG+AGG | 0.719624 | 3.4:+80676277 | MS.gene067087:CDS |
| GCTCAATGGATTGTTCACCA+AGG | 0.733701 | 3.4:+80677889 | MS.gene067087:CDS |
| GTTACTTACGCTGCACAAGG+AGG | 0.742418 | 3.4:-80677369 | None:intergenic |
| TTATAAAAGACCAAGCACGA+CGG | 0.744122 | 3.4:-80676016 | None:intergenic |
| TCAGCTTCAACAATGCCGGG+AGG | 0.767152 | 3.4:-80676313 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGACTATATATTTATAT+GGG | + | chr3.4:80676970-80676989 | MS.gene067087:CDS | 10.0% |
| !! | TTTAGTAAATTTATTAAGTT+TGG | - | chr3.4:80677964-80677983 | None:intergenic | 10.0% |
| !!! | ATATTGTTTTATATAATACT+GGG | + | chr3.4:80676185-80676204 | MS.gene067087:intron | 10.0% |
| !!! | ATCTTTAATGTTTTTTTTTT+TGG | + | chr3.4:80677054-80677073 | MS.gene067087:intron | 10.0% |
| !!! | TCTTTAATGTTTTTTTTTTT+GGG | + | chr3.4:80677055-80677074 | MS.gene067087:intron | 10.0% |
| !! | AATATGATAACAATCAATTA+TGG | - | chr3.4:80676882-80676901 | None:intergenic | 15.0% |
| !! | CATATAAATATATAGTCATA+TGG | - | chr3.4:80676971-80676990 | None:intergenic | 15.0% |
| !! | CATATGACTATATATTTATA+TGG | + | chr3.4:80676969-80676988 | MS.gene067087:CDS | 15.0% |
| !!! | GATATTGTTTTATATAATAC+TGG | + | chr3.4:80676184-80676203 | MS.gene067087:intron | 15.0% |
| !!! | TTTTAGTTGTTTTTTGTTAT+TGG | + | chr3.4:80675889-80675908 | MS.gene067087:intron | 15.0% |
| !! | AAGTTTGGTATACAATAATA+AGG | - | chr3.4:80677949-80677968 | None:intergenic | 20.0% |
| !! | AATTACAATTGTATAACTCT+TGG | + | chr3.4:80677615-80677634 | MS.gene067087:intron | 20.0% |
| !! | AGTTTGGTATACAATAATAA+GGG | - | chr3.4:80677948-80677967 | None:intergenic | 20.0% |
| !! | ATCATTAAACAACTAATTAG+TGG | - | chr3.4:80677578-80677597 | None:intergenic | 20.0% |
| !! | CATTGATACATAATTGATAT+GGG | + | chr3.4:80676150-80676169 | MS.gene067087:intron | 20.0% |
| !! | GTTTAATATACTTTGAATGT+TGG | - | chr3.4:80678125-80678144 | None:intergenic | 20.0% |
| !! | TCATTAAACAACTAATTAGT+GGG | - | chr3.4:80677577-80677596 | None:intergenic | 20.0% |
| !! | TCATTGATACATAATTGATA+TGG | + | chr3.4:80676149-80676168 | MS.gene067087:intron | 20.0% |
| !! | TTTATATAATACTGGGAAAA+TGG | + | chr3.4:80676192-80676211 | MS.gene067087:intron | 20.0% |
| !!! | AAATTTTCCTTTTATTTGCA+GGG | + | chr3.4:80678014-80678033 | MS.gene067087:intron | 20.0% |
| !!! | GTGTGACAATTTTTTTTTAT+TGG | + | chr3.4:80675690-80675709 | MS.gene067087:intron | 20.0% |
| ! | AAAAAAAAATTGTCACACAG+TGG | - | chr3.4:80675688-80675707 | None:intergenic | 25.0% |
| ! | ATCCTTCTATTTCATTATGA+TGG | + | chr3.4:80676675-80676694 | MS.gene067087:CDS | 25.0% |
| ! | ATTAATATGTCTAATTCCAC+TGG | + | chr3.4:80678315-80678334 | MS.gene067087:CDS | 25.0% |
| ! | GTGTAATTTATAGCCATATT+AGG | - | chr3.4:80676408-80676427 | None:intergenic | 25.0% |
| ! | GTTTGGTATACAATAATAAG+GGG | - | chr3.4:80677947-80677966 | None:intergenic | 25.0% |
| ! | TAATATACTTTGAATGTTGG+AGG | - | chr3.4:80678122-80678141 | None:intergenic | 25.0% |
| ! | TACATTGAAGAAAGATATAC+AGG | + | chr3.4:80675993-80676012 | MS.gene067087:CDS | 25.0% |
| ! | TGTAGAGAAACAACAAAATA+AGG | - | chr3.4:80676253-80676272 | None:intergenic | 25.0% |
| ! | TGTATCTTAAGACAGTTTAT+AGG | + | chr3.4:80676382-80676401 | MS.gene067087:intron | 25.0% |
| !! | ACTTTTATTGGAGTAGTTTT+TGG | + | chr3.4:80675765-80675784 | MS.gene067087:CDS | 25.0% |
| !! | TTTTTACTTGATATGTGACT+TGG | + | chr3.4:80678085-80678104 | MS.gene067087:intron | 25.0% |
| !!! | ATAGCAACTCACTTTTAATT+AGG | - | chr3.4:80676858-80676877 | None:intergenic | 25.0% |
| !!! | CAAATTTTCCTTTTATTTGC+AGG | + | chr3.4:80678013-80678032 | MS.gene067087:intron | 25.0% |
| !!! | TTAACTAAGTTGACATTTTC+AGG | + | chr3.4:80676467-80676486 | MS.gene067087:intron | 25.0% |
| !!! | TTAGTGGGAATCTTTTAAAA+CGG | - | chr3.4:80677562-80677581 | None:intergenic | 25.0% |
| !!! | TTTCAGTTTTTTACTTTCTC+CGG | - | chr3.4:80677782-80677801 | None:intergenic | 25.0% |
| AAATCCTCTGTAAACAATGA+AGG | - | chr3.4:80676449-80676468 | None:intergenic | 30.0% | |
| AATAAGCCTCATAATTTCAC+TGG | - | chr3.4:80675739-80675758 | None:intergenic | 30.0% | |
| ACAAGACTAATACATTACAC+CGG | - | chr3.4:80677397-80677416 | None:intergenic | 30.0% | |
| ACCTTTGTTAATGACAATGT+TGG | - | chr3.4:80675813-80675832 | None:intergenic | 30.0% | |
| ATAAGCCTCATAATTTCACT+GGG | - | chr3.4:80675738-80675757 | None:intergenic | 30.0% | |
| ATGTCCTTAATAATGATGAC+AGG | - | chr3.4:80676108-80676127 | None:intergenic | 30.0% | |
| ATTTATATGGGATGAAGACT+TGG | + | chr3.4:80676982-80677001 | MS.gene067087:CDS | 30.0% | |
| CATATCAAATACTCACTCTT+CGG | - | chr3.4:80677026-80677045 | None:intergenic | 30.0% | |
| CTTATCAAATGACACATCAA+AGG | + | chr3.4:80676070-80676089 | MS.gene067087:CDS | 30.0% | |
| GAAGAGTGAGTATTTGATAT+GGG | + | chr3.4:80677025-80677044 | MS.gene067087:intron | 30.0% | |
| GTATCCTGTCATCATTATTA+AGG | + | chr3.4:80676101-80676120 | MS.gene067087:intron | 30.0% | |
| TAGTTTCTTCTTCCTCTTTA+CGG | + | chr3.4:80675840-80675859 | MS.gene067087:intron | 30.0% | |
| TCCAAAAGTTAATAACACAC+TGG | - | chr3.4:80676784-80676803 | None:intergenic | 30.0% | |
| TCCAACATTGTCATTAACAA+AGG | + | chr3.4:80675809-80675828 | MS.gene067087:CDS | 30.0% | |
| TGATGTTTCAATGTTGTTGA+TGG | + | chr3.4:80678202-80678221 | MS.gene067087:intron | 30.0% | |
| TTGACATAAACTAGCATATG+TGG | - | chr3.4:80675657-80675676 | None:intergenic | 30.0% | |
| TTTATATGGGATGAAGACTT+GGG | + | chr3.4:80676983-80677002 | MS.gene067087:CDS | 30.0% | |
| ! | AGTTTTACCCTGCAAATAAA+AGG | - | chr3.4:80678024-80678043 | None:intergenic | 30.0% |
| ! | CTTATTGTGACGACTTTTAT+TGG | + | chr3.4:80675753-80675772 | MS.gene067087:CDS | 30.0% |
| ! | TGGATGAAAGATTTTCATTG+TGG | + | chr3.4:80676800-80676819 | MS.gene067087:intron | 30.0% |
| ! | TTGGATTTTTGTTAGAGTGA+CGG | + | chr3.4:80677311-80677330 | MS.gene067087:intron | 30.0% |
| !! | ACCAGTGTGTTATTAACTTT+TGG | + | chr3.4:80676780-80676799 | MS.gene067087:intron | 30.0% |
| !! | ACTAAGAAAGACCTTTTTCA+CGG | - | chr3.4:80676565-80676584 | None:intergenic | 30.0% |
| !! | ATTTGAGATTTTACCCTTCT+AGG | + | chr3.4:80676906-80676925 | MS.gene067087:intron | 30.0% |
| !! | GTGTCATTTGATAAGTGATT+TGG | - | chr3.4:80676065-80676084 | None:intergenic | 30.0% |
| !! | TCATTCTTACTTTTACAGCA+TGG | + | chr3.4:80677740-80677759 | MS.gene067087:intron | 30.0% |
| !! | TGTATTAGTCTTGTATTGTC+TGG | + | chr3.4:80677403-80677422 | MS.gene067087:intron | 30.0% |
| !! | TGTTGTTTCTCTACAGATAT+GGG | + | chr3.4:80676258-80676277 | MS.gene067087:intron | 30.0% |
| !! | TTGTTGTTTCTCTACAGATA+TGG | + | chr3.4:80676257-80676276 | MS.gene067087:intron | 30.0% |
| !!! | GCGTTAACTATTGATTTTCT+TGG | + | chr3.4:80677292-80677311 | MS.gene067087:intron | 30.0% |
| !!! | GTAGTTTTTGGTTTCTTTCT+AGG | + | chr3.4:80675777-80675796 | MS.gene067087:CDS | 30.0% |
| AAAAAATTGTCACACAGTGG+TGG | - | chr3.4:80675685-80675704 | None:intergenic | 35.0% | |
| AACTAATCAACAACCTGTGA+AGG | + | chr3.4:80678142-80678161 | MS.gene067087:intron | 35.0% | |
| AATAATCTACTGCAGCACAA+AGG | - | chr3.4:80675870-80675889 | None:intergenic | 35.0% | |
| AATGTAAGAGAGATCAATCG+AGG | - | chr3.4:80675979-80675998 | None:intergenic | 35.0% | |
| AGTGAGTATTTGATATGGGA+AGG | + | chr3.4:80677029-80677048 | MS.gene067087:intron | 35.0% | |
| ATGAATGGGATGAGTTTGAA+TGG | + | chr3.4:80676706-80676725 | MS.gene067087:CDS | 35.0% | |
| ATGTAAGAGAGATCAATCGA+GGG | - | chr3.4:80675978-80675997 | None:intergenic | 35.0% | |
| ATTTACCTGATTTCCTAGTG+TGG | - | chr3.4:80677920-80677939 | None:intergenic | 35.0% | |
| CGAAGAGTGAGTATTTGATA+TGG | + | chr3.4:80677024-80677043 | MS.gene067087:intron | 35.0% | |
| GAAAACCCAGTGAAATTATG+AGG | + | chr3.4:80675730-80675749 | MS.gene067087:CDS | 35.0% | |
| GACAGTTTATAGGCCTAATA+TGG | + | chr3.4:80676392-80676411 | MS.gene067087:intron | 35.0% | |
| GGCCATCATAATGAAATAGA+AGG | - | chr3.4:80676680-80676699 | None:intergenic | 35.0% | |
| TAAGATAAAGACTCCTTCAC+AGG | - | chr3.4:80678158-80678177 | None:intergenic | 35.0% | |
| TGAGTTTGAATGGTCAAAGA+AGG | + | chr3.4:80676716-80676735 | MS.gene067087:CDS | 35.0% | |
| TGGCAAATGACAAAAAGAAG+AGG | + | chr3.4:80677187-80677206 | MS.gene067087:CDS | 35.0% | |
| TGTAAACAATGAAGGTCAGA+AGG | - | chr3.4:80676441-80676460 | None:intergenic | 35.0% | |
| TTAAAACTGGTGAAGAAGCA+TGG | + | chr3.4:80677118-80677137 | MS.gene067087:CDS | 35.0% | |
| TTATAAAAGACCAAGCACGA+CGG | - | chr3.4:80676019-80676038 | None:intergenic | 35.0% | |
| TTTACCTGATTTCCTAGTGT+GGG | - | chr3.4:80677919-80677938 | None:intergenic | 35.0% | |
| TTTATTGGATGCAGTCCTAA+TGG | + | chr3.4:80675705-80675724 | MS.gene067087:intron | 35.0% | |
| ! | ACTTTTACTTGCGTAGATTG+TGG | + | chr3.4:80676341-80676360 | MS.gene067087:CDS | 35.0% |
| ! | CTGGTTTAGAACCCAATAAA+GGG | + | chr3.4:80677158-80677177 | MS.gene067087:CDS | 35.0% |
| ! | CTTTTACTTGCGTAGATTGT+GGG | + | chr3.4:80676342-80676361 | MS.gene067087:CDS | 35.0% |
| ! | GAACATGCATATTTCAAGTC+CGG | + | chr3.4:80678285-80678304 | MS.gene067087:CDS | 35.0% |
| ! | TTTTACTTGCGTAGATTGTG+GGG | + | chr3.4:80676343-80676362 | MS.gene067087:CDS | 35.0% |
| !! | ATGCAGGTTTGTTGAGATTA+TGG | + | chr3.4:80677467-80677486 | MS.gene067087:intron | 35.0% |
| !!! | GGGAATCTTTTAAAACGGTT+AGG | - | chr3.4:80677557-80677576 | None:intergenic | 35.0% |
| AACCCAATAAAGGGTTGACA+TGG | + | chr3.4:80677167-80677186 | MS.gene067087:CDS | 40.0% | |
| ACCTGCACTTGAAATGACAA+AGG | - | chr3.4:80677096-80677115 | None:intergenic | 40.0% | |
| ACTCATCCCATTCATTAGCT+CGG | - | chr3.4:80676701-80676720 | None:intergenic | 40.0% | |
| AGACATATTAATACCACCGC+CGG | - | chr3.4:80678307-80678326 | None:intergenic | 40.0% | |
| ATGCACAATTAGATACAGCC+CGG | - | chr3.4:80677433-80677452 | None:intergenic | 40.0% | |
| ATTATCAGACCTGCGAGTAA+CGG | - | chr3.4:80675592-80675611 | None:intergenic | 40.0% | |
| ATTCTCTGTCACATGAATGC+AGG | + | chr3.4:80677451-80677470 | MS.gene067087:intron | 40.0% | |
| ATTTCTGCATCCTGACATTG+TGG | + | chr3.4:80676943-80676962 | MS.gene067087:CDS | 40.0% | |
| CAAGTGCAGGTACTTAAAAC+TGG | + | chr3.4:80677105-80677124 | MS.gene067087:intron | 40.0% | |
| CAGGCTATATCAGGAAAAAG+TGG | - | chr3.4:80677843-80677862 | None:intergenic | 40.0% | |
| CATTTCATAGCCAACAGTGA+AGG | - | chr3.4:80676523-80676542 | None:intergenic | 40.0% | |
| CTGACCTTCATTGTTTACAG+AGG | + | chr3.4:80676442-80676461 | MS.gene067087:intron | 40.0% | |
| CTTAAGATACACACCTCACT+GGG | - | chr3.4:80676373-80676392 | None:intergenic | 40.0% | |
| GAACCACAAGAAACTGCTAT+GGG | - | chr3.4:80677248-80677267 | None:intergenic | 40.0% | |
| TATTGATGCAGCCGTGAAAA+AGG | + | chr3.4:80676551-80676570 | MS.gene067087:CDS | 40.0% | |
| TCTTAAGATACACACCTCAC+TGG | - | chr3.4:80676374-80676393 | None:intergenic | 40.0% | |
| TCTTGTATTGTCTGGTCTAC+CGG | + | chr3.4:80677411-80677430 | MS.gene067087:intron | 40.0% | |
| TGAACCACAAGAAACTGCTA+TGG | - | chr3.4:80677249-80677268 | None:intergenic | 40.0% | |
| TGCAGTTAGAAGATGTGTTG+AGG | + | chr3.4:80677678-80677697 | MS.gene067087:CDS | 40.0% | |
| TGCCATGTCAACCCTTTATT+GGG | - | chr3.4:80677172-80677191 | None:intergenic | 40.0% | |
| TTGCAGGGTAAAACTGAAAC+CGG | + | chr3.4:80678029-80678048 | MS.gene067087:intron | 40.0% | |
| TTGCCATGTCAACCCTTTAT+TGG | - | chr3.4:80677173-80677192 | None:intergenic | 40.0% | |
| TTGTGTCTGGCATATGATTC+AGG | + | chr3.4:80677518-80677537 | MS.gene067087:CDS | 40.0% | |
| ! | ACCTTTGTCATTTCAAGTGC+AGG | + | chr3.4:80677092-80677111 | MS.gene067087:intron | 40.0% |
| ! | CCTGGTTTAGAACCCAATAA+AGG | + | chr3.4:80677157-80677176 | MS.gene067087:CDS | 40.0% |
| ! | GATTTTTGTTAGAGTGACGG+AGG | + | chr3.4:80677314-80677333 | MS.gene067087:intron | 40.0% |
| ! | TCACTGGGTTTTCTACCATT+AGG | - | chr3.4:80675723-80675742 | None:intergenic | 40.0% |
| ! | TGAGATTTTACCCTTCTAGG+TGG | + | chr3.4:80676909-80676928 | MS.gene067087:intron | 40.0% |
| !! | CCTTTATTGGGTTCTAAACC+AGG | - | chr3.4:80677160-80677179 | None:intergenic | 40.0% |
| !! | GGCATATGATTCAGGTTGAA+TGG | + | chr3.4:80677526-80677545 | MS.gene067087:intron | 40.0% |
| !! | GTTTCAATGTTGTTGATGGC+AGG | + | chr3.4:80678206-80678225 | MS.gene067087:intron | 40.0% |
| ACTCCAATCTTCTCATGTGC+AGG | - | chr3.4:80677862-80677881 | None:intergenic | 45.0% | |
| AGTCCCATAGCAGTTTCTTG+TGG | + | chr3.4:80677242-80677261 | MS.gene067087:intron | 45.0% | |
| AGTGGACCATGTTTCAGAGT+CGG | + | chr3.4:80678250-80678269 | MS.gene067087:CDS | 45.0% | |
| ATGATGGCCGAGCTAATGAA+TGG | + | chr3.4:80676691-80676710 | MS.gene067087:CDS | 45.0% | |
| CAAAATCAAGTCCCCATCCA+TGG | - | chr3.4:80677660-80677679 | None:intergenic | 45.0% | |
| CTTGGCATTGCAGAATGACT+TGG | + | chr3.4:80677633-80677652 | MS.gene067087:intron | 45.0% | |
| CTTGTATTGTCTGGTCTACC+GGG | + | chr3.4:80677412-80677431 | MS.gene067087:intron | 45.0% | |
| GCTTAGCATACCACCTAGAA+GGG | - | chr3.4:80676922-80676941 | None:intergenic | 45.0% | |
| GGTAAACTTTCTGCTCCTCT+TGG | - | chr3.4:80676295-80676314 | None:intergenic | 45.0% | |
| GTGCTCGCAAACAGACTAAA+TGG | + | chr3.4:80676751-80676770 | MS.gene067087:CDS | 45.0% | |
| TACCTTGTGACCTTCACTGT+TGG | + | chr3.4:80676510-80676529 | MS.gene067087:CDS | 45.0% | |
| TAGCCTGCACATGAGAAGAT+TGG | + | chr3.4:80677856-80677875 | MS.gene067087:intron | 45.0% | |
| TCTCATGTGCAGGCTATATC+AGG | - | chr3.4:80677852-80677871 | None:intergenic | 45.0% | |
| TCTGCTCCTCTTGGATTTGA+TGG | - | chr3.4:80676286-80676305 | None:intergenic | 45.0% | |
| TGATGGCCGAGCTAATGAAT+GGG | + | chr3.4:80676692-80676711 | MS.gene067087:CDS | 45.0% | |
| TGCAGGGTAAAACTGAAACC+GGG | + | chr3.4:80678030-80678049 | MS.gene067087:intron | 45.0% | |
| TGGGTTCCATCAAATCCAAG+AGG | + | chr3.4:80676277-80676296 | MS.gene067087:CDS | 45.0% | |
| TGTTCCCACACTAGGAAATC+AGG | + | chr3.4:80677912-80677931 | MS.gene067087:CDS | 45.0% | |
| TTGCAGTTCAATCTCCCATC+TGG | + | chr3.4:80675945-80675964 | MS.gene067087:intron | 45.0% | |
| TTGGAGTTGTCGATGCTCAA+TGG | + | chr3.4:80677875-80677894 | MS.gene067087:CDS | 45.0% | |
| ! | CATGCATATTTCAAGTCCGG+CGG | + | chr3.4:80678288-80678307 | MS.gene067087:CDS | 45.0% |
| ! | GCAGCTTGCACTTTTAGCAT+TGG | - | chr3.4:80675917-80675936 | None:intergenic | 45.0% |
| ! | GTGAAGGTCACAAGGTACTT+TGG | - | chr3.4:80676507-80676526 | None:intergenic | 45.0% |
| !! | AATGACTTGGTCCATGGATG+GGG | + | chr3.4:80677646-80677665 | MS.gene067087:CDS | 45.0% |
| !! | AATGTTGTTGATGGCAGGTG+AGG | + | chr3.4:80678211-80678230 | MS.gene067087:intron | 45.0% |
| !! | AGAATGACTTGGTCCATGGA+TGG | + | chr3.4:80677644-80677663 | MS.gene067087:intron | 45.0% |
| !! | ATGTTGTTGATGGCAGGTGA+GGG | + | chr3.4:80678212-80678231 | MS.gene067087:intron | 45.0% |
| !! | GAATGACTTGGTCCATGGAT+GGG | + | chr3.4:80677645-80677664 | MS.gene067087:intron | 45.0% |
| !! | GCTCAATGGATTGTTCACCA+AGG | + | chr3.4:80677889-80677908 | MS.gene067087:CDS | 45.0% |
| !! | TCATATGGTGCCACAATGTC+AGG | - | chr3.4:80676956-80676975 | None:intergenic | 45.0% |
| !! | TTGCAGAATGACTTGGTCCA+TGG | + | chr3.4:80677640-80677659 | MS.gene067087:intron | 45.0% |
| AACCAGGCTGTGAAATCTCC+AGG | - | chr3.4:80677144-80677163 | None:intergenic | 50.0% | |
| ACAAGGAGGTAAATGGGGGT+CGG | - | chr3.4:80677358-80677377 | None:intergenic | 50.0% | |
| ACGCTGCACAAGGAGGTAAA+TGG | - | chr3.4:80677365-80677384 | None:intergenic | 50.0% | |
| AGCCAACAGTGAAGGTCACA+AGG | - | chr3.4:80676515-80676534 | None:intergenic | 50.0% | |
| CAGTATTCTCGCGAGAAGCA+TGG | + | chr3.4:80677493-80677512 | MS.gene067087:CDS | 50.0% | |
| CATGCTTCTCGCGAGAATAC+TGG | - | chr3.4:80677495-80677514 | None:intergenic | 50.0% | |
| CGACTCAGCTTCAACAATGC+CGG | - | chr3.4:80676320-80676339 | None:intergenic | 50.0% | |
| CGCTGCACAAGGAGGTAAAT+GGG | - | chr3.4:80677364-80677383 | None:intergenic | 50.0% | |
| CGCTTAGCATACCACCTAGA+AGG | - | chr3.4:80676923-80676942 | None:intergenic | 50.0% | |
| CGGCATTGTTGAAGCTGAGT+CGG | + | chr3.4:80676318-80676337 | MS.gene067087:CDS | 50.0% | |
| CTGCACAAGGAGGTAAATGG+GGG | - | chr3.4:80677362-80677381 | None:intergenic | 50.0% | |
| GACTCAGCTTCAACAATGCC+GGG | - | chr3.4:80676319-80676338 | None:intergenic | 50.0% | |
| GCAAAATATACCCCCTGCCA+TGG | - | chr3.4:80678062-80678081 | None:intergenic | 50.0% | |
| GCAGTTACTTACGCTGCACA+AGG | - | chr3.4:80677375-80677394 | None:intergenic | 50.0% | |
| GCTGCACAAGGAGGTAAATG+GGG | - | chr3.4:80677363-80677382 | None:intergenic | 50.0% | |
| GGAGCAGAAAGTTTACCTCC+CGG | + | chr3.4:80676298-80676317 | MS.gene067087:CDS | 50.0% | |
| GTTACTTACGCTGCACAAGG+AGG | - | chr3.4:80677372-80677391 | None:intergenic | 50.0% | |
| TGTGCAGCGTAAGTAACTGC+CGG | + | chr3.4:80677375-80677394 | MS.gene067087:intron | 50.0% | |
| TTACAGCATGGTCCTAGCAG+CGG | + | chr3.4:80677752-80677771 | MS.gene067087:intron | 50.0% | |
| TTCCTAGTGTGGGAACACCT+TGG | - | chr3.4:80677909-80677928 | None:intergenic | 50.0% | |
| ! | CACAAAGGTACGCCGTAAAG+AGG | - | chr3.4:80675855-80675874 | None:intergenic | 50.0% |
| ! | TAGAGTGACGGAGGAGAAAC+CGG | + | chr3.4:80677323-80677342 | MS.gene067087:intron | 50.0% |
| !! | CGCTAACCGACTCTGAAACA+TGG | - | chr3.4:80678259-80678278 | None:intergenic | 50.0% |
| ATCGAGGGAAGCAAGCCAGA+TGG | - | chr3.4:80675963-80675982 | None:intergenic | 55.0% | |
| ATTGTGGGGCAAACCCAGTG+AGG | + | chr3.4:80676357-80676376 | MS.gene067087:CDS | 55.0% | |
| GATATACAGGCCGTCGTGCT+TGG | + | chr3.4:80676006-80676025 | MS.gene067087:CDS | 55.0% | |
| GGGAGAGATGTAGGAAGGAG+TGG | + | chr3.4:80678232-80678251 | MS.gene067087:CDS | 55.0% | |
| GGTGAGGGAGAGATGTAGGA+AGG | + | chr3.4:80678227-80678246 | MS.gene067087:intron | 55.0% | |
| TCAGCTTCAACAATGCCGGG+AGG | - | chr3.4:80676316-80676335 | None:intergenic | 55.0% | |
| TCGAGGGAAGCAAGCCAGAT+GGG | - | chr3.4:80675962-80675981 | None:intergenic | 55.0% | |
| ! | ACTGGTGAAGAAGCATGGCC+TGG | + | chr3.4:80677123-80677142 | MS.gene067087:CDS | 55.0% |
| ! | AGAGTGACGGAGGAGAAACC+GGG | + | chr3.4:80677324-80677343 | MS.gene067087:intron | 55.0% |
| ! | CACCAAGGTGTTCCCACACT+AGG | + | chr3.4:80677904-80677923 | MS.gene067087:CDS | 55.0% |
| ! | GAGAAGCATGGCGTTGTGTC+TGG | + | chr3.4:80677505-80677524 | MS.gene067087:CDS | 55.0% |
| ! | GCATATTTCAAGTCCGGCGG+TGG | + | chr3.4:80678291-80678310 | MS.gene067087:CDS | 55.0% |
| !! | CTGAAACCGGGAAAGCACCA+TGG | + | chr3.4:80678042-80678061 | MS.gene067087:CDS | 55.0% |
| GGCAGGTGAGGGAGAGATGT+AGG | + | chr3.4:80678223-80678242 | MS.gene067087:intron | 60.0% | |
| GGCCTGGAGATTTCACAGCC+TGG | + | chr3.4:80677139-80677158 | MS.gene067087:CDS | 60.0% | |
| TGACGGAGGAGAAACCGGGA+TGG | + | chr3.4:80677328-80677347 | MS.gene067087:CDS | 60.0% | |
| TGGTCCTAGCAGCGGCTTAC+CGG | + | chr3.4:80677760-80677779 | MS.gene067087:intron | 60.0% | |
| TTCTCCGGTAAGCCGCTGCT+AGG | - | chr3.4:80677767-80677786 | None:intergenic | 60.0% | |
| !! | AACCGGGAAAGCACCATGGC+AGG | + | chr3.4:80678046-80678065 | MS.gene067087:CDS | 60.0% |
| !! | ACCGGGAAAGCACCATGGCA+GGG | + | chr3.4:80678047-80678066 | MS.gene067087:CDS | 60.0% |
| CCCCTGCCATGGTGCTTTCC+CGG | - | chr3.4:80678051-80678070 | None:intergenic | 65.0% | |
| TGGGGGTCGGAACACCATCC+CGG | - | chr3.4:80677345-80677364 | None:intergenic | 65.0% | |
| !! | CCGGGAAAGCACCATGGCAG+GGG | + | chr3.4:80678048-80678067 | MS.gene067087:CDS | 65.0% |
| !! | CGGGAAAGCACCATGGCAGG+GGG | + | chr3.4:80678049-80678068 | MS.gene067087:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 80675582 | 80678344 | 80675582 | ID=MS.gene067087 |
| chr3.4 | mRNA | 80675582 | 80678344 | 80675582 | ID=MS.gene067087.t1;Parent=MS.gene067087 |
| chr3.4 | exon | 80675582 | 80675601 | 80675582 | ID=MS.gene067087.t1.exon1;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80675582 | 80675601 | 80675582 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80675719 | 80675830 | 80675719 | ID=MS.gene067087.t1.exon2;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80675719 | 80675830 | 80675719 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80675951 | 80676091 | 80675951 | ID=MS.gene067087.t1.exon3;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80675951 | 80676091 | 80675951 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80676274 | 80676378 | 80676274 | ID=MS.gene067087.t1.exon4;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80676274 | 80676378 | 80676274 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80676489 | 80676572 | 80676489 | ID=MS.gene067087.t1.exon5;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80676489 | 80676572 | 80676489 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80676657 | 80676772 | 80676657 | ID=MS.gene067087.t1.exon6;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80676657 | 80676772 | 80676657 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80676928 | 80677029 | 80676928 | ID=MS.gene067087.t1.exon7;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80676928 | 80677029 | 80676928 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80677114 | 80677227 | 80677114 | ID=MS.gene067087.t1.exon8;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80677114 | 80677227 | 80677114 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80677326 | 80677382 | 80677326 | ID=MS.gene067087.t1.exon9;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80677326 | 80677382 | 80677326 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80677473 | 80677539 | 80677473 | ID=MS.gene067087.t1.exon10;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80677473 | 80677539 | 80677473 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80677646 | 80677699 | 80677646 | ID=MS.gene067087.t1.exon11;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80677646 | 80677699 | 80677646 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80677859 | 80677933 | 80677859 | ID=MS.gene067087.t1.exon12;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80677859 | 80677933 | 80677859 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80678035 | 80678070 | 80678035 | ID=MS.gene067087.t1.exon13;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80678035 | 80678070 | 80678035 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| chr3.4 | exon | 80678228 | 80678344 | 80678228 | ID=MS.gene067087.t1.exon14;Parent=MS.gene067087.t1 |
| chr3.4 | CDS | 80678228 | 80678344 | 80678228 | ID=cds.MS.gene067087.t1;Parent=MS.gene067087.t1 |
| Gene Sequence |
| Protein sequence |
