AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20482


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20482.t1 MTR_6g011340 79.959 484 43 2 1 430 1 484 0.0 747
MS.gene20482.t1 MTR_6g014187 69.151 483 95 2 1 429 1 483 0.0 663
MS.gene20482.t1 MTR_6g014186 68.481 441 123 1 4 428 1 441 0.0 626
MS.gene20482.t1 MTR_6g013960 66.874 483 106 6 1 429 1 483 0.0 620
MS.gene20482.t1 MTR_6g014040 64.669 484 116 3 1 429 1 484 0.0 599
MS.gene20482.t1 MTR_6g013450 61.856 485 130 3 1 430 1 485 0.0 596
MS.gene20482.t1 MTR_6g014020 63.147 483 124 4 1 429 1 483 0.0 588
MS.gene20482.t1 MTR_6g014310 63.505 485 122 4 1 430 1 485 0.0 580
MS.gene20482.t1 MTR_6g014270 61.411 482 130 6 4 429 1 482 0.0 568
MS.gene20482.t1 MTR_6g013990 64.050 484 118 6 1 430 1 482 0.0 566
MS.gene20482.t1 MTR_6g014300 60.082 486 122 5 1 430 1 470 0.0 558
MS.gene20482.t1 MTR_7g011470 61.364 484 119 3 1 430 1 470 0.0 550
MS.gene20482.t1 MTR_7g011470 60.744 484 118 3 1 430 1 466 0.0 543
MS.gene20482.t1 MTR_6g013440 59.381 485 142 5 1 430 1 485 0.0 543
MS.gene20482.t1 MTR_6g013920 62.112 483 128 6 1 429 1 482 0.0 543
MS.gene20482.t1 MTR_6g013900 61.491 483 131 7 1 429 1 482 0.0 538
MS.gene20482.t1 MTR_8g059425 73.204 362 95 2 1 362 1 360 0.0 536
MS.gene20482.t1 MTR_5g058320 58.557 485 130 6 1 430 1 469 0.0 533
MS.gene20482.t1 MTR_6g014050 60.950 484 134 7 1 429 1 484 0.0 525
MS.gene20482.t1 MTR_6g014220 57.971 483 145 8 1 428 1 480 0.0 522
MS.gene20482.t1 MTR_6g014200 59.916 479 138 6 4 428 1 479 0.0 522
MS.gene20482.t1 MTR_0288s0020 58.678 484 125 8 1 429 1 464 0.0 521
MS.gene20482.t1 MTR_3g008010 57.851 484 146 8 1 429 1 481 0.0 519
MS.gene20482.t1 MTR_6g014150 72.145 359 100 0 4 362 1 359 0.0 518
MS.gene20482.t1 MTR_6g013680 67.632 380 117 2 55 430 2 379 0.0 518
MS.gene20482.t1 MTR_6g014290 57.438 484 148 8 1 429 1 481 0.0 517
MS.gene20482.t1 MTR_6g014250 56.612 484 152 8 1 429 1 481 6.18e-177 503
MS.gene20482.t1 MTR_6g014170 56.818 484 135 8 1 429 1 465 1.74e-174 496
MS.gene20482.t1 MTR_6g014240 54.375 480 135 5 4 429 1 450 1.97e-173 493
MS.gene20482.t1 MTR_6g014160 59.101 445 117 9 1 429 1 396 5.17e-167 475
MS.gene20482.t1 MTR_5g464810 46.570 481 197 7 3 428 5 480 1.59e-141 413
MS.gene20482.t1 MTR_5g064240 46.570 481 197 7 3 428 5 480 1.59e-141 413
MS.gene20482.t1 MTR_0036s0220 46.234 478 197 6 5 427 7 479 8.31e-141 411
MS.gene20482.t1 MTR_5g464760 46.201 487 196 10 1 427 1 481 1.02e-137 403
MS.gene20482.t1 MTR_6g013435 62.620 313 102 4 131 430 1 311 1.87e-129 376
MS.gene20482.t1 MTR_2g008210 52.078 361 162 4 5 362 6 358 7.43e-124 368
MS.gene20482.t1 MTR_2g008210 53.521 71 32 1 358 427 408 478 1.64e-14 75.5
MS.gene20482.t1 MTR_3g479490 40.671 477 221 7 7 426 3 474 7.99e-115 345
MS.gene20482.t1 MTR_3g079480 40.252 477 223 7 7 426 18 489 3.42e-114 343
MS.gene20482.t1 MTR_3g479520 39.004 482 232 7 2 426 7 483 3.82e-112 338
MS.gene20482.t1 MTR_4g094220 41.263 475 215 8 8 422 5 475 9.30e-112 337
MS.gene20482.t1 MTR_8g043470 46.118 425 123 7 59 429 9 381 6.81e-106 318
MS.gene20482.t1 MTR_0199s0010 61.290 248 92 2 1 248 1 244 2.85e-102 306
MS.gene20482.t1 MTR_6g013890 64.000 250 49 4 168 395 14 244 5.43e-101 301
MS.gene20482.t1 MTR_3g479470 38.912 478 225 7 7 425 10 479 9.86e-99 303
MS.gene20482.t1 MTR_6g014195 69.347 199 61 0 1 199 1 199 1.71e-97 291
MS.gene20482.t1 MTR_6g014190 53.448 290 81 4 194 429 1 290 5.37e-93 282
MS.gene20482.t1 MTR_0477s0010 60.515 233 57 2 131 362 1 199 3.69e-86 266
MS.gene20482.t1 MTR_8g007585 61.979 192 69 2 1 192 1 188 7.53e-76 242
MS.gene20482.t1 MTR_8g007585 38.393 336 120 12 168 429 73 395 1.38e-47 168
MS.gene20482.t1 MTR_6g014185 39.540 435 98 11 47 426 21 345 4.77e-69 223
MS.gene20482.t1 MTR_0475s0020 75.758 132 31 1 1 131 1 132 3.39e-66 210
MS.gene20482.t1 MTR_3g479610 37.540 309 136 5 175 426 5 313 3.80e-61 201
MS.gene20482.t1 MTR_3g069710 31.356 472 234 13 12 426 14 452 6.83e-59 199
MS.gene20482.t1 MTR_5g031860 29.735 491 245 14 6 425 8 469 1.82e-52 183
MS.gene20482.t1 MTR_5g031830 28.513 491 252 13 6 425 8 470 1.98e-51 180
MS.gene20482.t1 MTR_0891s0010 33.793 290 135 5 194 426 1 290 9.14e-51 173
MS.gene20482.t1 MTR_5g031840 31.421 366 227 10 9 368 4 351 4.35e-50 176
MS.gene20482.t1 MTR_3g069690 33.149 362 203 11 12 368 10 337 2.45e-49 174
MS.gene20482.t1 MTR_3g479620 47.619 168 83 3 7 174 3 165 6.43e-42 146
MS.gene20482.t1 MTR_6g038240 25.367 477 272 13 9 429 10 458 2.55e-38 144
MS.gene20482.t1 MTR_4g064987 30.189 371 205 13 12 368 10 340 8.14e-38 143
MS.gene20482.t1 MTR_7g080940 25.991 454 248 15 8 404 9 431 1.91e-36 139
MS.gene20482.t1 MTR_7g013220 29.552 335 198 8 9 335 4 308 8.27e-36 137
MS.gene20482.t1 MTR_1g107380 26.287 369 234 10 6 362 9 351 8.80e-36 137
MS.gene20482.t1 MTR_7g013260 30.488 328 193 10 9 335 5 298 4.14e-35 135
MS.gene20482.t1 MTR_4g064987 29.380 371 202 15 12 368 10 334 1.04e-34 134
MS.gene20482.t1 MTR_5g072860 26.360 478 262 17 10 426 18 466 1.26e-34 134
MS.gene20482.t1 MTR_7g013240 29.394 330 193 10 9 335 5 297 1.76e-34 133
MS.gene20482.t1 MTR_7g080935 25.210 476 268 14 8 426 9 453 8.52e-34 132
MS.gene20482.t1 MTR_7g013200 30.056 356 209 12 9 362 4 321 1.35e-33 131
MS.gene20482.t1 MTR_7g080950 23.810 483 270 13 6 426 2 448 2.08e-33 130
MS.gene20482.t1 MTR_5g035580 24.211 475 263 14 10 423 13 451 2.21e-33 130
MS.gene20482.t1 MTR_4g095008 26.211 351 227 11 18 362 19 343 2.27e-33 132
MS.gene20482.t1 MTR_5g035560 23.690 477 269 14 10 426 11 452 3.84e-32 128
MS.gene20482.t1 MTR_6g038300 24.426 479 277 13 6 427 7 457 7.02e-32 126
MS.gene20482.t1 MTR_1g107350 28.375 363 225 12 10 362 8 345 5.95e-31 124
MS.gene20482.t1 MTR_6g038230 25.051 487 259 16 10 430 11 457 9.03e-31 123
MS.gene20482.t1 MTR_1g032490 26.757 370 234 11 10 368 10 353 1.10e-30 123
MS.gene20482.t1 MTR_5g066390 78.378 74 16 0 356 429 145 218 1.34e-30 117
MS.gene20482.t1 MTR_5g066390 82.500 40 7 0 323 362 58 97 2.98e-14 72.0
MS.gene20482.t1 MTR_8g088560 28.726 369 223 12 10 371 10 345 7.59e-30 120
MS.gene20482.t1 MTR_4g094920 27.322 366 232 12 5 362 19 358 4.76e-29 119
MS.gene20482.t1 MTR_1g107365 26.271 354 232 7 10 362 45 370 8.16e-29 118
MS.gene20482.t1 MTR_1g107315 27.123 365 239 9 10 368 8 351 8.21e-29 118
MS.gene20482.t1 MTR_5g075440 25.000 484 259 15 10 426 10 456 2.49e-28 116
MS.gene20482.t1 MTR_3g049970 26.431 367 239 11 10 368 9 352 2.49e-28 117
MS.gene20482.t1 MTR_6g038220 25.105 474 262 16 9 422 10 450 3.42e-28 116
MS.gene20482.t1 MTR_6g038200 24.948 477 258 17 10 422 11 451 6.68e-28 115
MS.gene20482.t1 MTR_8g064870 26.613 372 234 14 4 362 5 350 1.39e-27 114
MS.gene20482.t1 MTR_1g107375 26.331 357 227 10 10 362 8 332 2.96e-27 113
MS.gene20482.t1 MTR_5g016480 27.056 377 226 16 5 362 3 349 5.25e-27 113
MS.gene20482.t1 MTR_8g064880 27.248 367 226 13 12 362 11 352 1.28e-26 112
MS.gene20482.t1 MTR_8g083290 24.395 496 264 18 9 426 2 464 2.22e-26 111
MS.gene20482.t1 MTR_7g013180 24.793 363 227 9 9 362 4 329 1.34e-25 108
MS.gene20482.t1 MTR_7g070860 25.000 480 262 16 15 425 12 462 3.62e-25 107
MS.gene20482.t1 MTR_1g107285 28.804 368 219 15 12 368 10 345 5.03e-25 107
MS.gene20482.t1 MTR_5g072810 23.158 475 273 13 10 425 12 453 2.37e-24 105
MS.gene20482.t1 MTR_5g072830 23.173 479 265 13 10 425 10 448 5.77e-24 103
MS.gene20482.t1 MTR_7g080900 23.542 480 279 17 5 426 7 456 1.42e-23 102
MS.gene20482.t1 MTR_2086s0010 35.465 172 56 4 310 426 1 172 1.68e-23 97.1
MS.gene20482.t1 MTR_1996s0010 35.465 172 56 4 310 426 1 172 1.68e-23 97.1
MS.gene20482.t1 MTR_5g098960 25.683 366 238 13 7 368 4 339 2.38e-23 102
MS.gene20482.t1 MTR_7g070800 24.048 499 267 16 10 425 6 475 2.68e-23 102
MS.gene20482.t1 MTR_1g107360 27.989 368 208 15 12 362 11 338 4.02e-23 101
MS.gene20482.t1 MTR_7g070930 25.740 338 216 10 10 336 14 327 5.23e-23 101
MS.gene20482.t1 MTR_3g031450 24.684 474 261 18 10 426 18 452 8.05e-23 100
MS.gene20482.t1 MTR_7g070740 25.072 347 218 10 2 334 3 321 7.11e-22 98.2
MS.gene20482.t1 MTR_7g070610 24.551 334 220 9 10 334 13 323 1.24e-21 97.4
MS.gene20482.t1 MTR_5g072820 23.967 484 255 18 10 425 10 448 3.54e-21 95.9
MS.gene20482.t1 MTR_7g070910 25.434 346 223 10 2 336 3 324 5.06e-21 95.5
MS.gene20482.t1 MTR_7g117405 27.003 337 208 11 9 334 11 320 6.41e-21 95.1
MS.gene20482.t1 MTR_4g024020 26.171 363 243 12 8 361 7 353 9.04e-21 94.7
MS.gene20482.t1 MTR_7g071040 25.852 352 214 10 2 336 9 330 9.53e-21 94.7
MS.gene20482.t1 MTR_3g031400 24.211 475 260 19 10 426 18 450 1.12e-20 94.4
MS.gene20482.t1 MTR_3g084530 26.133 375 237 12 10 368 6 356 8.57e-20 91.7
MS.gene20482.t1 MTR_6g014000 67.692 65 21 0 356 420 86 150 8.95e-20 91.7
MS.gene20482.t1 MTR_5g004940 24.399 291 151 5 191 425 100 377 1.22e-19 90.5
MS.gene20482.t1 MTR_4g128720 22.899 476 278 14 7 425 12 455 1.65e-19 90.9
MS.gene20482.t1 MTR_7g055710 24.260 507 257 18 10 424 11 482 1.78e-19 90.9
MS.gene20482.t1 MTR_8g083280 24.370 476 277 15 12 426 9 462 2.56e-19 90.5
MS.gene20482.t1 MTR_5g087620 26.098 387 253 13 1 368 1 373 2.72e-19 90.5
MS.gene20482.t1 MTR_7g070660 24.251 334 216 10 10 334 11 316 2.83e-19 90.1
MS.gene20482.t1 MTR_4g128690 23.358 411 223 13 71 425 78 452 1.16e-18 88.2
MS.gene20482.t1 MTR_4g108250 22.656 512 265 19 10 425 11 487 1.35e-18 88.2
MS.gene20482.t1 MTR_7g070780 25.000 336 216 9 10 334 11 321 1.53e-18 88.2
MS.gene20482.t1 MTR_3g084520 26.409 337 210 13 10 334 6 316 3.04e-18 87.0
MS.gene20482.t1 MTR_3g084540 24.494 494 269 18 10 425 6 473 3.44e-18 87.0
MS.gene20482.t1 MTR_7g070940 23.183 509 259 16 7 425 6 472 5.19e-18 86.3
MS.gene20482.t1 MTR_5g045960 24.629 337 227 12 4 333 3 319 9.41e-18 85.5
MS.gene20482.t1 MTR_8g066610 25.683 366 233 14 10 361 9 349 2.68e-17 84.3
MS.gene20482.t1 MTR_7g046490 30.804 224 128 7 134 355 121 319 3.27e-17 84.0
MS.gene20482.t1 MTR_7g102450 25.074 339 205 12 9 337 10 309 3.59e-17 84.0
MS.gene20482.t1 MTR_7g070810 24.332 337 213 10 15 341 14 318 6.12e-17 83.2
MS.gene20482.t1 MTR_1g040310 22.921 493 277 14 11 425 16 483 6.59e-17 83.2
MS.gene20482.t1 MTR_6g035295 23.055 347 208 11 11 334 13 323 8.45e-17 82.8
MS.gene20482.t1 MTR_1g062380 23.377 385 237 11 1 361 7 357 2.35e-16 81.3
MS.gene20482.t1 MTR_5g067170 24.233 326 210 10 15 333 16 311 5.62e-16 80.1
MS.gene20482.t1 MTR_0184s0030 26.364 220 143 4 115 334 105 305 8.90e-16 79.7
MS.gene20482.t1 MTR_5g016660 25.532 376 243 15 1 362 1 353 9.53e-16 79.3
MS.gene20482.t1 MTR_5g040030 22.319 345 217 10 12 337 16 328 1.10e-15 79.3
MS.gene20482.t1 MTR_5g045970 22.616 367 246 11 10 362 16 358 1.15e-15 79.3
MS.gene20482.t1 MTR_4g117960 24.251 334 200 15 15 333 16 311 1.21e-15 79.3
MS.gene20482.t1 MTR_8g465670 23.235 340 210 13 6 334 3 302 1.34e-15 79.0
MS.gene20482.t1 MTR_5g039900 23.529 340 216 10 12 336 15 325 1.70e-15 79.0
MS.gene20482.t1 MTR_4g082810 27.092 251 154 8 123 361 110 343 1.74e-15 78.2
MS.gene20482.t1 MTR_4g485630 22.754 334 220 11 10 334 9 313 1.80e-15 78.6
MS.gene20482.t1 MTR_0184s0040 27.099 262 158 9 121 368 123 365 1.95e-15 78.6
MS.gene20482.t1 MTR_0078s0190 27.099 262 158 9 121 368 123 365 1.95e-15 78.6
MS.gene20482.t1 MTR_0078s0200 26.244 221 144 4 114 334 104 305 2.02e-15 77.0
MS.gene20482.t1 MTR_5g090660 24.478 335 215 13 7 334 2 305 2.47e-15 78.6
MS.gene20482.t1 MTR_2g098430 23.699 346 217 11 7 337 3 316 2.47e-15 78.2
MS.gene20482.t1 MTR_7g102490 25.532 376 229 17 8 361 7 353 2.70e-15 78.2
MS.gene20482.t1 MTR_5g058330 52.113 71 33 1 205 274 1 71 7.25e-15 69.7
MS.gene20482.t1 MTR_0009s0240 26.146 371 230 15 1 361 1 337 7.70e-15 76.6
MS.gene20482.t1 MTR_8g027885 23.214 336 205 10 9 334 17 309 8.57e-15 76.6
MS.gene20482.t1 MTR_7g102460 23.936 376 233 17 8 361 7 351 1.00e-14 76.3
MS.gene20482.t1 MTR_1g107325 22.951 427 236 16 10 425 8 352 1.06e-14 75.5
MS.gene20482.t1 MTR_7g070870 24.625 333 200 12 15 334 24 318 1.68e-14 75.5
MS.gene20482.t1 MTR_6g035185 23.708 329 210 11 15 333 16 313 1.85e-14 75.5
MS.gene20482.t1 MTR_6g035265 25.309 324 202 11 15 333 16 304 2.07e-14 75.5
MS.gene20482.t1 MTR_8g006710 24.793 363 214 14 7 355 3 320 2.39e-14 75.1
MS.gene20482.t1 MTR_6g033615 25.000 236 135 5 136 361 124 327 2.40e-14 75.1
MS.gene20482.t1 MTR_7g047030 28.111 217 133 9 121 334 108 304 6.10e-14 73.9
MS.gene20482.t1 MTR_7g047270 28.111 217 133 9 121 334 108 304 6.10e-14 73.9
MS.gene20482.t1 MTR_7g102550 25.203 369 247 11 10 368 9 358 6.15e-14 73.9
MS.gene20482.t1 MTR_8g077590 28.829 222 124 8 121 334 111 306 1.19e-13 72.8
MS.gene20482.t1 MTR_6g023665 24.548 387 228 14 6 368 9 355 1.90e-13 72.4
MS.gene20482.t1 MTR_6g033625 24.153 236 146 5 136 361 129 341 2.20e-13 72.0
MS.gene20482.t1 MTR_2g034990 23.565 331 208 13 15 333 16 313 2.44e-13 72.0
MS.gene20482.t1 MTR_8g027870 23.653 334 206 9 9 334 17 309 3.10e-13 71.6
MS.gene20482.t1 MTR_8g006230 26.267 217 133 6 122 334 52 245 3.33e-13 70.1
MS.gene20482.t1 MTR_3g009510 24.814 403 233 15 12 382 7 371 3.53e-13 71.6
MS.gene20482.t1 MTR_6g033725 21.408 355 187 9 136 421 126 457 4.40e-13 71.2
MS.gene20482.t1 MTR_8g006220 22.647 340 212 13 6 334 2 301 4.59e-13 71.2
MS.gene20482.t1 MTR_2g035020 21.951 328 217 10 15 333 16 313 1.26e-12 69.7
MS.gene20482.t1 MTR_8g009063 25.346 217 138 5 121 334 115 310 1.34e-12 69.7
MS.gene20482.t1 MTR_5g072850 29.944 177 105 5 185 353 114 279 1.42e-12 69.3
MS.gene20482.t1 MTR_0078s0010 26.389 216 138 6 121 334 108 304 1.90e-12 69.3
MS.gene20482.t1 MTR_7g102520 26.163 344 205 14 10 334 12 325 2.99e-12 68.6
MS.gene20482.t1 MTR_8g006260 25.000 220 137 6 122 335 112 309 3.06e-12 68.6
MS.gene20482.t1 MTR_6g033660 25.359 209 123 5 136 336 129 312 3.08e-12 68.6
MS.gene20482.t1 MTR_8g009050 27.273 220 130 8 121 334 108 303 3.43e-12 68.6
MS.gene20482.t1 MTR_8g006730 33.094 139 80 3 197 334 178 304 3.49e-12 68.6
MS.gene20482.t1 MTR_4g117950 24.024 333 193 12 15 333 11 297 6.18e-12 67.8
MS.gene20482.t1 MTR_8g009073 26.695 236 149 6 121 353 108 322 6.72e-12 67.4
MS.gene20482.t1 MTR_6g005600 25.215 349 196 16 6 335 2 304 7.42e-12 67.4
MS.gene20482.t1 MTR_1g029540 22.564 390 220 17 5 368 9 342 8.41e-12 67.0
MS.gene20482.t1 MTR_5g090630 22.523 333 217 8 7 334 2 298 9.28e-12 67.0
MS.gene20482.t1 MTR_6g013970 47.368 76 32 2 127 198 31 102 1.14e-11 64.3
MS.gene20482.t1 MTR_7g106850 71.053 38 10 1 14 50 143 180 1.16e-11 63.5
MS.gene20482.t1 MTR_6g488280 23.622 381 227 14 12 368 8 348 1.29e-11 66.6
MS.gene20482.t1 MTR_0428s0010 23.622 381 227 14 12 368 8 348 1.29e-11 66.6
MS.gene20482.t1 MTR_5g090700 22.807 342 216 11 7 334 2 309 1.64e-11 66.2
MS.gene20482.t1 MTR_8g009073 30.000 150 92 3 207 353 54 193 1.99e-11 65.5
MS.gene20482.t1 MTR_1g019510 26.724 232 143 6 120 348 108 315 2.85e-11 65.5
MS.gene20482.t1 MTR_2g035040 23.474 213 142 6 124 333 24 218 3.64e-11 65.1
MS.gene20482.t1 MTR_4g082820 24.731 372 223 14 10 361 7 341 3.68e-11 65.1
MS.gene20482.t1 MTR_8g012745 26.606 218 136 6 121 334 109 306 4.20e-11 65.1
MS.gene20482.t1 MTR_7g102560 22.093 344 216 12 10 334 9 319 5.32e-11 64.7
MS.gene20482.t1 MTR_2g008226 23.592 373 247 13 1 361 1 347 5.56e-11 64.7
MS.gene20482.t1 MTR_5g090620 20.334 359 250 9 7 359 2 330 8.06e-11 64.3
MS.gene20482.t1 MTR_4g123553 24.377 361 227 14 10 361 15 338 8.42e-11 63.9
MS.gene20482.t1 MTR_5g098930 22.165 388 233 14 7 368 2 346 9.06e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20482.t1 AT1G22360 43.416 486 213 7 1 429 1 481 1.53e-131 387
MS.gene20482.t1 AT1G22340 43.243 481 210 8 7 429 10 485 6.82e-130 384
MS.gene20482.t1 AT1G22360 43.671 474 217 8 1 429 1 469 1.77e-128 379
MS.gene20482.t1 AT1G22380 41.788 481 218 7 6 429 9 484 7.63e-127 376
MS.gene20482.t1 AT1G22400 42.204 481 215 9 7 429 10 485 5.97e-125 371
MS.gene20482.t1 AT1G22370 42.531 482 210 8 5 429 8 479 6.00e-117 350
MS.gene20482.t1 AT1G78270 39.583 480 226 7 5 426 8 481 6.94e-117 350
MS.gene20482.t1 AT1G22370 38.284 303 130 5 184 429 7 309 2.38e-53 181
MS.gene20482.t1 AT5G59590 29.461 482 238 16 7 425 7 449 3.71e-52 181
MS.gene20482.t1 AT5G59580 28.601 486 244 16 8 430 7 452 3.30e-47 168
MS.gene20482.t1 AT3G11340 28.067 481 242 16 8 426 7 445 5.24e-47 167
MS.gene20482.t1 AT5G05860 26.947 475 256 11 10 427 9 449 1.47e-46 166
MS.gene20482.t1 AT5G05900 31.768 362 211 11 10 368 8 336 2.02e-46 166
MS.gene20482.t1 AT2G36970 30.909 385 227 10 1 371 1 360 5.13e-46 166
MS.gene20482.t1 AT5G05890 32.033 359 207 10 10 362 8 335 1.68e-45 164
MS.gene20482.t1 AT3G46670 28.421 475 242 14 10 423 9 446 2.25e-44 160
MS.gene20482.t1 AT3G46650 28.000 475 229 16 5 420 7 427 2.18e-43 157
MS.gene20482.t1 AT5G05870 30.028 363 223 8 10 368 8 343 9.66e-43 156
MS.gene20482.t1 AT5G05880 30.303 363 216 11 10 368 8 337 1.09e-42 156
MS.gene20482.t1 AT3G55700 28.898 481 237 19 12 426 10 451 7.37e-41 151
MS.gene20482.t1 AT5G38010 28.157 483 255 14 1 423 1 451 1.33e-40 150
MS.gene20482.t1 AT3G46660 32.143 364 205 13 12 368 16 344 3.77e-40 149
MS.gene20482.t1 AT3G46680 30.079 379 204 14 6 368 5 338 3.49e-39 146
MS.gene20482.t1 AT3G02100 26.004 473 283 15 2 425 5 459 6.60e-39 146
MS.gene20482.t1 AT3G46690 29.620 368 216 12 8 368 7 338 1.64e-37 142
MS.gene20482.t1 AT3G21560 25.205 488 268 16 9 425 11 472 3.07e-36 139
MS.gene20482.t1 AT5G38040 29.545 352 202 12 19 362 19 332 4.04e-36 138
MS.gene20482.t1 AT3G46700 29.781 366 213 12 8 368 7 333 4.51e-36 138
MS.gene20482.t1 AT3G46720 32.033 359 198 15 8 362 7 323 2.43e-34 133
MS.gene20482.t1 AT2G26480 28.150 373 214 12 7 368 5 334 4.33e-34 132
MS.gene20482.t1 AT2G28080 27.500 360 233 9 15 368 23 360 4.68e-34 133
MS.gene20482.t1 AT3G55710 30.959 365 201 16 12 362 10 337 6.35e-34 132
MS.gene20482.t1 AT4G15490 26.882 372 223 12 7 362 5 343 3.33e-32 127
MS.gene20482.t1 AT4G15480 28.065 367 220 13 10 362 19 355 9.74e-31 124
MS.gene20482.t1 AT4G15500 26.923 364 224 13 9 362 8 339 2.93e-30 122
MS.gene20482.t1 AT2G23250 25.855 468 247 16 19 425 7 435 4.07e-30 121
MS.gene20482.t1 AT2G43840 25.410 488 258 19 6 428 3 449 3.16e-29 119
MS.gene20482.t1 AT2G31790 27.467 375 221 12 7 368 5 341 2.82e-28 116
MS.gene20482.t1 AT2G43840 25.205 488 259 19 6 428 3 449 3.27e-28 116
MS.gene20482.t1 AT5G37950 28.652 356 200 13 25 368 1 314 4.05e-28 114
MS.gene20482.t1 AT2G23260 23.614 487 280 13 1 427 1 455 3.13e-27 113
MS.gene20482.t1 AT2G43820 24.587 484 265 18 7 428 4 449 3.71e-27 113
MS.gene20482.t1 AT2G30140 24.319 477 262 15 10 425 13 451 6.20e-27 112
MS.gene20482.t1 AT5G37950 28.169 355 197 12 25 368 1 308 8.48e-27 110
MS.gene20482.t1 AT2G30140 24.319 477 261 16 10 425 13 450 1.20e-26 111
MS.gene20482.t1 AT1G05680 23.750 480 263 14 10 424 6 447 1.31e-26 111
MS.gene20482.t1 AT4G34131 26.276 392 218 13 1 361 1 352 1.14e-25 109
MS.gene20482.t1 AT2G31750 24.025 487 269 18 6 426 4 455 1.83e-24 105
MS.gene20482.t1 AT4G34135 27.616 344 218 10 2 334 3 326 1.44e-23 101
MS.gene20482.t1 AT2G31750 25.474 369 234 14 6 368 4 337 1.79e-23 102
MS.gene20482.t1 AT2G36760 27.632 380 223 16 10 368 14 362 1.82e-23 102
MS.gene20482.t1 AT2G30150 23.109 476 270 13 10 425 13 452 2.21e-23 102
MS.gene20482.t1 AT4G34135 27.616 344 218 10 2 334 3 326 2.41e-23 102
MS.gene20482.t1 AT1G05675 23.901 364 246 9 10 371 6 340 3.95e-23 101
MS.gene20482.t1 AT2G30150 22.930 471 267 13 15 425 2 436 3.73e-22 98.6
MS.gene20482.t1 AT2G36800 27.835 388 232 17 1 368 2 361 5.69e-22 98.6
MS.gene20482.t1 AT4G01070 27.083 336 202 10 7 334 5 305 8.10e-22 96.3
MS.gene20482.t1 AT2G36770 25.876 371 226 16 10 361 14 354 8.43e-22 97.8
MS.gene20482.t1 AT4G01070 27.083 336 202 10 7 334 5 305 1.78e-21 97.1
MS.gene20482.t1 AT2G36750 27.056 377 241 14 7 371 6 360 1.79e-21 97.1
MS.gene20482.t1 AT3G22250 23.822 382 245 9 7 371 5 357 4.20e-21 95.5
MS.gene20482.t1 AT1G24100 26.735 389 206 16 6 368 7 342 5.88e-21 95.1
MS.gene20482.t1 AT1G30530 22.382 487 281 13 1 426 1 451 6.73e-21 95.1
MS.gene20482.t1 AT2G36780 27.027 370 223 14 10 361 14 354 2.58e-20 93.6
MS.gene20482.t1 AT2G15480 22.555 501 291 14 1 425 1 480 3.14e-20 93.2
MS.gene20482.t1 AT5G17050 23.222 478 278 15 7 423 9 458 1.46e-19 90.9
MS.gene20482.t1 AT3G53160 25.414 362 239 14 10 361 8 348 2.18e-19 90.5
MS.gene20482.t1 AT4G15550 23.873 377 225 12 9 362 12 349 2.68e-19 90.5
MS.gene20482.t1 AT5G66690 25.000 392 218 14 8 368 5 351 5.05e-19 89.4
MS.gene20482.t1 AT4G34138 22.780 518 256 18 8 427 9 480 7.62e-19 89.0
MS.gene20482.t1 AT2G15480 22.309 511 290 15 1 425 1 490 7.65e-19 89.0
MS.gene20482.t1 AT2G36790 28.947 380 218 16 10 368 13 361 2.63e-18 87.4
MS.gene20482.t1 AT1G05560 23.861 373 232 12 9 368 4 337 1.07e-17 85.5
MS.gene20482.t1 AT5G17040 22.128 470 279 12 10 426 5 440 1.25e-17 85.1
MS.gene20482.t1 AT1G05560 24.397 373 230 14 9 368 54 387 1.34e-17 85.5
MS.gene20482.t1 AT4G14090 22.951 488 271 19 3 424 6 454 2.79e-17 84.0
MS.gene20482.t1 AT5G03490 26.648 364 220 16 6 361 15 339 6.16e-17 83.2
MS.gene20482.t1 AT3G16520 24.696 247 159 7 122 361 113 339 2.36e-16 81.3
MS.gene20482.t1 AT3G16520 24.696 247 159 7 122 361 113 339 2.40e-16 81.3
MS.gene20482.t1 AT1G51210 26.503 366 209 18 8 361 18 335 2.76e-16 80.9
MS.gene20482.t1 AT3G16520 24.696 247 159 7 122 361 113 339 3.06e-16 80.9
MS.gene20482.t1 AT1G05530 23.342 377 234 13 8 368 3 340 3.47e-16 80.9
MS.gene20482.t1 AT5G17040 23.232 297 170 6 181 426 49 338 7.38e-16 79.0
MS.gene20482.t1 AT3G53150 23.140 363 255 10 7 361 19 365 2.58e-15 78.2
MS.gene20482.t1 AT2G23210 25.329 304 187 11 1 299 1 269 5.05e-15 75.5
MS.gene20482.t1 AT1G01390 25.549 364 225 11 9 365 24 348 8.29e-15 76.6
MS.gene20482.t1 AT1G01390 25.549 364 225 11 9 365 7 331 9.67e-15 76.3
MS.gene20482.t1 AT1G10400 26.230 366 225 14 8 361 5 337 1.14e-14 76.3
MS.gene20482.t1 AT3G21780 24.064 374 231 13 8 362 2 341 1.50e-14 75.9
MS.gene20482.t1 AT5G17030 21.111 360 209 8 124 426 115 456 4.34e-14 74.3
MS.gene20482.t1 AT3G50740 23.684 342 207 9 8 335 5 306 6.52e-14 73.9
MS.gene20482.t1 AT1G01420 23.698 384 237 11 9 371 10 358 6.53e-14 73.9
MS.gene20482.t1 AT1G01420 23.698 384 237 11 9 371 7 355 7.21e-14 73.6
MS.gene20482.t1 AT3G21800 22.372 371 238 11 12 362 7 347 3.90e-13 71.6
MS.gene20482.t1 AT3G21760 24.581 358 242 11 12 361 6 343 4.20e-13 71.2
MS.gene20482.t1 AT2G29740 23.607 377 251 11 6 368 4 357 7.27e-12 67.4
MS.gene20482.t1 AT5G12890 23.836 365 228 14 1 349 1 331 1.05e-11 67.0
MS.gene20482.t1 AT4G15260 25.207 242 145 10 135 362 7 226 1.52e-11 65.9
MS.gene20482.t1 AT5G65550 23.056 373 228 13 6 359 5 337 3.60e-11 65.5
MS.gene20482.t1 AT4G15280 23.810 273 167 10 109 362 96 346 4.00e-11 65.1
MS.gene20482.t1 AT4G15280 23.723 274 168 10 108 362 127 378 4.44e-11 65.1

Find 73 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGATCTTCCTACTTTAATT+AGG 0.231984 6.3:-5934166 MS.gene20482:CDS
AGACCATTCTGAAACAATTT+AGG 0.239210 6.3:+5934669 None:intergenic
TCAGCAACTTCTACTGTAAA+TGG 0.239778 6.3:+5934762 None:intergenic
CATCTTTAGATTCTAATCTT+TGG 0.240223 6.3:-5933944 MS.gene20482:CDS
TTATGAAACAAATGGATATT+TGG 0.243463 6.3:-5934234 MS.gene20482:CDS
ATGTAGTGCTTGTTTCTTCT+TGG 0.269212 6.3:-5934706 MS.gene20482:CDS
TTGAAACCATCAAAGGCTTT+TGG 0.275289 6.3:+5934987 None:intergenic
TCTGTTGTTTATGTAAATTT+TGG 0.280760 6.3:-5933873 MS.gene20482:CDS
GCAAAACTTCTTCACCTTAG+AGG 0.292624 6.3:-5935071 MS.gene20482:CDS
GTTTCAACAATGCATTGATA+TGG 0.308101 6.3:+5935096 None:intergenic
CATGGCGAAAATAGAACAAT+TGG 0.344321 6.3:+5934726 None:intergenic
TCAGAAACAAAGCAAGTTAC+TGG 0.351048 6.3:+5934795 None:intergenic
ATATGGCCTTGAACTGGATA+TGG 0.362063 6.3:+5935113 None:intergenic
GAATTGATGGTGGGAGATAA+AGG 0.366402 6.3:-5933456 MS.gene20482:CDS
GCGGACACCAACTTGCTATT+AGG 0.366553 6.3:+5933694 None:intergenic
ATTTGCCAAGAATGGAAGAT+TGG 0.375696 6.3:-5933531 MS.gene20482:intron
AAGGGTCCAAAAGCCTTTGA+TGG 0.381595 6.3:-5934993 MS.gene20482:CDS
ATTAGGCCTGATCTTGTCAT+TGG 0.388944 6.3:-5933768 MS.gene20482:CDS
AGGTTATGTGAAAGCCTCTA+AGG 0.390826 6.3:+5935057 None:intergenic
ACCAGATGGTTTAACTTCAA+TGG 0.396861 6.3:-5934943 MS.gene20482:CDS
TTTCCTTCTCTATACACAAT+TGG 0.399449 6.3:-5934011 MS.gene20482:CDS
GAAATTGTTAGAGTTTGCTT+GGG 0.411975 6.3:-5933826 MS.gene20482:CDS
GCAGATGAGGACACAAGATT+TGG 0.413358 6.3:-5933393 MS.gene20482:CDS
AATTCTATCATCAAGTCATT+AGG 0.416224 6.3:+5934134 None:intergenic
AGAAATTGTTAGAGTTTGCT+TGG 0.416951 6.3:-5933827 MS.gene20482:CDS
TCCATTGAAGTTAAACCATC+TGG 0.423355 6.3:+5934942 None:intergenic
GTGAATGAAATTTCAGATAG+AGG 0.437302 6.3:-5933717 MS.gene20482:CDS
AGTGCTTGTTTCTTCTTGGC+TGG 0.441801 6.3:-5934702 MS.gene20482:CDS
TTTGCCAAGAATGGAAGATT+GGG 0.444354 6.3:-5933530 MS.gene20482:intron
TGCCTTCTTCTTCAACTCCA+TGG 0.445104 6.3:+5933413 None:intergenic
TGATCTTGTCATTGGTGGCT+CGG 0.445782 6.3:-5933760 MS.gene20482:CDS
AGGCCTGATCTTGTCATTGG+TGG 0.464524 6.3:-5933765 MS.gene20482:CDS
GAAACTGATTAATGAATTGA+TGG 0.464761 6.3:-5933469 MS.gene20482:CDS
ATTCCTAAATTGTTTCAGAA+TGG 0.469533 6.3:-5934672 MS.gene20482:CDS
GCATTGATATGGCCTTGAAC+TGG 0.479128 6.3:+5935107 None:intergenic
TACCTCTTCTCTCTTTACAT+TGG 0.485576 6.3:+5933494 None:intergenic
GATGAGAGTTATGAAACAAA+TGG 0.487420 6.3:-5934242 MS.gene20482:CDS
AAGATACTAAATGTCTTGAA+TGG 0.490321 6.3:-5933917 MS.gene20482:CDS
CAAACGTTTGCTCAAATCAA+AGG 0.494520 6.3:-5935012 MS.gene20482:CDS
TTAACTCCATATCCAGTTCA+AGG 0.502163 6.3:-5935119 MS.gene20482:CDS
GAGCCACCAATGACAAGATC+AGG 0.503138 6.3:+5933762 None:intergenic
AGGAAAGAAGATGAGGCAAA+AGG 0.504752 6.3:-5933436 MS.gene20482:CDS
ATAGAATTTATGACTGAAGT+GGG 0.517633 6.3:-5934119 MS.gene20482:CDS
ATGGCGAAAATAGAACAATT+GGG 0.520117 6.3:+5934727 None:intergenic
GATGAGGACACAAGATTTGG+TGG 0.524837 6.3:-5933390 MS.gene20482:CDS
ACCATCTGGTATGGTCTCAA+AGG 0.528576 6.3:+5934956 None:intergenic
CTTCATGAATCTGCTACTGC+TGG 0.533056 6.3:-5934828 MS.gene20482:CDS
TGAAGTTAAACCATCTGGTA+TGG 0.537909 6.3:+5934947 None:intergenic
GAAGATGAGGCAAAAGGCCA+TGG 0.548548 6.3:-5933430 MS.gene20482:CDS
AAACGTTTGCTCAAATCAAA+GGG 0.550312 6.3:-5935011 MS.gene20482:CDS
GGCCATGGAGTTGAAGAAGA+AGG 0.559979 6.3:-5933415 MS.gene20482:CDS
GATGGTTTAACTTCAATGGA+AGG 0.560103 6.3:-5934939 MS.gene20482:CDS
GTTGAAGAAGAAGGCAGATG+AGG 0.560190 6.3:-5933406 MS.gene20482:CDS
TGGTTGTTCATATATGAACT+TGG 0.560604 6.3:-5933370 MS.gene20482:CDS
ATTTGGACACTATAGTTGAT+CGG 0.572230 6.3:-5934217 MS.gene20482:CDS
AAGAAGAAACAAGCACTACA+TGG 0.574532 6.3:+5934708 None:intergenic
GGACCAATTGTGTATAGAGA+AGG 0.575794 6.3:+5934008 None:intergenic
GAGATAAAGGAAAGAAGATG+AGG 0.578725 6.3:-5933443 MS.gene20482:CDS
CCAAGAATGGAAGATTGGGA+TGG 0.581034 6.3:-5933526 MS.gene20482:intron
ACTGATTAATGAATTGATGG+TGG 0.584937 6.3:-5933466 MS.gene20482:CDS
AAAATCATTGAAACCATCAA+AGG 0.587289 6.3:+5934980 None:intergenic
GATAGAATTTATGACTGAAG+TGG 0.596409 6.3:-5934120 MS.gene20482:CDS
CTGATTAATGAATTGATGGT+GGG 0.598725 6.3:-5933465 MS.gene20482:CDS
ACCTTTGAGACCATACCAGA+TGG 0.602303 6.3:-5934957 MS.gene20482:CDS
TAAATGATATTACCTTTGAG+TGG 0.622417 6.3:+5934642 None:intergenic
TACCAATGTAAAGAGAGAAG+AGG 0.629268 6.3:-5933496 MS.gene20482:CDS
AAATTGTTAGAGTTTGCTTG+GGG 0.637062 6.3:-5933825 MS.gene20482:CDS
AATGGTCTACTACCACTCAA+AGG 0.639842 6.3:-5934654 MS.gene20482:intron
TTAACTTCAATGGAAGGTGA+TGG 0.643803 6.3:-5934933 MS.gene20482:CDS
ATTGTATTCAGTGTTGACAA+AGG 0.675767 6.3:+5935037 None:intergenic
GAAACAAAGCAAGTTACTGG+AGG 0.675827 6.3:+5934798 None:intergenic
TATGGAGTTAACACTGCATG+TGG 0.701369 6.3:+5935131 None:intergenic
CTTGGACAAAGTGATCAATG+AGG 0.725106 6.3:-5933352 MS.gene20482:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGAAACAAATGGATATT+TGG - chr6.3:5934253-5934272 MS.gene20482:intron 20.0%
!! TTTGAAAAACTTTAGATTGA+AGG - chr6.3:5934301-5934320 MS.gene20482:intron 20.0%
!!! AATCTAAAGTTTTTCAAAAC+TGG + chr6.3:5934299-5934318 None:intergenic 20.0%
!!! TCTGTTGTTTATGTAAATTT+TGG - chr6.3:5934614-5934633 MS.gene20482:intron 20.0%
! AAAATCATTGAAACCATCAA+AGG + chr6.3:5933510-5933529 None:intergenic 25.0%
! AAGATACTAAATGTCTTGAA+TGG - chr6.3:5934570-5934589 MS.gene20482:intron 25.0%
! AATTCTATCATCAAGTCATT+AGG + chr6.3:5934356-5934375 None:intergenic 25.0%
! ATAGAATTTATGACTGAAGT+GGG - chr6.3:5934368-5934387 MS.gene20482:intron 25.0%
! ATTCCTAAATTGTTTCAGAA+TGG - chr6.3:5933815-5933834 MS.gene20482:CDS 25.0%
! ATTCTCTTCAGTGTTAATTT+GGG - chr6.3:5934144-5934163 MS.gene20482:CDS 25.0%
! CAAATGCGATTATAAATGTT+CGG + chr6.3:5933963-5933982 None:intergenic 25.0%
! CATCTTTAGATTCTAATCTT+TGG - chr6.3:5934543-5934562 MS.gene20482:intron 25.0%
! GAAACTGATTAATGAATTGA+TGG - chr6.3:5935018-5935037 MS.gene20482:CDS 25.0%
! TAAATGATATTACCTTTGAG+TGG + chr6.3:5933848-5933867 None:intergenic 25.0%
!! GAATGTGATTTTATACTTCA+AGG - chr6.3:5934195-5934214 MS.gene20482:CDS 25.0%
!! TCTTTTGTCCTAATTAAAGT+AGG + chr6.3:5934332-5934351 None:intergenic 25.0%
!! TGTATCAAGGTTCTTTAAAA+AGG - chr6.3:5933918-5933937 MS.gene20482:CDS 25.0%
!!! AACCTTTTTTGTGGATTATT+AGG - chr6.3:5934702-5934721 MS.gene20482:CDS 25.0%
AAACGTTTGCTCAAATCAAA+GGG - chr6.3:5933476-5933495 MS.gene20482:CDS 30.0%
ACATCTCTTTGGTAGAAAAA+GGG + chr6.3:5933875-5933894 None:intergenic 30.0%
ACTGATTAATGAATTGATGG+TGG - chr6.3:5935021-5935040 MS.gene20482:CDS 30.0%
AGGATCTTCCTACTTTAATT+AGG - chr6.3:5934321-5934340 MS.gene20482:intron 30.0%
ATGGCGAAAATAGAACAATT+GGG + chr6.3:5933763-5933782 None:intergenic 30.0%
ATTTGGACACTATAGTTGAT+CGG - chr6.3:5934270-5934289 MS.gene20482:intron 30.0%
GATAGAATTTATGACTGAAG+TGG - chr6.3:5934367-5934386 MS.gene20482:intron 30.0%
GATGAGAGTTATGAAACAAA+TGG - chr6.3:5934245-5934264 MS.gene20482:intron 30.0%
GATTCTCTTCAGTGTTAATT+TGG - chr6.3:5934143-5934162 MS.gene20482:CDS 30.0%
GTAGAATTATTTGCCAAGAA+TGG - chr6.3:5934948-5934967 MS.gene20482:CDS 30.0%
GTGAATGAAATTTCAGATAG+AGG - chr6.3:5934770-5934789 MS.gene20482:CDS 30.0%
TGACTTAAAAACGAAGCAAA+CGG + chr6.3:5934503-5934522 None:intergenic 30.0%
TGGCAAATAATTCTACTGTT+AGG + chr6.3:5934944-5934963 None:intergenic 30.0%
TGGTTGTTCATATATGAACT+TGG - chr6.3:5935117-5935136 MS.gene20482:CDS 30.0%
TTTCCTTCTCTATACACAAT+TGG - chr6.3:5934476-5934495 MS.gene20482:intron 30.0%
! AAAGATGTCAAGTGATTTTG+CGG + chr6.3:5934530-5934549 None:intergenic 30.0%
! AAATTGTTAGAGTTTGCTTG+GGG - chr6.3:5934662-5934681 MS.gene20482:CDS 30.0%
! AGAAATTGTTAGAGTTTGCT+TGG - chr6.3:5934660-5934679 MS.gene20482:CDS 30.0%
! CTGATTAATGAATTGATGGT+GGG - chr6.3:5935022-5935041 MS.gene20482:CDS 30.0%
! GAAATTGTTAGAGTTTGCTT+GGG - chr6.3:5934661-5934680 MS.gene20482:CDS 30.0%
! GTTTCAACAATGCATTGATA+TGG + chr6.3:5933394-5933413 None:intergenic 30.0%
!! AGACCATTCTGAAACAATTT+AGG + chr6.3:5933821-5933840 None:intergenic 30.0%
!! ATTGTATTCAGTGTTGACAA+AGG + chr6.3:5933453-5933472 None:intergenic 30.0%
!!! AAGAACTTTCGTCACTTTTT+TGG - chr6.3:5933620-5933639 MS.gene20482:intron 30.0%
AAAAATGGCCTACACAACAT+TGG + chr6.3:5934908-5934927 None:intergenic 35.0%
AAGAAGAAACAAGCACTACA+TGG + chr6.3:5933782-5933801 None:intergenic 35.0%
ATTTGCCAAGAATGGAAGAT+TGG - chr6.3:5934956-5934975 MS.gene20482:CDS 35.0%
CAAACGTTTGCTCAAATCAA+AGG - chr6.3:5933475-5933494 MS.gene20482:CDS 35.0%
CACATCTCTTTGGTAGAAAA+AGG + chr6.3:5933876-5933895 None:intergenic 35.0%
CATACATACACACATCTCTT+TGG + chr6.3:5933886-5933905 None:intergenic 35.0%
CATGGCGAAAATAGAACAAT+TGG + chr6.3:5933764-5933783 None:intergenic 35.0%
GAAGTTGCATCAACTTCATT+TGG - chr6.3:5933982-5934001 MS.gene20482:CDS 35.0%
GAGATAAAGGAAAGAAGATG+AGG - chr6.3:5935044-5935063 MS.gene20482:CDS 35.0%
GGCCTAATAATCCACAAAAA+AGG + chr6.3:5934707-5934726 None:intergenic 35.0%
GGTAGTTGATCAGCAAAAAA+TGG + chr6.3:5934923-5934942 None:intergenic 35.0%
TACCAATGTAAAGAGAGAAG+AGG - chr6.3:5934991-5935010 MS.gene20482:CDS 35.0%
TACCTCTTCTCTCTTTACAT+TGG + chr6.3:5934996-5935015 None:intergenic 35.0%
TCAGAAACAAAGCAAGTTAC+TGG + chr6.3:5933695-5933714 None:intergenic 35.0%
TCAGCAACTTCTACTGTAAA+TGG + chr6.3:5933728-5933747 None:intergenic 35.0%
TCCATTGAAGTTAAACCATC+TGG + chr6.3:5933548-5933567 None:intergenic 35.0%
TGAAGTTAAACCATCTGGTA+TGG + chr6.3:5933543-5933562 None:intergenic 35.0%
TTAACTCCATATCCAGTTCA+AGG - chr6.3:5933368-5933387 MS.gene20482:CDS 35.0%
TTAACTTCAATGGAAGGTGA+TGG - chr6.3:5933554-5933573 MS.gene20482:intron 35.0%
TTTGCCAAGAATGGAAGATT+GGG - chr6.3:5934957-5934976 MS.gene20482:CDS 35.0%
! ACCAGATGGTTTAACTTCAA+TGG - chr6.3:5933544-5933563 MS.gene20482:intron 35.0%
! ATGTAGTGCTTGTTTCTTCT+TGG - chr6.3:5933781-5933800 MS.gene20482:CDS 35.0%
! CAAAAAAGGTTTCTTGCTGT+TGG + chr6.3:5934693-5934712 None:intergenic 35.0%
! GATGGTTTAACTTCAATGGA+AGG - chr6.3:5933548-5933567 MS.gene20482:intron 35.0%
! TCTTCAGTGTTAATTTGGGT+GGG - chr6.3:5934148-5934167 MS.gene20482:CDS 35.0%
! TTGAAACCATCAAAGGCTTT+TGG + chr6.3:5933503-5933522 None:intergenic 35.0%
!!! ACAGCAAGAAACCTTTTTTG+TGG - chr6.3:5934693-5934712 MS.gene20482:CDS 35.0%
AATGGTCTACTACCACTCAA+AGG - chr6.3:5933833-5933852 MS.gene20482:CDS 40.0%
AGGAAAGAAGATGAGGCAAA+AGG - chr6.3:5935051-5935070 MS.gene20482:CDS 40.0%
AGGTTATGTGAAAGCCTCTA+AGG + chr6.3:5933433-5933452 None:intergenic 40.0%
ATAGAGGCCTAATAGCAAGT+TGG - chr6.3:5934786-5934805 MS.gene20482:CDS 40.0%
ATTAGGCCTGATCTTGTCAT+TGG - chr6.3:5934719-5934738 MS.gene20482:CDS 40.0%
CTTGGACAAAGTGATCAATG+AGG - chr6.3:5935135-5935154 MS.gene20482:CDS 40.0%
GAAACAAAGCAAGTTACTGG+AGG + chr6.3:5933692-5933711 None:intergenic 40.0%
GCAAAACTTCTTCACCTTAG+AGG - chr6.3:5933416-5933435 MS.gene20482:CDS 40.0%
GGACCAATTGTGTATAGAGA+AGG + chr6.3:5934482-5934501 None:intergenic 40.0%
GTGTGTGTTTGTGTGTATCA+AGG - chr6.3:5933905-5933924 MS.gene20482:CDS 40.0%
GTGTTGAACCATCCTTCAAT+CGG - chr6.3:5934824-5934843 MS.gene20482:CDS 40.0%
TATGGAGTTAACACTGCATG+TGG + chr6.3:5933359-5933378 None:intergenic 40.0%
TGGTTCAACACTTTCTCTTG+CGG + chr6.3:5934815-5934834 None:intergenic 40.0%
! ATATGGCCTTGAACTGGATA+TGG + chr6.3:5933377-5933396 None:intergenic 40.0%
! CTCTTCAGTGTTAATTTGGG+TGG - chr6.3:5934147-5934166 MS.gene20482:CDS 40.0%
! CTTCAGTGTTAATTTGGGTG+GGG - chr6.3:5934149-5934168 MS.gene20482:CDS 40.0%
!! GAATTGATGGTGGGAGATAA+AGG - chr6.3:5935031-5935050 MS.gene20482:CDS 40.0%
AAAGGTCCTCGAACGCAATA+TGG - chr6.3:5933936-5933955 MS.gene20482:CDS 45.0%
AAGGGTCCAAAAGCCTTTGA+TGG - chr6.3:5933494-5933513 MS.gene20482:CDS 45.0%
ACCATCTGGTATGGTCTCAA+AGG + chr6.3:5933534-5933553 None:intergenic 45.0%
AGGTCCCAAATCAATACCAC+CGG + chr6.3:5934091-5934110 None:intergenic 45.0%
CCAAGAATGGAAGATTGGGA+TGG - chr6.3:5934961-5934980 MS.gene20482:CDS 45.0%
CCATCCCAATCTTCCATTCT+TGG + chr6.3:5934964-5934983 None:intergenic 45.0%
CTTCATGAATCTGCTACTGC+TGG - chr6.3:5933659-5933678 MS.gene20482:intron 45.0%
GATGAGGACACAAGATTTGG+TGG - chr6.3:5935097-5935116 MS.gene20482:CDS 45.0%
GATTCTTGACTCATTGCGGA+TGG - chr6.3:5934849-5934868 MS.gene20482:CDS 45.0%
GCAGATGAGGACACAAGATT+TGG - chr6.3:5935094-5935113 MS.gene20482:CDS 45.0%
GTTGAAGAAGAAGGCAGATG+AGG - chr6.3:5935081-5935100 MS.gene20482:CDS 45.0%
TAAACCCACTTGAGTTAGCC+CGG - chr6.3:5934069-5934088 MS.gene20482:CDS 45.0%
TGCCTTCTTCTTCAACTCCA+TGG + chr6.3:5935077-5935096 None:intergenic 45.0%
TTGAACCATCCTTCAATCGG+CGG - chr6.3:5934827-5934846 MS.gene20482:CDS 45.0%
! ACCACTGAAAGTGTATGTGC+CGG - chr6.3:5934878-5934897 MS.gene20482:CDS 45.0%
! AGTGCTTGTTTCTTCTTGGC+TGG - chr6.3:5933785-5933804 MS.gene20482:CDS 45.0%
! GCATTGATATGGCCTTGAAC+TGG + chr6.3:5933383-5933402 None:intergenic 45.0%
! TGATCTTGTCATTGGTGGCT+CGG - chr6.3:5934727-5934746 MS.gene20482:CDS 45.0%
!! ACCTTTGAGACCATACCAGA+TGG - chr6.3:5933530-5933549 MS.gene20482:intron 45.0%
!! GTGGTATTGATTTGGGACCT+GGG - chr6.3:5934091-5934110 MS.gene20482:CDS 45.0%
!! TAGCCCGGTGGTATTGATTT+GGG - chr6.3:5934084-5934103 MS.gene20482:CDS 45.0%
!! TTAGCCCGGTGGTATTGATT+TGG - chr6.3:5934083-5934102 MS.gene20482:CDS 45.0%
AGGCCTGATCTTGTCATTGG+TGG - chr6.3:5934722-5934741 MS.gene20482:CDS 50.0%
CCTACACAACATTGGCACTC+CGG + chr6.3:5934900-5934919 None:intergenic 50.0%
GAAGATGAGGCAAAAGGCCA+TGG - chr6.3:5935057-5935076 MS.gene20482:CDS 50.0%
GAGCCACCAATGACAAGATC+AGG + chr6.3:5934728-5934747 None:intergenic 50.0%
GGCCATGGAGTTGAAGAAGA+AGG - chr6.3:5935072-5935091 MS.gene20482:CDS 50.0%
GGTCCCAAATCAATACCACC+GGG + chr6.3:5934090-5934109 None:intergenic 50.0%
TCCGGCACATACACTTTCAG+TGG + chr6.3:5934882-5934901 None:intergenic 50.0%
TTCGGTCCATATTGCGTTCG+AGG + chr6.3:5933945-5933964 None:intergenic 50.0%
! AGAATCCGCCGATTGAAGGA+TGG + chr6.3:5934835-5934854 None:intergenic 50.0%
! GGCGGATTCTTGACTCATTG+CGG - chr6.3:5934845-5934864 MS.gene20482:CDS 50.0%
! GTCAAGAATCCGCCGATTGA+AGG + chr6.3:5934839-5934858 None:intergenic 50.0%
!! GCGGACACCAACTTGCTATT+AGG + chr6.3:5934796-5934815 None:intergenic 50.0%
!! GGTGGTATTGATTTGGGACC+TGG - chr6.3:5934090-5934109 MS.gene20482:CDS 50.0%
ACCACCGGGCTAACTCAAGT+GGG + chr6.3:5934076-5934095 None:intergenic 55.0%
GAATCGAACCTGAGACCTCG+AGG + chr6.3:5934128-5934147 None:intergenic 55.0%
TACCACCGGGCTAACTCAAG+TGG + chr6.3:5934077-5934096 None:intergenic 55.0%
! CCGGAGTGCCAATGTTGTGT+AGG - chr6.3:5934897-5934916 MS.gene20482:CDS 55.0%
ACCCACTTGAGTTAGCCCGG+TGG - chr6.3:5934072-5934091 MS.gene20482:CDS 60.0%
ATGCTCCTCCTCGAGGTCTC+AGG - chr6.3:5934117-5934136 MS.gene20482:CDS 60.0%
TCGAACCTGAGACCTCGAGG+AGG + chr6.3:5934125-5934144 None:intergenic 60.0%
! TCGAGGAGGAGCATACTCCC+AGG + chr6.3:5934111-5934130 None:intergenic 60.0%
! TGGGAGTATGCTCCTCCTCG+AGG - chr6.3:5934110-5934129 MS.gene20482:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 5933332 5935177 5933332 ID=MS.gene20482
chr6.3 mRNA 5933332 5935177 5933332 ID=MS.gene20482.t1;Parent=MS.gene20482
chr6.3 exon 5934655 5935177 5934655 ID=MS.gene20482.t1.exon1;Parent=MS.gene20482.t1
chr6.3 CDS 5934655 5935177 5934655 ID=cds.MS.gene20482.t1;Parent=MS.gene20482.t1
chr6.3 exon 5933706 5934263 5933706 ID=MS.gene20482.t1.exon2;Parent=MS.gene20482.t1
chr6.3 CDS 5933706 5934263 5933706 ID=cds.MS.gene20482.t1;Parent=MS.gene20482.t1
chr6.3 exon 5933332 5933543 5933332 ID=MS.gene20482.t1.exon3;Parent=MS.gene20482.t1
chr6.3 CDS 5933332 5933543 5933332 ID=cds.MS.gene20482.t1;Parent=MS.gene20482.t1
Gene Sequence

>MS.gene20482

ATGAGTAACTTTGCAAAGAGAAAACCACATGCAGTGTTAACTCCATATCCAGTTCAAGGCCATATCAATGCATTGTTGAAACTAGCAAAACTTCTTCACCTTAGAGGCTTTCACATAACCTTTGTCAACACTGAATACAATCACAAACGTTTGCTCAAATCAAAGGGTCCAAAAGCCTTTGATGGTTTCAATGATTTTACCTTTGAGACCATACCAGATGGTTTAACTTCAATGGAAGGTGATGGTGATGTTAGTCAAGATTTACGTGCTCTTTGTCGATCAATCATCAAGAACTTTCGTCACTTTTTTGGTGAACTTTTTGCTAAACTTCATGAATCTGCTACTGCTGGTTATATACCTCCAGTAACTTGCTTTGTTTCTGATTGCTATATGCCATTTACAGTAGAAGTTGCTGAAGAACATTCACTCCCAATTGTTCTATTTTCGCCATGTAGTGCTTGTTTCTTCTTGGCTGGTTTTCATATTCCTAAATTGTTTCAGAATGGTCTACTACCACTCAAAGGTAATATCATTTATAATCCCTTTTTCTACCAAAGAGATGTGTGTATGTATGTGTGTGTTTGTGTGTATCAAGGTTCTTTAAAAAGGTCCTCGAACGCAATATGGACCGAACATTTATAATCGCATTTGAAGTTGCATCAACTTCATTTGGTTGCGATTACACACAATAATAATACGATGATACAACGACAATTATTATTGAGAATGTGATTTTATAAACCCACTTGAGTTAGCCCGGTGGTATTGATTTGGGACCTGGGAGTATGCTCCTCCTCGAGGTCTCAGGTTCGATTCTCTTCAGTGTTAATTTGGGTGGGGTAATTTAGCTTCTTAAAAAAAAAGAATGTGATTTTATACTTCAAGGTATTTACTTGTTGAATTATGATATGCAGATGAGAGTTATGAAACAAATGGATATTTGGACACTATAGTTGATCGGATACCAGTTTTGAAAAACTTTAGATTGAAGGATCTTCCTACTTTAATTAGGACAAAAGATCCTAATGACTTGATGATAGAATTTATGACTGAAGTGGGAGATAAATGTCACAAAGCTTCTGCTATTGTTTTCAACACTTCTTATGAACTTGAGAGTGATGTTATGAATGCTCTTAGTTCTATATTTCCTTCTCTATACACAATTGGTCCGTTTGCTTCGTTTTTAAGTCAAAGTCCGCAAAATCACTTGACATCTTTAGATTCTAATCTTTGGAAAGAAGATACTAAATGTCTTGAATGGCTTGAATCAAAAGAATCAAAATCTGTTGTTTATGTAAATTTTGGCAGCATCATAGTTATGTCTCAAGAGAAATTGTTAGAGTTTGCTTGGGGTTTAGCCAACAGCAAGAAACCTTTTTTGTGGATTATTAGGCCTGATCTTGTCATTGGTGGCTCGGTTGTTTTGTCATCAGAGTTTGTGAATGAAATTTCAGATAGAGGCCTAATAGCAAGTTGGTGTCCGCAAGAGAAAGTGTTGAACCATCCTTCAATCGGCGGATTCTTGACTCATTGCGGATGGAACTCAACCACTGAAAGTGTATGTGCCGGAGTGCCAATGTTGTGTAGGCCATTTTTTGCTGATCAACTACCTAACAGTAGAATTATTTGCCAAGAATGGAAGATTGGGATGGAAATTGATACCAATGTAAAGAGAGAAGAGGTAGAGAAACTGATTAATGAATTGATGGTGGGAGATAAAGGAAAGAAGATGAGGCAAAAGGCCATGGAGTTGAAGAAGAAGGCAGATGAGGACACAAGATTTGGTGGTTGTTCATATATGAACTTGGACAAAGTGATCAATGAGGTCTTGCTTAAACAATATTAG

Protein sequence

>MS.gene20482.t1

MSNFAKRKPHAVLTPYPVQGHINALLKLAKLLHLRGFHITFVNTEYNHKRLLKSKGPKAFDGFNDFTFETIPDGLTSMEGDGDVSQDLRALCRSIIKNFRHFFGELFAKLHESATAGYIPPVTCFVSDCYMPFTVEVAEEHSLPIVLFSPCSACFFLAGFHIPKLFQNGLLPLKDESYETNGYLDTIVDRIPVLKNFRLKDLPTLIRTKDPNDLMIEFMTEVGDKCHKASAIVFNTSYELESDVMNALSSIFPSLYTIGPFASFLSQSPQNHLTSLDSNLWKEDTKCLEWLESKESKSVVYVNFGSIIVMSQEKLLEFAWGLANSKKPFLWIIRPDLVIGGSVVLSSEFVNEISDRGLIAKWKIGMEIDTNVKREEVEKLINELMVGDKGKKMRQKAMELKKKADEDTRFGGCSYMNLDKVINEVLLKQY