Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25769.t1 | XP_004502067.2 | 79.9 | 478 | 82 | 6 | 3 | 469 | 4 | 478 | 1.80E-197 | 698.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25769.t1 | Q8LBF7 | 59.0 | 234 | 94 | 2 | 6 | 238 | 8 | 240 | 1.1e-70 | 268.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25769.t1 | A0A1S2YAT1 | 79.9 | 478 | 82 | 6 | 3 | 469 | 4 | 478 | 1.3e-197 | 698.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25769.t1 | MTR_3g080990 | 99.184 | 245 | 2 | 0 | 1 | 245 | 1 | 245 | 5.18e-176 | 494 |
MS.gene25769.t1 | MTR_3g081030 | 99.074 | 216 | 2 | 0 | 254 | 469 | 1 | 216 | 1.85e-157 | 445 |
MS.gene25769.t1 | MTR_8g099730 | 69.008 | 242 | 74 | 1 | 2 | 243 | 12 | 252 | 9.06e-122 | 356 |
MS.gene25769.t1 | MTR_8g099730 | 68.783 | 189 | 58 | 1 | 55 | 243 | 1 | 188 | 8.05e-91 | 274 |
MS.gene25769.t1 | MTR_6g007633 | 53.275 | 229 | 106 | 1 | 1 | 228 | 1 | 229 | 4.33e-79 | 246 |
MS.gene25769.t1 | MTR_6g007637 | 54.460 | 213 | 96 | 1 | 3 | 214 | 4 | 216 | 1.49e-75 | 237 |
MS.gene25769.t1 | MTR_6g007623 | 51.131 | 221 | 107 | 1 | 8 | 227 | 5 | 225 | 7.26e-70 | 222 |
MS.gene25769.t1 | MTR_4g106990 | 49.215 | 191 | 97 | 0 | 28 | 218 | 35 | 225 | 2.07e-61 | 200 |
MS.gene25769.t1 | MTR_1g029380 | 44.813 | 241 | 119 | 5 | 5 | 233 | 2 | 240 | 8.46e-56 | 186 |
MS.gene25769.t1 | MTR_8g042490 | 42.009 | 219 | 126 | 1 | 2 | 220 | 8 | 225 | 1.70e-53 | 179 |
MS.gene25769.t1 | MTR_3g089125 | 46.411 | 209 | 111 | 1 | 5 | 213 | 2 | 209 | 1.97e-53 | 180 |
MS.gene25769.t1 | MTR_6g007610 | 43.777 | 233 | 113 | 4 | 1 | 220 | 1 | 228 | 1.24e-50 | 172 |
MS.gene25769.t1 | MTR_2g073190 | 40.000 | 225 | 133 | 2 | 1 | 225 | 7 | 229 | 1.23e-46 | 172 |
MS.gene25769.t1 | MTR_2g436310 | 42.791 | 215 | 121 | 1 | 11 | 225 | 8 | 220 | 2.04e-46 | 161 |
MS.gene25769.t1 | MTR_5g067530 | 41.935 | 217 | 116 | 4 | 10 | 222 | 12 | 222 | 2.92e-45 | 159 |
MS.gene25769.t1 | MTR_8g096320 | 41.395 | 215 | 125 | 1 | 3 | 217 | 4 | 217 | 1.12e-44 | 157 |
MS.gene25769.t1 | MTR_1g028460 | 39.720 | 214 | 127 | 1 | 4 | 215 | 2 | 215 | 7.36e-43 | 152 |
MS.gene25769.t1 | MTR_3g090940 | 34.177 | 237 | 154 | 1 | 4 | 238 | 2 | 238 | 6.71e-42 | 149 |
MS.gene25769.t1 | MTR_3g090950 | 35.043 | 234 | 148 | 3 | 8 | 238 | 6 | 238 | 9.65e-42 | 149 |
MS.gene25769.t1 | MTR_8g096310 | 34.553 | 246 | 146 | 5 | 10 | 247 | 11 | 249 | 1.31e-41 | 149 |
MS.gene25769.t1 | MTR_3g098910 | 35.526 | 228 | 141 | 4 | 12 | 237 | 13 | 236 | 2.56e-40 | 147 |
MS.gene25769.t1 | MTR_2g007890 | 38.095 | 210 | 125 | 3 | 12 | 220 | 16 | 221 | 9.55e-40 | 145 |
MS.gene25769.t1 | MTR_5g092600 | 38.537 | 205 | 123 | 2 | 23 | 227 | 24 | 225 | 9.33e-39 | 141 |
MS.gene25769.t1 | MTR_7g007490 | 35.950 | 242 | 144 | 3 | 10 | 243 | 12 | 250 | 5.04e-38 | 139 |
MS.gene25769.t1 | MTR_3g098930 | 40.513 | 195 | 106 | 3 | 4 | 194 | 6 | 194 | 2.48e-35 | 130 |
MS.gene25769.t1 | MTR_7g405730 | 39.706 | 204 | 117 | 3 | 12 | 213 | 13 | 212 | 3.87e-31 | 121 |
MS.gene25769.t1 | MTR_7g405710 | 38.605 | 215 | 126 | 4 | 12 | 224 | 13 | 223 | 2.11e-30 | 119 |
MS.gene25769.t1 | MTR_8g096320 | 39.877 | 163 | 97 | 1 | 55 | 217 | 1 | 162 | 2.34e-29 | 114 |
MS.gene25769.t1 | MTR_4g030070 | 41.176 | 136 | 79 | 1 | 285 | 420 | 24 | 158 | 6.75e-25 | 102 |
MS.gene25769.t1 | MTR_3g071300 | 33.333 | 165 | 91 | 5 | 282 | 436 | 17 | 172 | 5.01e-18 | 82.0 |
MS.gene25769.t1 | MTR_4g056590 | 48.649 | 74 | 36 | 1 | 345 | 418 | 98 | 169 | 8.11e-17 | 79.0 |
MS.gene25769.t1 | MTR_1g074190 | 42.063 | 126 | 57 | 5 | 299 | 417 | 60 | 176 | 4.53e-15 | 76.6 |
MS.gene25769.t1 | MTR_1g082550 | 46.970 | 66 | 35 | 0 | 372 | 437 | 127 | 192 | 2.79e-14 | 74.7 |
MS.gene25769.t1 | MTR_8g032690 | 54.348 | 46 | 21 | 0 | 372 | 417 | 19 | 64 | 3.98e-14 | 68.9 |
MS.gene25769.t1 | MTR_8g063660 | 36.364 | 121 | 70 | 2 | 348 | 467 | 69 | 183 | 4.09e-14 | 73.6 |
MS.gene25769.t1 | MTR_4g063070 | 37.634 | 93 | 52 | 2 | 332 | 418 | 290 | 382 | 5.69e-14 | 73.9 |
MS.gene25769.t1 | MTR_7g113800 | 33.974 | 156 | 86 | 6 | 268 | 419 | 25 | 167 | 8.94e-14 | 72.8 |
MS.gene25769.t1 | MTR_5g026730 | 31.967 | 122 | 79 | 2 | 299 | 420 | 25 | 142 | 2.27e-13 | 68.6 |
MS.gene25769.t1 | MTR_8g099515 | 46.154 | 65 | 32 | 1 | 353 | 414 | 315 | 379 | 3.92e-13 | 71.2 |
MS.gene25769.t1 | MTR_6g087150 | 33.333 | 123 | 75 | 2 | 296 | 417 | 48 | 164 | 6.99e-13 | 70.5 |
MS.gene25769.t1 | MTR_7g117540 | 36.290 | 124 | 64 | 3 | 302 | 420 | 36 | 149 | 8.82e-13 | 69.3 |
MS.gene25769.t1 | MTR_5g064990 | 38.983 | 118 | 56 | 7 | 344 | 457 | 113 | 218 | 1.30e-12 | 69.7 |
MS.gene25769.t1 | MTR_4g108830 | 38.806 | 67 | 41 | 0 | 348 | 414 | 122 | 188 | 2.01e-12 | 66.2 |
MS.gene25769.t1 | MTR_8g023400 | 32.836 | 134 | 73 | 5 | 293 | 414 | 31 | 159 | 2.28e-12 | 68.2 |
MS.gene25769.t1 | MTR_4g108830 | 38.806 | 67 | 41 | 0 | 348 | 414 | 150 | 216 | 2.67e-12 | 66.6 |
MS.gene25769.t1 | MTR_4g106680 | 43.662 | 71 | 39 | 1 | 348 | 417 | 107 | 177 | 2.89e-12 | 67.8 |
MS.gene25769.t1 | MTR_6g007737 | 44.444 | 81 | 44 | 1 | 348 | 427 | 134 | 214 | 3.43e-12 | 68.2 |
MS.gene25769.t1 | MTR_3g110190 | 35.484 | 124 | 67 | 3 | 298 | 414 | 17 | 134 | 4.53e-12 | 67.8 |
MS.gene25769.t1 | MTR_8g089880 | 45.455 | 66 | 29 | 1 | 372 | 437 | 153 | 211 | 4.61e-12 | 66.6 |
MS.gene25769.t1 | MTR_1g070140 | 32.867 | 143 | 82 | 5 | 293 | 423 | 41 | 181 | 4.92e-12 | 67.4 |
MS.gene25769.t1 | MTR_7g096690 | 32.704 | 159 | 92 | 5 | 289 | 438 | 8 | 160 | 4.94e-12 | 67.4 |
MS.gene25769.t1 | MTR_8g028465 | 40.000 | 75 | 44 | 1 | 346 | 420 | 89 | 162 | 8.11e-12 | 64.7 |
MS.gene25769.t1 | MTR_2g090905 | 34.375 | 96 | 52 | 2 | 341 | 429 | 33 | 124 | 8.74e-12 | 62.8 |
MS.gene25769.t1 | MTR_3g099650 | 32.143 | 140 | 80 | 6 | 286 | 419 | 53 | 183 | 8.98e-12 | 67.0 |
MS.gene25769.t1 | MTR_8g066780 | 46.032 | 63 | 34 | 0 | 372 | 434 | 142 | 204 | 1.04e-11 | 66.6 |
MS.gene25769.t1 | MTR_7g116200 | 40.678 | 59 | 35 | 0 | 356 | 414 | 77 | 135 | 1.09e-11 | 63.5 |
MS.gene25769.t1 | MTR_5g026720 | 53.061 | 49 | 23 | 0 | 372 | 420 | 93 | 141 | 1.10e-11 | 63.5 |
MS.gene25769.t1 | MTR_2g436100 | 42.857 | 77 | 41 | 2 | 344 | 419 | 92 | 166 | 1.10e-11 | 65.9 |
MS.gene25769.t1 | MTR_4g120270 | 62.791 | 43 | 16 | 0 | 372 | 414 | 104 | 146 | 1.14e-11 | 65.5 |
MS.gene25769.t1 | MTR_5g034790 | 45.588 | 68 | 36 | 1 | 348 | 414 | 117 | 184 | 1.42e-11 | 66.2 |
MS.gene25769.t1 | MTR_1g043410 | 57.778 | 45 | 19 | 0 | 370 | 414 | 121 | 165 | 1.52e-11 | 65.9 |
MS.gene25769.t1 | MTR_3g012550 | 27.907 | 129 | 90 | 1 | 295 | 420 | 28 | 156 | 1.85e-11 | 63.2 |
MS.gene25769.t1 | MTR_4g129420 | 44.928 | 69 | 36 | 1 | 352 | 418 | 122 | 190 | 2.08e-11 | 66.2 |
MS.gene25769.t1 | MTR_3g100400 | 52.083 | 48 | 23 | 0 | 372 | 419 | 156 | 203 | 2.21e-11 | 65.9 |
MS.gene25769.t1 | MTR_1g011380 | 39.655 | 58 | 34 | 1 | 365 | 422 | 334 | 390 | 2.35e-11 | 65.9 |
MS.gene25769.t1 | MTR_8g027745 | 51.923 | 52 | 25 | 0 | 369 | 420 | 311 | 362 | 2.54e-11 | 65.5 |
MS.gene25769.t1 | MTR_2g044570 | 46.296 | 54 | 29 | 0 | 372 | 425 | 83 | 136 | 3.01e-11 | 64.7 |
MS.gene25769.t1 | MTR_2g096350 | 35.955 | 89 | 52 | 2 | 331 | 414 | 89 | 177 | 3.05e-11 | 63.5 |
MS.gene25769.t1 | MTR_5g009200 | 44.615 | 65 | 33 | 1 | 353 | 414 | 328 | 392 | 3.61e-11 | 65.1 |
MS.gene25769.t1 | MTR_7g116210 | 41.818 | 55 | 32 | 0 | 360 | 414 | 23 | 77 | 3.73e-11 | 60.5 |
MS.gene25769.t1 | MTR_3g095560 | 37.662 | 77 | 46 | 1 | 351 | 425 | 113 | 189 | 3.87e-11 | 63.5 |
MS.gene25769.t1 | MTR_8g009190 | 47.170 | 53 | 28 | 0 | 372 | 424 | 105 | 157 | 4.03e-11 | 64.3 |
MS.gene25769.t1 | MTR_1g056350 | 44.118 | 68 | 34 | 2 | 357 | 420 | 84 | 151 | 4.09e-11 | 62.0 |
MS.gene25769.t1 | MTR_8g099495 | 48.980 | 49 | 25 | 0 | 366 | 414 | 341 | 389 | 5.34e-11 | 64.7 |
MS.gene25769.t1 | MTR_5g071930 | 30.631 | 111 | 75 | 1 | 308 | 418 | 27 | 135 | 5.65e-11 | 62.0 |
MS.gene25769.t1 | MTR_8g092960 | 38.272 | 81 | 47 | 2 | 353 | 430 | 109 | 189 | 6.26e-11 | 62.4 |
MS.gene25769.t1 | MTR_3g091620 | 37.778 | 90 | 52 | 2 | 363 | 452 | 120 | 205 | 6.28e-11 | 64.3 |
MS.gene25769.t1 | MTR_8g092840 | 38.272 | 81 | 47 | 2 | 353 | 430 | 119 | 199 | 6.90e-11 | 62.4 |
MS.gene25769.t1 | MTR_7g079280 | 35.526 | 76 | 46 | 1 | 348 | 420 | 81 | 156 | 7.05e-11 | 61.6 |
MS.gene25769.t1 | MTR_8g073120 | 37.143 | 70 | 41 | 1 | 348 | 414 | 71 | 140 | 7.74e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25769.t1 | AT4G10850 | 59.483 | 232 | 92 | 2 | 8 | 238 | 10 | 240 | 8.95e-93 | 282 |
MS.gene25769.t1 | AT1G66770 | 54.132 | 242 | 101 | 3 | 8 | 246 | 10 | 244 | 2.93e-84 | 260 |
MS.gene25769.t1 | AT5G62850 | 48.319 | 238 | 118 | 1 | 1 | 233 | 1 | 238 | 1.13e-80 | 250 |
MS.gene25769.t1 | AT3G28007 | 53.456 | 217 | 101 | 0 | 1 | 217 | 1 | 217 | 1.73e-69 | 222 |
MS.gene25769.t1 | AT5G62850 | 50.515 | 194 | 96 | 0 | 1 | 194 | 1 | 194 | 2.01e-68 | 218 |
MS.gene25769.t1 | AT5G40260 | 48.214 | 224 | 111 | 4 | 1 | 220 | 1 | 223 | 9.32e-59 | 193 |
MS.gene25769.t1 | AT1G21460 | 46.581 | 234 | 121 | 4 | 5 | 236 | 2 | 233 | 9.07e-58 | 191 |
MS.gene25769.t1 | AT4G15920 | 45.098 | 204 | 109 | 2 | 11 | 213 | 8 | 209 | 1.59e-49 | 169 |
MS.gene25769.t1 | AT5G50800 | 37.722 | 281 | 149 | 8 | 10 | 286 | 11 | 269 | 6.88e-49 | 169 |
MS.gene25769.t1 | AT5G40260 | 46.535 | 202 | 103 | 4 | 1 | 198 | 1 | 201 | 1.63e-48 | 166 |
MS.gene25769.t1 | AT4G25010 | 41.743 | 218 | 120 | 4 | 3 | 216 | 4 | 218 | 1.36e-47 | 166 |
MS.gene25769.t1 | AT1G21460 | 47.644 | 191 | 97 | 3 | 5 | 194 | 2 | 190 | 1.46e-47 | 163 |
MS.gene25769.t1 | AT3G16690 | 43.541 | 209 | 114 | 3 | 11 | 218 | 8 | 213 | 2.60e-47 | 163 |
MS.gene25769.t1 | AT3G16690 | 43.541 | 209 | 114 | 3 | 11 | 218 | 43 | 248 | 2.85e-47 | 164 |
MS.gene25769.t1 | AT4G24015 | 62.745 | 153 | 51 | 2 | 274 | 423 | 7 | 156 | 4.56e-47 | 160 |
MS.gene25769.t1 | AT3G14770 | 36.986 | 219 | 137 | 1 | 2 | 220 | 8 | 225 | 7.68e-44 | 154 |
MS.gene25769.t1 | AT5G23660 | 41.176 | 204 | 118 | 1 | 10 | 213 | 13 | 214 | 4.83e-43 | 154 |
MS.gene25769.t1 | AT2G39060 | 37.168 | 226 | 139 | 2 | 12 | 237 | 13 | 235 | 9.61e-43 | 152 |
MS.gene25769.t1 | AT5G13170 | 38.496 | 226 | 130 | 4 | 10 | 230 | 13 | 234 | 1.91e-42 | 152 |
MS.gene25769.t1 | AT5G53190 | 38.462 | 208 | 126 | 1 | 8 | 213 | 6 | 213 | 4.98e-41 | 147 |
MS.gene25769.t1 | AT5G50790 | 41.232 | 211 | 114 | 5 | 9 | 215 | 10 | 214 | 6.99e-41 | 148 |
MS.gene25769.t1 | AT3G48740 | 37.788 | 217 | 132 | 2 | 10 | 225 | 13 | 227 | 2.01e-38 | 141 |
MS.gene25769.t1 | AT4G10150 | 40.411 | 146 | 80 | 2 | 277 | 419 | 17 | 158 | 3.66e-30 | 117 |
MS.gene25769.t1 | AT1G33480 | 39.267 | 191 | 103 | 3 | 285 | 468 | 19 | 203 | 7.46e-30 | 117 |
MS.gene25769.t1 | AT3G16690 | 42.958 | 142 | 78 | 2 | 11 | 151 | 8 | 147 | 8.37e-25 | 101 |
MS.gene25769.t1 | AT4G10160 | 35.417 | 144 | 84 | 3 | 276 | 419 | 10 | 144 | 1.97e-20 | 90.1 |
MS.gene25769.t1 | AT1G04360 | 36.129 | 155 | 88 | 5 | 267 | 417 | 32 | 179 | 7.26e-15 | 76.6 |
MS.gene25769.t1 | AT2G47560 | 42.169 | 83 | 45 | 1 | 340 | 419 | 73 | 155 | 2.53e-14 | 72.8 |
MS.gene25769.t1 | AT5G53110 | 31.429 | 140 | 92 | 2 | 278 | 414 | 234 | 372 | 4.60e-14 | 73.9 |
MS.gene25769.t1 | AT1G23980 | 30.890 | 191 | 108 | 5 | 258 | 427 | 12 | 199 | 5.47e-14 | 73.9 |
MS.gene25769.t1 | AT2G35910 | 40.541 | 74 | 43 | 1 | 348 | 420 | 122 | 195 | 7.04e-14 | 71.2 |
MS.gene25769.t1 | AT1G72200 | 31.013 | 158 | 83 | 7 | 298 | 442 | 69 | 213 | 8.90e-14 | 73.6 |
MS.gene25769.t1 | AT2G35000 | 36.364 | 132 | 70 | 3 | 296 | 418 | 55 | 181 | 9.61e-14 | 73.2 |
MS.gene25769.t1 | AT2G27940 | 33.077 | 130 | 71 | 4 | 314 | 443 | 89 | 202 | 1.72e-13 | 70.5 |
MS.gene25769.t1 | AT5G57750 | 40.741 | 81 | 46 | 1 | 336 | 414 | 84 | 164 | 3.55e-13 | 68.9 |
MS.gene25769.t1 | AT5G41440 | 46.429 | 56 | 29 | 1 | 363 | 417 | 68 | 123 | 4.78e-13 | 66.2 |
MS.gene25769.t1 | AT3G48030 | 30.769 | 221 | 122 | 9 | 221 | 417 | 39 | 252 | 4.81e-13 | 70.9 |
MS.gene25769.t1 | AT5G43420 | 54.902 | 51 | 23 | 0 | 367 | 417 | 133 | 183 | 4.94e-13 | 70.9 |
MS.gene25769.t1 | AT3G16720 | 34.646 | 127 | 79 | 3 | 344 | 469 | 93 | 216 | 5.38e-13 | 70.1 |
MS.gene25769.t1 | AT5G40250 | 46.970 | 66 | 35 | 0 | 372 | 437 | 143 | 208 | 6.06e-13 | 70.5 |
MS.gene25769.t1 | AT4G15975 | 45.070 | 71 | 39 | 0 | 372 | 442 | 76 | 146 | 6.08e-13 | 68.9 |
MS.gene25769.t1 | AT3G05200 | 26.994 | 163 | 99 | 5 | 268 | 423 | 30 | 179 | 6.96e-13 | 70.5 |
MS.gene25769.t1 | AT5G07040 | 34.177 | 79 | 49 | 1 | 345 | 420 | 64 | 142 | 9.05e-13 | 66.6 |
MS.gene25769.t1 | AT4G40070 | 31.298 | 131 | 80 | 4 | 301 | 423 | 47 | 175 | 1.30e-12 | 68.9 |
MS.gene25769.t1 | AT4G09100 | 38.095 | 84 | 46 | 2 | 342 | 419 | 49 | 132 | 1.43e-12 | 65.1 |
MS.gene25769.t1 | AT1G22500 | 58.333 | 48 | 20 | 0 | 372 | 419 | 118 | 165 | 2.58e-12 | 68.6 |
MS.gene25769.t1 | AT5G10380 | 36.735 | 98 | 46 | 2 | 372 | 469 | 135 | 216 | 3.17e-12 | 67.8 |
MS.gene25769.t1 | AT3G48030 | 36.923 | 130 | 61 | 6 | 302 | 417 | 52 | 174 | 3.59e-12 | 67.0 |
MS.gene25769.t1 | AT2G34990 | 39.362 | 94 | 49 | 3 | 344 | 431 | 88 | 179 | 3.72e-12 | 67.8 |
MS.gene25769.t1 | AT3G62690 | 43.662 | 71 | 39 | 1 | 372 | 442 | 113 | 182 | 4.25e-12 | 66.6 |
MS.gene25769.t1 | AT2G34990 | 39.362 | 94 | 49 | 3 | 344 | 431 | 66 | 157 | 4.46e-12 | 67.4 |
MS.gene25769.t1 | AT2G42360 | 31.507 | 146 | 87 | 5 | 277 | 419 | 20 | 155 | 5.68e-12 | 65.9 |
MS.gene25769.t1 | AT5G47610 | 41.270 | 63 | 35 | 1 | 357 | 417 | 90 | 152 | 1.07e-11 | 63.5 |
MS.gene25769.t1 | AT4G17905 | 51.923 | 52 | 25 | 0 | 372 | 423 | 155 | 206 | 1.10e-11 | 66.2 |
MS.gene25769.t1 | AT4G17905 | 51.923 | 52 | 25 | 0 | 372 | 423 | 181 | 232 | 1.12e-11 | 66.2 |
MS.gene25769.t1 | AT1G49230 | 38.272 | 81 | 49 | 1 | 364 | 444 | 123 | 202 | 1.45e-11 | 64.3 |
MS.gene25769.t1 | AT3G61550 | 43.103 | 58 | 33 | 0 | 363 | 420 | 127 | 184 | 1.75e-11 | 63.9 |
MS.gene25769.t1 | AT5G27420 | 28.966 | 145 | 90 | 5 | 277 | 417 | 34 | 169 | 1.96e-11 | 65.9 |
MS.gene25769.t1 | AT4G30400 | 60.465 | 43 | 17 | 0 | 372 | 414 | 134 | 176 | 2.12e-11 | 66.2 |
MS.gene25769.t1 | AT3G10910 | 40.541 | 74 | 39 | 2 | 348 | 418 | 89 | 160 | 2.56e-11 | 62.8 |
MS.gene25769.t1 | AT2G18650 | 47.273 | 55 | 29 | 0 | 372 | 426 | 126 | 180 | 2.71e-11 | 65.9 |
MS.gene25769.t1 | AT5G05810 | 52.083 | 48 | 23 | 0 | 372 | 419 | 146 | 193 | 2.83e-11 | 65.5 |
MS.gene25769.t1 | AT2G42350 | 44.828 | 58 | 31 | 1 | 372 | 429 | 100 | 156 | 3.04e-11 | 63.5 |
MS.gene25769.t1 | AT1G80400 | 31.707 | 123 | 67 | 5 | 296 | 414 | 287 | 396 | 4.26e-11 | 65.1 |
MS.gene25769.t1 | AT5G66070 | 40.299 | 67 | 39 | 1 | 348 | 414 | 153 | 218 | 4.45e-11 | 63.2 |
MS.gene25769.t1 | AT5G66070 | 40.299 | 67 | 39 | 1 | 348 | 414 | 153 | 218 | 4.45e-11 | 63.2 |
MS.gene25769.t1 | AT4G28890 | 32.787 | 122 | 79 | 2 | 296 | 414 | 44 | 165 | 4.79e-11 | 65.1 |
MS.gene25769.t1 | AT5G17600 | 44.776 | 67 | 33 | 1 | 370 | 436 | 140 | 202 | 5.03e-11 | 64.7 |
MS.gene25769.t1 | AT1G35330 | 54.167 | 48 | 22 | 0 | 372 | 419 | 129 | 176 | 5.07e-11 | 64.3 |
MS.gene25769.t1 | AT4G35840 | 35.211 | 71 | 42 | 1 | 348 | 414 | 163 | 233 | 5.14e-11 | 63.2 |
MS.gene25769.t1 | AT4G26400 | 40.000 | 80 | 42 | 2 | 351 | 430 | 225 | 298 | 6.05e-11 | 64.3 |
MS.gene25769.t1 | AT4G26400 | 40.000 | 80 | 42 | 2 | 351 | 430 | 225 | 298 | 6.05e-11 | 64.3 |
MS.gene25769.t1 | AT3G03550 | 53.061 | 49 | 23 | 0 | 370 | 418 | 157 | 205 | 6.05e-11 | 64.3 |
MS.gene25769.t1 | AT5G66070 | 40.299 | 67 | 39 | 1 | 348 | 414 | 177 | 242 | 7.71e-11 | 62.8 |
MS.gene25769.t1 | AT3G43430 | 38.806 | 67 | 32 | 1 | 367 | 424 | 78 | 144 | 8.37e-11 | 61.2 |
MS.gene25769.t1 | AT2G46160 | 35.714 | 84 | 45 | 1 | 348 | 422 | 105 | 188 | 8.51e-11 | 62.0 |
MS.gene25769.t1 | AT2G46160 | 35.714 | 84 | 45 | 1 | 348 | 422 | 105 | 188 | 8.51e-11 | 62.0 |
Find 106 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACCAAGATGCTATCAATT+TGG | 0.243078 | 3.2:+70981875 | MS.gene25769:CDS |
CATTTGGAAACGGTGTTTCT+TGG | 0.259955 | 3.2:+70975901 | MS.gene25769:CDS |
TCTGATATAATAATATTAAT+AGG | 0.260444 | 3.2:-70981846 | None:intergenic |
ATATGCATGCTCTTTAATAT+TGG | 0.289240 | 3.2:+70975680 | MS.gene25769:CDS |
TCCTTGCTGCTATCTGCTCT+TGG | 0.294814 | 3.2:-70976135 | None:intergenic |
TTCCTATCTTTAGCTTCATT+TGG | 0.307672 | 3.2:+70975885 | MS.gene25769:CDS |
TGATCTGGCAATGATGAATT+TGG | 0.308427 | 3.2:-70981909 | None:intergenic |
CTGATATAATAATATTAATA+GGG | 0.324452 | 3.2:-70981845 | None:intergenic |
AAACAGATGTTGTGTTTGTT+TGG | 0.326329 | 3.2:+70981665 | MS.gene25769:intron |
GGATTTGACCGTGCAATTCT+TGG | 0.331873 | 3.2:+70980795 | MS.gene25769:CDS |
AAAAGGGATGAGCGCATAAA+TGG | 0.341443 | 3.2:-70975925 | None:intergenic |
TGCTTCACCTTTGTCTATCA+TGG | 0.349245 | 3.2:+70975709 | MS.gene25769:CDS |
AGTCTTCCTTGGTTTACTCT+TGG | 0.378667 | 3.2:+70975574 | MS.gene25769:CDS |
CCTTGCTGCTATCTGCTCTT+GGG | 0.380467 | 3.2:-70976134 | None:intergenic |
TGGAACACATGTTTGCAATA+TGG | 0.387541 | 3.2:-70981723 | None:intergenic |
TGTTTGTTTGGGAGAATTTG+AGG | 0.394413 | 3.2:+70981677 | MS.gene25769:CDS |
AACAGCAGAACGTTTGTTAA+CGG | 0.401198 | 3.2:-70975648 | None:intergenic |
AACATTGTCCCAATCCCATT+TGG | 0.407143 | 3.2:-70976067 | None:intergenic |
TGTTTCCTTACCGCAATGAA+TGG | 0.413782 | 3.2:-70975951 | None:intergenic |
CGTTGATGAACTGCATGGTT+TGG | 0.424939 | 3.2:+70975420 | MS.gene25769:CDS |
TTATGCAGGCCAACATTTGT+TGG | 0.425386 | 3.2:+70975344 | MS.gene25769:intron |
TATCTCAATCAGATACCAAA+TGG | 0.427186 | 3.2:+70976052 | MS.gene25769:intron |
AACAAACGTTCTGCTGTTGT+TGG | 0.429590 | 3.2:+70975653 | MS.gene25769:CDS |
AAGAGGCTCAAAGTCTTCCT+TGG | 0.429746 | 3.2:+70975563 | MS.gene25769:CDS |
AACAGATGTTGTGTTTGTTT+GGG | 0.430727 | 3.2:+70981666 | MS.gene25769:intron |
ATAGCAGCAAGGAAGAATAA+TGG | 0.431178 | 3.2:+70976145 | MS.gene25769:CDS |
TTTGTTGGAATATGCAAGAA+AGG | 0.432088 | 3.2:+70975359 | MS.gene25769:CDS |
GAGGAAGCACCAGCTTGATC+TGG | 0.436281 | 3.2:-70981924 | None:intergenic |
CACACATCCTGCACCATTGA+TGG | 0.437454 | 3.2:-70975492 | None:intergenic |
TTCCCTTGACATGATATTTG+AGG | 0.439928 | 3.2:-70981943 | None:intergenic |
CGAACAGTAGTGGGTATCAT+AGG | 0.440064 | 3.2:+70974989 | MS.gene25769:CDS |
TGCATGGTTTGGACTCTCTA+CGG | 0.441220 | 3.2:+70975431 | MS.gene25769:CDS |
ACAAACGTTCTGCTGTTGTT+GGG | 0.444778 | 3.2:+70975654 | MS.gene25769:CDS |
TTCCTTGTGGTGACCATCAA+TGG | 0.447143 | 3.2:+70975479 | MS.gene25769:CDS |
ACCGCAATGAATGGGTCAAA+AGG | 0.452161 | 3.2:-70975942 | None:intergenic |
AATCAGATACCAAATGGGAT+TGG | 0.454981 | 3.2:+70976058 | MS.gene25769:intron |
ATCAGATACCAAATGGGATT+GGG | 0.459053 | 3.2:+70976059 | MS.gene25769:intron |
GGAGGAGAACTTGAAATTTG+TGG | 0.462743 | 3.2:-70980400 | None:intergenic |
AATATTAAAGAGCATGCATA+TGG | 0.469160 | 3.2:-70975678 | None:intergenic |
TTCCAAATGAAGCTAAAGAT+AGG | 0.471616 | 3.2:-70975887 | None:intergenic |
TTGCATATTCCAACAAATGT+TGG | 0.471666 | 3.2:-70975353 | None:intergenic |
TTTGGGAGAATTTGAGGTGA+AGG | 0.480510 | 3.2:+70981683 | MS.gene25769:CDS |
ATATATGAGGCAGTGGCAAA+AGG | 0.487236 | 3.2:+70980328 | MS.gene25769:intron |
GCAAGGAAGAATAATGGAAA+AGG | 0.488542 | 3.2:+70976151 | MS.gene25769:CDS |
GTTGGAGGAATATTGATCCT+TGG | 0.489471 | 3.2:-70980577 | None:intergenic |
TCTTTAGCTTCATTTGGAAA+CGG | 0.490245 | 3.2:+70975891 | MS.gene25769:CDS |
AGAAATTGCTCGAACAGTAG+TGG | 0.495158 | 3.2:+70974979 | MS.gene25769:CDS |
GTTTCCTTACCGCAATGAAT+GGG | 0.497693 | 3.2:-70975950 | None:intergenic |
TCTCTCCACACTTACTTCCA+AGG | 0.498222 | 3.2:+70980560 | MS.gene25769:CDS |
TGATGAGGATTTACAAGCAA+GGG | 0.506166 | 3.2:+70980840 | MS.gene25769:CDS |
GCATGGTTTGGACTCTCTAC+GGG | 0.509664 | 3.2:+70975432 | MS.gene25769:CDS |
AATCTCATAGCCTCGTCGAT+TGG | 0.509860 | 3.2:+70980774 | MS.gene25769:intron |
GAATAATAACGATAGGTAGT+TGG | 0.510389 | 3.2:-70980595 | None:intergenic |
TACATATGTGGAAGAGTAGG+AGG | 0.515916 | 3.2:-70980418 | None:intergenic |
GGCAATGATGAATTTGGTAA+TGG | 0.517622 | 3.2:-70981903 | None:intergenic |
GAATTGAGAATATGAAAGCT+TGG | 0.520047 | 3.2:-70980468 | None:intergenic |
AAACTGTGAGGGTGCACCAT+TGG | 0.523843 | 3.2:-70975458 | None:intergenic |
CAACGTGGCTAGGTATGGTA+CGG | 0.525635 | 3.2:-70975402 | None:intergenic |
TTCATCAACGTGGCTAGGTA+TGG | 0.527477 | 3.2:-70975407 | None:intergenic |
AATCCAAATTGATAGCATCT+TGG | 0.528270 | 3.2:-70981878 | None:intergenic |
ACATTGATTGCATACATCAC+TGG | 0.532576 | 3.2:+70981745 | MS.gene25769:CDS |
CCGCAATGAATGGGTCAAAA+GGG | 0.533348 | 3.2:-70975941 | None:intergenic |
CGGATGCATGTTCTTGTCTC+CGG | 0.538109 | 3.2:+70975223 | MS.gene25769:CDS |
ATCTCAATCAGATACCAAAT+GGG | 0.541436 | 3.2:+70976053 | MS.gene25769:intron |
TGATATAATAATATTAATAG+GGG | 0.542049 | 3.2:-70981844 | None:intergenic |
GACTCTCTACGGGTTACCAA+TGG | 0.543382 | 3.2:+70975442 | MS.gene25769:CDS |
AGTTCTTCTGAATACATATG+TGG | 0.547197 | 3.2:-70980430 | None:intergenic |
AAGAAGAAGCTCTTCTCTTG+AGG | 0.557389 | 3.2:-70980537 | None:intergenic |
TCCTCATCAAACAAAACTCT+AGG | 0.558271 | 3.2:-70980826 | None:intergenic |
TTGATAGCATCTTGGTGAGG+TGG | 0.563465 | 3.2:-70981870 | None:intergenic |
AATCTGTCAGAAGTGGTAGT+TGG | 0.565227 | 3.2:+70976181 | MS.gene25769:CDS |
TGATAGCATCTTGGTGAGGT+GGG | 0.565389 | 3.2:-70981869 | None:intergenic |
GAATACATATGTGGAAGAGT+AGG | 0.569152 | 3.2:-70980421 | None:intergenic |
TAATAACGATAGGTAGTTGG+AGG | 0.570622 | 3.2:-70980592 | None:intergenic |
ACCACAGGAAATGTCATCGC+CGG | 0.571722 | 3.2:+70975203 | MS.gene25769:intron |
GTGGTGACCATCAATGGTGC+AGG | 0.573604 | 3.2:+70975485 | MS.gene25769:CDS |
CTTCCTCAAATATCATGTCA+AGG | 0.573766 | 3.2:+70981940 | MS.gene25769:CDS |
GAAATTGCTCGAACAGTAGT+GGG | 0.576969 | 3.2:+70974980 | MS.gene25769:CDS |
TCAATGAAATAAATGAGAGA+AGG | 0.580735 | 3.2:-70975613 | None:intergenic |
CGGAGACAAGAACATGCATC+CGG | 0.583108 | 3.2:-70975222 | None:intergenic |
TTGATCCTTGGAAGTAAGTG+TGG | 0.583511 | 3.2:-70980565 | None:intergenic |
AACGTGGCTAGGTATGGTAC+GGG | 0.585953 | 3.2:-70975401 | None:intergenic |
AGAGATGAATCTGTCAGAAG+TGG | 0.596826 | 3.2:+70976174 | MS.gene25769:CDS |
GGAAGATGAATAATAACGAT+AGG | 0.599411 | 3.2:-70980602 | None:intergenic |
TCATCATTGCCAGATCAAGC+TGG | 0.602782 | 3.2:+70981915 | MS.gene25769:CDS |
CACCATTGATGGTCACCACA+AGG | 0.603803 | 3.2:-70975481 | None:intergenic |
TTCCTCAAATATCATGTCAA+GGG | 0.604222 | 3.2:+70981941 | MS.gene25769:CDS |
TGCAGTTCATCAACGTGGCT+AGG | 0.615839 | 3.2:-70975412 | None:intergenic |
TTGATGAGGATTTACAAGCA+AGG | 0.628964 | 3.2:+70980839 | MS.gene25769:CDS |
AAGTTTGTCCAAGAATTGCA+CGG | 0.632719 | 3.2:-70980803 | None:intergenic |
AATATGCAAGAAAGGATCAG+TGG | 0.634670 | 3.2:+70975367 | MS.gene25769:CDS |
CATCAATGGTGCAGGATGTG+TGG | 0.640468 | 3.2:+70975493 | MS.gene25769:CDS |
GTACTAACCATGATAGACAA+AGG | 0.643828 | 3.2:-70975716 | None:intergenic |
GCACCCTCACAGTTTCCTTG+TGG | 0.646427 | 3.2:+70975466 | MS.gene25769:CDS |
ATGATGGAACATCTACAAAG+TGG | 0.651244 | 3.2:-70981789 | None:intergenic |
CCCAAGAGCAGATAGCAGCA+AGG | 0.662604 | 3.2:+70976134 | MS.gene25769:CDS |
AGCCACGTTGATGAACTGCA+TGG | 0.673870 | 3.2:+70975415 | MS.gene25769:CDS |
GATATAATAATATTAATAGG+GGG | 0.686692 | 3.2:-70981843 | None:intergenic |
TCACCACAAGGAAACTGTGA+GGG | 0.692337 | 3.2:-70975469 | None:intergenic |
GTCACCACAAGGAAACTGTG+AGG | 0.716066 | 3.2:-70975470 | None:intergenic |
TAAGCTCCAAGAGTAAACCA+AGG | 0.717292 | 3.2:-70975580 | None:intergenic |
GATTGGGACAATGTTTGCAG+TGG | 0.718991 | 3.2:+70976075 | MS.gene25769:CDS |
AAATTGATAGCATCTTGGTG+AGG | 0.719635 | 3.2:-70981873 | None:intergenic |
AACCATGCAGTTCATCAACG+TGG | 0.729957 | 3.2:-70975417 | None:intergenic |
ACGGTCAAATCCAATCGACG+AGG | 0.761129 | 3.2:-70980784 | None:intergenic |
AGTGATGTATGCAATCAATG+TGG | 0.766710 | 3.2:-70981743 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 70974968 | 70981968 | 70974968 | ID=MS.gene25769 |
chr3.2 | mRNA | 70974968 | 70981968 | 70974968 | ID=MS.gene25769.t1;Parent=MS.gene25769 |
chr3.2 | exon | 70974968 | 70975010 | 70974968 | ID=MS.gene25769.t1.exon1;Parent=MS.gene25769.t1 |
chr3.2 | CDS | 70974968 | 70975010 | 70974968 | ID=cds.MS.gene25769.t1;Parent=MS.gene25769.t1 |
chr3.2 | exon | 70975210 | 70975246 | 70975210 | ID=MS.gene25769.t1.exon2;Parent=MS.gene25769.t1 |
chr3.2 | CDS | 70975210 | 70975246 | 70975210 | ID=cds.MS.gene25769.t1;Parent=MS.gene25769.t1 |
chr3.2 | exon | 70975352 | 70975730 | 70975352 | ID=MS.gene25769.t1.exon3;Parent=MS.gene25769.t1 |
chr3.2 | CDS | 70975352 | 70975730 | 70975352 | ID=cds.MS.gene25769.t1;Parent=MS.gene25769.t1 |
chr3.2 | exon | 70975843 | 70975962 | 70975843 | ID=MS.gene25769.t1.exon4;Parent=MS.gene25769.t1 |
chr3.2 | CDS | 70975843 | 70975962 | 70975843 | ID=cds.MS.gene25769.t1;Parent=MS.gene25769.t1 |
chr3.2 | exon | 70976064 | 70976219 | 70976064 | ID=MS.gene25769.t1.exon5;Parent=MS.gene25769.t1 |
chr3.2 | CDS | 70976064 | 70976219 | 70976064 | ID=cds.MS.gene25769.t1;Parent=MS.gene25769.t1 |
chr3.2 | exon | 70980337 | 70980627 | 70980337 | ID=MS.gene25769.t1.exon6;Parent=MS.gene25769.t1 |
chr3.2 | CDS | 70980337 | 70980627 | 70980337 | ID=cds.MS.gene25769.t1;Parent=MS.gene25769.t1 |
chr3.2 | exon | 70980784 | 70980869 | 70980784 | ID=MS.gene25769.t1.exon7;Parent=MS.gene25769.t1 |
chr3.2 | CDS | 70980784 | 70980869 | 70980784 | ID=cds.MS.gene25769.t1;Parent=MS.gene25769.t1 |
chr3.2 | exon | 70981671 | 70981968 | 70981671 | ID=MS.gene25769.t1.exon8;Parent=MS.gene25769.t1 |
chr3.2 | CDS | 70981671 | 70981968 | 70981671 | ID=cds.MS.gene25769.t1;Parent=MS.gene25769.t1 |
Gene Sequence |
Protein sequence |