Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53720.t1 | XP_013467257.1 | 91.3 | 599 | 52 | 0 | 1 | 599 | 1 | 599 | 3.00E-250 | 874.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53720.t1 | Q9M8Z5 | 64.1 | 566 | 189 | 5 | 1 | 562 | 1 | 556 | 7.8e-162 | 572.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53720.t1 | A0A072VI64 | 91.3 | 599 | 52 | 0 | 1 | 599 | 1 | 599 | 2.2e-250 | 874.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53720.t1 | MTR_1g048030 | 95.009 | 561 | 28 | 0 | 39 | 599 | 39 | 599 | 0.0 | 1019 |
MS.gene53720.t1 | MTR_2g079510 | 33.924 | 395 | 230 | 6 | 125 | 513 | 197 | 566 | 3.58e-59 | 207 |
MS.gene53720.t1 | MTR_4g081850 | 38.676 | 287 | 153 | 3 | 125 | 411 | 189 | 452 | 6.50e-58 | 204 |
MS.gene53720.t1 | MTR_4g050490 | 27.707 | 314 | 187 | 5 | 136 | 411 | 162 | 473 | 7.87e-28 | 118 |
MS.gene53720.t1 | MTR_7g056733 | 84.000 | 50 | 8 | 0 | 39 | 88 | 39 | 88 | 9.55e-21 | 87.4 |
MS.gene53720.t1 | MTR_7g094890 | 29.268 | 205 | 123 | 5 | 144 | 346 | 119 | 303 | 8.83e-14 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53720.t1 | AT3G07050 | 64.784 | 602 | 181 | 8 | 1 | 595 | 1 | 578 | 0.0 | 659 |
MS.gene53720.t1 | AT1G52980 | 38.235 | 306 | 166 | 3 | 125 | 430 | 199 | 481 | 8.62e-59 | 206 |
MS.gene53720.t1 | AT2G27200 | 28.803 | 309 | 187 | 5 | 136 | 411 | 161 | 469 | 3.70e-31 | 128 |
MS.gene53720.t1 | AT1G08410 | 27.900 | 319 | 193 | 5 | 136 | 417 | 161 | 479 | 8.89e-31 | 127 |
MS.gene53720.t1 | AT4G02790 | 29.720 | 286 | 153 | 10 | 144 | 412 | 118 | 372 | 1.83e-15 | 79.0 |
Find 132 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTGCTCGCCTCAATTT+TGG | 0.124286 | 1.3:+29863671 | None:intergenic |
TTCAATTCCTGTTCCTTAAA+AGG | 0.143573 | 1.3:+29868995 | None:intergenic |
AAAGCAATACATGACGTTTA+TGG | 0.143814 | 1.3:+29867586 | None:intergenic |
AATGGTGAAACTTCATTTAT+TGG | 0.147898 | 1.3:-29864315 | MS.gene53720:CDS |
CTAACTCAACAGTAGGTTTA+AGG | 0.177591 | 1.3:+29864289 | None:intergenic |
TATGCTCTTTCACTTTCTTT+AGG | 0.222156 | 1.3:+29869104 | None:intergenic |
CTTCAAGTACCTGGGCTAAT+TGG | 0.236805 | 1.3:+29865926 | None:intergenic |
CAAAGTTGATTACTTCAAAA+AGG | 0.273492 | 1.3:-29863585 | MS.gene53720:CDS |
ATGGTGAAACTTCATTTATT+GGG | 0.277748 | 1.3:-29864314 | MS.gene53720:CDS |
TCTTGTTTCAGGCTCGTAAA+AGG | 0.281841 | 1.3:-29867955 | MS.gene53720:intron |
TACAGATTGTGGCTACTGTT+AGG | 0.291683 | 1.3:-29864628 | MS.gene53720:CDS |
TCTTGTTCTGCCAACTTAAC+TGG | 0.293466 | 1.3:+29863833 | None:intergenic |
GGTTCTCCTTGATCCCTAAC+TGG | 0.296301 | 1.3:+29864396 | None:intergenic |
AGAAGCCGTTTCAACTGAAT+TGG | 0.312062 | 1.3:+29867901 | None:intergenic |
TAGGGCCTTTGCCAGTGATT+TGG | 0.321863 | 1.3:-29867715 | MS.gene53720:CDS |
AAGCAATACATGACGTTTAT+GGG | 0.328299 | 1.3:+29867587 | None:intergenic |
AGAACGTGCTCTTGCTGAAT+TGG | 0.338023 | 1.3:-29868954 | MS.gene53720:CDS |
TCCTTAAAAGGCCAATCATT+TGG | 0.343965 | 1.3:+29869007 | None:intergenic |
GACATCAATCACTGTTGGTT+TGG | 0.362256 | 1.3:-29866173 | MS.gene53720:CDS |
CTTTGATGAGACAATGTTAG+AGG | 0.363951 | 1.3:-29864232 | MS.gene53720:intron |
CAATGATGAGGATGAATCTA+TGG | 0.371503 | 1.3:-29863786 | MS.gene53720:CDS |
AGAAAACTCTGAAACTATCT+TGG | 0.371936 | 1.3:+29864365 | None:intergenic |
TTACAGAGAGTAAGAGTAAG+AGG | 0.372287 | 1.3:-29869153 | MS.gene53720:intron |
GTCGATGTCAGTGCTAGTGC+TGG | 0.375077 | 1.3:-29866091 | MS.gene53720:CDS |
GTTCTTCATGACTGGAATAT+AGG | 0.376417 | 1.3:-29864554 | MS.gene53720:intron |
CCTTGATGCCCGGGATCCCT+TGG | 0.391586 | 1.3:-29867655 | MS.gene53720:CDS |
TTGCCCTGGTGTTGTCATGC+TGG | 0.392424 | 1.3:-29866014 | MS.gene53720:CDS |
ACAGATTGTGGCTACTGTTA+GGG | 0.404092 | 1.3:-29864627 | MS.gene53720:CDS |
TCAATCACTGTTGGTTTGGT+TGG | 0.404100 | 1.3:-29866169 | MS.gene53720:CDS |
TTTCCATAGATAGTTCAGAT+AGG | 0.404505 | 1.3:-29867734 | MS.gene53720:intron |
AGCACCGAGGTTCCCATGTC+TGG | 0.418803 | 1.3:-29863500 | MS.gene53720:CDS |
CGCAACAGTAGGAACACTTT+CGG | 0.421264 | 1.3:+29867868 | None:intergenic |
TACTAGAGGTCCTTGATGCC+CGG | 0.453164 | 1.3:-29867665 | MS.gene53720:CDS |
CTTTGCCAGTGATTTGGATC+GGG | 0.454308 | 1.3:-29867709 | MS.gene53720:CDS |
AGAAAGAAGCTCGTAGAGAA+AGG | 0.455273 | 1.3:-29868925 | MS.gene53720:CDS |
AACGAGTACCCAAGGGATCC+CGG | 0.456156 | 1.3:+29867646 | None:intergenic |
CCTTTGCCAGTGATTTGGAT+CGG | 0.461178 | 1.3:-29867710 | MS.gene53720:CDS |
GTCAAAGCAAGAGATTCGTT+TGG | 0.461640 | 1.3:-29866059 | MS.gene53720:CDS |
CTTGATGCCCGGGATCCCTT+GGG | 0.462440 | 1.3:-29867654 | MS.gene53720:CDS |
ATCCTGGTATTCCAAATGAT+TGG | 0.467524 | 1.3:-29869018 | MS.gene53720:CDS |
CAAGAATCGTTCTTCATGAC+TGG | 0.469526 | 1.3:-29864562 | MS.gene53720:CDS |
GGCCAATCATTTGGAATACC+AGG | 0.469715 | 1.3:+29869016 | None:intergenic |
ACTGTTGCGAAGACTAATAA+AGG | 0.470225 | 1.3:-29867854 | MS.gene53720:intron |
TCATTGTCATCAACATTCTC+AGG | 0.473233 | 1.3:+29863803 | None:intergenic |
TCAATTAAGTGGTAAGAAGA+AGG | 0.475631 | 1.3:-29869050 | MS.gene53720:CDS |
TTCCATAGATAGTTCAGATA+GGG | 0.481540 | 1.3:-29867733 | MS.gene53720:intron |
CAGGCTCGTAAAAGGAAGGC+GGG | 0.492005 | 1.3:-29867947 | MS.gene53720:CDS |
GTTCTCCTTGATCCCTAACT+GGG | 0.492076 | 1.3:+29864397 | None:intergenic |
AGACTACTCTTGCCAACATT+GGG | 0.494125 | 1.3:+29866142 | None:intergenic |
TCATCAACTGAATCAAAACT+TGG | 0.498766 | 1.3:+29864656 | None:intergenic |
AAGACTACTCTTGCCAACAT+TGG | 0.502511 | 1.3:+29866141 | None:intergenic |
TAACTCCAATTCAGTTGAAA+CGG | 0.507020 | 1.3:-29867906 | MS.gene53720:CDS |
ATCAACCTCAACACCAGACA+TGG | 0.513629 | 1.3:+29863487 | None:intergenic |
GAAAGAAGCTCGTAGAGAAA+GGG | 0.515017 | 1.3:-29868924 | MS.gene53720:intron |
AAGAAGGTTGAGAAAGATCC+TGG | 0.515836 | 1.3:-29869034 | MS.gene53720:CDS |
ATCCATGGGATCAGATGAGC+TGG | 0.517172 | 1.3:+29863622 | None:intergenic |
CCAAGGGATCCCGGGCATCA+AGG | 0.518140 | 1.3:+29867655 | None:intergenic |
GGATGACAAACCAGTTAAGT+TGG | 0.518277 | 1.3:-29863843 | MS.gene53720:CDS |
GAAGTCATAATCACCATCCA+TGG | 0.531299 | 1.3:+29863607 | None:intergenic |
AGAGATATCAGCACCCTAGC+GGG | 0.534816 | 1.3:+29864689 | None:intergenic |
TTCTCAAGCTCTGTCCCGCT+AGG | 0.535798 | 1.3:-29864703 | MS.gene53720:CDS |
TCAAAGATGAGAGGGCAACT+TGG | 0.542895 | 1.3:+29864249 | None:intergenic |
AGATGATGTTAGCAAGGAGA+AGG | 0.543096 | 1.3:-29863753 | MS.gene53720:CDS |
AGCCAGCTCATCTGATCCCA+TGG | 0.543549 | 1.3:-29863624 | MS.gene53720:CDS |
ACTAGAGGTCCTTGATGCCC+GGG | 0.544113 | 1.3:-29867664 | MS.gene53720:CDS |
CTCAAGACATCAATCACTGT+TGG | 0.544568 | 1.3:-29866178 | MS.gene53720:CDS |
GAAACTATCTTGGCCTCTGA+AGG | 0.545238 | 1.3:+29864375 | None:intergenic |
TTGGTTGGACTGCCCAATGT+TGG | 0.551515 | 1.3:-29866154 | MS.gene53720:CDS |
TGTTAGGGGCAAGCTCAAGA+AGG | 0.553084 | 1.3:-29864612 | MS.gene53720:CDS |
AAGATGAGAGGGCAACTTGG+TGG | 0.554517 | 1.3:+29864252 | None:intergenic |
TGATGACTTCCTACAGATTG+TGG | 0.555283 | 1.3:-29864639 | MS.gene53720:CDS |
TGATAAAGATGATGTTAGCA+AGG | 0.557771 | 1.3:-29863759 | MS.gene53720:CDS |
GTTAAGTTGCTGGATTGCCC+TGG | 0.568716 | 1.3:-29866028 | MS.gene53720:CDS |
GGTTCCCATGTCTGGTGTTG+AGG | 0.568722 | 1.3:-29863492 | MS.gene53720:CDS |
CTCGAGAGTCGGTTGAGAAG+TGG | 0.568779 | 1.3:-29867457 | MS.gene53720:CDS |
TGCACTTGAAAGCGACAGTA+GGG | 0.569257 | 1.3:+29867411 | None:intergenic |
ACGAGTACCCAAGGGATCCC+GGG | 0.570844 | 1.3:+29867647 | None:intergenic |
CTGCACTTGAAAGCGACAGT+AGG | 0.571229 | 1.3:+29867410 | None:intergenic |
ACATGATCTAACTCAACAGT+AGG | 0.573759 | 1.3:+29864282 | None:intergenic |
TCGATGTCAGTGCTAGTGCT+GGG | 0.574430 | 1.3:-29866090 | MS.gene53720:CDS |
TTGCAATTAAGTGATTGTCT+CGG | 0.574961 | 1.3:-29867329 | MS.gene53720:CDS |
CCGATCCAAATCACTGGCAA+AGG | 0.576008 | 1.3:+29867710 | None:intergenic |
TTATTAGTCTTCGCAACAGT+AGG | 0.576810 | 1.3:+29867857 | None:intergenic |
GAGTCCAGCATGACAACACC+AGG | 0.578166 | 1.3:+29866010 | None:intergenic |
AAGGAAGGCGGGGTTGCCAG+TGG | 0.578828 | 1.3:-29867936 | MS.gene53720:CDS |
TAAAGAGTTTAACATTGATG+AGG | 0.580829 | 1.3:-29864343 | MS.gene53720:CDS |
GTGCTAGTGCTGGGTCGACA+AGG | 0.591514 | 1.3:-29866081 | MS.gene53720:CDS |
AGATCTTGTCCCTCGAGAGT+CGG | 0.593701 | 1.3:-29867468 | MS.gene53720:CDS |
GTTTCAGGCTCGTAAAAGGA+AGG | 0.594629 | 1.3:-29867951 | MS.gene53720:intron |
TCTCAAGCTCTGTCCCGCTA+GGG | 0.595120 | 1.3:-29864702 | MS.gene53720:CDS |
AACACCAGACATGGGAACCT+CGG | 0.595303 | 1.3:+29863496 | None:intergenic |
CACTTCTCAACCGACTCTCG+AGG | 0.596471 | 1.3:+29867458 | None:intergenic |
GTTAACACAACGAGTACCCA+AGG | 0.598523 | 1.3:+29867638 | None:intergenic |
AACATTGATGAGGTCTACAA+TGG | 0.602817 | 1.3:-29864333 | MS.gene53720:CDS |
TTGTCTCATCAAAGATGAGA+GGG | 0.604223 | 1.3:+29864241 | None:intergenic |
CAGATTGTGGCTACTGTTAG+GGG | 0.604493 | 1.3:-29864626 | MS.gene53720:CDS |
AATAACCCGATCCAAATCAC+TGG | 0.604541 | 1.3:+29867704 | None:intergenic |
AGCTCATCTGATCCCATGGA+TGG | 0.607612 | 1.3:-29863620 | MS.gene53720:CDS |
TACAGAGAGTAAGAGTAAGA+GGG | 0.609076 | 1.3:-29869152 | MS.gene53720:intron |
GAGAAGTTATATACAGCGGA+GGG | 0.610057 | 1.3:-29863704 | MS.gene53720:CDS |
TTGGAGTTATCATCATCCAC+TGG | 0.612027 | 1.3:+29867920 | None:intergenic |
TTAGCTGATCCAATTAGCCC+AGG | 0.614684 | 1.3:-29865935 | MS.gene53720:intron |
TGAGAAGTTATATACAGCGG+AGG | 0.615635 | 1.3:-29863705 | MS.gene53720:CDS |
GTATACTTAATCCAAAATTG+AGG | 0.617540 | 1.3:-29863682 | MS.gene53720:CDS |
AAGTCATAATCACCATCCAT+GGG | 0.620040 | 1.3:+29863608 | None:intergenic |
TAACAGTAGCCACAATCTGT+AGG | 0.620654 | 1.3:+29864630 | None:intergenic |
GTTAGGGGCAAGCTCAAGAA+GGG | 0.621289 | 1.3:-29864611 | MS.gene53720:CDS |
AAGTTGGCAGAACAAGATGA+AGG | 0.622695 | 1.3:-29863827 | MS.gene53720:CDS |
ATTGTCTCATCAAAGATGAG+AGG | 0.635020 | 1.3:+29864240 | None:intergenic |
TCTCCTTGATCCCTAACTGG+GGG | 0.637476 | 1.3:+29864399 | None:intergenic |
TAGCACTGACATCGACAGCA+TGG | 0.638654 | 1.3:+29866098 | None:intergenic |
GATGCTGACGCGAGTGACGG+TGG | 0.640629 | 1.3:-29863554 | MS.gene53720:CDS |
ATGCTGACGCGAGTGACGGT+GGG | 0.645886 | 1.3:-29863553 | MS.gene53720:CDS |
CAGTAGGGAATTCTTCTCGA+AGG | 0.646359 | 1.3:+29867426 | None:intergenic |
AGGGGCAAGCTCAAGAAGGG+TGG | 0.649554 | 1.3:-29864608 | MS.gene53720:CDS |
TCAGGCTCGTAAAAGGAAGG+CGG | 0.649927 | 1.3:-29867948 | MS.gene53720:intron |
ACTTCTCAACCGACTCTCGA+GGG | 0.655724 | 1.3:+29867459 | None:intergenic |
GAATTATGCAAGAAGCGACA+AGG | 0.656552 | 1.3:-29867279 | MS.gene53720:intron |
TCAACCTCAACACCAGACAT+GGG | 0.660182 | 1.3:+29863488 | None:intergenic |
GGATCAAGGAGAACCTTCAG+AGG | 0.661640 | 1.3:-29864388 | MS.gene53720:CDS |
AGAGTCTGATGTCATACTAG+AGG | 0.662679 | 1.3:-29867679 | MS.gene53720:CDS |
TTCTCCTTGATCCCTAACTG+GGG | 0.665827 | 1.3:+29864398 | None:intergenic |
ATGGATGCTGACGCGAGTGA+CGG | 0.667583 | 1.3:-29863557 | MS.gene53720:CDS |
TGCTGACGCGAGTGACGGTG+GGG | 0.682055 | 1.3:-29863552 | MS.gene53720:CDS |
GACGGTGGGGACGACAATGA+TGG | 0.683473 | 1.3:-29863539 | MS.gene53720:CDS |
AGGCTCGTAAAAGGAAGGCG+GGG | 0.684944 | 1.3:-29867946 | MS.gene53720:CDS |
TTAACACAACGAGTACCCAA+GGG | 0.685445 | 1.3:+29867639 | None:intergenic |
AAATGAGAAGTTATATACAG+CGG | 0.699343 | 1.3:-29863708 | MS.gene53720:CDS |
GAATGTTGATGACAATGATG+AGG | 0.708173 | 1.3:-29863798 | MS.gene53720:CDS |
AAGAGATATCAGCACCCTAG+CGG | 0.715395 | 1.3:+29864688 | None:intergenic |
AGTCCAGCATGACAACACCA+GGG | 0.773850 | 1.3:+29866011 | None:intergenic |
TGATGAACAAGTCAGCACCG+AGG | 0.809236 | 1.3:-29863513 | MS.gene53720:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACCTTATTATTATTATTA+GGG | - | chr1.3:29865771-29865790 | MS.gene53720:intron | 10.0% |
!! | AAATAAGAGAATTAATTAAT+GGG | + | chr1.3:29866848-29866867 | None:intergenic | 10.0% |
!! | TAAATAAGAGAATTAATTAA+TGG | + | chr1.3:29866849-29866868 | None:intergenic | 10.0% |
!!! | ATTAATTAATTCTCTTATTT+AGG | - | chr1.3:29866848-29866867 | MS.gene53720:intron | 10.0% |
!!! | ATTTCAAAATTAAGATTTTA+AGG | + | chr1.3:29867951-29867970 | None:intergenic | 10.0% |
!!! | TTTAGTTTAAACTTTAAAAT+TGG | - | chr1.3:29867273-29867292 | MS.gene53720:intron | 10.0% |
!!! | TTTGATTTAATTTTTATGAT+AGG | - | chr1.3:29868672-29868691 | MS.gene53720:intron | 10.0% |
!!! | TTTTTATGTTTTTTTTTGAA+TGG | - | chr1.3:29863841-29863860 | MS.gene53720:CDS | 10.0% |
!! | AACATAAAAAATAAAAAGAG+AGG | + | chr1.3:29865518-29865537 | None:intergenic | 15.0% |
!! | AATAAGAGAATTAATTAATG+GGG | + | chr1.3:29866847-29866866 | None:intergenic | 15.0% |
!! | ACATAAAAAATAAAAAGAGA+GGG | + | chr1.3:29865517-29865536 | None:intergenic | 15.0% |
!! | AGATTAAAAATTACAATGAA+AGG | + | chr1.3:29868784-29868803 | None:intergenic | 15.0% |
!! | ATTTATTGTTTGAAAATTGA+TGG | - | chr1.3:29863889-29863908 | MS.gene53720:intron | 15.0% |
!! | GAAACCTTATTATTATTATT+AGG | - | chr1.3:29865770-29865789 | MS.gene53720:intron | 15.0% |
!! | GATTAATTTACTAAAACTAT+TGG | - | chr1.3:29864559-29864578 | MS.gene53720:CDS | 15.0% |
!! | TTTATTGTTTGAAAATTGAT+GGG | - | chr1.3:29863890-29863909 | MS.gene53720:intron | 15.0% |
!! | TTTCCCTAATAATAATAATA+AGG | + | chr1.3:29865777-29865796 | None:intergenic | 15.0% |
!!! | AAAAATTAAATTTTGTGAGA+TGG | - | chr1.3:29863924-29863943 | MS.gene53720:intron | 15.0% |
!!! | AAAATTAAATTTTGTGAGAT+GGG | - | chr1.3:29863925-29863944 | MS.gene53720:intron | 15.0% |
!!! | GCAATTTTAATTAAATTTTG+TGG | - | chr1.3:29867064-29867083 | MS.gene53720:intron | 15.0% |
!!! | TAATACTGATAATTGTTTTT+AGG | - | chr1.3:29867024-29867043 | MS.gene53720:intron | 15.0% |
!! | AAATTGAAAAAGTGATGAAA+GGG | + | chr1.3:29863513-29863532 | None:intergenic | 20.0% |
!! | ACTTCTAGTATTACAATTTA+TGG | - | chr1.3:29866491-29866510 | MS.gene53720:intron | 20.0% |
!! | ATAAAGTTGTAAACAACTTA+TGG | - | chr1.3:29864246-29864265 | MS.gene53720:CDS | 20.0% |
!! | ATAAGAGAATTAATTAATGG+GGG | + | chr1.3:29866846-29866865 | None:intergenic | 20.0% |
!! | ATAATCACTAAAATGTAGAA+TGG | + | chr1.3:29866443-29866462 | None:intergenic | 20.0% |
!! | ATAATTTCTGCATAAGAAAA+TGG | + | chr1.3:29866940-29866959 | None:intergenic | 20.0% |
!! | CCTTAGAAAATAAAAACTTA+TGG | - | chr1.3:29864278-29864297 | MS.gene53720:CDS | 20.0% |
!! | TAATTACTAAAGAGAACAAT+AGG | + | chr1.3:29867722-29867741 | None:intergenic | 20.0% |
!! | TACAACAAATTTCTTACTTT+CGG | + | chr1.3:29868279-29868298 | None:intergenic | 20.0% |
!! | TCAAATCAAATCAAATCAAA+AGG | + | chr1.3:29863562-29863581 | None:intergenic | 20.0% |
!! | TTGTGTTAACATAGAAAAAA+GGG | - | chr1.3:29865111-29865130 | MS.gene53720:intron | 20.0% |
!! | TTGTTTGTATAATTAAAGTG+AGG | - | chr1.3:29865623-29865642 | MS.gene53720:intron | 20.0% |
!!! | ATTTTGTACTTTTTCTTCAA+TGG | + | chr1.3:29863612-29863631 | None:intergenic | 20.0% |
!!! | CAAAATTGTAGGATTTTAAT+GGG | - | chr1.3:29868728-29868747 | MS.gene53720:intron | 20.0% |
!!! | CCATAAGTTTTTATTTTCTA+AGG | + | chr1.3:29864281-29864300 | None:intergenic | 20.0% |
!!! | CTTCTTTTTTTTTTTACTGT+GGG | - | chr1.3:29867690-29867709 | MS.gene53720:CDS | 20.0% |
!!! | CTTGAGATTAAAAGTTTTAT+CGG | + | chr1.3:29864423-29864442 | None:intergenic | 20.0% |
!!! | GTATTGCTTTTGAATAAAAT+TGG | - | chr1.3:29865163-29865182 | MS.gene53720:intron | 20.0% |
!!! | TAAAAGTACAGATAAAAACT+AGG | + | chr1.3:29867567-29867586 | None:intergenic | 20.0% |
!!! | TAGTTGAAGTATATTTTATG+AGG | - | chr1.3:29864079-29864098 | MS.gene53720:intron | 20.0% |
!!! | TATTTTATGAGGATTAGATT+TGG | - | chr1.3:29864090-29864109 | MS.gene53720:intron | 20.0% |
!!! | TCTTCTTTTTTTTTTTACTG+TGG | - | chr1.3:29867689-29867708 | MS.gene53720:CDS | 20.0% |
! | AAAACATGTATAGAATCTCA+AGG | + | chr1.3:29867188-29867207 | None:intergenic | 25.0% |
! | AAATGAGAAGTTATATACAG+CGG | - | chr1.3:29869028-29869047 | MS.gene53720:CDS | 25.0% |
! | AAATTGACACATATCTACTT+TGG | - | chr1.3:29868589-29868608 | MS.gene53720:intron | 25.0% |
! | AATGGTGAAACTTCATTTAT+TGG | - | chr1.3:29868421-29868440 | MS.gene53720:intron | 25.0% |
! | ACTCAAAAGGTAAAGATAAT+AGG | + | chr1.3:29867235-29867254 | None:intergenic | 25.0% |
! | AGACAAAGCCAAAATAATTA+CGG | + | chr1.3:29866532-29866551 | None:intergenic | 25.0% |
! | AGAGAAGAAGAAAAAGAAAA+AGG | - | chr1.3:29869082-29869101 | MS.gene53720:CDS | 25.0% |
! | AGATAATAGGTTACTAGTAT+TGG | + | chr1.3:29867222-29867241 | None:intergenic | 25.0% |
! | ATAATAAGAGTTATGCTAAC+CGG | + | chr1.3:29865963-29865982 | None:intergenic | 25.0% |
! | ATATCTTGTAAAATTGACGA+GGG | + | chr1.3:29866103-29866122 | None:intergenic | 25.0% |
! | ATGAAAAAAATATTCCCAGA+AGG | + | chr1.3:29865222-29865241 | None:intergenic | 25.0% |
! | ATGGTGAAACTTCATTTATT+GGG | - | chr1.3:29868422-29868441 | MS.gene53720:intron | 25.0% |
! | CAATATATTTAGCACTCAAA+AGG | + | chr1.3:29867248-29867267 | None:intergenic | 25.0% |
! | GAAATTGAAAAAGTGATGAA+AGG | + | chr1.3:29863514-29863533 | None:intergenic | 25.0% |
! | GATAATAGGTTACTAGTATT+GGG | + | chr1.3:29867221-29867240 | None:intergenic | 25.0% |
! | GGTCTTTATTCTTTAATCAA+CGG | + | chr1.3:29867504-29867523 | None:intergenic | 25.0% |
! | GTATACTTAATCCAAAATTG+AGG | - | chr1.3:29869054-29869073 | MS.gene53720:CDS | 25.0% |
! | GTTGTGTTAACATAGAAAAA+AGG | - | chr1.3:29865110-29865129 | MS.gene53720:intron | 25.0% |
! | TAAAGAGTTTAACATTGATG+AGG | - | chr1.3:29868393-29868412 | MS.gene53720:intron | 25.0% |
! | TATATCTTGTAAAATTGACG+AGG | + | chr1.3:29866104-29866123 | None:intergenic | 25.0% |
! | TCAAATCAAATCAAAAGGAT+TGG | + | chr1.3:29863557-29863576 | None:intergenic | 25.0% |
! | TCATAAATCAAATTTCAACC+AGG | + | chr1.3:29867540-29867559 | None:intergenic | 25.0% |
! | TGAAAAAAATATTCCCAGAA+GGG | + | chr1.3:29865221-29865240 | None:intergenic | 25.0% |
! | TGCAAGTGTTCTTATAAATA+TGG | - | chr1.3:29865555-29865574 | MS.gene53720:intron | 25.0% |
! | TGCATAAAGAAACAAACAAA+TGG | + | chr1.3:29866272-29866291 | None:intergenic | 25.0% |
!! | CAAAGTTGATTACTTCAAAA+AGG | - | chr1.3:29869151-29869170 | MS.gene53720:intron | 25.0% |
!! | CCAAAATTGTAGGATTTTAA+TGG | - | chr1.3:29868727-29868746 | MS.gene53720:intron | 25.0% |
!! | CCATTAAAATCCTACAATTT+TGG | + | chr1.3:29868730-29868749 | None:intergenic | 25.0% |
!! | CGATAAAACTTTTAATCTCA+AGG | - | chr1.3:29864421-29864440 | MS.gene53720:CDS | 25.0% |
!! | CTATTTTGCCGTAATTATTT+TGG | - | chr1.3:29866521-29866540 | MS.gene53720:intron | 25.0% |
!! | GGATGTTATCAATACTATTT+TGG | - | chr1.3:29865729-29865748 | MS.gene53720:intron | 25.0% |
!! | TAAAATCCTACAATTTTGGA+GGG | + | chr1.3:29868726-29868745 | None:intergenic | 25.0% |
!! | TCTTATTTAGGTCTTCATAT+TGG | - | chr1.3:29866860-29866879 | MS.gene53720:intron | 25.0% |
!! | TTAAAATCCTACAATTTTGG+AGG | + | chr1.3:29868727-29868746 | None:intergenic | 25.0% |
!! | TTTTGTGGAATTGAAACTAA+GGG | - | chr1.3:29867312-29867331 | MS.gene53720:CDS | 25.0% |
!! | TTTTTGTGGAATTGAAACTA+AGG | - | chr1.3:29867311-29867330 | MS.gene53720:CDS | 25.0% |
!!! | ATACATGTTTCTTTTGAAGT+TGG | - | chr1.3:29868228-29868247 | MS.gene53720:intron | 25.0% |
!!! | TCTATTTTTAACTCCTTAAC+CGG | - | chr1.3:29865924-29865943 | MS.gene53720:intron | 25.0% |
!!! | TTCTTTTGAAGTTGGAAATT+AGG | - | chr1.3:29868236-29868255 | MS.gene53720:intron | 25.0% |
AAAGAGGTTACATGAAGTTT+GGG | - | chr1.3:29867423-29867442 | MS.gene53720:CDS | 30.0% | |
AAAGATCCATCGATATAGTA+AGG | - | chr1.3:29867454-29867473 | MS.gene53720:CDS | 30.0% | |
AAAGCAATACATGACGTTTA+TGG | + | chr1.3:29865153-29865172 | None:intergenic | 30.0% | |
AACAGCAAAAATCAAACCTA+GGG | - | chr1.3:29865354-29865373 | MS.gene53720:intron | 30.0% | |
AAGATCCATCGATATAGTAA+GGG | - | chr1.3:29867455-29867474 | MS.gene53720:CDS | 30.0% | |
AAGCAATACATGACGTTTAT+GGG | + | chr1.3:29865152-29865171 | None:intergenic | 30.0% | |
AAGGAGAAACATGAATGATA+AGG | + | chr1.3:29866068-29866087 | None:intergenic | 30.0% | |
AATAAGCCCTCAATTAAACA+GGG | + | chr1.3:29864129-29864148 | None:intergenic | 30.0% | |
AATTTGGCACTTGTATGTTT+GGG | - | chr1.3:29866298-29866317 | MS.gene53720:intron | 30.0% | |
ACCTCTTTCAAATAAGAACT+AGG | + | chr1.3:29867411-29867430 | None:intergenic | 30.0% | |
AGAAGTGAAGTTACAAGAAT+TGG | + | chr1.3:29866477-29866496 | None:intergenic | 30.0% | |
AGGAGAAACATGAATGATAA+GGG | + | chr1.3:29866067-29866086 | None:intergenic | 30.0% | |
ATTTCTGCATAAGAAAATGG+AGG | + | chr1.3:29866937-29866956 | None:intergenic | 30.0% | |
ATTTGTCCCTGTTTAATTGA+GGG | - | chr1.3:29864120-29864139 | MS.gene53720:intron | 30.0% | |
CAAATTTCTTACTTTCGGAA+AGG | + | chr1.3:29868274-29868293 | None:intergenic | 30.0% | |
CAATTAACTAACTAGAAAGC+AGG | + | chr1.3:29867811-29867830 | None:intergenic | 30.0% | |
CAGCATTTGTGAAACTATTT+GGG | + | chr1.3:29864320-29864339 | None:intergenic | 30.0% | |
CTAGATAAGTCAATCTAAAG+AGG | - | chr1.3:29864346-29864365 | MS.gene53720:CDS | 30.0% | |
CTGGAAAAACAAATTGAAGA+GGG | + | chr1.3:29868874-29868893 | None:intergenic | 30.0% | |
CTGGGTTAAAGAGTTATAAA+AGG | - | chr1.3:29865820-29865839 | MS.gene53720:intron | 30.0% | |
GAACTAAGCTCAATTTACTT+CGG | - | chr1.3:29864443-29864462 | MS.gene53720:intron | 30.0% | |
GAAGTGAAGTTACAAGAATT+GGG | + | chr1.3:29866476-29866495 | None:intergenic | 30.0% | |
GCTAAAAAGCTTCAATTAAG+TGG | - | chr1.3:29863675-29863694 | MS.gene53720:CDS | 30.0% | |
TAACTCCAATTCAGTTGAAA+CGG | - | chr1.3:29864830-29864849 | MS.gene53720:intron | 30.0% | |
TATGCTCTTTCACTTTCTTT+AGG | + | chr1.3:29863635-29863654 | None:intergenic | 30.0% | |
TATGTTGTGTTATGACTGTA+TGG | - | chr1.3:29864688-29864707 | MS.gene53720:CDS | 30.0% | |
TCAATTAAGTGGTAAGAAGA+AGG | - | chr1.3:29863686-29863705 | MS.gene53720:CDS | 30.0% | |
TCAGCATTTGTGAAACTATT+TGG | + | chr1.3:29864321-29864340 | None:intergenic | 30.0% | |
TCAGTGTTATGTAATTTCTG+TGG | - | chr1.3:29866141-29866160 | MS.gene53720:CDS | 30.0% | |
TCATCAACTGAATCAAAACT+TGG | + | chr1.3:29868083-29868102 | None:intergenic | 30.0% | |
TCTTTATGCATGCATGAATT+TGG | - | chr1.3:29866282-29866301 | MS.gene53720:intron | 30.0% | |
TCTTTCAAATAAGAACTAGG+TGG | + | chr1.3:29867408-29867427 | None:intergenic | 30.0% | |
TGATAAAGATGATGTTAGCA+AGG | - | chr1.3:29868977-29868996 | MS.gene53720:CDS | 30.0% | |
TGTATAGAATCTCAAGGTAA+CGG | + | chr1.3:29867182-29867201 | None:intergenic | 30.0% | |
TTAACATAGAAAAAAGGGTG+AGG | - | chr1.3:29865116-29865135 | MS.gene53720:intron | 30.0% | |
TTCAATTCCTGTTCCTTAAA+AGG | + | chr1.3:29863744-29863763 | None:intergenic | 30.0% | |
TTCCATAGATAGTTCAGATA+GGG | - | chr1.3:29865003-29865022 | MS.gene53720:intron | 30.0% | |
TTGCAATTAAGTGATTGTCT+CGG | - | chr1.3:29865407-29865426 | MS.gene53720:intron | 30.0% | |
TTTCCATAGATAGTTCAGAT+AGG | - | chr1.3:29865002-29865021 | MS.gene53720:intron | 30.0% | |
TTTCTGCATAAGAAAATGGA+GGG | + | chr1.3:29866936-29866955 | None:intergenic | 30.0% | |
! | AAACACTAAGAAAAGTGTGT+TGG | - | chr1.3:29868566-29868585 | MS.gene53720:intron | 30.0% |
! | ACCTAGTTCTTATTTGAAAG+AGG | - | chr1.3:29867407-29867426 | MS.gene53720:CDS | 30.0% |
! | CGATACTTTTCATGTTATAC+TGG | - | chr1.3:29866335-29866354 | MS.gene53720:intron | 30.0% |
! | CTATTACACTATTTTCTCTC+TGG | - | chr1.3:29867588-29867607 | MS.gene53720:CDS | 30.0% |
! | GGAAGTCTAATCCTTTTTAT+TGG | - | chr1.3:29867992-29868011 | MS.gene53720:intron | 30.0% |
! | TTTTATCGGACAACAAGTTT+TGG | + | chr1.3:29864409-29864428 | None:intergenic | 30.0% |
!! | AGAAAACTCTGAAACTATCT+TGG | + | chr1.3:29868374-29868393 | None:intergenic | 30.0% |
!! | ATCAGAGATGTTACTTTATG+TGG | - | chr1.3:29865674-29865693 | MS.gene53720:intron | 30.0% |
!! | GTATAACATGAAAAGTATCG+TGG | + | chr1.3:29866335-29866354 | None:intergenic | 30.0% |
!! | TCAGAGATGTTACTTTATGT+GGG | - | chr1.3:29865675-29865694 | MS.gene53720:intron | 30.0% |
!!! | TGATTTTTTTAGATCTCCCT+AGG | + | chr1.3:29865373-29865392 | None:intergenic | 30.0% |
!!! | TTGAAGCTTTTTAGCTTCTT+TGG | + | chr1.3:29863670-29863689 | None:intergenic | 30.0% |
AAATATTCCCAGAAGGGAAA+AGG | + | chr1.3:29865215-29865234 | None:intergenic | 35.0% | |
AACATTGATGAGGTCTACAA+TGG | - | chr1.3:29868403-29868422 | MS.gene53720:intron | 35.0% | |
AAGAGGTTACATGAAGTTTG+GGG | - | chr1.3:29867424-29867443 | MS.gene53720:CDS | 35.0% | |
AAGCAGGATCAATATTGTGA+AGG | + | chr1.3:29867795-29867814 | None:intergenic | 35.0% | |
AAGTCATAATCACCATCCAT+GGG | + | chr1.3:29869131-29869150 | None:intergenic | 35.0% | |
AAGTCATGTCTTAGTGCTTT+AGG | + | chr1.3:29867664-29867683 | None:intergenic | 35.0% | |
AATATTCCCAGAAGGGAAAA+GGG | + | chr1.3:29865214-29865233 | None:intergenic | 35.0% | |
AATTAAACAGGGACAAATGC+AGG | + | chr1.3:29864118-29864137 | None:intergenic | 35.0% | |
ACATGATCTAACTCAACAGT+AGG | + | chr1.3:29868457-29868476 | None:intergenic | 35.0% | |
ACTGTTGCGAAGACTAATAA+AGG | - | chr1.3:29864882-29864901 | MS.gene53720:intron | 35.0% | |
ATCCTGGTATTCCAAATGAT+TGG | - | chr1.3:29863718-29863737 | MS.gene53720:CDS | 35.0% | |
ATGGATGAAAAGATAGGATC+AGG | + | chr1.3:29867751-29867770 | None:intergenic | 35.0% | |
ATTGTCTCATCAAAGATGAG+AGG | + | chr1.3:29868499-29868518 | None:intergenic | 35.0% | |
CAACAGCAAAAATCAAACCT+AGG | - | chr1.3:29865353-29865372 | MS.gene53720:intron | 35.0% | |
CAACGGAACTTGAATACAAT+GGG | + | chr1.3:29867487-29867506 | None:intergenic | 35.0% | |
CAATAAGCCCTCAATTAAAC+AGG | + | chr1.3:29864130-29864149 | None:intergenic | 35.0% | |
CAATGATGAGGATGAATCTA+TGG | - | chr1.3:29868950-29868969 | MS.gene53720:CDS | 35.0% | |
CACACACTACAAATTGAAGA+GGG | + | chr1.3:29868827-29868846 | None:intergenic | 35.0% | |
CACTGCATTGTCCAATAAAA+AGG | + | chr1.3:29868006-29868025 | None:intergenic | 35.0% | |
CAGCTTACATAAGCACTTAT+AGG | + | chr1.3:29864166-29864185 | None:intergenic | 35.0% | |
CAGTATTAGAGTCTAGAAGA+GGG | + | chr1.3:29867012-29867031 | None:intergenic | 35.0% | |
CATTTGTCCCTGTTTAATTG+AGG | - | chr1.3:29864119-29864138 | MS.gene53720:intron | 35.0% | |
CCTGGAAAAACAAATTGAAG+AGG | + | chr1.3:29868875-29868894 | None:intergenic | 35.0% | |
CTAACTCAACAGTAGGTTTA+AGG | + | chr1.3:29868450-29868469 | None:intergenic | 35.0% | |
CTTTGATGAGACAATGTTAG+AGG | - | chr1.3:29868504-29868523 | MS.gene53720:intron | 35.0% | |
GAAAGAGGTTACATGAAGTT+TGG | - | chr1.3:29867422-29867441 | MS.gene53720:CDS | 35.0% | |
GAATTTGGCACTTGTATGTT+TGG | - | chr1.3:29866297-29866316 | MS.gene53720:intron | 35.0% | |
GAGAATTAATTAATGGGGGA+AGG | + | chr1.3:29866842-29866861 | None:intergenic | 35.0% | |
GTATAGAATCTCAAGGTAAC+GGG | + | chr1.3:29867181-29867200 | None:intergenic | 35.0% | |
GTTATCATGATCTCAGTTGA+AGG | - | chr1.3:29867147-29867166 | MS.gene53720:intron | 35.0% | |
GTTCTTCATGACTGGAATAT+AGG | - | chr1.3:29868182-29868201 | MS.gene53720:intron | 35.0% | |
TACAGAGAGTAAGAGTAAGA+GGG | - | chr1.3:29863584-29863603 | MS.gene53720:CDS | 35.0% | |
TCAACGGAACTTGAATACAA+TGG | + | chr1.3:29867488-29867507 | None:intergenic | 35.0% | |
TCACACACTACAAATTGAAG+AGG | + | chr1.3:29868828-29868847 | None:intergenic | 35.0% | |
TCAGTATTAGAGTCTAGAAG+AGG | + | chr1.3:29867013-29867032 | None:intergenic | 35.0% | |
TCATTGTCATCAACATTCTC+AGG | + | chr1.3:29868936-29868955 | None:intergenic | 35.0% | |
TCCTTAAAAGGCCAATCATT+TGG | + | chr1.3:29863732-29863751 | None:intergenic | 35.0% | |
TGACACATATCTACTTTGGA+GGG | - | chr1.3:29868593-29868612 | MS.gene53720:intron | 35.0% | |
TGTTGTAATTGCACTGTTTC+AGG | - | chr1.3:29868292-29868311 | MS.gene53720:intron | 35.0% | |
TTACAGAGAGTAAGAGTAAG+AGG | - | chr1.3:29863583-29863602 | MS.gene53720:CDS | 35.0% | |
TTACTTCAAAAAGGACACGA+TGG | - | chr1.3:29869160-29869179 | MS.gene53720:intron | 35.0% | |
TTGACACATATCTACTTTGG+AGG | - | chr1.3:29868592-29868611 | MS.gene53720:intron | 35.0% | |
TTGTCTCATCAAAGATGAGA+GGG | + | chr1.3:29868498-29868517 | None:intergenic | 35.0% | |
! | AATAGGTTACTAGTATTGGG+AGG | + | chr1.3:29867218-29867237 | None:intergenic | 35.0% |
! | ATAGGTTACTAGTATTGGGA+GGG | + | chr1.3:29867217-29867236 | None:intergenic | 35.0% |
! | GATCCTATCTTTTCATCCAT+CGG | - | chr1.3:29867751-29867770 | MS.gene53720:intron | 35.0% |
! | GGACAAAAATGTTAAGTTGC+TGG | - | chr1.3:29866698-29866717 | MS.gene53720:intron | 35.0% |
! | GTAATGCTACTTGAAATGGA+TGG | - | chr1.3:29866884-29866903 | MS.gene53720:intron | 35.0% |
! | TAGAAGCACATGTAATGAGA+GGG | + | chr1.3:29867622-29867641 | None:intergenic | 35.0% |
! | TCATGTCTAACTCTTGTTTC+AGG | - | chr1.3:29864770-29864789 | MS.gene53720:intron | 35.0% |
! | TGGAGTAATGCTACTTGAAA+TGG | - | chr1.3:29866880-29866899 | MS.gene53720:intron | 35.0% |
! | TTAGAAGCACATGTAATGAG+AGG | + | chr1.3:29867623-29867642 | None:intergenic | 35.0% |
!! | CCTCTTCAATTTGTTTTTCC+AGG | - | chr1.3:29868872-29868891 | MS.gene53720:intron | 35.0% |
!! | GAATGTTGATGACAATGATG+AGG | - | chr1.3:29868938-29868957 | MS.gene53720:CDS | 35.0% |
!! | TTATTAGTCTTCGCAACAGT+AGG | + | chr1.3:29864882-29864901 | None:intergenic | 35.0% |
!!! | AGGCTTGGCTTGATTTTTTT+GGG | + | chr1.3:29867362-29867381 | None:intergenic | 35.0% |
!!! | ATTTTGAAATCCCGACTTTC+AGG | - | chr1.3:29867961-29867980 | MS.gene53720:intron | 35.0% |
!!! | GTTTTGGAAAGAAAACCAAG+TGG | + | chr1.3:29864393-29864412 | None:intergenic | 35.0% |
!!! | TCCAAATGATTGGCCTTTTA+AGG | - | chr1.3:29863728-29863747 | MS.gene53720:CDS | 35.0% |
AAGAAGGTTGAGAAAGATCC+TGG | - | chr1.3:29863702-29863721 | MS.gene53720:CDS | 40.0% | |
AAGACTACTCTTGCCAACAT+TGG | + | chr1.3:29866598-29866617 | None:intergenic | 40.0% | |
AAGTTGGCAGAACAAGATGA+AGG | - | chr1.3:29868909-29868928 | MS.gene53720:intron | 40.0% | |
AATAACCCGATCCAAATCAC+TGG | + | chr1.3:29865035-29865054 | None:intergenic | 40.0% | |
ACAGATTGTGGCTACTGTTA+GGG | - | chr1.3:29868109-29868128 | MS.gene53720:intron | 40.0% | |
ACGAGGGTTTGTAGAACAAA+AGG | + | chr1.3:29866087-29866106 | None:intergenic | 40.0% | |
AGAAAGAAGCTCGTAGAGAA+AGG | - | chr1.3:29863811-29863830 | MS.gene53720:CDS | 40.0% | |
AGAAGCCGTTTCAACTGAAT+TGG | + | chr1.3:29864838-29864857 | None:intergenic | 40.0% | |
AGACTACTCTTGCCAACATT+GGG | + | chr1.3:29866597-29866616 | None:intergenic | 40.0% | |
AGAGTCTGATGTCATACTAG+AGG | - | chr1.3:29865057-29865076 | MS.gene53720:intron | 40.0% | |
AGATGATGTTAGCAAGGAGA+AGG | - | chr1.3:29868983-29869002 | MS.gene53720:CDS | 40.0% | |
AGGGAGCTAAAATTAACTCG+AGG | + | chr1.3:29868707-29868726 | None:intergenic | 40.0% | |
ATATTCCCAGAAGGGAAAAG+GGG | + | chr1.3:29865213-29865232 | None:intergenic | 40.0% | |
ATTATACTATGCCCCCAGTT+AGG | - | chr1.3:29868326-29868345 | MS.gene53720:intron | 40.0% | |
ATTCCACAAAAAGCAAGCAG+TGG | + | chr1.3:29867303-29867322 | None:intergenic | 40.0% | |
CAAATAAGAACTAGGTGGTG+AGG | + | chr1.3:29867403-29867422 | None:intergenic | 40.0% | |
CAAGAATCGTTCTTCATGAC+TGG | - | chr1.3:29868174-29868193 | MS.gene53720:intron | 40.0% | |
CATGATCTCAGTTGAAGGAA+TGG | - | chr1.3:29867152-29867171 | MS.gene53720:intron | 40.0% | |
CTCAAGACATCAATCACTGT+TGG | - | chr1.3:29866558-29866577 | MS.gene53720:intron | 40.0% | |
CTTCCGATGGATGAAAAGAT+AGG | + | chr1.3:29867757-29867776 | None:intergenic | 40.0% | |
CTTGTGATTCACATGCTTCT+TGG | - | chr1.3:29865708-29865727 | MS.gene53720:intron | 40.0% | |
GAAAATGGAGGGTTATACAG+AGG | + | chr1.3:29866925-29866944 | None:intergenic | 40.0% | |
GAAAGAAGCTCGTAGAGAAA+GGG | - | chr1.3:29863812-29863831 | MS.gene53720:CDS | 40.0% | |
GAAGTCATAATCACCATCCA+TGG | + | chr1.3:29869132-29869151 | None:intergenic | 40.0% | |
GAATTATGCAAGAAGCGACA+AGG | - | chr1.3:29865457-29865476 | MS.gene53720:intron | 40.0% | |
GAGAAGTTATATACAGCGGA+GGG | - | chr1.3:29869032-29869051 | MS.gene53720:CDS | 40.0% | |
GCTACTTGAAATGGATGGTT+GGG | - | chr1.3:29866889-29866908 | MS.gene53720:intron | 40.0% | |
GGATGACAAACCAGTTAAGT+TGG | - | chr1.3:29868893-29868912 | MS.gene53720:intron | 40.0% | |
GTCAAAGCAAGAGATTCGTT+TGG | - | chr1.3:29866677-29866696 | MS.gene53720:intron | 40.0% | |
GTGAAGTTACAAGAATTGGG+AGG | + | chr1.3:29866473-29866492 | None:intergenic | 40.0% | |
TAACAGTAGCCACAATCTGT+AGG | + | chr1.3:29868109-29868128 | None:intergenic | 40.0% | |
TACAGATTGTGGCTACTGTT+AGG | - | chr1.3:29868108-29868127 | MS.gene53720:intron | 40.0% | |
TCATGCCCTTACTATATCGA+TGG | + | chr1.3:29867463-29867482 | None:intergenic | 40.0% | |
TCTTGTTCTGCCAACTTAAC+TGG | + | chr1.3:29868906-29868925 | None:intergenic | 40.0% | |
TGAGAAGTTATATACAGCGG+AGG | - | chr1.3:29869031-29869050 | MS.gene53720:CDS | 40.0% | |
TGATGACTTCCTACAGATTG+TGG | - | chr1.3:29868097-29868116 | MS.gene53720:intron | 40.0% | |
TTAACACAACGAGTACCCAA+GGG | + | chr1.3:29865100-29865119 | None:intergenic | 40.0% | |
TTAGCTCCCTCCAAAATTGT+AGG | - | chr1.3:29868717-29868736 | MS.gene53720:intron | 40.0% | |
TTATACTATGCCCCCAGTTA+GGG | - | chr1.3:29868327-29868346 | MS.gene53720:intron | 40.0% | |
TTGGAGTTATCATCATCCAC+TGG | + | chr1.3:29864819-29864838 | None:intergenic | 40.0% | |
TTTGGTTGGAGGGAAATTGA+AGG | - | chr1.3:29868620-29868639 | MS.gene53720:intron | 40.0% | |
! | ACTGGGGGCATAGTATAATA+TGG | + | chr1.3:29868325-29868344 | None:intergenic | 40.0% |
! | CCAGAAAGGAGCATAAAAGA+TGG | + | chr1.3:29867098-29867117 | None:intergenic | 40.0% |
! | CCATCTTTTATGCTCCTTTC+TGG | - | chr1.3:29867095-29867114 | MS.gene53720:intron | 40.0% |
! | GACATCAATCACTGTTGGTT+TGG | - | chr1.3:29866563-29866582 | MS.gene53720:intron | 40.0% |
! | TCCTTTCTGGTCATGTTCTA+GGG | - | chr1.3:29867108-29867127 | MS.gene53720:intron | 40.0% |
! | TCTTAGTGCTTTAGGCATGT+GGG | + | chr1.3:29867656-29867675 | None:intergenic | 40.0% |
! | TCTTGTTTCAGGCTCGTAAA+AGG | - | chr1.3:29864781-29864800 | MS.gene53720:intron | 40.0% |
! | TGCTACTTGAAATGGATGGT+TGG | - | chr1.3:29866888-29866907 | MS.gene53720:intron | 40.0% |
!! | ACTTAACTGGTTTGTCATCC+TGG | + | chr1.3:29868893-29868912 | None:intergenic | 40.0% |
!! | GAGGGTCTCTTTTGATTCAA+AGG | + | chr1.3:29868809-29868828 | None:intergenic | 40.0% |
!! | TCAATCACTGTTGGTTTGGT+TGG | - | chr1.3:29866567-29866586 | MS.gene53720:intron | 40.0% |
!!! | GAGGCTTGGCTTGATTTTTT+TGG | + | chr1.3:29867363-29867382 | None:intergenic | 40.0% |
!!! | GGCTTGGCTTGATTTTTTTG+GGG | + | chr1.3:29867361-29867380 | None:intergenic | 40.0% |
!!! | TGATTGGCCTTTTAAGGAAC+AGG | - | chr1.3:29863734-29863753 | MS.gene53720:CDS | 40.0% |
!!! | TTACCACTGCTTGCTTTTTG+TGG | - | chr1.3:29867297-29867316 | MS.gene53720:CDS | 40.0% |
AAATGCTAACTAGCTCCCCT+GGG | - | chr1.3:29865794-29865813 | MS.gene53720:intron | 45.0% | |
AAGAGATATCAGCACCCTAG+CGG | + | chr1.3:29868051-29868070 | None:intergenic | 45.0% | |
AGAACGTGCTCTTGCTGAAT+TGG | - | chr1.3:29863782-29863801 | MS.gene53720:CDS | 45.0% | |
AGGAGATGACTTCAAGTACC+TGG | + | chr1.3:29866822-29866841 | None:intergenic | 45.0% | |
ATCAACCTCAACACCAGACA+TGG | + | chr1.3:29869252-29869271 | None:intergenic | 45.0% | |
CAACCAGGCACTTCATATCA+GGG | + | chr1.3:29867525-29867544 | None:intergenic | 45.0% | |
CAGATTGTGGCTACTGTTAG+GGG | - | chr1.3:29868110-29868129 | MS.gene53720:intron | 45.0% | |
CAGTAGGGAATTCTTCTCGA+AGG | + | chr1.3:29865313-29865332 | None:intergenic | 45.0% | |
CGCAACAGTAGGAACACTTT+CGG | + | chr1.3:29864871-29864890 | None:intergenic | 45.0% | |
CTTCAAGTACCTGGGCTAAT+TGG | + | chr1.3:29866813-29866832 | None:intergenic | 45.0% | |
GAAAAAAGGGTGAGGAAAGC+AGG | - | chr1.3:29865124-29865143 | MS.gene53720:intron | 45.0% | |
GAAACTATCTTGGCCTCTGA+AGG | + | chr1.3:29868364-29868383 | None:intergenic | 45.0% | |
GAACTAGGTGGTGAGGTTAA+AGG | + | chr1.3:29867396-29867415 | None:intergenic | 45.0% | |
GAAGGGAAAAGGGGAGAAAA+AGG | + | chr1.3:29865204-29865223 | None:intergenic | 45.0% | |
GGAGATGACTTCAAGTACCT+GGG | + | chr1.3:29866821-29866840 | None:intergenic | 45.0% | |
GGCCCTATCTGAACTATCTA+TGG | + | chr1.3:29865008-29865027 | None:intergenic | 45.0% | |
GGTTAAAGGCAGCTAAATCG+AGG | + | chr1.3:29867382-29867401 | None:intergenic | 45.0% | |
GTTAACACAACGAGTACCCA+AGG | + | chr1.3:29865101-29865120 | None:intergenic | 45.0% | |
GTTCTCCTTGATCCCTAACT+GGG | + | chr1.3:29868342-29868361 | None:intergenic | 45.0% | |
GTTGGAGGGAAATTGAAGGA+GGG | - | chr1.3:29868624-29868643 | MS.gene53720:intron | 45.0% | |
GTTTCAGGCTCGTAAAAGGA+AGG | - | chr1.3:29864785-29864804 | MS.gene53720:intron | 45.0% | |
TCAAAGATGAGAGGGCAACT+TGG | + | chr1.3:29868490-29868509 | None:intergenic | 45.0% | |
TCAACCAGGCACTTCATATC+AGG | + | chr1.3:29867526-29867545 | None:intergenic | 45.0% | |
TCAACCTCAACACCAGACAT+GGG | + | chr1.3:29869251-29869270 | None:intergenic | 45.0% | |
TCCCAATAGAGCCTGAAAGT+CGG | + | chr1.3:29867975-29867994 | None:intergenic | 45.0% | |
TGCACTTGAAAGCGACAGTA+GGG | + | chr1.3:29865328-29865347 | None:intergenic | 45.0% | |
TTAGCTGATCCAATTAGCCC+AGG | - | chr1.3:29866801-29866820 | MS.gene53720:intron | 45.0% | |
TTCTCCTTGATCCCTAACTG+GGG | + | chr1.3:29868341-29868360 | None:intergenic | 45.0% | |
! | CCTTTGCCAGTGATTTGGAT+CGG | - | chr1.3:29865026-29865045 | MS.gene53720:intron | 45.0% |
! | CTCCTTTCTGGTCATGTTCT+AGG | - | chr1.3:29867107-29867126 | MS.gene53720:intron | 45.0% |
! | CTTAGTGCTTTAGGCATGTG+GGG | + | chr1.3:29867655-29867674 | None:intergenic | 45.0% |
! | CTTTGCCAGTGATTTGGATC+GGG | - | chr1.3:29865027-29865046 | MS.gene53720:intron | 45.0% |
! | GGCCAATCATTTGGAATACC+AGG | + | chr1.3:29863723-29863742 | None:intergenic | 45.0% |
! | GTCTTAGTGCTTTAGGCATG+TGG | + | chr1.3:29867657-29867676 | None:intergenic | 45.0% |
! | TCTACTTTGGAGGGTCTGTT+TGG | - | chr1.3:29868602-29868621 | MS.gene53720:intron | 45.0% |
! | TTCTCTGCTCGCCTCAATTT+TGG | + | chr1.3:29869068-29869087 | None:intergenic | 45.0% |
! | TTTCTCCCCTTTTCCCTTCT+GGG | - | chr1.3:29865205-29865224 | MS.gene53720:intron | 45.0% |
! | TTTTCTCCCCTTTTCCCTTC+TGG | - | chr1.3:29865204-29865223 | MS.gene53720:intron | 45.0% |
!!! | AGATTTTTTTTTTTTTTTAA+TGG | - | chr1.3:29863991-29864010 | MS.gene53720:intron | 5.0% |
AACACCAGACATGGGAACCT+CGG | + | chr1.3:29869243-29869262 | None:intergenic | 50.0% | |
AAGATGAGAGGGCAACTTGG+TGG | + | chr1.3:29868487-29868506 | None:intergenic | 50.0% | |
AAGGCAGCTAAATCGAGGCT+TGG | + | chr1.3:29867377-29867396 | None:intergenic | 50.0% | |
AATGCTAACTAGCTCCCCTG+GGG | - | chr1.3:29865795-29865814 | MS.gene53720:intron | 50.0% | |
AGAGATATCAGCACCCTAGC+GGG | + | chr1.3:29868050-29868069 | None:intergenic | 50.0% | |
AGATCTTGTCCCTCGAGAGT+CGG | - | chr1.3:29865268-29865287 | MS.gene53720:intron | 50.0% | |
AGCTCATCTGATCCCATGGA+TGG | - | chr1.3:29869116-29869135 | MS.gene53720:CDS | 50.0% | |
AGTCCAGCATGACAACACCA+GGG | + | chr1.3:29866728-29866747 | None:intergenic | 50.0% | |
ATCCATGGGATCAGATGAGC+TGG | + | chr1.3:29869117-29869136 | None:intergenic | 50.0% | |
CCCAATAGAGCCTGAAAGTC+GGG | + | chr1.3:29867974-29867993 | None:intergenic | 50.0% | |
CCCGACTTTCAGGCTCTATT+GGG | - | chr1.3:29867971-29867990 | MS.gene53720:intron | 50.0% | |
CCGATCCAAATCACTGGCAA+AGG | + | chr1.3:29865029-29865048 | None:intergenic | 50.0% | |
CTGCACTTGAAAGCGACAGT+AGG | + | chr1.3:29865329-29865348 | None:intergenic | 50.0% | |
GAAATGCTAACTAGCTCCCC+TGG | - | chr1.3:29865793-29865812 | MS.gene53720:intron | 50.0% | |
GCCCTAGAACATGACCAGAA+AGG | + | chr1.3:29867112-29867131 | None:intergenic | 50.0% | |
GCGAGTCTACTCAGAGATGT+AGG | - | chr1.3:29864659-29864678 | MS.gene53720:CDS | 50.0% | |
GGATCAAGGAGAACCTTCAG+AGG | - | chr1.3:29868348-29868367 | MS.gene53720:intron | 50.0% | |
GGTTCTCCTTGATCCCTAAC+TGG | + | chr1.3:29868343-29868362 | None:intergenic | 50.0% | |
GGTTGGAGGGAAATTGAAGG+AGG | - | chr1.3:29868623-29868642 | MS.gene53720:intron | 50.0% | |
GTTAGGGGCAAGCTCAAGAA+GGG | - | chr1.3:29868125-29868144 | MS.gene53720:intron | 50.0% | |
TACTAGAGGTCCTTGATGCC+CGG | - | chr1.3:29865071-29865090 | MS.gene53720:intron | 50.0% | |
TAGGGCCTTTGCCAGTGATT+TGG | - | chr1.3:29865021-29865040 | MS.gene53720:intron | 50.0% | |
TATGCTAACCGGTGCCTCAT+GGG | + | chr1.3:29865952-29865971 | None:intergenic | 50.0% | |
TCAGGCTCGTAAAAGGAAGG+CGG | - | chr1.3:29864788-29864807 | MS.gene53720:intron | 50.0% | |
TCCCGACTTTCAGGCTCTAT+TGG | - | chr1.3:29867970-29867989 | MS.gene53720:intron | 50.0% | |
TCGATGTCAGTGCTAGTGCT+GGG | - | chr1.3:29866646-29866665 | MS.gene53720:intron | 50.0% | |
TCTCCTTGATCCCTAACTGG+GGG | + | chr1.3:29868340-29868359 | None:intergenic | 50.0% | |
TGATGAACAAGTCAGCACCG+AGG | - | chr1.3:29869223-29869242 | MS.gene53720:intron | 50.0% | |
TGTGTGTGTCATGCTCCACT+TGG | - | chr1.3:29864375-29864394 | MS.gene53720:CDS | 50.0% | |
TGTTAGGGGCAAGCTCAAGA+AGG | - | chr1.3:29868124-29868143 | MS.gene53720:intron | 50.0% | |
TTATGCTAACCGGTGCCTCA+TGG | + | chr1.3:29865953-29865972 | None:intergenic | 50.0% | |
TTGGTTGGACTGCCCAATGT+TGG | - | chr1.3:29866582-29866601 | MS.gene53720:intron | 50.0% | |
! | ACTTCTCAACCGACTCTCGA+GGG | + | chr1.3:29865280-29865299 | None:intergenic | 50.0% |
! | AGACCCTGATATGAAGTGCC+TGG | - | chr1.3:29867519-29867538 | MS.gene53720:intron | 50.0% |
! | CTTTGGAGGGTCTGTTTGGT+TGG | - | chr1.3:29868606-29868625 | MS.gene53720:intron | 50.0% |
! | GTTAAGTTGCTGGATTGCCC+TGG | - | chr1.3:29866708-29866727 | MS.gene53720:intron | 50.0% |
!! | TAGCACTGACATCGACAGCA+TGG | + | chr1.3:29866641-29866660 | None:intergenic | 50.0% |
AACGAGTACCCAAGGGATCC+CGG | + | chr1.3:29865093-29865112 | None:intergenic | 55.0% | |
ACTAGAGGTCCTTGATGCCC+GGG | - | chr1.3:29865072-29865091 | MS.gene53720:intron | 55.0% | |
ACTCTTTAACCCAGTGCCCC+AGG | + | chr1.3:29865814-29865833 | None:intergenic | 55.0% | |
AGCCAGCTCATCTGATCCCA+TGG | - | chr1.3:29869112-29869131 | MS.gene53720:CDS | 55.0% | |
AGGCTCGTAAAAGGAAGGCG+GGG | - | chr1.3:29864790-29864809 | MS.gene53720:intron | 55.0% | |
ATGCCCCCAGTTAGGGATCA+AGG | - | chr1.3:29868334-29868353 | MS.gene53720:intron | 55.0% | |
ATGGATGCTGACGCGAGTGA+CGG | - | chr1.3:29869179-29869198 | MS.gene53720:intron | 55.0% | |
CAGGCTCGTAAAAGGAAGGC+GGG | - | chr1.3:29864789-29864808 | MS.gene53720:intron | 55.0% | |
CTCGAGAGTCGGTTGAGAAG+TGG | - | chr1.3:29865279-29865298 | MS.gene53720:intron | 55.0% | |
CTCTTTAACCCAGTGCCCCA+GGG | + | chr1.3:29865813-29865832 | None:intergenic | 55.0% | |
GAGTCCAGCATGACAACACC+AGG | + | chr1.3:29866729-29866748 | None:intergenic | 55.0% | |
GGAGGGTCTGTTTGGTTGGA+GGG | - | chr1.3:29868610-29868629 | MS.gene53720:intron | 55.0% | |
GTCGATGTCAGTGCTAGTGC+TGG | - | chr1.3:29866645-29866664 | MS.gene53720:intron | 55.0% | |
TCTCAAGCTCTGTCCCGCTA+GGG | - | chr1.3:29868034-29868053 | MS.gene53720:intron | 55.0% | |
TCTTTAACCCAGTGCCCCAG+GGG | + | chr1.3:29865812-29865831 | None:intergenic | 55.0% | |
TGGAGGGTCTGTTTGGTTGG+AGG | - | chr1.3:29868609-29868628 | MS.gene53720:intron | 55.0% | |
TTCTCAAGCTCTGTCCCGCT+AGG | - | chr1.3:29868033-29868052 | MS.gene53720:intron | 55.0% | |
! | CACTTCTCAACCGACTCTCG+AGG | + | chr1.3:29865281-29865300 | None:intergenic | 55.0% |
! | GGTTCCCATGTCTGGTGTTG+AGG | - | chr1.3:29869244-29869263 | MS.gene53720:intron | 55.0% |
!! | TTGCCCTGGTGTTGTCATGC+TGG | - | chr1.3:29866722-29866741 | MS.gene53720:intron | 55.0% |
ACGAGTACCCAAGGGATCCC+GGG | + | chr1.3:29865092-29865111 | None:intergenic | 60.0% | |
AGGGGCAAGCTCAAGAAGGG+TGG | - | chr1.3:29868128-29868147 | MS.gene53720:intron | 60.0% | |
ATGCTGACGCGAGTGACGGT+GGG | - | chr1.3:29869183-29869202 | MS.gene53720:intron | 60.0% | |
CTCCTTAACCGGTGCCCATG+AGG | - | chr1.3:29865935-29865954 | MS.gene53720:intron | 60.0% | |
CTTGATGCCCGGGATCCCTT+GGG | - | chr1.3:29865082-29865101 | MS.gene53720:intron | 60.0% | |
GACGGTGGGGACGACAATGA+TGG | - | chr1.3:29869197-29869216 | MS.gene53720:intron | 60.0% | |
! | AGCACCGAGGTTCCCATGTC+TGG | - | chr1.3:29869236-29869255 | MS.gene53720:intron | 60.0% |
! | GTGCTAGTGCTGGGTCGACA+AGG | - | chr1.3:29866655-29866674 | MS.gene53720:intron | 60.0% |
!! | TGCCTCATGGGCACCGGTTA+AGG | + | chr1.3:29865940-29865959 | None:intergenic | 60.0% |
AACCGGTGCCCATGAGGCAC+CGG | - | chr1.3:29865941-29865960 | MS.gene53720:CDS | 65.0% | |
AACCGGTGCCTCATGGGCAC+CGG | + | chr1.3:29865946-29865965 | None:intergenic | 65.0% | |
AACTAGCTCCCCTGGGGCAC+TGG | - | chr1.3:29865801-29865820 | MS.gene53720:intron | 65.0% | |
AAGGAAGGCGGGGTTGCCAG+TGG | - | chr1.3:29864800-29864819 | MS.gene53720:intron | 65.0% | |
CCAAGGGATCCCGGGCATCA+AGG | + | chr1.3:29865084-29865103 | None:intergenic | 65.0% | |
CCTTGATGCCCGGGATCCCT+TGG | - | chr1.3:29865081-29865100 | MS.gene53720:intron | 65.0% | |
GATGCTGACGCGAGTGACGG+TGG | - | chr1.3:29869182-29869201 | MS.gene53720:intron | 65.0% | |
TGCTGACGCGAGTGACGGTG+GGG | - | chr1.3:29869184-29869203 | MS.gene53720:intron | 65.0% | |
! | ACTAGCTCCCCTGGGGCACT+GGG | - | chr1.3:29865802-29865821 | MS.gene53720:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 29863481 | 29869277 | 29863481 | ID=MS.gene53720 |
chr1.3 | mRNA | 29863481 | 29869277 | 29863481 | ID=MS.gene53720.t1;Parent=MS.gene53720 |
chr1.3 | exon | 29869259 | 29869277 | 29869259 | ID=MS.gene53720.t1.exon1;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29869259 | 29869277 | 29869259 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
chr1.3 | exon | 29868925 | 29869169 | 29868925 | ID=MS.gene53720.t1.exon2;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29868925 | 29869169 | 29868925 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
chr1.3 | exon | 29867855 | 29867966 | 29867855 | ID=MS.gene53720.t1.exon3;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29867855 | 29867966 | 29867855 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
chr1.3 | exon | 29867574 | 29867747 | 29867574 | ID=MS.gene53720.t1.exon4;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29867574 | 29867747 | 29867574 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
chr1.3 | exon | 29867280 | 29867488 | 29867280 | ID=MS.gene53720.t1.exon5;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29867280 | 29867488 | 29867280 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
chr1.3 | exon | 29865936 | 29866200 | 29865936 | ID=MS.gene53720.t1.exon6;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29865936 | 29866200 | 29865936 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
chr1.3 | exon | 29864555 | 29864734 | 29864555 | ID=MS.gene53720.t1.exon7;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29864555 | 29864734 | 29864555 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
chr1.3 | exon | 29864233 | 29864444 | 29864233 | ID=MS.gene53720.t1.exon8;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29864233 | 29864444 | 29864233 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
chr1.3 | exon | 29863481 | 29863864 | 29863481 | ID=MS.gene53720.t1.exon9;Parent=MS.gene53720.t1 |
chr1.3 | CDS | 29863481 | 29863864 | 29863481 | ID=cds.MS.gene53720.t1;Parent=MS.gene53720.t1 |
Gene Sequence |
Protein sequence |