Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070317.t1 | XP_003600351.1 | 90 | 459 | 45 | 1 | 1 | 458 | 93 | 551 | 1.60E-246 | 861.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070317.t1 | Q8VZK9 | 57.4 | 458 | 177 | 4 | 2 | 458 | 108 | 548 | 1.5e-152 | 540.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070317.t1 | G7IV14 | 90.0 | 459 | 45 | 1 | 1 | 458 | 93 | 551 | 1.1e-246 | 861.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene070317 | 0.823173 | 1.60E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene070317 | 0.827782 | 1.29E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene070317 | 0.814842 | 1.25E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene070317 | 0.817068 | 3.99E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene070317 | 0.848527 | 5.79E-60 | -1.69E-46 |
| MS.gene050397 | MS.gene070317 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene070317 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene070317 | 0.820489 | 6.68E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene070317 | 0.833814 | 4.30E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene070317 | 0.827277 | 1.71E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene070317 | 0.816308 | 5.91E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene070317 | 0.818119 | 2.31E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene070317 | 0.815688 | 8.13E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene070317 | 0.818896 | 1.54E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene070317 | 0.841837 | 3.73E-58 | -1.69E-46 |
| MS.gene052326 | MS.gene070317 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene070317 | 0.825392 | 4.81E-54 | -1.69E-46 |
| MS.gene052421 | MS.gene070317 | 0.842153 | 3.08E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene070317 | 0.833293 | 5.80E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene070317 | 0.804994 | 1.65E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene070317 | 0.802449 | 5.58E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene070317 | 0.808727 | 2.69E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene070317 | 0.820121 | 8.11E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene070317 | 0.817565 | 3.09E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene070317 | 0.81497 | 1.17E-51 | -1.69E-46 |
| MS.gene054013 | MS.gene070317 | 0.817862 | 2.65E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene070317 | 0.820784 | 5.71E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene070317 | 0.806735 | 7.12E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene070317 | 0.84743 | 1.16E-59 | -1.69E-46 |
| MS.gene055277 | MS.gene070317 | 0.844671 | 6.55E-59 | -1.69E-46 |
| MS.gene055412 | MS.gene070317 | 0.811827 | 5.76E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene070317 | 0.820793 | 5.68E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene070317 | 0.810253 | 1.26E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene070317 | 0.808004 | 3.83E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene070317 | 0.842279 | 2.85E-58 | -1.69E-46 |
| MS.gene056407 | MS.gene070317 | 0.829788 | 4.23E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene070317 | 0.813132 | 2.99E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene070317 | 0.81175 | 5.99E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene070317 | 0.805972 | 1.03E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene070317 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene056659 | MS.gene070317 | 0.804168 | 2.46E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene070317 | 0.809671 | 1.69E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene070317 | 0.831964 | 1.24E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene070317 | 0.81387 | 2.06E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene070317 | 0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene057749 | MS.gene070317 | 0.8008 | 1.22E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene070317 | 0.803505 | 3.38E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene070317 | 0.808611 | 2.84E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene070317 | 0.812151 | 4.90E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene070317 | 0.810059 | 1.39E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene070317 | 0.813619 | 2.33E-51 | -1.69E-46 |
| MS.gene058365 | MS.gene070317 | 0.811153 | 8.07E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene070317 | 0.859389 | 4.28E-63 | -1.69E-46 |
| MS.gene058995 | MS.gene070317 | 0.809714 | 1.65E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene070317 | 0.842278 | 2.85E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene070317 | 0.801669 | 8.07E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene070317 | 0.806821 | 6.83E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene070317 | 0.826475 | 2.66E-54 | -1.69E-46 |
| MS.gene05959 | MS.gene070317 | 0.806575 | 7.70E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene070317 | 0.826432 | 2.72E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene070317 | 0.855631 | 5.54E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene070317 | 0.855382 | 6.55E-62 | -1.69E-46 |
| MS.gene059695 | MS.gene070317 | 0.85536 | 6.65E-62 | -1.69E-46 |
| MS.gene059711 | MS.gene070317 | 0.802209 | 6.25E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene070317 | 0.810808 | 9.59E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene070317 | 0.821072 | 4.90E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene070317 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene061049 | MS.gene070317 | 0.843463 | 1.38E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene070317 | -0.800896 | 1.16E-48 | -1.69E-46 |
| MS.gene061200 | MS.gene070317 | 0.80902 | 2.33E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070317.t1 | MTR_3g060240 | 89.978 | 459 | 45 | 1 | 1 | 458 | 93 | 551 | 0.0 | 878 |
| MS.gene070317.t1 | MTR_3g060220 | 87.991 | 458 | 55 | 0 | 1 | 458 | 94 | 551 | 0.0 | 859 |
| MS.gene070317.t1 | MTR_3g060220 | 87.991 | 458 | 55 | 0 | 1 | 458 | 93 | 550 | 0.0 | 859 |
| MS.gene070317.t1 | MTR_3g060280 | 70.499 | 461 | 126 | 4 | 1 | 458 | 103 | 556 | 0.0 | 676 |
| MS.gene070317.t1 | MTR_3g060280 | 70.499 | 461 | 126 | 4 | 1 | 458 | 103 | 556 | 0.0 | 676 |
| MS.gene070317.t1 | MTR_3g060280 | 70.499 | 461 | 126 | 4 | 1 | 458 | 103 | 556 | 0.0 | 675 |
| MS.gene070317.t1 | MTR_3g060280 | 71.676 | 346 | 88 | 4 | 1 | 343 | 103 | 441 | 1.76e-179 | 509 |
| MS.gene070317.t1 | MTR_8g063270 | 37.575 | 503 | 257 | 9 | 1 | 450 | 75 | 573 | 1.99e-110 | 343 |
| MS.gene070317.t1 | MTR_2g087960 | 37.267 | 483 | 268 | 8 | 2 | 458 | 95 | 568 | 3.63e-110 | 337 |
| MS.gene070317.t1 | MTR_2g087900 | 39.308 | 491 | 250 | 10 | 2 | 457 | 94 | 571 | 4.10e-110 | 337 |
| MS.gene070317.t1 | MTR_8g063270 | 37.376 | 503 | 258 | 9 | 1 | 450 | 280 | 778 | 1.32e-108 | 343 |
| MS.gene070317.t1 | MTR_2g087960 | 37.267 | 483 | 268 | 8 | 2 | 458 | 95 | 568 | 1.75e-108 | 338 |
| MS.gene070317.t1 | MTR_2g087900 | 39.228 | 492 | 251 | 10 | 2 | 458 | 94 | 572 | 2.44e-108 | 337 |
| MS.gene070317.t1 | MTR_2g087980 | 37.603 | 484 | 262 | 9 | 2 | 458 | 88 | 558 | 2.39e-106 | 332 |
| MS.gene070317.t1 | MTR_8g086600 | 35.417 | 528 | 265 | 9 | 2 | 457 | 272 | 795 | 1.06e-105 | 336 |
| MS.gene070317.t1 | MTR_2g087950 | 38.618 | 492 | 250 | 8 | 2 | 458 | 90 | 564 | 2.20e-105 | 330 |
| MS.gene070317.t1 | MTR_4g088225 | 37.740 | 469 | 271 | 9 | 2 | 458 | 99 | 558 | 4.25e-105 | 328 |
| MS.gene070317.t1 | MTR_4g088225 | 37.740 | 469 | 271 | 9 | 2 | 458 | 99 | 558 | 4.53e-105 | 328 |
| MS.gene070317.t1 | MTR_2g016630 | 35.526 | 532 | 262 | 10 | 2 | 457 | 257 | 783 | 1.03e-104 | 333 |
| MS.gene070317.t1 | MTR_4g130510 | 34.483 | 522 | 274 | 9 | 1 | 457 | 326 | 844 | 1.61e-102 | 325 |
| MS.gene070317.t1 | MTR_4g130510 | 34.483 | 522 | 274 | 9 | 1 | 457 | 326 | 844 | 4.46e-101 | 325 |
| MS.gene070317.t1 | MTR_1g069605 | 35.783 | 517 | 269 | 10 | 1 | 457 | 186 | 699 | 1.10e-100 | 321 |
| MS.gene070317.t1 | MTR_4g050000 | 39.035 | 456 | 242 | 8 | 2 | 434 | 90 | 532 | 1.63e-100 | 317 |
| MS.gene070317.t1 | MTR_1g073740 | 37.632 | 473 | 264 | 7 | 2 | 458 | 100 | 557 | 4.54e-99 | 313 |
| MS.gene070317.t1 | MTR_3g005560 | 36.192 | 478 | 258 | 7 | 2 | 458 | 86 | 537 | 1.17e-98 | 307 |
| MS.gene070317.t1 | MTR_3g005560 | 36.192 | 478 | 258 | 7 | 2 | 458 | 86 | 537 | 5.29e-97 | 306 |
| MS.gene070317.t1 | MTR_3g450800 | 35.084 | 476 | 265 | 8 | 2 | 458 | 38 | 488 | 1.16e-95 | 301 |
| MS.gene070317.t1 | MTR_0011s0020 | 36.232 | 483 | 251 | 10 | 2 | 458 | 86 | 537 | 1.20e-95 | 303 |
| MS.gene070317.t1 | MTR_2g037830 | 35.941 | 473 | 266 | 5 | 2 | 458 | 86 | 537 | 3.81e-95 | 301 |
| MS.gene070317.t1 | MTR_4g130510 | 32.374 | 556 | 274 | 10 | 1 | 457 | 326 | 878 | 1.88e-94 | 308 |
| MS.gene070317.t1 | MTR_2g037830 | 35.915 | 426 | 229 | 6 | 2 | 411 | 86 | 483 | 1.02e-83 | 267 |
| MS.gene070317.t1 | MTR_2g087900 | 39.211 | 380 | 187 | 9 | 2 | 347 | 94 | 463 | 7.44e-82 | 261 |
| MS.gene070317.t1 | MTR_1g098550 | 43.087 | 311 | 167 | 5 | 2 | 305 | 367 | 674 | 1.55e-79 | 267 |
| MS.gene070317.t1 | MTR_1g098550 | 40.541 | 148 | 87 | 1 | 312 | 458 | 757 | 904 | 2.07e-28 | 119 |
| MS.gene070317.t1 | MTR_1g098550 | 43.087 | 311 | 167 | 5 | 2 | 305 | 363 | 670 | 1.71e-79 | 267 |
| MS.gene070317.t1 | MTR_1g098550 | 40.541 | 148 | 87 | 1 | 312 | 458 | 753 | 900 | 2.14e-28 | 119 |
| MS.gene070317.t1 | MTR_3g030040 | 44.257 | 296 | 155 | 6 | 2 | 290 | 347 | 639 | 2.45e-79 | 266 |
| MS.gene070317.t1 | MTR_3g030040 | 37.671 | 146 | 90 | 1 | 314 | 458 | 739 | 884 | 7.55e-25 | 108 |
| MS.gene070317.t1 | MTR_8g092590 | 42.122 | 311 | 170 | 6 | 2 | 305 | 365 | 672 | 4.26e-78 | 263 |
| MS.gene070317.t1 | MTR_8g092590 | 40.141 | 142 | 78 | 2 | 321 | 458 | 765 | 903 | 3.78e-25 | 109 |
| MS.gene070317.t1 | MTR_4g130510 | 42.088 | 297 | 162 | 5 | 1 | 290 | 326 | 619 | 1.16e-77 | 256 |
| MS.gene070317.t1 | MTR_8g037260 | 42.617 | 298 | 161 | 5 | 2 | 292 | 347 | 641 | 2.73e-77 | 261 |
| MS.gene070317.t1 | MTR_8g037260 | 37.671 | 146 | 90 | 1 | 314 | 458 | 739 | 884 | 2.96e-25 | 109 |
| MS.gene070317.t1 | MTR_7g106680 | 42.953 | 298 | 160 | 6 | 2 | 292 | 305 | 599 | 3.89e-76 | 257 |
| MS.gene070317.t1 | MTR_7g106680 | 38.129 | 139 | 85 | 1 | 321 | 458 | 700 | 838 | 1.01e-24 | 108 |
| MS.gene070317.t1 | MTR_3g107520 | 42.905 | 296 | 159 | 5 | 2 | 290 | 357 | 649 | 8.17e-75 | 254 |
| MS.gene070317.t1 | MTR_3g107520 | 39.394 | 132 | 79 | 1 | 328 | 458 | 761 | 892 | 6.91e-26 | 111 |
| MS.gene070317.t1 | MTR_3g007770 | 42.905 | 296 | 159 | 5 | 2 | 290 | 314 | 606 | 1.07e-72 | 248 |
| MS.gene070317.t1 | MTR_3g007770 | 40.152 | 132 | 78 | 1 | 328 | 458 | 721 | 852 | 3.69e-22 | 100 |
| MS.gene070317.t1 | MTR_2g035780 | 40.541 | 296 | 166 | 5 | 2 | 290 | 298 | 590 | 1.92e-71 | 244 |
| MS.gene070317.t1 | MTR_2g035780 | 39.073 | 151 | 82 | 3 | 308 | 457 | 709 | 850 | 1.76e-26 | 113 |
| MS.gene070317.t1 | MTR_3g005560 | 37.017 | 362 | 181 | 7 | 2 | 342 | 86 | 421 | 2.34e-71 | 232 |
| MS.gene070317.t1 | MTR_7g109200 | 29.573 | 585 | 270 | 15 | 2 | 452 | 394 | 970 | 6.83e-71 | 243 |
| MS.gene070317.t1 | MTR_2g087900 | 43.182 | 264 | 131 | 5 | 2 | 258 | 94 | 345 | 1.31e-69 | 225 |
| MS.gene070317.t1 | MTR_5g029190 | 36.628 | 344 | 162 | 7 | 2 | 290 | 349 | 691 | 6.69e-69 | 238 |
| MS.gene070317.t1 | MTR_5g029190 | 34.646 | 127 | 80 | 2 | 327 | 452 | 798 | 922 | 6.01e-16 | 81.3 |
| MS.gene070317.t1 | MTR_4g077910 | 38.372 | 344 | 156 | 8 | 2 | 290 | 370 | 712 | 1.80e-68 | 236 |
| MS.gene070317.t1 | MTR_4g077910 | 30.488 | 164 | 109 | 3 | 290 | 452 | 784 | 943 | 9.94e-17 | 83.6 |
| MS.gene070317.t1 | MTR_1g039480 | 37.006 | 354 | 166 | 8 | 2 | 302 | 356 | 705 | 7.36e-67 | 232 |
| MS.gene070317.t1 | MTR_1g039480 | 32.812 | 128 | 81 | 2 | 327 | 452 | 808 | 932 | 1.40e-15 | 80.1 |
| MS.gene070317.t1 | MTR_1g039445 | 33.763 | 388 | 193 | 9 | 2 | 336 | 342 | 718 | 2.55e-65 | 227 |
| MS.gene070317.t1 | MTR_1g039445 | 32.824 | 131 | 83 | 2 | 324 | 452 | 777 | 904 | 7.52e-16 | 80.9 |
| MS.gene070317.t1 | MTR_7g116230 | 39.159 | 309 | 167 | 7 | 2 | 290 | 226 | 533 | 7.32e-65 | 224 |
| MS.gene070317.t1 | MTR_2g438220 | 35.447 | 347 | 167 | 6 | 2 | 292 | 256 | 601 | 2.35e-64 | 224 |
| MS.gene070317.t1 | MTR_2g438220 | 36.220 | 127 | 78 | 2 | 327 | 452 | 701 | 825 | 1.31e-16 | 83.2 |
| MS.gene070317.t1 | MTR_3g091270 | 33.448 | 290 | 146 | 4 | 2 | 290 | 107 | 350 | 9.27e-42 | 155 |
| MS.gene070317.t1 | MTR_2g087900 | 40.361 | 166 | 89 | 3 | 2 | 162 | 94 | 254 | 3.83e-34 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070317.t1 | AT1G55850 | 57.424 | 458 | 177 | 4 | 2 | 458 | 108 | 548 | 0.0 | 555 |
| MS.gene070317.t1 | AT4G23990 | 41.037 | 463 | 259 | 6 | 2 | 458 | 117 | 571 | 4.99e-124 | 378 |
| MS.gene070317.t1 | AT4G24000 | 40.781 | 461 | 256 | 5 | 2 | 458 | 95 | 542 | 7.63e-123 | 374 |
| MS.gene070317.t1 | AT4G24010 | 40.564 | 461 | 264 | 4 | 2 | 458 | 98 | 552 | 2.27e-119 | 366 |
| MS.gene070317.t1 | AT5G17420 | 35.373 | 523 | 269 | 9 | 1 | 457 | 313 | 832 | 1.13e-105 | 337 |
| MS.gene070317.t1 | AT2G25540 | 34.879 | 539 | 266 | 11 | 2 | 458 | 331 | 866 | 1.71e-102 | 329 |
| MS.gene070317.t1 | AT2G32540 | 35.887 | 496 | 259 | 10 | 2 | 458 | 92 | 567 | 2.64e-94 | 301 |
| MS.gene070317.t1 | AT5G09870 | 34.815 | 540 | 266 | 14 | 2 | 458 | 340 | 876 | 1.51e-93 | 305 |
| MS.gene070317.t1 | AT2G32530 | 34.827 | 491 | 271 | 10 | 2 | 458 | 92 | 567 | 2.69e-92 | 296 |
| MS.gene070317.t1 | AT4G15320 | 36.179 | 492 | 260 | 10 | 2 | 458 | 92 | 564 | 1.06e-91 | 294 |
| MS.gene070317.t1 | AT4G15320 | 36.179 | 492 | 260 | 10 | 2 | 458 | 92 | 564 | 1.42e-91 | 294 |
| MS.gene070317.t1 | AT4G15290 | 36.511 | 493 | 258 | 11 | 2 | 458 | 92 | 565 | 1.88e-90 | 291 |
| MS.gene070317.t1 | AT2G32620 | 35.743 | 498 | 256 | 14 | 2 | 458 | 92 | 566 | 1.32e-89 | 285 |
| MS.gene070317.t1 | AT4G15320 | 35.503 | 507 | 258 | 11 | 2 | 458 | 92 | 579 | 1.52e-89 | 289 |
| MS.gene070317.t1 | AT2G32620 | 35.743 | 498 | 256 | 14 | 2 | 458 | 92 | 566 | 3.40e-88 | 285 |
| MS.gene070317.t1 | AT2G32610 | 35.259 | 502 | 254 | 14 | 2 | 458 | 92 | 567 | 1.70e-87 | 283 |
| MS.gene070317.t1 | AT2G32620 | 35.294 | 493 | 255 | 14 | 7 | 458 | 1 | 470 | 4.23e-86 | 277 |
| MS.gene070317.t1 | AT2G32620 | 36.667 | 450 | 229 | 11 | 2 | 414 | 92 | 522 | 7.65e-86 | 273 |
| MS.gene070317.t1 | AT4G15320 | 33.086 | 538 | 260 | 11 | 2 | 458 | 92 | 610 | 2.59e-83 | 273 |
| MS.gene070317.t1 | AT4G23990 | 37.017 | 362 | 216 | 5 | 103 | 458 | 2 | 357 | 1.40e-79 | 256 |
| MS.gene070317.t1 | AT4G24000 | 36.667 | 360 | 213 | 4 | 103 | 458 | 2 | 350 | 2.25e-79 | 256 |
| MS.gene070317.t1 | AT4G39350 | 42.568 | 296 | 160 | 6 | 2 | 290 | 353 | 645 | 5.82e-78 | 263 |
| MS.gene070317.t1 | AT4G39350 | 39.041 | 146 | 88 | 1 | 314 | 458 | 745 | 890 | 4.85e-25 | 109 |
| MS.gene070317.t1 | AT5G05170 | 42.953 | 298 | 160 | 5 | 2 | 292 | 335 | 629 | 6.10e-78 | 263 |
| MS.gene070317.t1 | AT5G05170 | 37.333 | 150 | 84 | 3 | 310 | 458 | 731 | 871 | 1.22e-23 | 105 |
| MS.gene070317.t1 | AT5G64740 | 42.122 | 311 | 170 | 6 | 2 | 305 | 352 | 659 | 2.39e-77 | 261 |
| MS.gene070317.t1 | AT5G64740 | 38.514 | 148 | 90 | 1 | 312 | 458 | 744 | 891 | 1.03e-25 | 111 |
| MS.gene070317.t1 | AT4G15320 | 31.325 | 581 | 256 | 13 | 2 | 458 | 92 | 653 | 6.92e-77 | 256 |
| MS.gene070317.t1 | AT2G21770 | 42.905 | 296 | 159 | 5 | 2 | 290 | 358 | 650 | 4.47e-76 | 258 |
| MS.gene070317.t1 | AT4G18780 | 42.230 | 296 | 161 | 5 | 2 | 290 | 260 | 552 | 8.17e-76 | 256 |
| MS.gene070317.t1 | AT4G18780 | 38.816 | 152 | 82 | 3 | 308 | 457 | 647 | 789 | 7.17e-25 | 108 |
| MS.gene070317.t1 | AT5G44030 | 41.611 | 298 | 164 | 5 | 2 | 292 | 12 | 306 | 3.83e-75 | 250 |
| MS.gene070317.t1 | AT5G44030 | 39.073 | 151 | 82 | 3 | 308 | 457 | 433 | 574 | 1.71e-25 | 110 |
| MS.gene070317.t1 | AT4G32410 | 41.892 | 296 | 162 | 5 | 2 | 290 | 351 | 643 | 4.08e-75 | 255 |
| MS.gene070317.t1 | AT4G32410 | 40.152 | 132 | 78 | 1 | 328 | 458 | 755 | 886 | 2.32e-25 | 110 |
| MS.gene070317.t1 | AT5G44030 | 41.611 | 298 | 164 | 5 | 2 | 292 | 291 | 585 | 1.55e-73 | 250 |
| MS.gene070317.t1 | AT5G44030 | 39.073 | 151 | 82 | 3 | 308 | 457 | 712 | 853 | 1.11e-25 | 111 |
| MS.gene070317.t1 | AT5G44030 | 41.611 | 298 | 164 | 5 | 2 | 292 | 320 | 614 | 1.90e-73 | 250 |
| MS.gene070317.t1 | AT5G44030 | 39.073 | 151 | 82 | 3 | 308 | 457 | 741 | 882 | 1.21e-25 | 111 |
| MS.gene070317.t1 | AT1G32180 | 37.322 | 351 | 157 | 7 | 2 | 290 | 203 | 552 | 2.78e-70 | 240 |
| MS.gene070317.t1 | AT1G32180 | 32.331 | 133 | 81 | 2 | 324 | 452 | 654 | 781 | 3.40e-14 | 75.5 |
| MS.gene070317.t1 | AT1G32180 | 37.322 | 351 | 157 | 7 | 2 | 290 | 203 | 552 | 2.78e-70 | 240 |
| MS.gene070317.t1 | AT1G32180 | 32.331 | 133 | 81 | 2 | 324 | 452 | 654 | 781 | 3.40e-14 | 75.5 |
| MS.gene070317.t1 | AT3G03050 | 38.012 | 342 | 158 | 7 | 2 | 290 | 375 | 715 | 1.37e-68 | 237 |
| MS.gene070317.t1 | AT3G03050 | 32.308 | 130 | 79 | 2 | 327 | 452 | 822 | 946 | 5.22e-16 | 81.3 |
| MS.gene070317.t1 | AT1G02730 | 37.752 | 347 | 156 | 7 | 2 | 290 | 399 | 743 | 9.63e-68 | 234 |
| MS.gene070317.t1 | AT1G02730 | 33.333 | 126 | 83 | 1 | 327 | 452 | 858 | 982 | 1.37e-16 | 83.2 |
| MS.gene070317.t1 | AT5G16910 | 36.620 | 355 | 165 | 8 | 2 | 297 | 378 | 731 | 4.72e-67 | 233 |
| MS.gene070317.t1 | AT5G16910 | 28.221 | 163 | 114 | 2 | 290 | 452 | 787 | 946 | 2.09e-15 | 79.7 |
| MS.gene070317.t1 | AT2G33100 | 36.628 | 344 | 162 | 6 | 2 | 290 | 264 | 606 | 1.19e-65 | 228 |
| MS.gene070317.t1 | AT2G33100 | 34.646 | 127 | 80 | 2 | 327 | 452 | 715 | 839 | 6.74e-16 | 80.9 |
| MS.gene070317.t1 | AT2G33100 | 36.628 | 344 | 162 | 6 | 2 | 290 | 264 | 606 | 1.19e-65 | 228 |
| MS.gene070317.t1 | AT2G33100 | 34.646 | 127 | 80 | 2 | 327 | 452 | 715 | 839 | 6.74e-16 | 80.9 |
| MS.gene070317.t1 | AT4G38190 | 35.673 | 342 | 166 | 7 | 2 | 290 | 353 | 693 | 3.67e-64 | 224 |
| MS.gene070317.t1 | AT4G38190 | 33.077 | 130 | 84 | 2 | 324 | 452 | 780 | 907 | 6.51e-15 | 78.2 |
Find 92 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAGTTATGATGAAATT+TGG | 0.141625 | 3.3:+48555018 | None:intergenic |
| AAAAGCTCTTTAGCATTATT+AGG | 0.175521 | 3.3:+48555989 | None:intergenic |
| TATGCCCACCTTGGTATATT+TGG | 0.175535 | 3.3:-48555056 | MS.gene070317:CDS |
| ATTATTGGTGGTTCAATATC+TGG | 0.182940 | 3.3:+48556220 | None:intergenic |
| AGTCCTATTTGGTACTCTTT+TGG | 0.224030 | 3.3:-48547274 | MS.gene070317:CDS |
| TTTCAAAGTTCAGTCCTATT+TGG | 0.238172 | 3.3:-48547285 | MS.gene070317:CDS |
| CAAACAATTCTCAATCTCTA+AGG | 0.258363 | 3.3:-48554573 | MS.gene070317:CDS |
| TCCAACAAGAAAAGCTTTCT+TGG | 0.295650 | 3.3:-48547383 | MS.gene070317:CDS |
| TTTGGTGGGCCCCTTTATAT+TGG | 0.310755 | 3.3:-48550675 | MS.gene070317:CDS |
| TGACATATACGGTGGTTCTT+TGG | 0.317006 | 3.3:-48554461 | MS.gene070317:CDS |
| AAAGCTCTTTAGCATTATTA+GGG | 0.321781 | 3.3:+48555990 | None:intergenic |
| AGCAGCCGGTTCCAATATAA+AGG | 0.324383 | 3.3:+48550664 | None:intergenic |
| GGATGCACTTTGCTTCTTCA+TGG | 0.325256 | 3.3:-48554551 | MS.gene070317:CDS |
| ACTGTGTTAATCACCATTAT+TGG | 0.325856 | 3.3:+48556205 | None:intergenic |
| TGCCTTTGTGCAGGCTCCTC+AGG | 0.325914 | 3.3:-48554506 | MS.gene070317:CDS |
| TAATAATGCTAAAGAGCTTT+TGG | 0.331936 | 3.3:-48555987 | MS.gene070317:CDS |
| CTTCTTCATGGATGAAGAAA+AGG | 0.332640 | 3.3:-48554539 | MS.gene070317:CDS |
| TTGAAGTTATGATGAAATTT+GGG | 0.344454 | 3.3:+48555019 | None:intergenic |
| AAAGAGTACCAATGAATTCA+TGG | 0.349547 | 3.3:+48554988 | None:intergenic |
| AGATATTGAACCACCAATAA+TGG | 0.352515 | 3.3:-48556218 | MS.gene070317:CDS |
| TGGTTACTTTGTTACCTTGA+TGG | 0.357220 | 3.3:+48555964 | None:intergenic |
| AATCCAAAAGAGTACCAAAT+AGG | 0.368216 | 3.3:+48547271 | None:intergenic |
| GTAGTGGAGGATATAATAAC+AGG | 0.376206 | 3.3:-48547448 | MS.gene070317:CDS |
| TTGGAACCGGCTGCTTTCAT+AGG | 0.383556 | 3.3:-48550656 | MS.gene070317:CDS |
| CTACTCGACTTTCCATATCT+TGG | 0.397111 | 3.3:+48555437 | None:intergenic |
| AGTGACAATAAGACATTTGA+AGG | 0.402225 | 3.3:+48547236 | None:intergenic |
| GTGATCAATGCAAGATTGAT+TGG | 0.407326 | 3.3:-48550605 | MS.gene070317:CDS |
| ATTATTAGGGTAAGTGTCTA+AGG | 0.410530 | 3.3:+48556003 | None:intergenic |
| CTTCGGTACTTCACCCAACT+TGG | 0.414455 | 3.3:+48555405 | None:intergenic |
| TGATTTGAGTATGCTTCCTT+CGG | 0.414471 | 3.3:+48555388 | None:intergenic |
| CCAACAAGAAAAGCTTTCTT+GGG | 0.416171 | 3.3:-48547382 | MS.gene070317:CDS |
| ATAGATACTGCTTCATAGAA+AGG | 0.419423 | 3.3:-48555107 | MS.gene070317:intron |
| ATAGAGACTGTACCAAGATA+TGG | 0.426232 | 3.3:-48555449 | MS.gene070317:intron |
| GGGCCCCTTTATATTGGAAC+CGG | 0.426272 | 3.3:-48550669 | MS.gene070317:CDS |
| TTCTTTGGCTATAGCTTATG+AGG | 0.433152 | 3.3:-48554446 | MS.gene070317:intron |
| TTTCATCATAACTTCAAAGC+TGG | 0.436862 | 3.3:-48555013 | MS.gene070317:CDS |
| TTGCAGATGGGACTAGTATA+TGG | 0.442987 | 3.3:-48547475 | MS.gene070317:intron |
| CACACAAATATGTCCACTTT+GGG | 0.444982 | 3.3:+48556253 | None:intergenic |
| CTTCTAAATTTGCTAAGCAT+TGG | 0.454514 | 3.3:-48556084 | MS.gene070317:CDS |
| CTTATTGTCACTATAATATG+TGG | 0.459961 | 3.3:-48547225 | MS.gene070317:CDS |
| TATGGCTTAGATGGATTTGG+TGG | 0.462979 | 3.3:-48550690 | MS.gene070317:CDS |
| GCAGCCGGTTCCAATATAAA+GGG | 0.466484 | 3.3:+48550665 | None:intergenic |
| GGAAGCATACTCAAATCATA+AGG | 0.479194 | 3.3:-48555383 | MS.gene070317:CDS |
| TAAAATTTGAAATAGTCCTT+CGG | 0.480539 | 3.3:+48547309 | None:intergenic |
| GAAACAAGGAAATGCCTTTG+AGG | 0.483991 | 3.3:+48547149 | None:intergenic |
| CAATAAGACATTTGAAGGCC+TGG | 0.486113 | 3.3:+48547241 | None:intergenic |
| CCTACGAGCAAAACACATCA+TGG | 0.486224 | 3.3:-48550491 | MS.gene070317:CDS |
| AGCTGGAGCCATGAATTCAT+TGG | 0.491316 | 3.3:-48554996 | MS.gene070317:intron |
| ACACACAAATATGTCCACTT+TGG | 0.492778 | 3.3:+48556252 | None:intergenic |
| AAGGTCTTGAAGTATGCATC+TGG | 0.496793 | 3.3:+48556022 | None:intergenic |
| GTAGAAAATGCATCCAAGTT+GGG | 0.500272 | 3.3:-48555418 | MS.gene070317:CDS |
| GCCATTCTGCAAGAGATTCA+AGG | 0.500880 | 3.3:-48556059 | MS.gene070317:CDS |
| AGGCATTTCCTTGTTTCCAC+AGG | 0.504440 | 3.3:-48547143 | None:intergenic |
| ACCTTGAATCTCTTGCAGAA+TGG | 0.504885 | 3.3:+48556058 | None:intergenic |
| ACATGAAATTGCCTTTGTGC+AGG | 0.505115 | 3.3:-48554515 | MS.gene070317:CDS |
| GTGTTAATCACCATTATTGG+TGG | 0.509771 | 3.3:+48556208 | None:intergenic |
| TTCTTCATGGATGAAGAAAA+GGG | 0.528326 | 3.3:-48554538 | MS.gene070317:CDS |
| AGTAGAAAATGCATCCAAGT+TGG | 0.531734 | 3.3:-48555419 | MS.gene070317:CDS |
| AGTGGACATATTTGTGTGTA+CGG | 0.534171 | 3.3:-48556248 | MS.gene070317:CDS |
| AAGTATGCATCTGGCGACCT+AGG | 0.537937 | 3.3:+48556031 | None:intergenic |
| TGTCATCAATGATTAGCAAT+GGG | 0.542769 | 3.3:-48554630 | MS.gene070317:CDS |
| AAACACATCATGGGGAAAAG+AGG | 0.548558 | 3.3:-48550481 | MS.gene070317:intron |
| AAACAATTCTCAATCTCTAA+GGG | 0.548566 | 3.3:-48554572 | MS.gene070317:CDS |
| ATGGCTTAGATGGATTTGGT+GGG | 0.554390 | 3.3:-48550689 | MS.gene070317:CDS |
| TACACACTAAGCTTCTCTGT+TGG | 0.555790 | 3.3:+48556157 | None:intergenic |
| GTGTATCTTTCAGATGATGC+TGG | 0.557262 | 3.3:-48556139 | MS.gene070317:CDS |
| TAACACAGTATTATCTGTGA+TGG | 0.561776 | 3.3:-48556191 | MS.gene070317:CDS |
| TGAGAACATGCTACCCAAAG+TGG | 0.566397 | 3.3:-48556266 | None:intergenic |
| GTGTCATCAATGATTAGCAA+TGG | 0.569343 | 3.3:-48554631 | MS.gene070317:CDS |
| ATCTCTCCTATGAAAGCAGC+CGG | 0.575179 | 3.3:+48550650 | None:intergenic |
| CTACGAGCAAAACACATCAT+GGG | 0.575625 | 3.3:-48550490 | MS.gene070317:CDS |
| GGAATAATACAGAGTTGGAA+AGG | 0.578109 | 3.3:+48547192 | None:intergenic |
| ACGGTGGAATAATACAGAGT+TGG | 0.591014 | 3.3:+48547187 | None:intergenic |
| AGTATATGGTTGTGTAGTGG+AGG | 0.598490 | 3.3:-48547461 | MS.gene070317:CDS |
| CGAGCCAAATATACCAAGGT+GGG | 0.599351 | 3.3:+48555052 | None:intergenic |
| ACTAGTATATGGTTGTGTAG+TGG | 0.603304 | 3.3:-48547464 | MS.gene070317:CDS |
| CACTTGTTCAACATAAGAGA+TGG | 0.605347 | 3.3:-48547333 | MS.gene070317:CDS |
| GACAATGCTAGAGATGAAGA+TGG | 0.605747 | 3.3:-48555085 | MS.gene070317:CDS |
| AGTGATTCTGACAATGTGGT+TGG | 0.613588 | 3.3:+48547352 | None:intergenic |
| TTATTGTCACTATAATATGT+GGG | 0.619844 | 3.3:-48547224 | MS.gene070317:CDS |
| CAAGTTGGGTGAAGTACCGA+AGG | 0.628457 | 3.3:-48555404 | MS.gene070317:CDS |
| CATAGGAGAGATACACTATG+TGG | 0.633146 | 3.3:-48550639 | MS.gene070317:CDS |
| ATACTTGAAGAATTGTGTCA+TGG | 0.633922 | 3.3:+48555323 | None:intergenic |
| TACGAGCAAAACACATCATG+GGG | 0.641361 | 3.3:-48550489 | MS.gene070317:CDS |
| CTCACGAGCCAAATATACCA+AGG | 0.657691 | 3.3:+48555048 | None:intergenic |
| CAGCCGGTTCCAATATAAAG+GGG | 0.661607 | 3.3:+48550666 | None:intergenic |
| TAGTGGAGGATATAATAACA+GGG | 0.662471 | 3.3:-48547447 | MS.gene070317:CDS |
| AGAGATTCAAGGTTGAACCT+AGG | 0.664021 | 3.3:-48556048 | MS.gene070317:CDS |
| CAACATAAGAGATGGTCCGA+AGG | 0.677050 | 3.3:-48547325 | MS.gene070317:CDS |
| ACGAGCCAAATATACCAAGG+TGG | 0.686997 | 3.3:+48555051 | None:intergenic |
| GACCTGAGGAGCCTGCACAA+AGG | 0.692272 | 3.3:+48554504 | None:intergenic |
| AACAAGTGATTCTGACAATG+TGG | 0.692479 | 3.3:+48547348 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 48547144 | 48556281 | 48547144 | ID=MS.gene070317 |
| chr3.3 | mRNA | 48547144 | 48556281 | 48547144 | ID=MS.gene070317.t1;Parent=MS.gene070317 |
| chr3.3 | exon | 48555979 | 48556281 | 48555979 | ID=MS.gene070317.t1.exon1;Parent=MS.gene070317.t1 |
| chr3.3 | CDS | 48555979 | 48556281 | 48555979 | ID=cds.MS.gene070317.t1;Parent=MS.gene070317.t1 |
| chr3.3 | exon | 48555327 | 48555467 | 48555327 | ID=MS.gene070317.t1.exon2;Parent=MS.gene070317.t1 |
| chr3.3 | CDS | 48555327 | 48555467 | 48555327 | ID=cds.MS.gene070317.t1;Parent=MS.gene070317.t1 |
| chr3.3 | exon | 48554997 | 48555125 | 48554997 | ID=MS.gene070317.t1.exon3;Parent=MS.gene070317.t1 |
| chr3.3 | CDS | 48554997 | 48555125 | 48554997 | ID=cds.MS.gene070317.t1;Parent=MS.gene070317.t1 |
| chr3.3 | exon | 48554447 | 48554659 | 48554447 | ID=MS.gene070317.t1.exon4;Parent=MS.gene070317.t1 |
| chr3.3 | CDS | 48554447 | 48554659 | 48554447 | ID=cds.MS.gene070317.t1;Parent=MS.gene070317.t1 |
| chr3.3 | exon | 48550482 | 48550721 | 48550482 | ID=MS.gene070317.t1.exon5;Parent=MS.gene070317.t1 |
| chr3.3 | CDS | 48550482 | 48550721 | 48550482 | ID=cds.MS.gene070317.t1;Parent=MS.gene070317.t1 |
| chr3.3 | exon | 48547144 | 48547491 | 48547144 | ID=MS.gene070317.t1.exon6;Parent=MS.gene070317.t1 |
| chr3.3 | CDS | 48547144 | 48547491 | 48547144 | ID=cds.MS.gene070317.t1;Parent=MS.gene070317.t1 |
| Gene Sequence |
| Protein sequence |
