Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037902.t1 | XP_013467257.1 | 93.3 | 599 | 40 | 0 | 1 | 599 | 1 | 599 | 2.00E-254 | 888.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037902.t1 | Q9M8Z5 | 64.6 | 568 | 187 | 5 | 1 | 564 | 1 | 558 | 1.7e-161 | 570.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037902.t1 | A0A072VI64 | 93.3 | 599 | 40 | 0 | 1 | 599 | 1 | 599 | 1.5e-254 | 888.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037902.t1 | MTR_1g048030 | 95.900 | 561 | 23 | 0 | 39 | 599 | 39 | 599 | 0.0 | 1026 |
MS.gene037902.t1 | MTR_2g079510 | 34.848 | 396 | 225 | 7 | 125 | 513 | 197 | 566 | 6.36e-60 | 209 |
MS.gene037902.t1 | MTR_4g081850 | 38.676 | 287 | 153 | 3 | 125 | 411 | 189 | 452 | 8.74e-58 | 203 |
MS.gene037902.t1 | MTR_4g050490 | 27.389 | 314 | 188 | 5 | 136 | 411 | 162 | 473 | 2.83e-27 | 117 |
MS.gene037902.t1 | MTR_7g056733 | 86.000 | 50 | 7 | 0 | 39 | 88 | 39 | 88 | 3.68e-21 | 88.6 |
MS.gene037902.t1 | MTR_7g094890 | 29.268 | 205 | 123 | 5 | 144 | 346 | 119 | 303 | 8.59e-14 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037902.t1 | AT3G07050 | 64.950 | 602 | 180 | 8 | 1 | 595 | 1 | 578 | 0.0 | 662 |
MS.gene037902.t1 | AT1G52980 | 38.235 | 306 | 166 | 3 | 125 | 430 | 199 | 481 | 1.07e-58 | 206 |
MS.gene037902.t1 | AT2G27200 | 28.479 | 309 | 188 | 5 | 136 | 411 | 161 | 469 | 1.04e-30 | 127 |
MS.gene037902.t1 | AT1G08410 | 27.900 | 319 | 193 | 5 | 136 | 417 | 161 | 479 | 3.17e-30 | 125 |
MS.gene037902.t1 | AT4G02790 | 29.720 | 286 | 153 | 10 | 144 | 412 | 118 | 372 | 1.48e-15 | 79.3 |
Find 127 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTGCTCGCCTCAATTT+TGG | 0.124286 | 1.1:+31357087 | None:intergenic |
TTCAATTCCTGTTCCTTAAA+AGG | 0.143573 | 1.1:+31362396 | None:intergenic |
AAAGCAATACATGACGTTTA+TGG | 0.143814 | 1.1:+31361002 | None:intergenic |
AATAGTGAAACTTCATTTAT+TGG | 0.146286 | 1.1:-31357737 | MS.gene037902:CDS |
TTGCAGAGAGTAAGAGTAAA+AGG | 0.149807 | 1.1:-31362554 | MS.gene037902:intron |
TATGCTCTTTCACTTTCTTT+AGG | 0.222156 | 1.1:+31362505 | None:intergenic |
CTTCAAGTACCTGGGCTAAT+TGG | 0.236805 | 1.1:+31359335 | None:intergenic |
CAAAGTTGATTACTTCAAAA+AGG | 0.273492 | 1.1:-31357001 | MS.gene037902:CDS |
TCTTGTTTCAGGCTCGTAAA+AGG | 0.281841 | 1.1:-31361371 | MS.gene037902:intron |
TACAGATTGTGGCTACTGTT+AGG | 0.291683 | 1.1:-31358036 | MS.gene037902:CDS |
AGAAGCCGTTTCAACTGAAT+TGG | 0.312062 | 1.1:+31361317 | None:intergenic |
TAGGGCCTTTGCCAGTGATT+TGG | 0.321863 | 1.1:-31361131 | MS.gene037902:CDS |
ATAGTGAAACTTCATTTATT+GGG | 0.325794 | 1.1:-31357736 | MS.gene037902:CDS |
AAGCAATACATGACGTTTAT+GGG | 0.328299 | 1.1:+31361003 | None:intergenic |
ACTGGAGGCATAGTATAATA+TGG | 0.337606 | 1.1:+31357836 | None:intergenic |
AGAACGTGCTCTTGCTGAAT+TGG | 0.338023 | 1.1:-31362355 | MS.gene037902:CDS |
TCCTTAAAAGGCCAATCATT+TGG | 0.343965 | 1.1:+31362408 | None:intergenic |
ATTATACTATGCCTCCAGTT+AGG | 0.353971 | 1.1:-31357832 | MS.gene037902:CDS |
GACATCAATCACTGTTGGTT+TGG | 0.362256 | 1.1:-31359582 | MS.gene037902:CDS |
CAATGATGAGGATGAATCTA+TGG | 0.362444 | 1.1:-31357202 | MS.gene037902:CDS |
CTTTGATGAGACAATGTTAG+AGG | 0.363951 | 1.1:-31357654 | MS.gene037902:intron |
AGAAAACTCTGAAACTATCT+TGG | 0.371936 | 1.1:+31357787 | None:intergenic |
GTCGATGTCAGTGCTAGTGC+TGG | 0.375077 | 1.1:-31359500 | MS.gene037902:CDS |
GTTCTTCATGACTGGAATAT+AGG | 0.376417 | 1.1:-31357962 | MS.gene037902:intron |
CCTTGATGCCCGGGATCCCT+TGG | 0.391586 | 1.1:-31361071 | MS.gene037902:CDS |
TTGCCCTGGTGTTGTCATGC+TGG | 0.392424 | 1.1:-31359423 | MS.gene037902:CDS |
CTTTGCCAGTGATTTGGATC+AGG | 0.403021 | 1.1:-31361125 | MS.gene037902:CDS |
ACAGATTGTGGCTACTGTTA+GGG | 0.404092 | 1.1:-31358035 | MS.gene037902:CDS |
TCAATCACTGTTGGTTTGGT+TGG | 0.404100 | 1.1:-31359578 | MS.gene037902:CDS |
TTTCCATAGATAGTTCAGAT+AGG | 0.404505 | 1.1:-31361150 | MS.gene037902:intron |
CGCAACAGTAGGAACAGTTT+CGG | 0.415285 | 1.1:+31361284 | None:intergenic |
AACACCGAGGTTCCCATGTC+TGG | 0.423048 | 1.1:-31356916 | MS.gene037902:CDS |
GGTTCTCCTTGATCCCTAAC+TGG | 0.438774 | 1.1:+31357818 | None:intergenic |
TTATACTATGCCTCCAGTTA+GGG | 0.449445 | 1.1:-31357831 | MS.gene037902:CDS |
TACTAGAGGTCCTTGATGCC+CGG | 0.453164 | 1.1:-31361081 | MS.gene037902:CDS |
AACGAGTACCCAAGGGATCC+CGG | 0.456156 | 1.1:+31361062 | None:intergenic |
GTCAAAGCAAGAGATTCGTT+TGG | 0.461640 | 1.1:-31359468 | MS.gene037902:CDS |
CTTGATGCCCGGGATCCCTT+GGG | 0.462440 | 1.1:-31361070 | MS.gene037902:CDS |
AGCCAGCTCATCTGATCCTA+TGG | 0.465306 | 1.1:-31357040 | MS.gene037902:CDS |
ATCCTGGTATTCCAAATGAT+TGG | 0.467524 | 1.1:-31362419 | MS.gene037902:CDS |
CAAGAATCGTTCTTCATGAC+TGG | 0.469526 | 1.1:-31357970 | MS.gene037902:CDS |
GGCCAATCATTTGGAATACC+AGG | 0.469715 | 1.1:+31362417 | None:intergenic |
ACTGTTGCGAAGACTAATAA+AGG | 0.470225 | 1.1:-31361270 | MS.gene037902:intron |
TCATTGTCATCAACATTCTC+AGG | 0.473233 | 1.1:+31357219 | None:intergenic |
TCAATTAAGTGGTAAGAAGA+AGG | 0.475631 | 1.1:-31362451 | MS.gene037902:CDS |
AGAAAGAAGCTCGTAAAGAA+AGG | 0.477638 | 1.1:-31362326 | MS.gene037902:CDS |
TTCCATAGATAGTTCAGATA+GGG | 0.481540 | 1.1:-31361149 | MS.gene037902:intron |
AGACTACTCTTACCAACATT+GGG | 0.485202 | 1.1:+31359551 | None:intergenic |
TGATAAAGAGGATGTTAGCA+AGG | 0.486446 | 1.1:-31357175 | MS.gene037902:CDS |
CAGGCTCGTAAAAGGAAGGC+GGG | 0.492005 | 1.1:-31361363 | MS.gene037902:CDS |
AAGACTACTCTTACCAACAT+TGG | 0.493721 | 1.1:+31359550 | None:intergenic |
TCATCAACTGAATCAAAACT+TGG | 0.498766 | 1.1:+31358064 | None:intergenic |
ATGCCTCCAGTTAGGGATCA+AGG | 0.503827 | 1.1:-31357824 | MS.gene037902:CDS |
AAGATGAGAGGGCAACTTGA+AGG | 0.504734 | 1.1:+31357674 | None:intergenic |
TAACTCCAATTCAGTTGAAA+CGG | 0.507020 | 1.1:-31361322 | MS.gene037902:CDS |
ATCTATGGAAAGTGATAAAG+AGG | 0.508499 | 1.1:-31357187 | MS.gene037902:CDS |
TGCAGAGAGTAAGAGTAAAA+GGG | 0.510138 | 1.1:-31362553 | MS.gene037902:intron |
ATCAACCTCAACACCAGACA+TGG | 0.513629 | 1.1:+31356903 | None:intergenic |
AAGAAGGTTGAGAAAGATCC+TGG | 0.515836 | 1.1:-31362435 | MS.gene037902:CDS |
CCAAGGGATCCCGGGCATCA+AGG | 0.518140 | 1.1:+31361071 | None:intergenic |
GGATGACAAAGCAGTTAAGT+TGG | 0.529915 | 1.1:-31357259 | MS.gene037902:CDS |
AGAGGATGTTAGCAAGGAGA+AGG | 0.531320 | 1.1:-31357169 | MS.gene037902:CDS |
GAAAGAAGCTCGTAAAGAAA+GGG | 0.534276 | 1.1:-31362325 | MS.gene037902:intron |
AGAGATATCAGCACCCTAGC+GGG | 0.534816 | 1.1:+31358097 | None:intergenic |
TTCTCAAGCTCTGTCCCGCT+AGG | 0.535798 | 1.1:-31358111 | MS.gene037902:CDS |
ACTAGAGGTCCTTGATGCCC+GGG | 0.544113 | 1.1:-31361080 | MS.gene037902:CDS |
CTCAAGACATCAATCACTGT+TGG | 0.544568 | 1.1:-31359587 | MS.gene037902:CDS |
GAAACTATCTTGGCCTCTGA+AGG | 0.545238 | 1.1:+31357797 | None:intergenic |
GTCCATAGGATCAGATGAGC+TGG | 0.552881 | 1.1:+31357038 | None:intergenic |
TGTTAGGGGCAAGCTCAAGA+AGG | 0.553084 | 1.1:-31358020 | MS.gene037902:CDS |
TGATGACTTCCTACAGATTG+TGG | 0.555283 | 1.1:-31358047 | MS.gene037902:CDS |
TTGGTTGGACTGCCCAATGT+TGG | 0.564722 | 1.1:-31359563 | MS.gene037902:CDS |
CTCGAGAGTCAGTTGAGAAG+TGG | 0.566914 | 1.1:-31360873 | MS.gene037902:CDS |
GTTAAGTTGCTGGATTGCCC+TGG | 0.568716 | 1.1:-31359437 | MS.gene037902:CDS |
GGTTCCCATGTCTGGTGTTG+AGG | 0.568722 | 1.1:-31356908 | MS.gene037902:CDS |
TGCACTTGAAAGCGACAGTA+GGG | 0.569257 | 1.1:+31360827 | None:intergenic |
ACGAGTACCCAAGGGATCCC+GGG | 0.570844 | 1.1:+31361063 | None:intergenic |
CTGCACTTGAAAGCGACAGT+AGG | 0.571229 | 1.1:+31360826 | None:intergenic |
ACATGATCTAACTCAACAGT+AGG | 0.573759 | 1.1:+31357704 | None:intergenic |
TCGATGTCAGTGCTAGTGCT+GGG | 0.574430 | 1.1:-31359499 | MS.gene037902:CDS |
TTGCAATTAAGTGATTGTCT+CGG | 0.574961 | 1.1:-31360745 | MS.gene037902:CDS |
CTGATCCAAATCACTGGCAA+AGG | 0.574966 | 1.1:+31361126 | None:intergenic |
TTATTAGTCTTCGCAACAGT+AGG | 0.576810 | 1.1:+31361273 | None:intergenic |
GAGTCCAGCATGACAACACC+AGG | 0.578166 | 1.1:+31359419 | None:intergenic |
AAGGAAGGCGGGGTTGCCAG+TGG | 0.578828 | 1.1:-31361352 | MS.gene037902:CDS |
TAAAGAGTTTAACATTGATG+AGG | 0.580829 | 1.1:-31357765 | MS.gene037902:CDS |
AGGACACGATGGATGCTGAC+GGG | 0.582177 | 1.1:-31356981 | MS.gene037902:CDS |
AAGTCATAATCACCGTCCAT+AGG | 0.588888 | 1.1:+31357024 | None:intergenic |
GTGCTAGTGCTGGGTCGACA+AGG | 0.591514 | 1.1:-31359490 | MS.gene037902:CDS |
GTTTCAGGCTCGTAAAAGGA+AGG | 0.594629 | 1.1:-31361367 | MS.gene037902:intron |
TCTCAAGCTCTGTCCCGCTA+GGG | 0.595120 | 1.1:-31358110 | MS.gene037902:CDS |
AACACCAGACATGGGAACCT+CGG | 0.595303 | 1.1:+31356912 | None:intergenic |
GAGAAGTTATATACAGCGGA+AGG | 0.595344 | 1.1:-31357120 | MS.gene037902:CDS |
GTATACTTAATCCAAAATTG+AGG | 0.598349 | 1.1:-31357098 | MS.gene037902:CDS |
GTTAACACAACGAGTACCCA+AGG | 0.598523 | 1.1:+31361054 | None:intergenic |
AATAACCTGATCCAAATCAC+TGG | 0.599929 | 1.1:+31361120 | None:intergenic |
AAGTTGGCAAAACAAGATGA+AGG | 0.603504 | 1.1:-31357243 | MS.gene037902:CDS |
TTGTCTCATCAAAGATGAGA+GGG | 0.604223 | 1.1:+31357663 | None:intergenic |
CAGATTGTGGCTACTGTTAG+GGG | 0.604493 | 1.1:-31358034 | MS.gene037902:CDS |
CACTTCTCAACTGACTCTCG+AGG | 0.609711 | 1.1:+31360874 | None:intergenic |
TTGGAGTTATCATCATCCAC+TGG | 0.612027 | 1.1:+31361336 | None:intergenic |
TTAGCTGATCCAATTAGCCC+AGG | 0.614684 | 1.1:-31359344 | MS.gene037902:intron |
TAACAGTAGCCACAATCTGT+AGG | 0.620654 | 1.1:+31358038 | None:intergenic |
GTTAGGGGCAAGCTCAAGAA+GGG | 0.621289 | 1.1:-31358019 | MS.gene037902:CDS |
AGCTCATCTGATCCTATGGA+CGG | 0.632650 | 1.1:-31357036 | MS.gene037902:CDS |
ATTGTCTCATCAAAGATGAG+AGG | 0.635020 | 1.1:+31357662 | None:intergenic |
AAGGACACGATGGATGCTGA+CGG | 0.635872 | 1.1:-31356982 | MS.gene037902:CDS |
TAGCACTGACATCGACAGCA+TGG | 0.638654 | 1.1:+31359507 | None:intergenic |
CAGTAGGGAATTCTTCTCGA+AGG | 0.646359 | 1.1:+31360842 | None:intergenic |
AGGGGCAAGCTCAAGAAGGG+TGG | 0.649554 | 1.1:-31358016 | MS.gene037902:CDS |
TCAGGCTCGTAAAAGGAAGG+CGG | 0.649927 | 1.1:-31361364 | MS.gene037902:intron |
GAATTATGCAAGAAGCGACA+AGG | 0.656552 | 1.1:-31360695 | MS.gene037902:intron |
TCAACCTCAACACCAGACAT+GGG | 0.660182 | 1.1:+31356904 | None:intergenic |
GGATCAAGGAGAACCTTCAG+AGG | 0.661640 | 1.1:-31357810 | MS.gene037902:CDS |
AGAGTCTGATGTCATACTAG+AGG | 0.662679 | 1.1:-31361095 | MS.gene037902:CDS |
ATGGATGCTGACGGGAGTGA+CGG | 0.668896 | 1.1:-31356973 | MS.gene037902:CDS |
TCTCCTTGATCCCTAACTGG+AGG | 0.671867 | 1.1:+31357821 | None:intergenic |
ACTTCTCAACTGACTCTCGA+GGG | 0.678144 | 1.1:+31360875 | None:intergenic |
AGGCTCGTAAAAGGAAGGCG+GGG | 0.684944 | 1.1:-31361362 | MS.gene037902:CDS |
TTAACACAACGAGTACCCAA+GGG | 0.685445 | 1.1:+31361055 | None:intergenic |
GATGCTGACGGGAGTGACGG+TGG | 0.688567 | 1.1:-31356970 | MS.gene037902:CDS |
AAATGAGAAGTTATATACAG+CGG | 0.699343 | 1.1:-31357124 | MS.gene037902:CDS |
GACGGTGGTGACGACAATGA+TGG | 0.707599 | 1.1:-31356955 | MS.gene037902:CDS |
GAATGTTGATGACAATGATG+AGG | 0.708173 | 1.1:-31357214 | MS.gene037902:CDS |
AAGAGATATCAGCACCCTAG+CGG | 0.715395 | 1.1:+31358096 | None:intergenic |
AGTCCAGCATGACAACACCA+GGG | 0.773850 | 1.1:+31359420 | None:intergenic |
TGATGAACAAGTCAACACCG+AGG | 0.841599 | 1.1:-31356929 | MS.gene037902:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAATGAACTTA+TGG | - | chr1.1:31357687-31357706 | MS.gene037902:CDS | 10.0% |
!! | AAACCTTATTATTATTATTA+GGG | - | chr1.1:31359177-31359196 | MS.gene037902:intron | 10.0% |
!! | AAATAAGAGAATTAATTAAT+GGG | + | chr1.1:31360261-31360280 | None:intergenic | 10.0% |
!! | TAAATAAGAGAATTAATTAA+TGG | + | chr1.1:31360262-31360281 | None:intergenic | 10.0% |
!!! | ATTAATTAATTCTCTTATTT+AGG | - | chr1.1:31360261-31360280 | MS.gene037902:intron | 10.0% |
!!! | TTATAAATTTTTCTTACTTT+CGG | + | chr1.1:31361680-31361699 | None:intergenic | 10.0% |
!!! | TTTAGTTTAAACTTTAAAAT+TGG | - | chr1.1:31360685-31360704 | MS.gene037902:intron | 10.0% |
!! | AACATAAAAAATAAAAAGAG+AGG | + | chr1.1:31358924-31358943 | None:intergenic | 15.0% |
!! | AATAAGAGAATTAATTAATG+GGG | + | chr1.1:31360260-31360279 | None:intergenic | 15.0% |
!! | ACATAAAAAATAAAAAGAGA+GGG | + | chr1.1:31358923-31358942 | None:intergenic | 15.0% |
!! | AGATTAAAAATTACAATGAA+AGG | + | chr1.1:31362192-31362211 | None:intergenic | 15.0% |
!! | ATTTATTGTTTGAAAATTGA+TGG | - | chr1.1:31357309-31357328 | MS.gene037902:intron | 15.0% |
!! | GAAACCTTATTATTATTATT+AGG | - | chr1.1:31359176-31359195 | MS.gene037902:intron | 15.0% |
!! | TATGTTAAAACATTAGTATA+AGG | - | chr1.1:31361958-31361977 | MS.gene037902:intron | 15.0% |
!! | TTTATTGTTTGAAAATTGAT+GGG | - | chr1.1:31357310-31357329 | MS.gene037902:intron | 15.0% |
!! | TTTCCCTAATAATAATAATA+AGG | + | chr1.1:31359183-31359202 | None:intergenic | 15.0% |
!!! | AAAAATTAAATTTTGTGAGA+TGG | - | chr1.1:31357344-31357363 | MS.gene037902:intron | 15.0% |
!!! | AAAATTAAATTTTGTGAGAT+GGG | - | chr1.1:31357345-31357364 | MS.gene037902:intron | 15.0% |
!!! | AGTTCATTTTTTTTTTTTGA+AGG | + | chr1.1:31357685-31357704 | None:intergenic | 15.0% |
!!! | GCAATTTTAATTAAATTTTG+TGG | - | chr1.1:31360476-31360495 | MS.gene037902:intron | 15.0% |
!!! | TAATACTGATAATTGTTTTT+AGG | - | chr1.1:31360436-31360455 | MS.gene037902:intron | 15.0% |
!! | AATAGTGAAACTTCATTTAT+TGG | - | chr1.1:31361821-31361840 | MS.gene037902:intron | 20.0% |
!! | ACTTCTAGTATTACAATTTA+TGG | - | chr1.1:31359904-31359923 | MS.gene037902:intron | 20.0% |
!! | ATAAGAGAATTAATTAATGG+GGG | + | chr1.1:31360259-31360278 | None:intergenic | 20.0% |
!! | ATAATCACTAAAATGTAGAA+TGG | + | chr1.1:31359856-31359875 | None:intergenic | 20.0% |
!! | ATAATTTCTGCATAAGAAAA+TGG | + | chr1.1:31360352-31360371 | None:intergenic | 20.0% |
!! | ATAGTGAAACTTCATTTATT+GGG | - | chr1.1:31361822-31361841 | MS.gene037902:intron | 20.0% |
!! | ATTTCAAAATTCAGATTTCA+AGG | + | chr1.1:31361365-31361384 | None:intergenic | 20.0% |
!! | GATTAATTAACTAGAACTAT+TGG | - | chr1.1:31357963-31357982 | MS.gene037902:CDS | 20.0% |
!! | TAATTACTAAAGAGAACAAT+AGG | + | chr1.1:31361136-31361155 | None:intergenic | 20.0% |
!! | TCAAATCAAATCAAATCAAA+AGG | + | chr1.1:31356978-31356997 | None:intergenic | 20.0% |
!! | TTGTGTTAACATAGAAAAAA+GGG | - | chr1.1:31358517-31358536 | MS.gene037902:intron | 20.0% |
!! | TTGTTTGTATAATTAAAGTG+AGG | - | chr1.1:31359029-31359048 | MS.gene037902:intron | 20.0% |
!!! | AATAAGTTGAAAACAACTTA+TGG | - | chr1.1:31357650-31357669 | MS.gene037902:intron | 20.0% |
!!! | ATTTTGTACTTTTTCTTCAA+TGG | + | chr1.1:31357033-31357052 | None:intergenic | 20.0% |
!!! | GTATTGCTTTTGAATAAAAT+TGG | - | chr1.1:31358569-31358588 | MS.gene037902:intron | 20.0% |
!!! | TAAAAGTACAGATAAAAACT+AGG | + | chr1.1:31360979-31360998 | None:intergenic | 20.0% |
!!! | TAATATTCGATTTGATTGAT+GGG | - | chr1.1:31362065-31362084 | MS.gene037902:intron | 20.0% |
!!! | TAGTTGAAGTATATTTTATG+AGG | - | chr1.1:31357499-31357518 | MS.gene037902:intron | 20.0% |
!!! | TATTTTATGAGGATTAGATT+TGG | - | chr1.1:31357510-31357529 | MS.gene037902:intron | 20.0% |
!!! | TGTTCAGATCAAATATTTTT+GGG | - | chr1.1:31358340-31358359 | MS.gene037902:intron | 20.0% |
!!! | TTAATATTCGATTTGATTGA+TGG | - | chr1.1:31362064-31362083 | MS.gene037902:intron | 20.0% |
!!! | TTGTTCAGATCAAATATTTT+TGG | - | chr1.1:31358339-31358358 | MS.gene037902:intron | 20.0% |
! | AAAACATGTATAGAATCTCA+AGG | + | chr1.1:31360600-31360619 | None:intergenic | 25.0% |
! | AAATGAGAAGTTATATACAG+CGG | - | chr1.1:31362434-31362453 | MS.gene037902:CDS | 25.0% |
! | AAATTGAAGAAGTGATGAAA+GGG | + | chr1.1:31356929-31356948 | None:intergenic | 25.0% |
! | ACTCAAAAGGTAAAGATAAT+AGG | + | chr1.1:31360647-31360666 | None:intergenic | 25.0% |
! | AGACAAAGCCAAAATAATTA+CGG | + | chr1.1:31359945-31359964 | None:intergenic | 25.0% |
! | ATAATAAGAGTTATGCTAAC+CGG | + | chr1.1:31359369-31359388 | None:intergenic | 25.0% |
! | ATATCTTGTAAAATTGACGA+GGG | + | chr1.1:31359516-31359535 | None:intergenic | 25.0% |
! | ATGAAAAAAATATTCCCAGA+AGG | + | chr1.1:31358628-31358647 | None:intergenic | 25.0% |
! | ATTCATATGCTTTGTATTTC+TGG | - | chr1.1:31359429-31359448 | MS.gene037902:CDS | 25.0% |
! | ATTTATAATTGCACTGTTTC+AGG | - | chr1.1:31361692-31361711 | MS.gene037902:intron | 25.0% |
! | CAATATATTTAGCACTCAAA+AGG | + | chr1.1:31360660-31360679 | None:intergenic | 25.0% |
! | CTAGATAAGTCAATCTAAAT+AGG | - | chr1.1:31357755-31357774 | MS.gene037902:CDS | 25.0% |
! | CTGGAAAAACAAATTGAAAA+GGG | + | chr1.1:31362280-31362299 | None:intergenic | 25.0% |
! | GGTCTTTATTCTTTAATCAA+CGG | + | chr1.1:31360916-31360935 | None:intergenic | 25.0% |
! | GTATACTTAATCCAAAATTG+AGG | - | chr1.1:31362460-31362479 | MS.gene037902:CDS | 25.0% |
! | GTTGTGTTAACATAGAAAAA+AGG | - | chr1.1:31358516-31358535 | MS.gene037902:intron | 25.0% |
! | TAAAGAGTTTAACATTGATG+AGG | - | chr1.1:31361793-31361812 | MS.gene037902:intron | 25.0% |
! | TATATCTTGTAAAATTGACG+AGG | + | chr1.1:31359517-31359536 | None:intergenic | 25.0% |
! | TCAAATCAAATCAAAAGGAT+TGG | + | chr1.1:31356973-31356992 | None:intergenic | 25.0% |
! | TCAGTGTTATGTAATTTCTA+TGG | - | chr1.1:31359554-31359573 | MS.gene037902:CDS | 25.0% |
! | TCATAAATCAAATTTCAACC+AGG | + | chr1.1:31360952-31360971 | None:intergenic | 25.0% |
! | TGAAAAAAATATTCCCAGAA+GGG | + | chr1.1:31358627-31358646 | None:intergenic | 25.0% |
! | TGCATAAAGAAACAAACAAA+TGG | + | chr1.1:31359685-31359704 | None:intergenic | 25.0% |
!! | AATTTTTCTTACTTTCGGAA+AGG | + | chr1.1:31361675-31361694 | None:intergenic | 25.0% |
!! | CAAAGTTGATTACTTCAAAA+AGG | - | chr1.1:31362557-31362576 | MS.gene037902:intron | 25.0% |
!! | CAATCAAAATCTCAGAATTT+TGG | + | chr1.1:31362123-31362142 | None:intergenic | 25.0% |
!! | CTATTTTGCCGTAATTATTT+TGG | - | chr1.1:31359934-31359953 | MS.gene037902:intron | 25.0% |
!! | GGATGTTATCAATACTATTT+TGG | - | chr1.1:31359135-31359154 | MS.gene037902:intron | 25.0% |
!! | TCTTATTTAGGTCTTCATAT+TGG | - | chr1.1:31360273-31360292 | MS.gene037902:intron | 25.0% |
!! | TTTTGTGGAATTGAAACTAA+GGG | - | chr1.1:31360724-31360743 | MS.gene037902:CDS | 25.0% |
!! | TTTTTGTGGAATTGAAACTA+AGG | - | chr1.1:31360723-31360742 | MS.gene037902:CDS | 25.0% |
!!! | ATACATGTTTCTTTTGAAGT+TGG | - | chr1.1:31361629-31361648 | MS.gene037902:intron | 25.0% |
!!! | CAAAATTCTGAGATTTTGAT+TGG | - | chr1.1:31362121-31362140 | MS.gene037902:intron | 25.0% |
!!! | TCTATTTTTAACTCCTTAAC+CGG | - | chr1.1:31359330-31359349 | MS.gene037902:intron | 25.0% |
!!! | TTCTTTTGAAGTTGGAAATT+AGG | - | chr1.1:31361637-31361656 | MS.gene037902:intron | 25.0% |
AAAGAGGTTACATGAAGTTT+GGG | - | chr1.1:31360835-31360854 | MS.gene037902:CDS | 30.0% | |
AAAGATCCATCGATATAGTA+AGG | - | chr1.1:31360866-31360885 | MS.gene037902:CDS | 30.0% | |
AAAGCAATACATGACGTTTA+TGG | + | chr1.1:31358559-31358578 | None:intergenic | 30.0% | |
AACACACTACAAACTGAATA+GGG | + | chr1.1:31362233-31362252 | None:intergenic | 30.0% | |
AACAGCAAAAATCAAACCTA+GGG | - | chr1.1:31358760-31358779 | MS.gene037902:intron | 30.0% | |
AAGATCCATCGATATAGTAA+GGG | - | chr1.1:31360867-31360886 | MS.gene037902:CDS | 30.0% | |
AAGCAATACATGACGTTTAT+GGG | + | chr1.1:31358558-31358577 | None:intergenic | 30.0% | |
AAGGAGAAACATGAATGATA+AGG | + | chr1.1:31359481-31359500 | None:intergenic | 30.0% | |
AATTTGGCACTTGTATGTTT+GGG | - | chr1.1:31359711-31359730 | MS.gene037902:intron | 30.0% | |
ACCTCTTTCAAATAAGAACT+AGG | + | chr1.1:31360823-31360842 | None:intergenic | 30.0% | |
AGAAGTGAAGTTACAAGAAT+TGG | + | chr1.1:31359890-31359909 | None:intergenic | 30.0% | |
AGAGAAGAAGAAAAAGAAGA+AGG | - | chr1.1:31362488-31362507 | MS.gene037902:CDS | 30.0% | |
AGATAATAGGTTACTGGTAT+TGG | + | chr1.1:31360634-31360653 | None:intergenic | 30.0% | |
AGGAGAAACATGAATGATAA+GGG | + | chr1.1:31359480-31359499 | None:intergenic | 30.0% | |
AGGTAAAGATAATAGGTTAC+TGG | + | chr1.1:31360640-31360659 | None:intergenic | 30.0% | |
ATCTATGGAAAGTGATAAAG+AGG | - | chr1.1:31362371-31362390 | MS.gene037902:CDS | 30.0% | |
ATTAACCTCATTATCCAAAC+AGG | + | chr1.1:31357550-31357569 | None:intergenic | 30.0% | |
ATTTCTGCATAAGAAAATGG+AGG | + | chr1.1:31360349-31360368 | None:intergenic | 30.0% | |
CAATTAACTAACTAGAAAGC+AGG | + | chr1.1:31361225-31361244 | None:intergenic | 30.0% | |
CCTGGAAAAACAAATTGAAA+AGG | + | chr1.1:31362281-31362300 | None:intergenic | 30.0% | |
GAAATTGAAGAAGTGATGAA+AGG | + | chr1.1:31356930-31356949 | None:intergenic | 30.0% | |
GAAGTGAAGTTACAAGAATT+GGG | + | chr1.1:31359889-31359908 | None:intergenic | 30.0% | |
GATAATAGGTTACTGGTATT+GGG | + | chr1.1:31360633-31360652 | None:intergenic | 30.0% | |
GCTAAAAAGCTTCAATTAAG+TGG | - | chr1.1:31357096-31357115 | MS.gene037902:CDS | 30.0% | |
GTATAGAATCTCAAGGTAAA+GGG | + | chr1.1:31360593-31360612 | None:intergenic | 30.0% | |
TAACACACTACAAACTGAAT+AGG | + | chr1.1:31362234-31362253 | None:intergenic | 30.0% | |
TAACTCCAATTCAGTTGAAA+CGG | - | chr1.1:31358236-31358255 | MS.gene037902:intron | 30.0% | |
TATGCTCTTTCACTTTCTTT+AGG | + | chr1.1:31357056-31357075 | None:intergenic | 30.0% | |
TATGTTGTGTTATGACTGTA+TGG | - | chr1.1:31358094-31358113 | MS.gene037902:CDS | 30.0% | |
TCAATTAAGTGGTAAGAAGA+AGG | - | chr1.1:31357107-31357126 | MS.gene037902:CDS | 30.0% | |
TCATCAACTGAATCAAAACT+TGG | + | chr1.1:31361497-31361516 | None:intergenic | 30.0% | |
TCTTTATGCATGCATGAATT+TGG | - | chr1.1:31359695-31359714 | MS.gene037902:intron | 30.0% | |
TCTTTCAAATAAGAACTAGG+TGG | + | chr1.1:31360820-31360839 | None:intergenic | 30.0% | |
TGGATAATGAGGTTAATTGA+GGG | - | chr1.1:31357553-31357572 | MS.gene037902:intron | 30.0% | |
TGTATAGAATCTCAAGGTAA+AGG | + | chr1.1:31360594-31360613 | None:intergenic | 30.0% | |
TTAACATAGAAAAAAGGGTG+AGG | - | chr1.1:31358522-31358541 | MS.gene037902:intron | 30.0% | |
TTAACCTCATTATCCAAACA+GGG | + | chr1.1:31357549-31357568 | None:intergenic | 30.0% | |
TTCAATTCCTGTTCCTTAAA+AGG | + | chr1.1:31357165-31357184 | None:intergenic | 30.0% | |
TTCCATAGATAGTTCAGATA+GGG | - | chr1.1:31358409-31358428 | MS.gene037902:intron | 30.0% | |
TTGCAATTAAGTGATTGTCT+CGG | - | chr1.1:31358813-31358832 | MS.gene037902:intron | 30.0% | |
TTGGATAATGAGGTTAATTG+AGG | - | chr1.1:31357552-31357571 | MS.gene037902:intron | 30.0% | |
TTTCCATAGATAGTTCAGAT+AGG | - | chr1.1:31358408-31358427 | MS.gene037902:intron | 30.0% | |
TTTCTGCATAAGAAAATGGA+GGG | + | chr1.1:31360348-31360367 | None:intergenic | 30.0% | |
! | AAATTGACACGCATCTATTT+TGG | - | chr1.1:31361993-31362012 | MS.gene037902:intron | 30.0% |
! | ACCTAGTTCTTATTTGAAAG+AGG | - | chr1.1:31360819-31360838 | MS.gene037902:CDS | 30.0% |
! | CAAAATCTCAGAATTTTGGA+GGG | + | chr1.1:31362119-31362138 | None:intergenic | 30.0% |
! | CAGCATTTGTGAAACTTTTT+AGG | + | chr1.1:31357729-31357748 | None:intergenic | 30.0% |
! | CGATACTTTTCATGTTATAC+TGG | - | chr1.1:31359748-31359767 | MS.gene037902:intron | 30.0% |
! | CTATTACACTATTTTCTCTC+TGG | - | chr1.1:31361000-31361019 | MS.gene037902:CDS | 30.0% |
! | CTTGAGATTACAAGTTTTAC+CGG | + | chr1.1:31357826-31357845 | None:intergenic | 30.0% |
! | GGAAGTCTAATCCTTTTTAT+TGG | - | chr1.1:31361406-31361425 | MS.gene037902:intron | 30.0% |
! | TCAAAATCTCAGAATTTTGG+AGG | + | chr1.1:31362120-31362139 | None:intergenic | 30.0% |
! | TTAGTATAAGGAAAGTGTGT+TGG | - | chr1.1:31361970-31361989 | MS.gene037902:intron | 30.0% |
! | TTGAGATTACAAGTTTTACC+GGG | + | chr1.1:31357825-31357844 | None:intergenic | 30.0% |
!! | AGAAAACTCTGAAACTATCT+TGG | + | chr1.1:31361774-31361793 | None:intergenic | 30.0% |
!! | ATCAGAGATGTTACTTTATG+TGG | - | chr1.1:31359080-31359099 | MS.gene037902:intron | 30.0% |
!! | CCTTTTCAATTTGTTTTTCC+AGG | - | chr1.1:31362278-31362297 | MS.gene037902:intron | 30.0% |
!! | GTATAACATGAAAAGTATCG+TGG | + | chr1.1:31359748-31359767 | None:intergenic | 30.0% |
!! | TCAGAGATGTTACTTTATGT+GGG | - | chr1.1:31359081-31359100 | MS.gene037902:intron | 30.0% |
!!! | TGATTTTTTTAGATCTCCCT+AGG | + | chr1.1:31358779-31358798 | None:intergenic | 30.0% |
!!! | TTGAAGCTTTTTAGCTTCTT+TGG | + | chr1.1:31357091-31357110 | None:intergenic | 30.0% |
AAATATTCCCAGAAGGGAAA+AGG | + | chr1.1:31358621-31358640 | None:intergenic | 35.0% | |
AAGACTACTCTTACCAACAT+TGG | + | chr1.1:31360011-31360030 | None:intergenic | 35.0% | |
AAGAGGTTACATGAAGTTTG+GGG | - | chr1.1:31360836-31360855 | MS.gene037902:CDS | 35.0% | |
AAGCAGGATCAATATTGTGA+AGG | + | chr1.1:31361209-31361228 | None:intergenic | 35.0% | |
AAGTCATGTCTTAGTGCTTT+AGG | + | chr1.1:31361076-31361095 | None:intergenic | 35.0% | |
AAGTTGGCAAAACAAGATGA+AGG | - | chr1.1:31362315-31362334 | MS.gene037902:intron | 35.0% | |
AATAACCTGATCCAAATCAC+TGG | + | chr1.1:31358441-31358460 | None:intergenic | 35.0% | |
AATATTCCCAGAAGGGAAAA+GGG | + | chr1.1:31358620-31358639 | None:intergenic | 35.0% | |
ACATGATCTAACTCAACAGT+AGG | + | chr1.1:31361857-31361876 | None:intergenic | 35.0% | |
ACTGTTGCGAAGACTAATAA+AGG | - | chr1.1:31358288-31358307 | MS.gene037902:intron | 35.0% | |
AGAAAGAAGCTCGTAAAGAA+AGG | - | chr1.1:31357232-31357251 | MS.gene037902:CDS | 35.0% | |
AGACTACTCTTACCAACATT+GGG | + | chr1.1:31360010-31360029 | None:intergenic | 35.0% | |
AGGGAGCTAAAACTAACTTA+AGG | + | chr1.1:31362100-31362119 | None:intergenic | 35.0% | |
ATCCTGGTATTCCAAATGAT+TGG | - | chr1.1:31357139-31357158 | MS.gene037902:CDS | 35.0% | |
ATGGATGAAAAGATAGGATC+AGG | + | chr1.1:31361165-31361184 | None:intergenic | 35.0% | |
ATTATACTATGCCTCCAGTT+AGG | - | chr1.1:31361726-31361745 | MS.gene037902:intron | 35.0% | |
ATTGTCTCATCAAAGATGAG+AGG | + | chr1.1:31361899-31361918 | None:intergenic | 35.0% | |
CAACAGCAAAAATCAAACCT+AGG | - | chr1.1:31358759-31358778 | MS.gene037902:intron | 35.0% | |
CAACGGAACTTGAATACAAT+GGG | + | chr1.1:31360899-31360918 | None:intergenic | 35.0% | |
CAATGATGAGGATGAATCTA+TGG | - | chr1.1:31362356-31362375 | MS.gene037902:CDS | 35.0% | |
CACTGCATTGTCCAATAAAA+AGG | + | chr1.1:31361420-31361439 | None:intergenic | 35.0% | |
CAGCTTACATAAGCACTTAT+AGG | + | chr1.1:31357599-31357618 | None:intergenic | 35.0% | |
CAGTATTAGAGTCTAGAAGA+GGG | + | chr1.1:31360424-31360443 | None:intergenic | 35.0% | |
CGGTAAAACTTGTAATCTCA+AGG | - | chr1.1:31357824-31357843 | MS.gene037902:CDS | 35.0% | |
CTGGGTTAAGGAGTTATAAA+AGG | - | chr1.1:31359226-31359245 | MS.gene037902:intron | 35.0% | |
CTTTGATGAGACAATGTTAG+AGG | - | chr1.1:31361904-31361923 | MS.gene037902:intron | 35.0% | |
GAAAGAAGCTCGTAAAGAAA+GGG | - | chr1.1:31357233-31357252 | MS.gene037902:CDS | 35.0% | |
GAAAGAGGTTACATGAAGTT+TGG | - | chr1.1:31360834-31360853 | MS.gene037902:CDS | 35.0% | |
GAACTAAGCTCAAGTTACTT+TGG | - | chr1.1:31357846-31357865 | MS.gene037902:CDS | 35.0% | |
GAATTTGGCACTTGTATGTT+TGG | - | chr1.1:31359710-31359729 | MS.gene037902:intron | 35.0% | |
GAGAATTAATTAATGGGGGA+AGG | + | chr1.1:31360255-31360274 | None:intergenic | 35.0% | |
GTTATCATGATCTCAGTTGA+AGG | - | chr1.1:31360559-31360578 | MS.gene037902:intron | 35.0% | |
GTTCTTCATGACTGGAATAT+AGG | - | chr1.1:31361596-31361615 | MS.gene037902:intron | 35.0% | |
TCAACGGAACTTGAATACAA+TGG | + | chr1.1:31360900-31360919 | None:intergenic | 35.0% | |
TCAGTATTAGAGTCTAGAAG+AGG | + | chr1.1:31360425-31360444 | None:intergenic | 35.0% | |
TCATTGTCATCAACATTCTC+AGG | + | chr1.1:31362342-31362361 | None:intergenic | 35.0% | |
TCCTTAAAAGGCCAATCATT+TGG | + | chr1.1:31357153-31357172 | None:intergenic | 35.0% | |
TGATAAAGAGGATGTTAGCA+AGG | - | chr1.1:31362383-31362402 | MS.gene037902:CDS | 35.0% | |
TGCAGAGAGTAAGAGTAAAA+GGG | - | chr1.1:31357005-31357024 | MS.gene037902:CDS | 35.0% | |
TTACTTCAAAAAGGACACGA+TGG | - | chr1.1:31362566-31362585 | MS.gene037902:intron | 35.0% | |
TTATACTATGCCTCCAGTTA+GGG | - | chr1.1:31361727-31361746 | MS.gene037902:intron | 35.0% | |
TTGCAGAGAGTAAGAGTAAA+AGG | - | chr1.1:31357004-31357023 | MS.gene037902:CDS | 35.0% | |
TTGTCTCATCAAAGATGAGA+GGG | + | chr1.1:31361898-31361917 | None:intergenic | 35.0% | |
! | ACTGGAGGCATAGTATAATA+TGG | + | chr1.1:31361725-31361744 | None:intergenic | 35.0% |
! | GATCCTATCTTTTCATCCAT+CGG | - | chr1.1:31361165-31361184 | MS.gene037902:intron | 35.0% |
! | GGACAAAAATGTTAAGTTGC+TGG | - | chr1.1:31360111-31360130 | MS.gene037902:intron | 35.0% |
! | GTAATGCTACTTGAAATGGA+TGG | - | chr1.1:31360297-31360316 | MS.gene037902:intron | 35.0% |
! | TAGAAGCACATGTAATGAGA+GGG | + | chr1.1:31361034-31361053 | None:intergenic | 35.0% |
! | TCATGTCTAACTCTTGTTTC+AGG | - | chr1.1:31358176-31358195 | MS.gene037902:intron | 35.0% |
! | TGGAGTAATGCTACTTGAAA+TGG | - | chr1.1:31360293-31360312 | MS.gene037902:intron | 35.0% |
! | TTAGAAGCACATGTAATGAG+AGG | + | chr1.1:31361035-31361054 | None:intergenic | 35.0% |
! | TTTTGGATGGTCTGTTTGTA+TGG | - | chr1.1:31362010-31362029 | MS.gene037902:intron | 35.0% |
!! | GAATGTTGATGACAATGATG+AGG | - | chr1.1:31362344-31362363 | MS.gene037902:CDS | 35.0% |
!! | TAGGGTCTCTTTTGATTCAA+AGG | + | chr1.1:31362215-31362234 | None:intergenic | 35.0% |
!! | TTATTAGTCTTCGCAACAGT+AGG | + | chr1.1:31358288-31358307 | None:intergenic | 35.0% |
!! | TTTGTGAAACTTTTTAGGCG+AGG | + | chr1.1:31357724-31357743 | None:intergenic | 35.0% |
!!! | AGGCTTGGCTTGATTTTTTT+GGG | + | chr1.1:31360774-31360793 | None:intergenic | 35.0% |
!!! | ATTTTGAAATCCCGACTTTC+AGG | - | chr1.1:31361375-31361394 | MS.gene037902:intron | 35.0% |
!!! | TCCAAATGATTGGCCTTTTA+AGG | - | chr1.1:31357149-31357168 | MS.gene037902:CDS | 35.0% |
AAATGCTAACTAGTTCCCCT+GGG | - | chr1.1:31359200-31359219 | MS.gene037902:intron | 40.0% | |
AAGAAGGTTGAGAAAGATCC+TGG | - | chr1.1:31357123-31357142 | MS.gene037902:CDS | 40.0% | |
AAGTCATAATCACCGTCCAT+AGG | + | chr1.1:31362537-31362556 | None:intergenic | 40.0% | |
ACAGATTGTGGCTACTGTTA+GGG | - | chr1.1:31361523-31361542 | MS.gene037902:intron | 40.0% | |
ACGAGGGTTTGTAGAACAAA+AGG | + | chr1.1:31359500-31359519 | None:intergenic | 40.0% | |
ACTTAACTGCTTTGTCATCC+TGG | + | chr1.1:31362299-31362318 | None:intergenic | 40.0% | |
AGAAGCCGTTTCAACTGAAT+TGG | + | chr1.1:31358244-31358263 | None:intergenic | 40.0% | |
AGAGTCTGATGTCATACTAG+AGG | - | chr1.1:31358463-31358482 | MS.gene037902:intron | 40.0% | |
ATATTCCCAGAAGGGAAAAG+GGG | + | chr1.1:31358619-31358638 | None:intergenic | 40.0% | |
ATTCCACAAAAAGCAAGCAG+TGG | + | chr1.1:31360715-31360734 | None:intergenic | 40.0% | |
CAAATAAGAACTAGGTGGTG+AGG | + | chr1.1:31360815-31360834 | None:intergenic | 40.0% | |
CAAGAATCGTTCTTCATGAC+TGG | - | chr1.1:31361588-31361607 | MS.gene037902:intron | 40.0% | |
CATGATCTCAGTTGAAGGAA+TGG | - | chr1.1:31360564-31360583 | MS.gene037902:intron | 40.0% | |
CTCAAGACATCAATCACTGT+TGG | - | chr1.1:31359971-31359990 | MS.gene037902:intron | 40.0% | |
CTTCCGATGGATGAAAAGAT+AGG | + | chr1.1:31361171-31361190 | None:intergenic | 40.0% | |
CTTGTGATTCACATGCTTCT+TGG | - | chr1.1:31359114-31359133 | MS.gene037902:intron | 40.0% | |
GAAAATGGAGGGTTATACAG+AGG | + | chr1.1:31360337-31360356 | None:intergenic | 40.0% | |
GAATTATGCAAGAAGCGACA+AGG | - | chr1.1:31358863-31358882 | MS.gene037902:intron | 40.0% | |
GAGAAGTTATATACAGCGGA+AGG | - | chr1.1:31362438-31362457 | MS.gene037902:CDS | 40.0% | |
GGATGACAAAGCAGTTAAGT+TGG | - | chr1.1:31362299-31362318 | MS.gene037902:intron | 40.0% | |
GTCAAAGCAAGAGATTCGTT+TGG | - | chr1.1:31360090-31360109 | MS.gene037902:intron | 40.0% | |
GTGAAGTTACAAGAATTGGG+AGG | + | chr1.1:31359886-31359905 | None:intergenic | 40.0% | |
TAACAGTAGCCACAATCTGT+AGG | + | chr1.1:31361523-31361542 | None:intergenic | 40.0% | |
TACAGATTGTGGCTACTGTT+AGG | - | chr1.1:31361522-31361541 | MS.gene037902:intron | 40.0% | |
TCATGCCCTTACTATATCGA+TGG | + | chr1.1:31360875-31360894 | None:intergenic | 40.0% | |
TCTGTTTGTATGGAGGGAAA+TGG | - | chr1.1:31362020-31362039 | MS.gene037902:intron | 40.0% | |
TGATGACTTCCTACAGATTG+TGG | - | chr1.1:31361511-31361530 | MS.gene037902:intron | 40.0% | |
TTAACACAACGAGTACCCAA+GGG | + | chr1.1:31358506-31358525 | None:intergenic | 40.0% | |
TTGGAGTTATCATCATCCAC+TGG | + | chr1.1:31358225-31358244 | None:intergenic | 40.0% | |
TTGTCCCTGTTTGGATAATG+AGG | - | chr1.1:31357542-31357561 | MS.gene037902:intron | 40.0% | |
TTTGTATGGAGGGAAATGGA+AGG | - | chr1.1:31362024-31362043 | MS.gene037902:intron | 40.0% | |
! | AATAGGTTACTGGTATTGGG+AGG | + | chr1.1:31360630-31360649 | None:intergenic | 40.0% |
! | ATAGGTTACTGGTATTGGGA+GGG | + | chr1.1:31360629-31360648 | None:intergenic | 40.0% |
! | CCAGAAAGGAGCATAAAAGA+TGG | + | chr1.1:31360510-31360529 | None:intergenic | 40.0% |
! | CCATCTTTTATGCTCCTTTC+TGG | - | chr1.1:31360507-31360526 | MS.gene037902:intron | 40.0% |
! | GACATCAATCACTGTTGGTT+TGG | - | chr1.1:31359976-31359995 | MS.gene037902:intron | 40.0% |
! | TCTTAGTGCTTTAGGCATGT+GGG | + | chr1.1:31361068-31361087 | None:intergenic | 40.0% |
! | TCTTGTTTCAGGCTCGTAAA+AGG | - | chr1.1:31358187-31358206 | MS.gene037902:intron | 40.0% |
! | TGCTACTTGAAATGGATGGT+TGG | - | chr1.1:31360301-31360320 | MS.gene037902:intron | 40.0% |
! | TTTACCGGGACAACAAGTTT+TGG | + | chr1.1:31357811-31357830 | None:intergenic | 40.0% |
!! | CTTTCCAAAACTTGTTGTCC+CGG | - | chr1.1:31357804-31357823 | MS.gene037902:CDS | 40.0% |
!! | TCAATCACTGTTGGTTTGGT+TGG | - | chr1.1:31359980-31359999 | MS.gene037902:intron | 40.0% |
!! | TGACACGCATCTATTTTGGA+TGG | - | chr1.1:31361997-31362016 | MS.gene037902:intron | 40.0% |
!!! | GAGGCTTGGCTTGATTTTTT+TGG | + | chr1.1:31360775-31360794 | None:intergenic | 40.0% |
!!! | GGCTTGGCTTGATTTTTTTG+GGG | + | chr1.1:31360773-31360792 | None:intergenic | 40.0% |
!!! | TGATTGGCCTTTTAAGGAAC+AGG | - | chr1.1:31357155-31357174 | MS.gene037902:CDS | 40.0% |
!!! | TTACCACTGCTTGCTTTTTG+TGG | - | chr1.1:31360709-31360728 | MS.gene037902:CDS | 40.0% |
AAGAGATATCAGCACCCTAG+CGG | + | chr1.1:31361465-31361484 | None:intergenic | 45.0% | |
AAGATGAGAGGGCAACTTGA+AGG | + | chr1.1:31361887-31361906 | None:intergenic | 45.0% | |
AATGCTAACTAGTTCCCCTG+GGG | - | chr1.1:31359201-31359220 | MS.gene037902:intron | 45.0% | |
AGAACGTGCTCTTGCTGAAT+TGG | - | chr1.1:31357203-31357222 | MS.gene037902:CDS | 45.0% | |
AGAGGATGTTAGCAAGGAGA+AGG | - | chr1.1:31362389-31362408 | MS.gene037902:CDS | 45.0% | |
AGCTCATCTGATCCTATGGA+CGG | - | chr1.1:31362522-31362541 | MS.gene037902:CDS | 45.0% | |
AGGAGATGACTTCAAGTACC+TGG | + | chr1.1:31360235-31360254 | None:intergenic | 45.0% | |
ATCAACCTCAACACCAGACA+TGG | + | chr1.1:31362658-31362677 | None:intergenic | 45.0% | |
ATCCAAACAGGGACAAATGC+AGG | + | chr1.1:31357538-31357557 | None:intergenic | 45.0% | |
CAACCAGGCACTTCATATCA+AGG | + | chr1.1:31360937-31360956 | None:intergenic | 45.0% | |
CAGATTGTGGCTACTGTTAG+GGG | - | chr1.1:31361524-31361543 | MS.gene037902:intron | 45.0% | |
CAGTAGGGAATTCTTCTCGA+AGG | + | chr1.1:31358719-31358738 | None:intergenic | 45.0% | |
CGCAACAGTAGGAACAGTTT+CGG | + | chr1.1:31358277-31358296 | None:intergenic | 45.0% | |
CTGATCCAAATCACTGGCAA+AGG | + | chr1.1:31358435-31358454 | None:intergenic | 45.0% | |
CTTCAAGTACCTGGGCTAAT+TGG | + | chr1.1:31360226-31360245 | None:intergenic | 45.0% | |
GAAAAAAGGGTGAGGAAAGC+AGG | - | chr1.1:31358530-31358549 | MS.gene037902:intron | 45.0% | |
GAAACTATCTTGGCCTCTGA+AGG | + | chr1.1:31361764-31361783 | None:intergenic | 45.0% | |
GAAATGCTAACTAGTTCCCC+TGG | - | chr1.1:31359199-31359218 | MS.gene037902:intron | 45.0% | |
GAACTAGGTGGTGAGGTTAA+AGG | + | chr1.1:31360808-31360827 | None:intergenic | 45.0% | |
GAAGGGAAAAGGGGAGAAAA+AGG | + | chr1.1:31358610-31358629 | None:intergenic | 45.0% | |
GAGAGTCTACTCAGAGATGT+AGG | - | chr1.1:31358065-31358084 | MS.gene037902:CDS | 45.0% | |
GGAGATGACTTCAAGTACCT+GGG | + | chr1.1:31360234-31360253 | None:intergenic | 45.0% | |
GGATGGTCTGTTTGTATGGA+GGG | - | chr1.1:31362014-31362033 | MS.gene037902:intron | 45.0% | |
GGCCCTATCTGAACTATCTA+TGG | + | chr1.1:31358414-31358433 | None:intergenic | 45.0% | |
GGTTAAAGGCAGCTAAATCG+AGG | + | chr1.1:31360794-31360813 | None:intergenic | 45.0% | |
GTTAACACAACGAGTACCCA+AGG | + | chr1.1:31358507-31358526 | None:intergenic | 45.0% | |
GTTTCAGGCTCGTAAAAGGA+AGG | - | chr1.1:31358191-31358210 | MS.gene037902:intron | 45.0% | |
TATGGAGGGAAATGGAAGGT+GGG | - | chr1.1:31362028-31362047 | MS.gene037902:intron | 45.0% | |
TCAACCTCAACACCAGACAT+GGG | + | chr1.1:31362657-31362676 | None:intergenic | 45.0% | |
TCCCAATAGAGCCTGAAAGT+CGG | + | chr1.1:31361389-31361408 | None:intergenic | 45.0% | |
TGATGAACAAGTCAACACCG+AGG | - | chr1.1:31362629-31362648 | MS.gene037902:intron | 45.0% | |
TGCACTTGAAAGCGACAGTA+GGG | + | chr1.1:31358734-31358753 | None:intergenic | 45.0% | |
TGGATGGTCTGTTTGTATGG+AGG | - | chr1.1:31362013-31362032 | MS.gene037902:intron | 45.0% | |
TTAGCTGATCCAATTAGCCC+AGG | - | chr1.1:31360214-31360233 | MS.gene037902:intron | 45.0% | |
TTCCTGCATTTGTCCCTGTT+TGG | - | chr1.1:31357533-31357552 | MS.gene037902:intron | 45.0% | |
! | ACTTCTCAACTGACTCTCGA+GGG | + | chr1.1:31358686-31358705 | None:intergenic | 45.0% |
! | AGACCTTGATATGAAGTGCC+TGG | - | chr1.1:31360931-31360950 | MS.gene037902:intron | 45.0% |
! | CTTAGTGCTTTAGGCATGTG+GGG | + | chr1.1:31361067-31361086 | None:intergenic | 45.0% |
! | CTTTGCCAGTGATTTGGATC+AGG | - | chr1.1:31358433-31358452 | MS.gene037902:intron | 45.0% |
! | GGCCAATCATTTGGAATACC+AGG | + | chr1.1:31357144-31357163 | None:intergenic | 45.0% |
! | GTCTTAGTGCTTTAGGCATG+TGG | + | chr1.1:31361069-31361088 | None:intergenic | 45.0% |
! | TTCTCTGCTCGCCTCAATTT+TGG | + | chr1.1:31362474-31362493 | None:intergenic | 45.0% |
! | TTTCTCCCCTTTTCCCTTCT+GGG | - | chr1.1:31358611-31358630 | MS.gene037902:intron | 45.0% |
! | TTTTCTCCCCTTTTCCCTTC+TGG | - | chr1.1:31358610-31358629 | MS.gene037902:intron | 45.0% |
!! | GCTCTAGAACATGACCAGAA+AGG | + | chr1.1:31360524-31360543 | None:intergenic | 45.0% |
!!! | TAGATTTTTTTTTTTTTTAA+TGG | - | chr1.1:31357411-31357430 | MS.gene037902:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTACTAT+GGG | - | chr1.1:31361104-31361123 | MS.gene037902:CDS | 5.0% |
!!! | TTTTTTTTTTTTTTTTACTA+TGG | - | chr1.1:31361103-31361122 | MS.gene037902:CDS | 5.0% |
AACACCAGACATGGGAACCT+CGG | + | chr1.1:31362649-31362668 | None:intergenic | 50.0% | |
AAGGACACGATGGATGCTGA+CGG | - | chr1.1:31362576-31362595 | MS.gene037902:intron | 50.0% | |
AAGGCAGCTAAATCGAGGCT+TGG | + | chr1.1:31360789-31360808 | None:intergenic | 50.0% | |
AGAGATATCAGCACCCTAGC+GGG | + | chr1.1:31361464-31361483 | None:intergenic | 50.0% | |
AGCCAGCTCATCTGATCCTA+TGG | - | chr1.1:31362518-31362537 | MS.gene037902:CDS | 50.0% | |
AGTCCAGCATGACAACACCA+GGG | + | chr1.1:31360141-31360160 | None:intergenic | 50.0% | |
ATGCCTCCAGTTAGGGATCA+AGG | - | chr1.1:31361734-31361753 | MS.gene037902:intron | 50.0% | |
CCCAATAGAGCCTGAAAGTC+GGG | + | chr1.1:31361388-31361407 | None:intergenic | 50.0% | |
CCCGACTTTCAGGCTCTATT+GGG | - | chr1.1:31361385-31361404 | MS.gene037902:intron | 50.0% | |
CTCGAGAGTCAGTTGAGAAG+TGG | - | chr1.1:31358685-31358704 | MS.gene037902:intron | 50.0% | |
CTGCACTTGAAAGCGACAGT+AGG | + | chr1.1:31358735-31358754 | None:intergenic | 50.0% | |
GGATCAAGGAGAACCTTCAG+AGG | - | chr1.1:31361748-31361767 | MS.gene037902:intron | 50.0% | |
GGTTCTCCTTGATCCCTAAC+TGG | + | chr1.1:31361743-31361762 | None:intergenic | 50.0% | |
GTATGGAGGGAAATGGAAGG+TGG | - | chr1.1:31362027-31362046 | MS.gene037902:intron | 50.0% | |
GTCCATAGGATCAGATGAGC+TGG | + | chr1.1:31362523-31362542 | None:intergenic | 50.0% | |
GTTAGGGGCAAGCTCAAGAA+GGG | - | chr1.1:31361539-31361558 | MS.gene037902:intron | 50.0% | |
TACTAGAGGTCCTTGATGCC+CGG | - | chr1.1:31358477-31358496 | MS.gene037902:intron | 50.0% | |
TAGGGCCTTTGCCAGTGATT+TGG | - | chr1.1:31358427-31358446 | MS.gene037902:intron | 50.0% | |
TATGCTAACCGGTGCCTCAT+GGG | + | chr1.1:31359358-31359377 | None:intergenic | 50.0% | |
TCAGGCTCGTAAAAGGAAGG+CGG | - | chr1.1:31358194-31358213 | MS.gene037902:intron | 50.0% | |
TCCCGACTTTCAGGCTCTAT+TGG | - | chr1.1:31361384-31361403 | MS.gene037902:intron | 50.0% | |
TCGATGTCAGTGCTAGTGCT+GGG | - | chr1.1:31360059-31360078 | MS.gene037902:intron | 50.0% | |
TCTCCTTGATCCCTAACTGG+AGG | + | chr1.1:31361740-31361759 | None:intergenic | 50.0% | |
TGTTAGGGGCAAGCTCAAGA+AGG | - | chr1.1:31361538-31361557 | MS.gene037902:intron | 50.0% | |
TTATGCTAACCGGTGCCTCA+TGG | + | chr1.1:31359359-31359378 | None:intergenic | 50.0% | |
TTGGTTGGACTGCCCAATGT+TGG | - | chr1.1:31359995-31360014 | MS.gene037902:intron | 50.0% | |
! | CACTTCTCAACTGACTCTCG+AGG | + | chr1.1:31358687-31358706 | None:intergenic | 50.0% |
! | GTTAAGTTGCTGGATTGCCC+TGG | - | chr1.1:31360121-31360140 | MS.gene037902:intron | 50.0% |
!! | TAGCACTGACATCGACAGCA+TGG | + | chr1.1:31360054-31360073 | None:intergenic | 50.0% |
AACACCGAGGTTCCCATGTC+TGG | - | chr1.1:31362642-31362661 | MS.gene037902:intron | 55.0% | |
AACGAGTACCCAAGGGATCC+CGG | + | chr1.1:31358499-31358518 | None:intergenic | 55.0% | |
ACTAGAGGTCCTTGATGCCC+GGG | - | chr1.1:31358478-31358497 | MS.gene037902:intron | 55.0% | |
AGGACACGATGGATGCTGAC+GGG | - | chr1.1:31362577-31362596 | MS.gene037902:intron | 55.0% | |
AGGCTCGTAAAAGGAAGGCG+GGG | - | chr1.1:31358196-31358215 | MS.gene037902:intron | 55.0% | |
ATGGATGCTGACGGGAGTGA+CGG | - | chr1.1:31362585-31362604 | MS.gene037902:intron | 55.0% | |
CAGGCTCGTAAAAGGAAGGC+GGG | - | chr1.1:31358195-31358214 | MS.gene037902:intron | 55.0% | |
GAGTCCAGCATGACAACACC+AGG | + | chr1.1:31360142-31360161 | None:intergenic | 55.0% | |
GTCGATGTCAGTGCTAGTGC+TGG | - | chr1.1:31360058-31360077 | MS.gene037902:intron | 55.0% | |
TCTCAAGCTCTGTCCCGCTA+GGG | - | chr1.1:31361448-31361467 | MS.gene037902:intron | 55.0% | |
TTCTCAAGCTCTGTCCCGCT+AGG | - | chr1.1:31361447-31361466 | MS.gene037902:intron | 55.0% | |
! | GACGGTGGTGACGACAATGA+TGG | - | chr1.1:31362603-31362622 | MS.gene037902:intron | 55.0% |
! | GGTTCCCATGTCTGGTGTTG+AGG | - | chr1.1:31362650-31362669 | MS.gene037902:intron | 55.0% |
!! | TTGCCCTGGTGTTGTCATGC+TGG | - | chr1.1:31360135-31360154 | MS.gene037902:intron | 55.0% |
AACTAGTTCCCCTGGGGCAC+TGG | - | chr1.1:31359207-31359226 | MS.gene037902:intron | 60.0% | |
ACGAGTACCCAAGGGATCCC+GGG | + | chr1.1:31358498-31358517 | None:intergenic | 60.0% | |
ACTCCTTAACCCAGTGCCCC+AGG | + | chr1.1:31359220-31359239 | None:intergenic | 60.0% | |
AGGGGCAAGCTCAAGAAGGG+TGG | - | chr1.1:31361542-31361561 | MS.gene037902:intron | 60.0% | |
CTCCTTAACCCAGTGCCCCA+GGG | + | chr1.1:31359219-31359238 | None:intergenic | 60.0% | |
CTCCTTAACCGGTGCCCATG+AGG | - | chr1.1:31359341-31359360 | MS.gene037902:intron | 60.0% | |
CTTGATGCCCGGGATCCCTT+GGG | - | chr1.1:31358488-31358507 | MS.gene037902:intron | 60.0% | |
TCCTTAACCCAGTGCCCCAG+GGG | + | chr1.1:31359218-31359237 | None:intergenic | 60.0% | |
! | ACTAGTTCCCCTGGGGCACT+GGG | - | chr1.1:31359208-31359227 | MS.gene037902:intron | 60.0% |
! | GTGCTAGTGCTGGGTCGACA+AGG | - | chr1.1:31360068-31360087 | MS.gene037902:intron | 60.0% |
!! | TGCCTCATGGGCACCGGTTA+AGG | + | chr1.1:31359346-31359365 | None:intergenic | 60.0% |
AACCGGTGCCCATGAGGCAC+CGG | - | chr1.1:31359347-31359366 | MS.gene037902:CDS | 65.0% | |
AACCGGTGCCTCATGGGCAC+CGG | + | chr1.1:31359352-31359371 | None:intergenic | 65.0% | |
AAGGAAGGCGGGGTTGCCAG+TGG | - | chr1.1:31358206-31358225 | MS.gene037902:intron | 65.0% | |
CCAAGGGATCCCGGGCATCA+AGG | + | chr1.1:31358490-31358509 | None:intergenic | 65.0% | |
CCTTGATGCCCGGGATCCCT+TGG | - | chr1.1:31358487-31358506 | MS.gene037902:intron | 65.0% | |
GATGCTGACGGGAGTGACGG+TGG | - | chr1.1:31362588-31362607 | MS.gene037902:intron | 65.0% | |
!! | TCCCCTGGGGCACTGGGTTA+AGG | - | chr1.1:31359214-31359233 | MS.gene037902:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 31356897 | 31362683 | 31356897 | ID=MS.gene037902 |
chr1.1 | mRNA | 31356897 | 31362683 | 31356897 | ID=MS.gene037902.t1;Parent=MS.gene037902 |
chr1.1 | exon | 31362665 | 31362683 | 31362665 | ID=MS.gene037902.t1.exon1;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31362665 | 31362683 | 31362665 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
chr1.1 | exon | 31362326 | 31362570 | 31362326 | ID=MS.gene037902.t1.exon2;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31362326 | 31362570 | 31362326 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
chr1.1 | exon | 31361271 | 31361382 | 31361271 | ID=MS.gene037902.t1.exon3;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31361271 | 31361382 | 31361271 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
chr1.1 | exon | 31360990 | 31361163 | 31360990 | ID=MS.gene037902.t1.exon4;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31360990 | 31361163 | 31360990 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
chr1.1 | exon | 31360696 | 31360904 | 31360696 | ID=MS.gene037902.t1.exon5;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31360696 | 31360904 | 31360696 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
chr1.1 | exon | 31359345 | 31359609 | 31359345 | ID=MS.gene037902.t1.exon6;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31359345 | 31359609 | 31359345 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
chr1.1 | exon | 31357963 | 31358142 | 31357963 | ID=MS.gene037902.t1.exon7;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31357963 | 31358142 | 31357963 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
chr1.1 | exon | 31357655 | 31357866 | 31357655 | ID=MS.gene037902.t1.exon8;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31357655 | 31357866 | 31357655 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
chr1.1 | exon | 31356897 | 31357280 | 31356897 | ID=MS.gene037902.t1.exon9;Parent=MS.gene037902.t1 |
chr1.1 | CDS | 31356897 | 31357280 | 31356897 | ID=cds.MS.gene037902.t1;Parent=MS.gene037902.t1 |
Gene Sequence |
Protein sequence |