Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052855.t1 | XP_013466771.1 | 95 | 606 | 23 | 3 | 1 | 605 | 1 | 600 | 0.00E+00 | 1146 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052855.t1 | A0A072VGA5 | 95.0 | 606 | 23 | 3 | 1 | 605 | 1 | 600 | 0.0e+00 | 1146.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene052855 | 0.807244 | 5.56E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene052855 | 0.802777 | 4.77E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene052855 | 0.807405 | 5.14E-50 | -1.69E-46 |
| MS.gene052534 | MS.gene052855 | 0.802652 | 5.07E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene052888 | 0.882724 | 8.19E-71 | -1.69E-46 |
| MS.gene052855 | MS.gene052889 | 0.897103 | 1.95E-76 | -1.69E-46 |
| MS.gene052855 | MS.gene052890 | 0.902665 | 7.69E-79 | -1.69E-46 |
| MS.gene052855 | MS.gene055513 | 0.820185 | 7.84E-53 | -1.69E-46 |
| MS.gene052855 | MS.gene057034 | 0.800784 | 1.22E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene059439 | 0.80167 | 8.07E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene05985 | -0.801387 | 9.22E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene060365 | 0.809748 | 1.62E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene060777 | 0.807571 | 4.74E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene061100 | 0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene061707 | 0.803519 | 3.35E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene062156 | 0.80326 | 3.79E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene06372 | 0.817249 | 3.64E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene064969 | 0.831575 | 1.54E-55 | -1.69E-46 |
| MS.gene052855 | MS.gene066321 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene066513 | 0.805432 | 1.34E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene067087 | 0.804612 | 1.99E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene067173 | 0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene070918 | 0.802857 | 4.60E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene072116 | 0.811746 | 6.00E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene074607 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene07510 | 0.806354 | 8.57E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene09600 | 0.801276 | 9.72E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene09656 | 0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene28454 | 0.829405 | 5.24E-55 | -1.69E-46 |
| MS.gene052855 | MS.gene32801 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene33135 | 0.814131 | 1.80E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene33651 | 0.809539 | 1.80E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene34444 | 0.801507 | 8.72E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene34937 | 0.813561 | 2.40E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene35107 | 0.815008 | 1.15E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene35323 | 0.812134 | 4.94E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene36440 | 0.814125 | 1.81E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene36987 | 0.804733 | 1.88E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene39253 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene39314 | 0.81601 | 6.89E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene40079 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene40157 | 0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene41678 | 0.805603 | 1.23E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene44179 | 0.805104 | 1.57E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene47601 | 0.80086 | 1.18E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene47822 | 0.80648 | 8.06E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene47967 | 0.803085 | 4.12E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene49613 | 0.800561 | 1.36E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene51789 | 0.815969 | 7.04E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene53612 | 0.82285 | 1.90E-53 | -1.69E-46 |
| MS.gene052855 | MS.gene54045 | 0.819507 | 1.12E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene54197 | 0.807571 | 4.74E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene54377 | 0.806877 | 6.65E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene54380 | 0.80634 | 8.63E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene57028 | 0.807234 | 5.58E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene57709 | 0.813018 | 3.16E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene58134 | 0.830266 | 3.24E-55 | -1.69E-46 |
| MS.gene052855 | MS.gene58763 | 0.820936 | 5.27E-53 | -1.69E-46 |
| MS.gene052855 | MS.gene58919 | 0.812506 | 4.10E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene59697 | 0.809674 | 1.68E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene62677 | 0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene63530 | 0.800558 | 1.36E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene64284 | 0.815532 | 8.81E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene66544 | 0.801192 | 1.01E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene69691 | 0.800857 | 1.18E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene69692 | 0.80255 | 5.32E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene70154 | 0.80902 | 2.33E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene70282 | 0.822207 | 2.68E-53 | -1.69E-46 |
| MS.gene052855 | MS.gene70656 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene71810 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene052855 | MS.gene71945 | 0.80448 | 2.12E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene73678 | 0.806382 | 8.45E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene74537 | 0.816783 | 4.63E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene75067 | 0.801325 | 9.50E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene75229 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene75343 | 0.826056 | 3.34E-54 | -1.69E-46 |
| MS.gene052855 | MS.gene76244 | 0.821881 | 3.19E-53 | -1.69E-46 |
| MS.gene052855 | MS.gene77356 | 0.816114 | 6.53E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene77361 | 0.804163 | 2.47E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene78642 | 0.81545 | 9.19E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene79285 | 0.809673 | 1.68E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene79543 | 0.801153 | 1.03E-48 | -1.69E-46 |
| MS.gene052855 | MS.gene80631 | 0.829588 | 4.73E-55 | -1.69E-46 |
| MS.gene052855 | MS.gene81047 | 0.813504 | 2.48E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene84454 | 0.807505 | 4.89E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene85936 | 0.810025 | 1.42E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene86826 | 0.810395 | 1.18E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene87673 | 0.819379 | 1.20E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene90585 | 0.809805 | 1.58E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene91778 | 0.8345 | 2.89E-56 | -1.69E-46 |
| MS.gene052855 | MS.gene92320 | 0.808396 | 3.16E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene94674 | 0.82569 | 4.09E-54 | -1.69E-46 |
| MS.gene052855 | MS.gene97613 | 0.806408 | 8.35E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene98852 | 0.813421 | 2.58E-51 | -1.69E-46 |
| MS.gene052855 | MS.gene99894 | 0.822995 | 1.76E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052855.t1 | MTR_1g035690 | 95.050 | 606 | 23 | 3 | 1 | 605 | 1 | 600 | 0.0 | 1184 |
| MS.gene052855.t1 | MTR_8g033290 | 58.934 | 638 | 214 | 10 | 1 | 605 | 1 | 623 | 0.0 | 700 |
| MS.gene052855.t1 | MTR_5g061340 | 39.564 | 551 | 310 | 9 | 67 | 604 | 434 | 974 | 1.04e-125 | 394 |
| MS.gene052855.t1 | MTR_3g073590 | 41.983 | 474 | 267 | 6 | 134 | 604 | 333 | 801 | 4.21e-124 | 385 |
| MS.gene052855.t1 | MTR_5g018820 | 34.437 | 151 | 91 | 2 | 391 | 533 | 395 | 545 | 1.35e-18 | 90.1 |
| MS.gene052855.t1 | MTR_8g078760 | 32.778 | 180 | 109 | 4 | 391 | 561 | 398 | 574 | 4.29e-18 | 88.6 |
| MS.gene052855.t1 | MTR_5g012790 | 26.613 | 248 | 158 | 10 | 343 | 575 | 309 | 547 | 3.80e-16 | 82.4 |
| MS.gene052855.t1 | MTR_4g068920 | 31.818 | 154 | 97 | 3 | 391 | 536 | 405 | 558 | 7.79e-16 | 81.3 |
| MS.gene052855.t1 | MTR_8g078760 | 32.824 | 131 | 80 | 2 | 391 | 513 | 398 | 528 | 2.42e-12 | 70.1 |
| MS.gene052855.t1 | MTR_3g101340 | 26.842 | 190 | 121 | 6 | 391 | 570 | 341 | 522 | 4.07e-12 | 69.3 |
| MS.gene052855.t1 | MTR_3g101340 | 27.174 | 184 | 116 | 6 | 397 | 570 | 321 | 496 | 4.79e-12 | 69.3 |
| MS.gene052855.t1 | MTR_4g058015 | 26.768 | 198 | 122 | 6 | 391 | 574 | 461 | 649 | 5.19e-12 | 69.3 |
| MS.gene052855.t1 | MTR_3g101340 | 26.042 | 192 | 116 | 6 | 397 | 570 | 346 | 529 | 4.38e-11 | 66.2 |
| MS.gene052855.t1 | MTR_8g079840 | 28.962 | 183 | 106 | 8 | 401 | 570 | 383 | 554 | 5.99e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052855.t1 | AT3G11920 | 53.633 | 578 | 237 | 9 | 41 | 605 | 71 | 630 | 0.0 | 586 |
| MS.gene052855.t1 | AT4G08550 | 39.368 | 475 | 279 | 7 | 134 | 605 | 223 | 691 | 8.09e-113 | 353 |
| MS.gene052855.t1 | AT4G08550 | 42.023 | 257 | 146 | 3 | 351 | 605 | 382 | 637 | 1.51e-61 | 215 |
| MS.gene052855.t1 | AT4G08550 | 36.364 | 154 | 93 | 3 | 134 | 287 | 223 | 371 | 3.56e-23 | 104 |
| MS.gene052855.t1 | AT1G16750 | 31.707 | 205 | 125 | 6 | 388 | 582 | 295 | 494 | 4.46e-20 | 94.4 |
| MS.gene052855.t1 | AT3G13000 | 30.085 | 236 | 130 | 7 | 371 | 588 | 303 | 521 | 6.69e-20 | 94.0 |
| MS.gene052855.t1 | AT3G13000 | 30.085 | 236 | 130 | 7 | 371 | 588 | 332 | 550 | 6.85e-20 | 94.0 |
| MS.gene052855.t1 | AT3G13000 | 30.085 | 236 | 130 | 7 | 371 | 588 | 332 | 550 | 6.85e-20 | 94.0 |
| MS.gene052855.t1 | AT5G66600 | 28.652 | 178 | 117 | 3 | 391 | 561 | 331 | 505 | 8.09e-18 | 87.4 |
| MS.gene052855.t1 | AT5G66600 | 28.652 | 178 | 117 | 3 | 391 | 561 | 365 | 539 | 8.53e-18 | 87.4 |
| MS.gene052855.t1 | AT5G66600 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.23e-18 | 87.4 |
| MS.gene052855.t1 | AT5G66600 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.23e-18 | 87.4 |
| MS.gene052855.t1 | AT5G66600 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.23e-18 | 87.4 |
| MS.gene052855.t1 | AT5G66600 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.23e-18 | 87.4 |
| MS.gene052855.t1 | AT5G66600 | 28.652 | 178 | 117 | 3 | 391 | 561 | 385 | 559 | 9.23e-18 | 87.4 |
| MS.gene052855.t1 | AT2G23700 | 32.778 | 180 | 106 | 5 | 392 | 561 | 479 | 653 | 1.26e-16 | 84.0 |
| MS.gene052855.t1 | AT5G42690 | 30.851 | 188 | 114 | 6 | 391 | 570 | 290 | 469 | 1.17e-15 | 80.5 |
| MS.gene052855.t1 | AT5G42690 | 30.108 | 186 | 118 | 5 | 391 | 570 | 265 | 444 | 1.20e-15 | 80.5 |
| MS.gene052855.t1 | AT5G42690 | 30.851 | 188 | 114 | 6 | 391 | 570 | 317 | 496 | 1.41e-15 | 80.5 |
| MS.gene052855.t1 | AT5G42690 | 30.851 | 188 | 114 | 6 | 391 | 570 | 317 | 496 | 1.41e-15 | 80.5 |
| MS.gene052855.t1 | AT5G42690 | 30.851 | 188 | 114 | 6 | 391 | 570 | 316 | 495 | 1.47e-15 | 80.5 |
| MS.gene052855.t1 | AT5G47380 | 26.316 | 247 | 158 | 9 | 359 | 591 | 272 | 508 | 1.31e-13 | 74.3 |
| MS.gene052855.t1 | AT5G47380 | 26.316 | 247 | 158 | 9 | 359 | 591 | 328 | 564 | 1.32e-13 | 74.3 |
| MS.gene052855.t1 | AT5G47380 | 26.316 | 247 | 158 | 9 | 359 | 591 | 328 | 564 | 1.49e-13 | 74.3 |
| MS.gene052855.t1 | AT1G43020 | 29.775 | 178 | 115 | 2 | 381 | 551 | 202 | 376 | 2.38e-13 | 72.8 |
| MS.gene052855.t1 | AT4G37080 | 30.508 | 177 | 111 | 6 | 401 | 570 | 396 | 567 | 3.54e-13 | 72.8 |
| MS.gene052855.t1 | AT4G37080 | 30.508 | 177 | 111 | 6 | 401 | 570 | 396 | 567 | 3.54e-13 | 72.8 |
| MS.gene052855.t1 | AT4G37080 | 30.508 | 177 | 111 | 6 | 401 | 570 | 383 | 554 | 3.85e-13 | 72.8 |
| MS.gene052855.t1 | AT3G18900 | 32.298 | 161 | 95 | 5 | 391 | 541 | 228 | 384 | 4.85e-13 | 72.0 |
| MS.gene052855.t1 | AT3G18900 | 32.298 | 161 | 95 | 5 | 391 | 541 | 228 | 384 | 4.85e-13 | 72.0 |
| MS.gene052855.t1 | AT3G18900 | 32.919 | 161 | 94 | 5 | 391 | 541 | 304 | 460 | 5.39e-13 | 72.0 |
| MS.gene052855.t1 | AT3G18900 | 32.919 | 161 | 94 | 5 | 391 | 541 | 309 | 465 | 5.95e-13 | 72.0 |
| MS.gene052855.t1 | AT1G16750 | 46.154 | 78 | 37 | 2 | 388 | 462 | 295 | 370 | 4.59e-12 | 68.6 |
| MS.gene052855.t1 | AT5G66600 | 31.538 | 130 | 82 | 2 | 391 | 513 | 385 | 514 | 4.95e-12 | 68.9 |
| MS.gene052855.t1 | AT5G66600 | 31.538 | 130 | 82 | 2 | 391 | 513 | 385 | 514 | 4.95e-12 | 68.9 |
| MS.gene052855.t1 | AT5G66600 | 31.538 | 130 | 82 | 2 | 391 | 513 | 385 | 514 | 4.95e-12 | 68.9 |
| MS.gene052855.t1 | AT5G66600 | 31.538 | 130 | 82 | 2 | 391 | 513 | 385 | 514 | 4.95e-12 | 68.9 |
| MS.gene052855.t1 | AT1G76620 | 28.571 | 182 | 114 | 6 | 391 | 561 | 293 | 469 | 1.40e-11 | 67.8 |
Find 102 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAATTACCACTTCAAAAT+TGG | 0.141892 | 1.4:+20264243 | None:intergenic |
| TCTCAAAATGTTTCAATTTC+CGG | 0.172190 | 1.4:-20266653 | MS.gene052855:CDS |
| TGCAGGTACAGTGTTGATTT+TGG | 0.235808 | 1.4:-20264130 | MS.gene052855:intron |
| ATGAAAGAAATGTGGTAAAA+TGG | 0.248386 | 1.4:-20264105 | MS.gene052855:CDS |
| CTCAAAATGTTTCAATTTCC+GGG | 0.252022 | 1.4:-20266652 | MS.gene052855:CDS |
| GTAATAGTGGCAAGAGAATA+AGG | 0.303287 | 1.4:+20265432 | None:intergenic |
| ATTCCGGTGGCACCGGAGTA+TGG | 0.309317 | 1.4:-20268718 | MS.gene052855:CDS |
| TCAGCAAAAGTGAAGAATTT+AGG | 0.316081 | 1.4:-20266506 | MS.gene052855:CDS |
| TTGATGGGATTGTTTCGTTT+GGG | 0.320777 | 1.4:+20269232 | None:intergenic |
| TCTGATTTCCAGTATTTGAT+TGG | 0.336556 | 1.4:-20265462 | MS.gene052855:CDS |
| GTTGATGGGATTGTTTCGTT+TGG | 0.340065 | 1.4:+20269231 | None:intergenic |
| AACGACAAGCTGTCGTCGTT+GGG | 0.351556 | 1.4:-20269033 | MS.gene052855:CDS |
| AAGGGCTTGACTAAGGAATA+AGG | 0.386116 | 1.4:+20265378 | None:intergenic |
| ATGAATCCTTTGATTCACTT+TGG | 0.386588 | 1.4:-20264411 | MS.gene052855:CDS |
| ATGTGCAACTAGAGAGTTCT+TGG | 0.396266 | 1.4:-20264316 | MS.gene052855:CDS |
| AGTCTTATGCTTCTGAAGAT+AGG | 0.396481 | 1.4:-20266551 | MS.gene052855:CDS |
| AGATAAACGGTTCATGTTCA+AGG | 0.408067 | 1.4:+20266673 | None:intergenic |
| AACGACGACAGCTTGTCGTT+GGG | 0.408096 | 1.4:+20269036 | None:intergenic |
| GAGGATACCATTTGTAATAG+TGG | 0.409546 | 1.4:+20265419 | None:intergenic |
| TTCTTCAACGACAAGCTAAT+CGG | 0.410642 | 1.4:-20268835 | MS.gene052855:CDS |
| CTTCTGTCATTTGTGCCAAA+GGG | 0.419712 | 1.4:+20265360 | None:intergenic |
| AGAGATTACCGATTCAAGAT+AGG | 0.427159 | 1.4:-20268630 | MS.gene052855:CDS |
| ATTCACTTTGGACTTTGTAA+TGG | 0.433942 | 1.4:-20264399 | MS.gene052855:CDS |
| CAAGCTAATCGGTGGATTAG+TGG | 0.434140 | 1.4:-20268824 | MS.gene052855:CDS |
| ACAGATCATTACTGCGTTGT+CGG | 0.441603 | 1.4:+20269193 | None:intergenic |
| GTGCAGCTGCAGTCTGTGAT+AGG | 0.443467 | 1.4:-20266602 | MS.gene052855:CDS |
| GTCAAGAAGGTGTAATCAAT+AGG | 0.445472 | 1.4:-20265494 | MS.gene052855:CDS |
| TCAAAATTGGAGTGAGATGA+AGG | 0.447979 | 1.4:+20264256 | None:intergenic |
| TGAATTAGAGAAGAAATTGA+TGG | 0.449683 | 1.4:-20268770 | MS.gene052855:CDS |
| TTCTTGTATGAGATATGAAC+AGG | 0.451107 | 1.4:+20264019 | None:intergenic |
| AAAGAGCTGAAACAAAGAAC+TGG | 0.457091 | 1.4:-20268886 | MS.gene052855:CDS |
| TATTCCTTAGTCAAGCCCTT+TGG | 0.459648 | 1.4:-20265375 | MS.gene052855:CDS |
| AGAAGCATAAGACTCAAGTA+TGG | 0.463463 | 1.4:+20266560 | None:intergenic |
| CCTTCTGTCATTTGTGCCAA+AGG | 0.463764 | 1.4:+20265359 | None:intergenic |
| TGATGGGATTGTTTCGTTTG+GGG | 0.466535 | 1.4:+20269233 | None:intergenic |
| TCTCTTGCCACTATTACAAA+TGG | 0.468074 | 1.4:-20265426 | MS.gene052855:CDS |
| TTGACACATCTCTTAGCTGA+TGG | 0.468309 | 1.4:-20264046 | MS.gene052855:CDS |
| GATTTCCAGTATTTGATTGG+AGG | 0.471100 | 1.4:-20265459 | MS.gene052855:CDS |
| TGTGCCAAAGGGCTTGACTA+AGG | 0.473650 | 1.4:+20265371 | None:intergenic |
| GATGTCCTCCAATCAAATAC+TGG | 0.481014 | 1.4:+20265454 | None:intergenic |
| TTCATCAACCTATCTTGAAT+CGG | 0.484714 | 1.4:+20268622 | None:intergenic |
| TGAGATGGTGGAAGTGGAAA+AGG | 0.491325 | 1.4:-20268689 | MS.gene052855:CDS |
| AATGCTTAGGCTGTTGAGGT+TGG | 0.495478 | 1.4:-20266859 | MS.gene052855:intron |
| AGAGAGTTCTTGGAGGATGA+TGG | 0.496857 | 1.4:-20264306 | MS.gene052855:CDS |
| TTGTCGTTGAAGAAAATCAT+TGG | 0.501140 | 1.4:+20268844 | None:intergenic |
| ATTTGATGAGATGGTGGAAG+TGG | 0.501612 | 1.4:-20268695 | MS.gene052855:CDS |
| CGGTGATATTCCGGTGGCAC+CGG | 0.502364 | 1.4:-20268725 | MS.gene052855:CDS |
| ATGGGATTGTTTCGTTTGGG+GGG | 0.504694 | 1.4:+20269235 | None:intergenic |
| GTGATCTTCGATTGCTTCTG+AGG | 0.509976 | 1.4:+20265400 | None:intergenic |
| TCTCATACAAGAATTATGAT+TGG | 0.514584 | 1.4:-20264009 | MS.gene052855:CDS |
| TACTTGGATGCAAATAAAGC+TGG | 0.516390 | 1.4:-20264073 | MS.gene052855:CDS |
| GTGACAGAGTTCAATCTCTC+CGG | 0.523173 | 1.4:-20269087 | MS.gene052855:CDS |
| AACAAATGCTTAGGCTGTTG+AGG | 0.523405 | 1.4:-20266863 | MS.gene052855:intron |
| AACTCTTCAGCAACTCTACA+AGG | 0.523810 | 1.4:+20264342 | None:intergenic |
| CAAAGTCCAAAGTGAATCAA+AGG | 0.526806 | 1.4:+20264405 | None:intergenic |
| CAACGACAAGCTGTCGTCGT+TGG | 0.527022 | 1.4:-20269034 | MS.gene052855:CDS |
| AATCCATACTCCGGTGCCAC+CGG | 0.531377 | 1.4:+20268715 | None:intergenic |
| GATGGGATTGTTTCGTTTGG+GGG | 0.531764 | 1.4:+20269234 | None:intergenic |
| CAGCTTCTTGTAAGAAACCA+TGG | 0.536531 | 1.4:-20268556 | MS.gene052855:CDS |
| GGGGTGTGAATTTGAAACAG+GGG | 0.536925 | 1.4:+20269254 | None:intergenic |
| GGGTGTGAATTTGAAACAGG+GGG | 0.537249 | 1.4:+20269255 | None:intergenic |
| TAGGAGACATGTTGATTATG+TGG | 0.538664 | 1.4:-20266532 | MS.gene052855:CDS |
| CAACGACGACAGCTTGTCGT+TGG | 0.539513 | 1.4:+20269035 | None:intergenic |
| CTTAAACTTGTACAATGCCA+TGG | 0.555357 | 1.4:-20265544 | MS.gene052855:CDS |
| ACACATCTCTTAGCTGATGG+TGG | 0.563336 | 1.4:-20264043 | MS.gene052855:CDS |
| ATCCTACTCTTATCATAGCA+TGG | 0.563711 | 1.4:+20265517 | None:intergenic |
| GATGAAGGGTCCTCTTCTCT+AGG | 0.574774 | 1.4:+20264271 | None:intergenic |
| TTCAACGACAAGCTAATCGG+TGG | 0.578385 | 1.4:-20268832 | MS.gene052855:CDS |
| AAATTGATGGAAATTGCGAA+TGG | 0.580140 | 1.4:-20268757 | MS.gene052855:CDS |
| AAAGGAGGATGAGATAGTGA+AGG | 0.580685 | 1.4:-20268671 | MS.gene052855:CDS |
| TTTCTTACCCGAAAACAGGA+TGG | 0.586581 | 1.4:+20266809 | None:intergenic |
| CAAATACTGGAAATCAGAGA+AGG | 0.589193 | 1.4:+20265467 | None:intergenic |
| CACTATCATTTGTAGCACCC+CGG | 0.589714 | 1.4:+20266634 | None:intergenic |
| AAAATGGATAATGAATTACT+TGG | 0.594459 | 1.4:-20264089 | MS.gene052855:CDS |
| ATCTCATCAAATCCATACTC+CGG | 0.601315 | 1.4:+20268706 | None:intergenic |
| TGCAACTAGAGAGTTCTTGG+AGG | 0.605522 | 1.4:-20264313 | MS.gene052855:CDS |
| CCATGGTTATGTTCATCACA+AGG | 0.606680 | 1.4:-20268539 | MS.gene052855:intron |
| ACGACGACAGCTTGTCGTTG+GGG | 0.611023 | 1.4:+20269037 | None:intergenic |
| CGGTGCCACCGGAATATCAC+CGG | 0.611595 | 1.4:+20268726 | None:intergenic |
| GCAAAAGTGAAGAATTTAGG+AGG | 0.612288 | 1.4:-20266503 | MS.gene052855:intron |
| CATGACGCAGGATCTGCAGC+GGG | 0.615533 | 1.4:-20265610 | MS.gene052855:CDS |
| TCAAAATGTTTCAATTTCCG+GGG | 0.620972 | 1.4:-20266651 | MS.gene052855:CDS |
| ATAAGAGTAGGATGTCAAGA+AGG | 0.626225 | 1.4:-20265507 | MS.gene052855:CDS |
| ACGACAAGCTGTCGTCGTTG+GGG | 0.626434 | 1.4:-20269032 | MS.gene052855:CDS |
| ATCCATGCTATGATAAGAGT+AGG | 0.628623 | 1.4:-20265519 | MS.gene052855:CDS |
| GATGGTGGAAGTGGAAAAGG+AGG | 0.631276 | 1.4:-20268686 | MS.gene052855:CDS |
| TTGAAGTTGACCTAGAGAAG+AGG | 0.632403 | 1.4:-20264281 | MS.gene052855:CDS |
| CAAAATTGGAGTGAGATGAA+GGG | 0.633095 | 1.4:+20264257 | None:intergenic |
| CCTTGTGATGAACATAACCA+TGG | 0.635178 | 1.4:+20268539 | None:intergenic |
| CCTTTGGCACAAATGACAGA+AGG | 0.637419 | 1.4:-20265359 | MS.gene052855:CDS |
| TAGTGGAATTAAACGCGATG+AGG | 0.643929 | 1.4:-20268807 | MS.gene052855:CDS |
| CACAAATGACAGAAGGCTAG+AGG | 0.644355 | 1.4:-20265352 | MS.gene052855:intron |
| TATCATAGCATGGATGACCA+TGG | 0.646877 | 1.4:+20265527 | None:intergenic |
| CTAAATCAAGCCCAAAAGTG+AGG | 0.651929 | 1.4:-20264374 | MS.gene052855:CDS |
| GTATGGATTTGATGAGATGG+TGG | 0.653882 | 1.4:-20268701 | MS.gene052855:CDS |
| TCTACCGAAAACAACATCAA+CGG | 0.657551 | 1.4:-20269345 | MS.gene052855:CDS |
| CAGGTATGTAAACATGACGC+AGG | 0.659327 | 1.4:-20265622 | MS.gene052855:CDS |
| GGAGTATGGATTTGATGAGA+TGG | 0.666997 | 1.4:-20268704 | MS.gene052855:CDS |
| TGATGAAGATGAAGATTGTG+AGG | 0.673794 | 1.4:-20268606 | MS.gene052855:CDS |
| ACATGACGCAGGATCTGCAG+CGG | 0.677376 | 1.4:-20265611 | MS.gene052855:CDS |
| GCGATGAGGAAGAACGAAGG+CGG | 0.720965 | 1.4:-20268793 | MS.gene052855:CDS |
| AACGCGATGAGGAAGAACGA+AGG | 0.733578 | 1.4:-20268796 | MS.gene052855:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATTCTATAAAAAATTAT+AGG | - | chr1.4:20265182-20265201 | MS.gene052855:intron | 10.0% |
| !! | TATTCAAATTGAATAAATAT+AGG | + | chr1.4:20266064-20266083 | None:intergenic | 10.0% |
| !!! | TACATTTTTAAAAAGTAAAA+GGG | + | chr1.4:20268186-20268205 | None:intergenic | 10.0% |
| !!! | TTACATTTTTAAAAAGTAAA+AGG | + | chr1.4:20268187-20268206 | None:intergenic | 10.0% |
| !!! | TTTTCTTGAAAAAAAAAAAT+AGG | - | chr1.4:20265632-20265651 | MS.gene052855:intron | 10.0% |
| !! | ATATAATGAAAAAACATGTT+TGG | - | chr1.4:20268321-20268340 | MS.gene052855:intron | 15.0% |
| !! | CTATTACTTAAAAAACATAT+TGG | + | chr1.4:20266645-20266664 | None:intergenic | 15.0% |
| !! | TAAAAGAAATATTTAATGGA+CGG | - | chr1.4:20265127-20265146 | MS.gene052855:intron | 15.0% |
| !! | TAGTAATTTATATTATTTGC+AGG | - | chr1.4:20269255-20269274 | MS.gene052855:CDS | 15.0% |
| !!! | AAAATAATATTTGACTGTTT+TGG | - | chr1.4:20265053-20265072 | MS.gene052855:intron | 15.0% |
| !!! | AACACTAGTTTAATTTTATT+TGG | + | chr1.4:20268494-20268513 | None:intergenic | 15.0% |
| !!! | AATGTAATAATTTTTTTCCT+TGG | - | chr1.4:20268200-20268219 | MS.gene052855:intron | 15.0% |
| !!! | ATTTTCTTTAAAAAGAATAG+AGG | + | chr1.4:20267569-20267588 | None:intergenic | 15.0% |
| !!! | TGTGTTTCAATATTAAATTT+TGG | - | chr1.4:20268081-20268100 | MS.gene052855:intron | 15.0% |
| !!! | TTTGTTGTTTTTGTTTTTTT+TGG | - | chr1.4:20264923-20264942 | MS.gene052855:intron | 15.0% |
| !!! | TTTTTTTTCAAGAAAAGAAA+AGG | + | chr1.4:20265628-20265647 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTGGTACAA+TGG | - | chr1.4:20264957-20264976 | MS.gene052855:intron | 15.0% |
| !! | AAAAAATATAAGTTGCAAAC+TGG | + | chr1.4:20267448-20267467 | None:intergenic | 20.0% |
| !! | AAAATGGATAATGAATTACT+TGG | - | chr1.4:20269313-20269332 | MS.gene052855:CDS | 20.0% |
| !! | ATGAATATACGAAAAACAAA+AGG | + | chr1.4:20268799-20268818 | None:intergenic | 20.0% |
| !! | ATTATATAATACATGTCGAA+AGG | + | chr1.4:20267655-20267674 | None:intergenic | 20.0% |
| !! | CATTCAATAAATAATGTATG+TGG | + | chr1.4:20265354-20265373 | None:intergenic | 20.0% |
| !! | CTTAAAAATTCAATGCAAAT+TGG | + | chr1.4:20265818-20265837 | None:intergenic | 20.0% |
| !! | TAACTAAAATTCTAGATTCT+AGG | + | chr1.4:20268230-20268249 | None:intergenic | 20.0% |
| !! | TACAAGAAGAAAATTAATCA+AGG | + | chr1.4:20266669-20266688 | None:intergenic | 20.0% |
| !! | TCAATCAAACATATATCAAT+TGG | + | chr1.4:20265494-20265513 | None:intergenic | 20.0% |
| !! | TGAATATACGAAAAACAAAA+GGG | + | chr1.4:20268798-20268817 | None:intergenic | 20.0% |
| !! | TTATATAATACATGTCGAAA+GGG | + | chr1.4:20267654-20267673 | None:intergenic | 20.0% |
| !!! | AAAAGAAAAGGCTAAAATTT+TGG | + | chr1.4:20265616-20265635 | None:intergenic | 20.0% |
| !!! | ATAAATGTTTTCCATTTTCA+AGG | + | chr1.4:20265700-20265719 | None:intergenic | 20.0% |
| !!! | GAGTATTTTTTAACAATCTT+AGG | - | chr1.4:20265415-20265434 | MS.gene052855:CDS | 20.0% |
| !!! | TGAAAGTGTTTTTTTTGTAA+CGG | + | chr1.4:20264091-20264110 | None:intergenic | 20.0% |
| !!! | TGATTAATTTTCTTCTTGTA+GGG | - | chr1.4:20266669-20266688 | MS.gene052855:CDS | 20.0% |
| !!! | TTGAAACATTTTGAGATAAA+CGG | + | chr1.4:20266745-20266764 | None:intergenic | 20.0% |
| !!! | TTGATTAATTTTCTTCTTGT+AGG | - | chr1.4:20266668-20266687 | MS.gene052855:CDS | 20.0% |
| !!! | TTTTAGTTGACATTTTGATT+TGG | - | chr1.4:20265003-20265022 | MS.gene052855:intron | 20.0% |
| !!! | TTTTTTGGTAATCAAGTTAT+TGG | + | chr1.4:20268423-20268442 | None:intergenic | 20.0% |
| ! | AAAGAAAATTTGATTGAGTG+AGG | - | chr1.4:20265521-20265540 | MS.gene052855:CDS | 25.0% |
| ! | AAATAGTTATCGCACTTTAT+GGG | + | chr1.4:20268880-20268899 | None:intergenic | 25.0% |
| ! | AAATCACAAAAACTTTGCAT+TGG | - | chr1.4:20266200-20266219 | MS.gene052855:intron | 25.0% |
| ! | AATCTTTCTCAAAATCCTTA+GGG | + | chr1.4:20268132-20268151 | None:intergenic | 25.0% |
| ! | AATGAAAAAACATGTTTGGA+AGG | - | chr1.4:20268325-20268344 | MS.gene052855:intron | 25.0% |
| ! | ACATGTTAAGATACATGTTA+AGG | + | chr1.4:20265590-20265609 | None:intergenic | 25.0% |
| ! | ATAGTGATGAAAAAGTTCAA+AGG | - | chr1.4:20265076-20265095 | MS.gene052855:intron | 25.0% |
| ! | ATGAAAAAACATGTTTGGAA+GGG | - | chr1.4:20268326-20268345 | MS.gene052855:intron | 25.0% |
| ! | ATGAAAGAAATGTGGTAAAA+TGG | - | chr1.4:20269297-20269316 | MS.gene052855:CDS | 25.0% |
| ! | CAAGTTAGAACTAACATATA+AGG | + | chr1.4:20267122-20267141 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr1.4:20265315-20265334 | MS.gene052855:intron | 25.0% |
| ! | CTTAATTACCACTTCAAAAT+TGG | + | chr1.4:20269162-20269181 | None:intergenic | 25.0% |
| ! | GGTCAATTATAGTAATTCAA+GGG | + | chr1.4:20268473-20268492 | None:intergenic | 25.0% |
| ! | GTAAATCTTATTGTCTATCA+CGG | - | chr1.4:20266929-20266948 | MS.gene052855:intron | 25.0% |
| ! | GTATATTCATTCTATTGAAC+CGG | - | chr1.4:20268809-20268828 | MS.gene052855:CDS | 25.0% |
| ! | TAACTTGATTACCAAAAAAC+AGG | - | chr1.4:20268424-20268443 | MS.gene052855:intron | 25.0% |
| ! | TAATTGCATGAAGCTAAATT+TGG | + | chr1.4:20267341-20267360 | None:intergenic | 25.0% |
| ! | TCGTTAGAGAAACATAATTT+AGG | + | chr1.4:20266488-20266507 | None:intergenic | 25.0% |
| ! | TCTCAAAATGTTTCAATTTC+CGG | - | chr1.4:20266749-20266768 | MS.gene052855:intron | 25.0% |
| ! | TCTCATACAAGAATTATGAT+TGG | - | chr1.4:20269393-20269412 | MS.gene052855:CDS | 25.0% |
| ! | TGAATTAGAGAAGAAATTGA+TGG | - | chr1.4:20264632-20264651 | MS.gene052855:intron | 25.0% |
| ! | TGGTCAATTATAGTAATTCA+AGG | + | chr1.4:20268474-20268493 | None:intergenic | 25.0% |
| ! | TTGTCACATTCATTATTTGA+CGG | - | chr1.4:20266338-20266357 | MS.gene052855:intron | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | - | chr1.4:20265389-20265408 | MS.gene052855:CDS | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | + | chr1.4:20265408-20265389 | None:intergenic | 25.0% |
| !! | ACATTCTGCTATTGATAATA+TGG | - | chr1.4:20268911-20268930 | MS.gene052855:CDS | 25.0% |
| !! | ATTTCATTCAAGTTTAGCTT+AGG | + | chr1.4:20267699-20267718 | None:intergenic | 25.0% |
| !! | GTGAGTCAACTAAAATTTTA+GGG | + | chr1.4:20268451-20268470 | None:intergenic | 25.0% |
| !! | TTTTTGCTAATGTGTAAAGT+AGG | + | chr1.4:20265154-20265173 | None:intergenic | 25.0% |
| !!! | AAAGTGATTTTTCAAAATGC+AGG | - | chr1.4:20267761-20267780 | MS.gene052855:intron | 25.0% |
| !!! | AATGTTTTTAAGTGTGTGAT+TGG | + | chr1.4:20266266-20266285 | None:intergenic | 25.0% |
| !!! | AGTTACTACTACTTTTAAAC+CGG | + | chr1.4:20264337-20264356 | None:intergenic | 25.0% |
| !!! | ATTTTGTTACTTCTGATATG+AGG | - | chr1.4:20267723-20267742 | MS.gene052855:intron | 25.0% |
| !!! | GAAAGTGTTTTTTTTGTAAC+GGG | + | chr1.4:20264090-20264109 | None:intergenic | 25.0% |
| !!! | GTAATAATTTTTTTCCTTGG+TGG | - | chr1.4:20268203-20268222 | MS.gene052855:intron | 25.0% |
| !!! | TTTGAGTTGTTTTTGTTGTT+GGG | + | chr1.4:20264029-20264048 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTGTTTTTGTTGT+TGG | + | chr1.4:20264030-20264049 | None:intergenic | 25.0% |
| !!! | TTTTGGAAATGAAAGAAATG+TGG | - | chr1.4:20269289-20269308 | MS.gene052855:CDS | 25.0% |
| AAAGAAATGCAGAGAATAAC+AGG | - | chr1.4:20267192-20267211 | MS.gene052855:intron | 30.0% | |
| AAATTGATGGAAATTGCGAA+TGG | - | chr1.4:20264645-20264664 | MS.gene052855:intron | 30.0% | |
| AAGAAAATACCTGAATTTGC+CGG | - | chr1.4:20267581-20267600 | MS.gene052855:intron | 30.0% | |
| AATGTGGATGAATGAAATGA+AGG | - | chr1.4:20267073-20267092 | MS.gene052855:intron | 30.0% | |
| AGGTTTCAAAAGTAGGTTAT+AGG | + | chr1.4:20267630-20267649 | None:intergenic | 30.0% | |
| ATCTCCATCAAAAAATTGTG+AGG | + | chr1.4:20265563-20265582 | None:intergenic | 30.0% | |
| ATGAATCCTTTGATTCACTT+TGG | - | chr1.4:20268991-20269010 | MS.gene052855:CDS | 30.0% | |
| ATGTGGATGAATGAAATGAA+GGG | - | chr1.4:20267074-20267093 | MS.gene052855:intron | 30.0% | |
| ATTCACTTTGGACTTTGTAA+TGG | - | chr1.4:20269003-20269022 | MS.gene052855:CDS | 30.0% | |
| CAATCTTTCTCAAAATCCTT+AGG | + | chr1.4:20268133-20268152 | None:intergenic | 30.0% | |
| CACATGACATATGTTACATT+TGG | + | chr1.4:20265454-20265473 | None:intergenic | 30.0% | |
| CTCAAAATGTTTCAATTTCC+GGG | - | chr1.4:20266750-20266769 | MS.gene052855:intron | 30.0% | |
| GAAATAGTTATCGCACTTTA+TGG | + | chr1.4:20268881-20268900 | None:intergenic | 30.0% | |
| GTCACAGAATTTAATGTGTT+CGG | - | chr1.4:20266304-20266323 | MS.gene052855:intron | 30.0% | |
| TCAAAATGTTTCAATTTCCG+GGG | - | chr1.4:20266751-20266770 | MS.gene052855:intron | 30.0% | |
| TCAACTCACAGAAAATTTGA+AGG | + | chr1.4:20268520-20268539 | None:intergenic | 30.0% | |
| TCAGCAAAAGTGAAGAATTT+AGG | - | chr1.4:20266896-20266915 | MS.gene052855:intron | 30.0% | |
| TCATTCCAAAACAAATGCTT+AGG | - | chr1.4:20266530-20266549 | MS.gene052855:CDS | 30.0% | |
| TCTGATTTCCAGTATTTGAT+TGG | - | chr1.4:20267940-20267959 | MS.gene052855:intron | 30.0% | |
| TGAAAAAACATGTTTGGAAG+GGG | - | chr1.4:20268327-20268346 | MS.gene052855:intron | 30.0% | |
| TGTCACATTCATTATTTGAC+GGG | - | chr1.4:20266339-20266358 | MS.gene052855:intron | 30.0% | |
| TTCAAGGGAATGTTATAATC+TGG | - | chr1.4:20268640-20268659 | MS.gene052855:CDS | 30.0% | |
| TTCATCAACCTATCTTGAAT+CGG | + | chr1.4:20264783-20264802 | None:intergenic | 30.0% | |
| TTCTTGTATGAGATATGAAC+AGG | + | chr1.4:20269386-20269405 | None:intergenic | 30.0% | |
| TTGTCGTTGAAGAAAATCAT+TGG | + | chr1.4:20264561-20264580 | None:intergenic | 30.0% | |
| TTGTTAAAAAATACTCCCTC+CGG | + | chr1.4:20265411-20265430 | None:intergenic | 30.0% | |
| TTTCATTCATCCACATTTCT+CGG | + | chr1.4:20267070-20267089 | None:intergenic | 30.0% | |
| ! | AAAATTTTCCGGTGATATTC+CGG | - | chr1.4:20264668-20264687 | MS.gene052855:intron | 30.0% |
| ! | AAACTTTGCATTGGTAATCT+CGG | - | chr1.4:20266209-20266228 | MS.gene052855:intron | 30.0% |
| ! | AACATATTGGTAGCTTTCTT+TGG | + | chr1.4:20266632-20266651 | None:intergenic | 30.0% |
| ! | ATTGCGAATGGAAAATTTTC+CGG | - | chr1.4:20264657-20264676 | MS.gene052855:intron | 30.0% |
| ! | GGTGAGTCAACTAAAATTTT+AGG | + | chr1.4:20268452-20268471 | None:intergenic | 30.0% |
| ! | TTATTTTCTTACCCGAAAAC+AGG | + | chr1.4:20266600-20266619 | None:intergenic | 30.0% |
| ! | TTTTCTTCTTGTAGGGAAAA+TGG | - | chr1.4:20266676-20266695 | MS.gene052855:CDS | 30.0% |
| !! | AAATTCTTCACTTTTGCTGA+TGG | + | chr1.4:20266896-20266915 | None:intergenic | 30.0% |
| !! | GTGAAAAAAACCTCACTTTT+GGG | + | chr1.4:20269041-20269060 | None:intergenic | 30.0% |
| !! | TTTTAGTTACCAACGTTACA+TGG | - | chr1.4:20268241-20268260 | MS.gene052855:intron | 30.0% |
| !!! | AAGAAAGTTTTGAGTGTTGA+TGG | + | chr1.4:20264189-20264208 | None:intergenic | 30.0% |
| !!! | AATTTTAGGGTCCTGTTTTT+TGG | + | chr1.4:20268438-20268457 | None:intergenic | 30.0% |
| !!! | AGAAAGTTTTGAGTGTTGAT+GGG | + | chr1.4:20264188-20264207 | None:intergenic | 30.0% |
| !!! | ATTGTGAGGAATTGTTTTGA+TGG | - | chr1.4:20264810-20264829 | MS.gene052855:intron | 30.0% |
| !!! | TTGTTTTGATGGAAGTGAAT+TGG | - | chr1.4:20264821-20264840 | MS.gene052855:intron | 30.0% |
| AAAGAGCTGAAACAAAGAAC+TGG | - | chr1.4:20264516-20264535 | MS.gene052855:intron | 35.0% | |
| AAAGGGAAATACACGATGTT+TGG | + | chr1.4:20268781-20268800 | None:intergenic | 35.0% | |
| AAAGGGAAGGTTTCAAAAGT+AGG | + | chr1.4:20267637-20267656 | None:intergenic | 35.0% | |
| AAGAAATTAACTACTCCCTC+CGG | - | chr1.4:20265258-20265277 | MS.gene052855:intron | 35.0% | |
| AAGAACCTTATTGCTGATAC+CGG | + | chr1.4:20267603-20267622 | None:intergenic | 35.0% | |
| AATTGGACCAAATCCATTGT+TGG | + | chr1.4:20265477-20265496 | None:intergenic | 35.0% | |
| AGATAAACGGTTCATGTTCA+AGG | + | chr1.4:20266732-20266751 | None:intergenic | 35.0% | |
| AGGGAATGTTATAATCTGGA+CGG | - | chr1.4:20268644-20268663 | MS.gene052855:CDS | 35.0% | |
| AGTGAAGAATTTAGGAGGTA+TGG | - | chr1.4:20266904-20266923 | MS.gene052855:intron | 35.0% | |
| ATAAGAGTAGGATGTCAAGA+AGG | - | chr1.4:20267895-20267914 | MS.gene052855:intron | 35.0% | |
| ATAATACATGTCGAAAGGGA+AGG | + | chr1.4:20267650-20267669 | None:intergenic | 35.0% | |
| ATCCATGCTATGATAAGAGT+AGG | - | chr1.4:20267883-20267902 | MS.gene052855:intron | 35.0% | |
| ATCCTACTCTTATCATAGCA+TGG | + | chr1.4:20267888-20267907 | None:intergenic | 35.0% | |
| ATCTCATCAAATCCATACTC+CGG | + | chr1.4:20264699-20264718 | None:intergenic | 35.0% | |
| CAAAATTGGAGTGAGATGAA+GGG | + | chr1.4:20269148-20269167 | None:intergenic | 35.0% | |
| CAAAGTCCAAAGTGAATCAA+AGG | + | chr1.4:20269000-20269019 | None:intergenic | 35.0% | |
| CAAATACTGGAAATCAGAGA+AGG | + | chr1.4:20267938-20267957 | None:intergenic | 35.0% | |
| CGTGTAGTGAAAACTAAGAT+TGG | + | chr1.4:20267494-20267513 | None:intergenic | 35.0% | |
| CTAATCTCTGTCAGAAAACA+TGG | + | chr1.4:20268375-20268394 | None:intergenic | 35.0% | |
| CTTAAACTTGTACAATGCCA+TGG | - | chr1.4:20267858-20267877 | MS.gene052855:intron | 35.0% | |
| GAGGATACCATTTGTAATAG+TGG | + | chr1.4:20267986-20268005 | None:intergenic | 35.0% | |
| GATTTCCAGTATTTGATTGG+AGG | - | chr1.4:20267943-20267962 | MS.gene052855:intron | 35.0% | |
| GCAAAAGTGAAGAATTTAGG+AGG | - | chr1.4:20266899-20266918 | MS.gene052855:intron | 35.0% | |
| GCTATGTATAGAACATGTCA+AGG | - | chr1.4:20267154-20267173 | MS.gene052855:intron | 35.0% | |
| GTAATAGTGGCAAGAGAATA+AGG | + | chr1.4:20267973-20267992 | None:intergenic | 35.0% | |
| GTCACATTCATTATTTGACG+GGG | - | chr1.4:20266340-20266359 | MS.gene052855:intron | 35.0% | |
| TACTTGGATGCAAATAAAGC+TGG | - | chr1.4:20269329-20269348 | MS.gene052855:CDS | 35.0% | |
| TATGGACATTGAATACGAGA+CGG | + | chr1.4:20267025-20267044 | None:intergenic | 35.0% | |
| TCAAAATTGGAGTGAGATGA+AGG | + | chr1.4:20269149-20269168 | None:intergenic | 35.0% | |
| TCTACCGAAAACAACATCAA+CGG | - | chr1.4:20264057-20264076 | MS.gene052855:CDS | 35.0% | |
| TCTCTTGCCACTATTACAAA+TGG | - | chr1.4:20267976-20267995 | MS.gene052855:intron | 35.0% | |
| TGATGAAGATGAAGATTGTG+AGG | - | chr1.4:20264796-20264815 | MS.gene052855:intron | 35.0% | |
| TTACACGTTAGTGTCACATA+CGG | - | chr1.4:20267389-20267408 | MS.gene052855:intron | 35.0% | |
| TTCTTCAACGACAAGCTAAT+CGG | - | chr1.4:20264567-20264586 | MS.gene052855:intron | 35.0% | |
| TTGATGGGATTGTTTCGTTT+GGG | + | chr1.4:20264173-20264192 | None:intergenic | 35.0% | |
| ! | AACAGCCTAAGCATTTGTTT+TGG | + | chr1.4:20266538-20266557 | None:intergenic | 35.0% |
| ! | ACATTTGTTGCCTTATGAGT+CGG | - | chr1.4:20268106-20268125 | MS.gene052855:intron | 35.0% |
| ! | AGAAGCATAAGACTCAAGTA+TGG | + | chr1.4:20266845-20266864 | None:intergenic | 35.0% |
| ! | AGATAGTGACTTGTGTTTCA+AGG | + | chr1.4:20267300-20267319 | None:intergenic | 35.0% |
| ! | AGTCTTATGCTTCTGAAGAT+AGG | - | chr1.4:20266851-20266870 | MS.gene052855:CDS | 35.0% |
| ! | CGATGTTTGGTAACAAAGTT+TGG | + | chr1.4:20268768-20268787 | None:intergenic | 35.0% |
| ! | GGTGAAAAAAACCTCACTTT+TGG | + | chr1.4:20269042-20269061 | None:intergenic | 35.0% |
| ! | GTCAAGAAGGTGTAATCAAT+AGG | - | chr1.4:20267908-20267927 | MS.gene052855:intron | 35.0% |
| ! | TAGGAGACATGTTGATTATG+TGG | - | chr1.4:20266870-20266889 | MS.gene052855:intron | 35.0% |
| ! | TTTTAACGATGTGATGGTTC+GGG | + | chr1.4:20264247-20264266 | None:intergenic | 35.0% |
| !! | AGAGATTACCGATTCAAGAT+AGG | - | chr1.4:20264772-20264791 | MS.gene052855:intron | 35.0% |
| !! | ATCTCACTCCAATTTTGAAG+TGG | - | chr1.4:20269151-20269170 | MS.gene052855:CDS | 35.0% |
| !! | GGGGAATGAATGTTTGATTT+TGG | - | chr1.4:20267517-20267536 | MS.gene052855:intron | 35.0% |
| !! | GTTTTAACGATGTGATGGTT+CGG | + | chr1.4:20264248-20264267 | None:intergenic | 35.0% |
| !! | TTAGTTTTCACTACACGACT+GGG | - | chr1.4:20267497-20267516 | MS.gene052855:intron | 35.0% |
| !! | TTGTAGGGAAAATGGTTTTG+AGG | - | chr1.4:20266684-20266703 | MS.gene052855:CDS | 35.0% |
| !!! | GTTACCGTTGATGTTGTTTT+CGG | + | chr1.4:20264064-20264083 | None:intergenic | 35.0% |
| !!! | GTTGTTTTTGTTGTTGGGTT+CGG | + | chr1.4:20264024-20264043 | None:intergenic | 35.0% |
| !!! | TGAGTGTTTTAACGATGTGA+TGG | + | chr1.4:20264253-20264272 | None:intergenic | 35.0% |
| !!! | TGTGCCTCACAATTTTTTGA+TGG | - | chr1.4:20265556-20265575 | MS.gene052855:CDS | 35.0% |
| !!! | TTGTTTTTGTTGTTGGGTTC+GGG | + | chr1.4:20264023-20264042 | None:intergenic | 35.0% |
| AAAGGAGGATGAGATAGTGA+AGG | - | chr1.4:20264731-20264750 | MS.gene052855:intron | 40.0% | |
| AACAAATGCTTAGGCTGTTG+AGG | - | chr1.4:20266539-20266558 | MS.gene052855:CDS | 40.0% | |
| AACTCTTCAGCAACTCTACA+AGG | + | chr1.4:20269063-20269082 | None:intergenic | 40.0% | |
| AAGGGCTTGACTAAGGAATA+AGG | + | chr1.4:20268027-20268046 | None:intergenic | 40.0% | |
| ACAAGCTGACACCTTGAAAA+TGG | - | chr1.4:20265686-20265705 | MS.gene052855:intron | 40.0% | |
| ACAGATCATTACTGCGTTGT+CGG | + | chr1.4:20264212-20264231 | None:intergenic | 40.0% | |
| ACTGTCATAACTGCTAGTGA+TGG | - | chr1.4:20267222-20267241 | MS.gene052855:intron | 40.0% | |
| AGTTACCAACGTTACATGGT+CGG | - | chr1.4:20268245-20268264 | MS.gene052855:intron | 40.0% | |
| ATGTGCAACTAGAGAGTTCT+TGG | - | chr1.4:20269086-20269105 | MS.gene052855:CDS | 40.0% | |
| ATTTGCCGGTATCAGCAATA+AGG | - | chr1.4:20267595-20267614 | MS.gene052855:intron | 40.0% | |
| CACTAGCAGTTATGACAGTT+AGG | + | chr1.4:20267221-20267240 | None:intergenic | 40.0% | |
| CAGCTTCTTGTAAGAAACCA+TGG | - | chr1.4:20264846-20264865 | MS.gene052855:intron | 40.0% | |
| CATATGTCATGTGCCAACAA+TGG | - | chr1.4:20265461-20265480 | MS.gene052855:CDS | 40.0% | |
| CCATGGTTATGTTCATCACA+AGG | - | chr1.4:20264863-20264882 | MS.gene052855:intron | 40.0% | |
| CCTTGTGATGAACATAACCA+TGG | + | chr1.4:20264866-20264885 | None:intergenic | 40.0% | |
| CGACGATAAAAATGACTCGT+CGG | - | chr1.4:20264275-20264294 | MS.gene052855:CDS | 40.0% | |
| CTAAATCAAGCCCAAAAGTG+AGG | - | chr1.4:20269028-20269047 | MS.gene052855:CDS | 40.0% | |
| GATAAAAATGACTCGTCGGT+TGG | - | chr1.4:20264279-20264298 | MS.gene052855:CDS | 40.0% | |
| GATAAGGTAGAAGTTCCGTT+TGG | - | chr1.4:20266167-20266186 | MS.gene052855:intron | 40.0% | |
| GATGTCCTCCAATCAAATAC+TGG | + | chr1.4:20267951-20267970 | None:intergenic | 40.0% | |
| GATTTCAAGAAGCGACCAAA+CGG | + | chr1.4:20266185-20266204 | None:intergenic | 40.0% | |
| GCATGAAGCTAAATTTGGCA+TGG | + | chr1.4:20267336-20267355 | None:intergenic | 40.0% | |
| GGAGTATGGATTTGATGAGA+TGG | - | chr1.4:20264698-20264717 | MS.gene052855:intron | 40.0% | |
| GGTATCAGCAATAAGGTTCT+TGG | - | chr1.4:20267602-20267621 | MS.gene052855:intron | 40.0% | |
| GTATGGATTTGATGAGATGG+TGG | - | chr1.4:20264701-20264720 | MS.gene052855:intron | 40.0% | |
| GTCACAACTCAACAAACGTT+CGG | + | chr1.4:20268577-20268596 | None:intergenic | 40.0% | |
| TAGTGGAATTAAACGCGATG+AGG | - | chr1.4:20264595-20264614 | MS.gene052855:intron | 40.0% | |
| TATCATAGCATGGATGACCA+TGG | + | chr1.4:20267878-20267897 | None:intergenic | 40.0% | |
| TATTCCTTAGTCAAGCCCTT+TGG | - | chr1.4:20268027-20268046 | MS.gene052855:intron | 40.0% | |
| TCACAACTCAACAAACGTTC+GGG | + | chr1.4:20268576-20268595 | None:intergenic | 40.0% | |
| TGATGGGATTGTTTCGTTTG+GGG | + | chr1.4:20264172-20264191 | None:intergenic | 40.0% | |
| TGCAAACTACCTATGAGCTA+TGG | + | chr1.4:20267256-20267275 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr1.4:20265393-20265412 | MS.gene052855:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr1.4:20265412-20265393 | None:intergenic | 40.0% | |
| TTCAATGTCCATATCTGTGC+TGG | - | chr1.4:20267032-20267051 | MS.gene052855:intron | 40.0% | |
| TTGAAGTTGACCTAGAGAAG+AGG | - | chr1.4:20269121-20269140 | MS.gene052855:CDS | 40.0% | |
| TTGACACATCTCTTAGCTGA+TGG | - | chr1.4:20269356-20269375 | MS.gene052855:CDS | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr1.4:20265392-20265411 | MS.gene052855:CDS | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr1.4:20265411-20265392 | None:intergenic | 40.0% | |
| TTTCTTACCCGAAAACAGGA+TGG | + | chr1.4:20266596-20266615 | None:intergenic | 40.0% | |
| ! | AACCGGAGTTGTTGTTCTAA+CGG | - | chr1.4:20268826-20268845 | MS.gene052855:CDS | 40.0% |
| ! | ACGTTTGTTGAGTTGTGACT+TGG | - | chr1.4:20268578-20268597 | MS.gene052855:CDS | 40.0% |
| ! | ACTTCATCCATCCTGTTTTC+GGG | - | chr1.4:20266586-20266605 | MS.gene052855:CDS | 40.0% |
| ! | CACTTCATCCATCCTGTTTT+CGG | - | chr1.4:20266585-20266604 | MS.gene052855:CDS | 40.0% |
| ! | CGTTTGTTGAGTTGTGACTT+GGG | - | chr1.4:20268579-20268598 | MS.gene052855:CDS | 40.0% |
| ! | CTTCTGTCATTTGTGCCAAA+GGG | + | chr1.4:20268045-20268064 | None:intergenic | 40.0% |
| ! | GTTGATGGGATTGTTTCGTT+TGG | + | chr1.4:20264174-20264193 | None:intergenic | 40.0% |
| ! | GTTTGTTGAGTTGTGACTTG+GGG | - | chr1.4:20268580-20268599 | MS.gene052855:CDS | 40.0% |
| ! | TAGTTTTCACTACACGACTG+GGG | - | chr1.4:20267498-20267517 | MS.gene052855:intron | 40.0% |
| ! | TCATGTGCCAACAATGGATT+TGG | - | chr1.4:20265467-20265486 | MS.gene052855:CDS | 40.0% |
| ! | TTCAGCTCTTTTTCTCTCTC+TGG | + | chr1.4:20264507-20264526 | None:intergenic | 40.0% |
| !! | ATTTGATGAGATGGTGGAAG+TGG | - | chr1.4:20264707-20264726 | MS.gene052855:intron | 40.0% |
| !! | CTTAGTTTTCACTACACGAC+TGG | - | chr1.4:20267496-20267515 | MS.gene052855:intron | 40.0% |
| !! | TGTGTGATTGGTTGCACTTT+TGG | + | chr1.4:20266254-20266273 | None:intergenic | 40.0% |
| !!! | AGGGAAAATGGTTTTGAGGA+GGG | - | chr1.4:20266688-20266707 | MS.gene052855:CDS | 40.0% |
| !!! | TAGGGAAAATGGTTTTGAGG+AGG | - | chr1.4:20266687-20266706 | MS.gene052855:CDS | 40.0% |
| !!! | TGCAGGTACAGTGTTGATTT+TGG | - | chr1.4:20269272-20269291 | MS.gene052855:CDS | 40.0% |
| AACCCAGATGAACGGTTCAA+GGG | - | chr1.4:20268625-20268644 | MS.gene052855:CDS | 45.0% | |
| AATGCTTAGGCTGTTGAGGT+TGG | - | chr1.4:20266543-20266562 | MS.gene052855:CDS | 45.0% | |
| ACACATCTCTTAGCTGATGG+TGG | - | chr1.4:20269359-20269378 | MS.gene052855:CDS | 45.0% | |
| ACGGCGAGATTTCGTTGATA+AGG | - | chr1.4:20266151-20266170 | MS.gene052855:intron | 45.0% | |
| AGAGAGTTCTTGGAGGATGA+TGG | - | chr1.4:20269096-20269115 | MS.gene052855:CDS | 45.0% | |
| AGGGGAAATTCCACAATAGG+TGG | - | chr1.4:20268345-20268364 | MS.gene052855:intron | 45.0% | |
| AGTAAAAGGGTCATGCATGC+AGG | + | chr1.4:20268173-20268192 | None:intergenic | 45.0% | |
| ATGGGATTGTTTCGTTTGGG+GGG | + | chr1.4:20264170-20264189 | None:intergenic | 45.0% | |
| ATGGTCGGTCTTACTAGAAC+TGG | - | chr1.4:20268260-20268279 | MS.gene052855:intron | 45.0% | |
| ATGTCAAGGTGCACGATACA+AGG | - | chr1.4:20267168-20267187 | MS.gene052855:intron | 45.0% | |
| ATTCCCTTGAACCGTTCATC+TGG | + | chr1.4:20268631-20268650 | None:intergenic | 45.0% | |
| CACAAATGACAGAAGGCTAG+AGG | - | chr1.4:20268050-20268069 | MS.gene052855:intron | 45.0% | |
| CACTATCATTTGTAGCACCC+CGG | + | chr1.4:20266771-20266790 | None:intergenic | 45.0% | |
| CAGGTATGTAAACATGACGC+AGG | - | chr1.4:20267780-20267799 | MS.gene052855:intron | 45.0% | |
| CCTTTGGCACAAATGACAGA+AGG | - | chr1.4:20268043-20268062 | MS.gene052855:intron | 45.0% | |
| GATGGGATTGTTTCGTTTGG+GGG | + | chr1.4:20264171-20264190 | None:intergenic | 45.0% | |
| GGAAGGGGAAATTCCACAAT+AGG | - | chr1.4:20268342-20268361 | MS.gene052855:intron | 45.0% | |
| GTGACAGAGTTCAATCTCTC+CGG | - | chr1.4:20264315-20264334 | MS.gene052855:CDS | 45.0% | |
| GTGATCTTCGATTGCTTCTG+AGG | + | chr1.4:20268005-20268024 | None:intergenic | 45.0% | |
| GTGGAAATGCGGAAATCTCA+CGG | + | chr1.4:20266125-20266144 | None:intergenic | 45.0% | |
| TAAGACCGACCATGTAACGT+TGG | + | chr1.4:20268253-20268272 | None:intergenic | 45.0% | |
| TCCGCATTTCCACAGAATCA+CGG | - | chr1.4:20266132-20266151 | MS.gene052855:intron | 45.0% | |
| TCTAGATTCTAGGTCCACCA+AGG | + | chr1.4:20268220-20268239 | None:intergenic | 45.0% | |
| TGCAACTAGAGAGTTCTTGG+AGG | - | chr1.4:20269089-20269108 | MS.gene052855:CDS | 45.0% | |
| TTCAACGACAAGCTAATCGG+TGG | - | chr1.4:20264570-20264589 | MS.gene052855:intron | 45.0% | |
| TTCCCTTGAACCGTTCATCT+GGG | + | chr1.4:20268630-20268649 | None:intergenic | 45.0% | |
| TTGAACCGTTCATCTGGGTT+GGG | + | chr1.4:20268625-20268644 | None:intergenic | 45.0% | |
| TTGCTGATACCGGCAAATTC+AGG | + | chr1.4:20267593-20267612 | None:intergenic | 45.0% | |
| ! | ATTTTCCGGTGATATTCCGG+TGG | - | chr1.4:20264671-20264690 | MS.gene052855:intron | 45.0% |
| ! | CATAACTGCTAGTGATGGTG+TGG | - | chr1.4:20267227-20267246 | MS.gene052855:intron | 45.0% |
| ! | CCTTCTGTCATTTGTGCCAA+AGG | + | chr1.4:20268046-20268065 | None:intergenic | 45.0% |
| ! | GAATTTGAAACAGGGGGTGT+TGG | + | chr1.4:20264144-20264163 | None:intergenic | 45.0% |
| ! | GGGGGTGTGAATTTGAAACA+GGG | + | chr1.4:20264152-20264171 | None:intergenic | 45.0% |
| ! | GGGGTGTGAATTTGAAACAG+GGG | + | chr1.4:20264151-20264170 | None:intergenic | 45.0% |
| ! | GGGTGTGAATTTGAAACAGG+GGG | + | chr1.4:20264150-20264169 | None:intergenic | 45.0% |
| ! | TTCAAGGTGTCAGCTTGTGT+AGG | + | chr1.4:20265684-20265703 | None:intergenic | 45.0% |
| !! | CAAGCTAATCGGTGGATTAG+TGG | - | chr1.4:20264578-20264597 | MS.gene052855:intron | 45.0% |
| !! | CTTGGTTCTACCGAGAAATG+TGG | - | chr1.4:20267057-20267076 | MS.gene052855:intron | 45.0% |
| !! | GTGATTGGTTGCACTTTTGG+TGG | + | chr1.4:20266251-20266270 | None:intergenic | 45.0% |
| !! | TGAGATGGTGGAAGTGGAAA+AGG | - | chr1.4:20264713-20264732 | MS.gene052855:intron | 45.0% |
| !!! | AAACAGGGGGTGTTGGTTTT+GGG | + | chr1.4:20264137-20264156 | None:intergenic | 45.0% |
| !!! | GGTTTTGGGAGAAGTGAATG+AGG | + | chr1.4:20264123-20264142 | None:intergenic | 45.0% |
| !! | AATTTAAAAGAAATATTTAA+TGG | - | chr1.4:20265123-20265142 | MS.gene052855:intron | 5.0% |
| !!! | TTTAAGTTTTTTTTTTTTTT+TGG | - | chr1.4:20264949-20264968 | MS.gene052855:intron | 5.0% |
| AACGACAAGCTGTCGTCGTT+GGG | - | chr1.4:20264369-20264388 | MS.gene052855:CDS | 50.0% | |
| AACGACGACAGCTTGTCGTT+GGG | + | chr1.4:20264369-20264388 | None:intergenic | 50.0% | |
| AACGCGATGAGGAAGAACGA+AGG | - | chr1.4:20264606-20264625 | MS.gene052855:intron | 50.0% | |
| ACAAGCCCAACCCAGATGAA+CGG | - | chr1.4:20268617-20268636 | MS.gene052855:CDS | 50.0% | |
| ACATGGCTGACCACCTATTG+TGG | + | chr1.4:20268358-20268377 | None:intergenic | 50.0% | |
| ACCAAGCACCAGCACAGATA+TGG | + | chr1.4:20267043-20267062 | None:intergenic | 50.0% | |
| CAACCCAGATGAACGGTTCA+AGG | - | chr1.4:20268624-20268643 | MS.gene052855:CDS | 50.0% | |
| CGCCGTTAGAACAACAACTC+CGG | + | chr1.4:20268831-20268850 | None:intergenic | 50.0% | |
| CTTGAACCGTTCATCTGGGT+TGG | + | chr1.4:20268626-20268645 | None:intergenic | 50.0% | |
| GAAATCTCGCCGTGATTCTG+TGG | + | chr1.4:20266144-20266163 | None:intergenic | 50.0% | |
| GAGTCATAGTTACCGCCCTT+TGG | - | chr1.4:20268544-20268563 | MS.gene052855:CDS | 50.0% | |
| GATGAAGGGTCCTCTTCTCT+AGG | + | chr1.4:20269134-20269153 | None:intergenic | 50.0% | |
| GCCGTGATTCTGTGGAAATG+CGG | + | chr1.4:20266136-20266155 | None:intergenic | 50.0% | |
| TGTGCCAAAGGGCTTGACTA+AGG | + | chr1.4:20268034-20268053 | None:intergenic | 50.0% | |
| ! | ATCCTTAGGGCCGACTCATA+AGG | + | chr1.4:20268119-20268138 | None:intergenic | 50.0% |
| ! | CAGACTGCAGCTGCACTTTT+CGG | + | chr1.4:20266796-20266815 | None:intergenic | 50.0% |
| ! | GAGTTGTGACTTGGGGATGA+GGG | - | chr1.4:20268587-20268606 | MS.gene052855:CDS | 50.0% |
| ! | GGGGGGTGTGAATTTGAAAC+AGG | + | chr1.4:20264153-20264172 | None:intergenic | 50.0% |
| ! | TCCATATCTGTGCTGGTGCT+TGG | - | chr1.4:20267039-20267058 | MS.gene052855:intron | 50.0% |
| ! | TGAGTTGTGACTTGGGGATG+AGG | - | chr1.4:20268586-20268605 | MS.gene052855:CDS | 50.0% |
| !! | GATGGTGGAAGTGGAAAAGG+AGG | - | chr1.4:20264716-20264735 | MS.gene052855:intron | 50.0% |
| !!! | GAAACAGGGGGTGTTGGTTT+TGG | + | chr1.4:20264138-20264157 | None:intergenic | 50.0% |
| ACATGACGCAGGATCTGCAG+CGG | - | chr1.4:20267791-20267810 | MS.gene052855:intron | 55.0% | |
| ACGACAAGCTGTCGTCGTTG+GGG | - | chr1.4:20264370-20264389 | MS.gene052855:CDS | 55.0% | |
| ACGACGACAGCTTGTCGTTG+GGG | + | chr1.4:20264368-20264387 | None:intergenic | 55.0% | |
| ACTCAACAAACGTTCGGGCC+TGG | + | chr1.4:20268571-20268590 | None:intergenic | 55.0% | |
| CAACGACAAGCTGTCGTCGT+TGG | - | chr1.4:20264368-20264387 | MS.gene052855:CDS | 55.0% | |
| CAACGACGACAGCTTGTCGT+TGG | + | chr1.4:20264370-20264389 | None:intergenic | 55.0% | |
| GCGATGAGGAAGAACGAAGG+CGG | - | chr1.4:20264609-20264628 | MS.gene052855:intron | 55.0% | |
| GTGCAGCTGCAGTCTGTGAT+AGG | - | chr1.4:20266800-20266819 | MS.gene052855:intron | 55.0% | |
| GTGTGGCAGCCATAGCTCAT+AGG | - | chr1.4:20267244-20267263 | MS.gene052855:intron | 55.0% | |
| TAGTTACCGCCCTTTGGTCC+AGG | - | chr1.4:20268550-20268569 | MS.gene052855:CDS | 55.0% | |
| TGCCTTATGAGTCGGCCCTA+AGG | - | chr1.4:20268114-20268133 | MS.gene052855:intron | 55.0% | |
| ! | TTGTGACTTGGGGATGAGGG+TGG | - | chr1.4:20268590-20268609 | MS.gene052855:CDS | 55.0% |
| !! | AATCCATACTCCGGTGCCAC+CGG | + | chr1.4:20264690-20264709 | None:intergenic | 55.0% |
| AACGTTCGGGCCTGGACCAA+AGG | + | chr1.4:20268563-20268582 | None:intergenic | 60.0% | |
| ACGTTCGGGCCTGGACCAAA+GGG | + | chr1.4:20268562-20268581 | None:intergenic | 60.0% | |
| CATGACGCAGGATCTGCAGC+GGG | - | chr1.4:20267792-20267811 | MS.gene052855:intron | 60.0% | |
| CGGTGATATTCCGGTGGCAC+CGG | - | chr1.4:20264677-20264696 | MS.gene052855:intron | 60.0% | |
| ! | ATTCCGGTGGCACCGGAGTA+TGG | - | chr1.4:20264684-20264703 | MS.gene052855:intron | 60.0% |
| !! | CGGTGCCACCGGAATATCAC+CGG | + | chr1.4:20264679-20264698 | None:intergenic | 60.0% |
| TTCGGGCCTGGACCAAAGGG+CGG | + | chr1.4:20268559-20268578 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 20263994 | 20269430 | 20263994 | ID=MS.gene052855 |
| chr1.4 | mRNA | 20263994 | 20269430 | 20263994 | ID=MS.gene052855.t1;Parent=MS.gene052855 |
| chr1.4 | exon | 20268540 | 20269430 | 20268540 | ID=MS.gene052855.t1.exon1;Parent=MS.gene052855.t1 |
| chr1.4 | CDS | 20268540 | 20269430 | 20268540 | ID=cds.MS.gene052855.t1;Parent=MS.gene052855.t1 |
| chr1.4 | exon | 20266817 | 20266872 | 20266817 | ID=MS.gene052855.t1.exon2;Parent=MS.gene052855.t1 |
| chr1.4 | CDS | 20266817 | 20266872 | 20266817 | ID=cds.MS.gene052855.t1;Parent=MS.gene052855.t1 |
| chr1.4 | exon | 20266504 | 20266734 | 20266504 | ID=MS.gene052855.t1.exon3;Parent=MS.gene052855.t1 |
| chr1.4 | CDS | 20266504 | 20266734 | 20266504 | ID=cds.MS.gene052855.t1;Parent=MS.gene052855.t1 |
| chr1.4 | exon | 20265353 | 20265641 | 20265353 | ID=MS.gene052855.t1.exon4;Parent=MS.gene052855.t1 |
| chr1.4 | CDS | 20265353 | 20265641 | 20265353 | ID=cds.MS.gene052855.t1;Parent=MS.gene052855.t1 |
| chr1.4 | exon | 20264252 | 20264448 | 20264252 | ID=MS.gene052855.t1.exon5;Parent=MS.gene052855.t1 |
| chr1.4 | CDS | 20264252 | 20264448 | 20264252 | ID=cds.MS.gene052855.t1;Parent=MS.gene052855.t1 |
| chr1.4 | exon | 20263994 | 20264147 | 20263994 | ID=MS.gene052855.t1.exon6;Parent=MS.gene052855.t1 |
| chr1.4 | CDS | 20263994 | 20264147 | 20263994 | ID=cds.MS.gene052855.t1;Parent=MS.gene052855.t1 |
| Gene Sequence |
| Protein sequence |
