AlfalfaGEDB | MS.gene29109

M. sativa cultivar XinJiangDaYe / MS.gene29109

KEGG: -
GO: -
PFAM: PF07800.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29109.t1	XP_003601118.1	97.5	284	7	0	1	284	30	313	2.50E-157	564.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29109.t1	G7J3N5	97.5	284	7	0	1	284	30	313	1.8e-157	564.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049166	MS.gene29109	0.809527	1.81E-50	-1.69E-46
MS.gene049283	MS.gene29109	0.841526	4.50E-58	-1.69E-46
MS.gene049674	MS.gene29109	0.805583	1.24E-49	-1.69E-46
MS.gene050084	MS.gene29109	0.845654	3.55E-59	-1.69E-46
MS.gene050085	MS.gene29109	0.859972	2.86E-63	-1.69E-46
MS.gene050114	MS.gene29109	0.832038	1.19E-55	-1.69E-46
MS.gene050116	MS.gene29109	0.802705	4.94E-49	-1.69E-46
MS.gene050317	MS.gene29109	0.809875	1.52E-50	-1.69E-46
MS.gene050359	MS.gene29109	0.869543	2.86E-66	-1.69E-46
MS.gene050384	MS.gene29109	0.812648	3.81E-51	-1.69E-46
MS.gene050386	MS.gene29109	0.83641	9.51E-57	-1.69E-46
MS.gene050646	MS.gene29109	0.822828	1.92E-53	-1.69E-46
MS.gene050654	MS.gene29109	0.846696	1.85E-59	-1.69E-46
MS.gene050752	MS.gene29109	0.806767	7.01E-50	-1.69E-46
MS.gene050838	MS.gene29109	0.826352	2.84E-54	-1.69E-46
MS.gene050945	MS.gene29109	0.819985	8.71E-53	-1.69E-46
MS.gene051003	MS.gene29109	0.858435	8.26E-63	-1.69E-46
MS.gene051184	MS.gene29109	0.813454	2.54E-51	-1.69E-46
MS.gene051233	MS.gene29109	0.811362	7.27E-51	-1.69E-46
MS.gene051234	MS.gene29109	0.805493	1.30E-49	-1.69E-46
MS.gene051343	MS.gene29109	0.872557	2.90E-67	-1.69E-46
MS.gene051381	MS.gene29109	0.81499	1.16E-51	-1.69E-46
MS.gene051597	MS.gene29109	0.81601	6.89E-52	-1.69E-46
MS.gene051831	MS.gene29109	0.803515	3.36E-49	-1.69E-46
MS.gene051975	MS.gene29109	0.817128	3.87E-52	-1.69E-46
MS.gene052242	MS.gene29109	-0.857801	1.27E-62	-1.69E-46
MS.gene052342	MS.gene29109	0.817932	2.55E-52	-1.69E-46
MS.gene052434	MS.gene29109	0.827623	1.41E-54	-1.69E-46
MS.gene052932	MS.gene29109	0.820564	6.42E-53	-1.69E-46
MS.gene053058	MS.gene29109	0.899503	1.86E-77	-1.69E-46
MS.gene053167	MS.gene29109	0.830468	2.89E-55	-1.69E-46
MS.gene053564	MS.gene29109	0.838721	2.43E-57	-1.69E-46
MS.gene053726	MS.gene29109	0.818104	2.33E-52	-1.69E-46
MS.gene054403	MS.gene29109	0.805374	1.38E-49	-1.69E-46
MS.gene055311	MS.gene29109	0.81972	1.00E-52	-1.69E-46
MS.gene055513	MS.gene29109	0.816982	4.18E-52	-1.69E-46
MS.gene056045	MS.gene29109	0.831944	1.25E-55	-1.69E-46
MS.gene056097	MS.gene29109	0.883915	3.00E-71	-1.69E-46
MS.gene05615	MS.gene29109	0.817902	2.59E-52	-1.69E-46
MS.gene056181	MS.gene29109	0.868521	6.14E-66	-1.69E-46
MS.gene056787	MS.gene29109	0.853938	1.72E-61	-1.69E-46
MS.gene056849	MS.gene29109	0.844728	6.32E-59	-1.69E-46
MS.gene056975	MS.gene29109	0.800623	1.32E-48	-1.69E-46
MS.gene056986	MS.gene29109	0.812304	4.53E-51	-1.69E-46
MS.gene056992	MS.gene29109	0.830723	2.50E-55	-1.69E-46
MS.gene057451	MS.gene29109	-0.805107	1.57E-49	-1.69E-46
MS.gene057452	MS.gene29109	-0.825874	3.70E-54	-1.69E-46
MS.gene057622	MS.gene29109	0.805286	1.44E-49	-1.69E-46
MS.gene05781	MS.gene29109	0.86265	4.36E-64	-1.69E-46
MS.gene057890	MS.gene29109	-0.802841	4.63E-49	-1.69E-46
MS.gene057999	MS.gene29109	0.819511	1.12E-52	-1.69E-46
MS.gene058054	MS.gene29109	0.84618	2.55E-59	-1.69E-46
MS.gene058055	MS.gene29109	0.809308	2.02E-50	-1.69E-46
MS.gene058126	MS.gene29109	0.818822	1.60E-52	-1.69E-46
MS.gene058638	MS.gene29109	0.819001	1.46E-52	-1.69E-46
MS.gene058639	MS.gene29109	0.818837	1.59E-52	-1.69E-46
MS.gene058758	MS.gene29109	0.820396	7.01E-53	-1.69E-46
MS.gene059007	MS.gene29109	0.872051	4.28E-67	-1.69E-46
MS.gene059146	MS.gene29109	0.85257	4.23E-61	-1.69E-46
MS.gene059360	MS.gene29109	0.816963	4.22E-52	-1.69E-46
MS.gene059965	MS.gene29109	0.811942	5.44E-51	-1.69E-46
MS.gene06010	MS.gene29109	0.814309	1.65E-51	-1.69E-46
MS.gene060296	MS.gene29109	0.83037	3.05E-55	-1.69E-46
MS.gene060563	MS.gene29109	0.8588	6.42E-63	-1.69E-46
MS.gene060933	MS.gene29109	0.802392	5.73E-49	-1.69E-46
MS.gene061006	MS.gene29109	0.817542	3.12E-52	-1.69E-46
MS.gene061100	MS.gene29109	0.802585	5.23E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29109.t1	MTR_3g073240	97.535	284	7	0	1	284	30	313	0.0	578
MS.gene29109.t1	MTR_4g094420	58.525	217	79	3	5	216	37	247	7.44e-84	256
MS.gene29109.t1	MTR_7g059110	43.750	224	83	2	19	201	24	245	1.03e-58	191
MS.gene29109.t1	MTR_4g113730	38.696	230	100	2	14	203	43	271	2.91e-49	167
MS.gene29109.t1	MTR_1g009790	43.169	183	98	2	16	198	23	199	8.61e-48	162
MS.gene29109.t1	MTR_8g085870	42.188	192	103	1	7	190	34	225	9.01e-48	165
MS.gene29109.t1	MTR_1g009790	43.169	183	98	2	16	198	23	199	1.85e-47	161
MS.gene29109.t1	MTR_7g059110	57.522	113	48	0	89	201	170	282	3.06e-38	139
MS.gene29109.t1	MTR_7g059110	46.591	88	41	2	19	100	24	111	5.19e-16	77.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29109.t1	AT4G08460	62.051	195	52	2	5	199	33	205	9.36e-84	253
MS.gene29109.t1	AT4G08460	62.051	195	52	2	5	199	33	205	9.36e-84	253
MS.gene29109.t1	AT4G08460	62.051	195	52	2	5	199	33	205	9.36e-84	253
MS.gene29109.t1	AT4G08460	62.051	195	52	2	5	199	33	205	9.36e-84	253
MS.gene29109.t1	AT1G77770	57.812	192	57	2	13	204	23	190	5.45e-73	225
MS.gene29109.t1	AT1G77770	57.812	192	57	2	13	204	23	190	7.48e-73	224
MS.gene29109.t1	AT1G77770	57.812	192	57	2	13	204	23	190	7.48e-73	224
MS.gene29109.t1	AT1G68140	54.639	194	73	2	8	201	42	220	2.46e-72	225
MS.gene29109.t1	AT1G68140	42.561	289	127	6	8	272	42	315	7.78e-69	217
MS.gene29109.t1	AT1G68140	42.561	289	127	6	8	272	42	315	7.78e-69	217
MS.gene29109.t1	AT1G68140	42.561	289	127	6	8	272	42	315	7.78e-69	217
MS.gene29109.t1	AT3G24740	40.359	223	99	3	14	202	19	241	7.09e-54	179
MS.gene29109.t1	AT3G24740	40.359	223	99	3	14	202	19	241	7.09e-54	179
MS.gene29109.t1	AT3G24740	40.359	223	99	3	14	202	19	241	7.09e-54	179
MS.gene29109.t1	AT3G24740	40.359	223	99	3	14	202	19	241	7.09e-54	179
MS.gene29109.t1	AT3G24740	40.359	223	99	3	14	202	19	241	7.09e-54	179
MS.gene29109.t1	AT3G24740	40.359	223	99	3	14	202	19	241	7.09e-54	179
MS.gene29109.t1	AT4G31410	40.092	217	108	5	15	228	28	225	4.15e-47	160
MS.gene29109.t1	AT4G31410	40.092	217	108	5	15	228	28	225	4.15e-47	160
MS.gene29109.t1	AT4G31410	40.092	217	108	5	15	228	28	225	4.15e-47	160
MS.gene29109.t1	AT3G25910	36.325	234	96	2	14	194	36	269	1.12e-43	152
MS.gene29109.t1	AT1G80220	31.200	250	138	5	4	252	30	246	7.34e-34	124
MS.gene29109.t1	AT1G15430	34.426	183	93	2	2	181	31	189	8.49e-33	121
MS.gene29109.t1	AT1G15430	34.426	183	93	2	2	181	31	189	8.49e-33	121
MS.gene29109.t1	AT2G26050	32.624	141	70	2	41	180	38	154	1.65e-20	87.8

Find 70 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACAGGTTCTGCTGCTCTTTC+TGG	0.086227	3.2:-66025325	MS.gene29109:CDS
ACTGATTCTGATGATGAATT+TGG	0.163731	3.2:-66025463	MS.gene29109:CDS
CTATGCCTCCGTCGTCTTCT+AGG	0.214329	3.2:+66025271	None:intergenic
AACTCCAGGGGCTATGGTAC+TGG	0.215833	3.2:-66025533	MS.gene29109:CDS
CGGCTAGTAGCACACATATA+AGG	0.248105	3.2:+66025955	None:intergenic
TCTTGCCATTCAGAGACTTC+CGG	0.294090	3.2:+66025737	None:intergenic
TTCTTCGGCTCCATTGGTTT+GGG	0.298539	3.2:-66025424	MS.gene29109:CDS
CTTGCCATTCAGAGACTTCC+GGG	0.300913	3.2:+66025738	None:intergenic
TTTCTTCGGCTCCATTGGTT+TGG	0.320053	3.2:-66025425	MS.gene29109:CDS
CTGATTCTGATGATGAATTT+GGG	0.329708	3.2:-66025462	MS.gene29109:CDS
GTGGTACTGGCAGCTTTATC+AGG	0.366519	3.2:-66025402	MS.gene29109:CDS
CTTTCACCTGTCGGCGGCAA+AGG	0.373229	3.2:+66025782	None:intergenic
TCCATTGGTTTGGGTGGTAC+TGG	0.373732	3.2:-66025415	MS.gene29109:CDS
CTGTATAATCCACGGTCATT+TGG	0.390948	3.2:+66025493	None:intergenic
GTCTTCAACTCCAGGGGCTA+TGG	0.399273	3.2:-66025539	MS.gene29109:CDS
GGTGATTTCTTCGGCTCCAT+TGG	0.401886	3.2:-66025430	MS.gene29109:CDS
GGCTAGTAGCACACATATAA+GGG	0.411650	3.2:+66025956	None:intergenic
TTTCGGAGTGTTGCATCTAC+AGG	0.416952	3.2:-66025343	MS.gene29109:CDS
TTTCACCTGTCGGCGGCAAA+GGG	0.426605	3.2:+66025783	None:intergenic
GAGGATGATGGTGATTTCTT+CGG	0.432897	3.2:-66025439	MS.gene29109:CDS
TTGTCCCCTTTGCCGCCGAC+AGG	0.433551	3.2:-66025788	MS.gene29109:CDS
ACTCCAGGGGCTATGGTACT+GGG	0.435014	3.2:-66025532	MS.gene29109:CDS
TGCTACCTGCTCAGTCTGTA+TGG	0.441789	3.2:-66026034	MS.gene29109:CDS
CGGGGAGTTACAAGGAGCTT+AGG	0.444681	3.2:-66025681	MS.gene29109:CDS
CCAAAGTCATCGACATCAAA+AGG	0.453118	3.2:+66025367	None:intergenic
ACTTCTCGTGGTCGCGAACA+TGG	0.461952	3.2:+66025637	None:intergenic
GAGGAGTAGGATAGCATTGT+GGG	0.468661	3.2:+66026005	None:intergenic
AAGCGGTAGAAAAGAAAGAT+TGG	0.472915	3.2:-66026062	MS.gene29109:CDS
CAAAGGGGACAAAGAAGCTC+AGG	0.485626	3.2:+66025799	None:intergenic
TCTGCTGCTCTTTCTGGACG+TGG	0.489978	3.2:-66025319	MS.gene29109:CDS
CTAGAAGACGACGGAGGCAT+AGG	0.517476	3.2:-66025270	MS.gene29109:CDS
CTTTGCCGCCGACAGGTGAA+AGG	0.519049	3.2:-66025781	MS.gene29109:CDS
ATGTTCGCGACCACGAGAAG+TGG	0.522683	3.2:-66025635	MS.gene29109:CDS
TTCGGCTCCATTGGTTTGGG+TGG	0.524118	3.2:-66025421	MS.gene29109:CDS
AGGCATAGGGTACTGAATGC+TGG	0.551130	3.2:-66025256	MS.gene29109:CDS
CCTCTGTTCATCGTATAACA+AGG	0.553685	3.2:-66025986	MS.gene29109:CDS
TTTCTGGACGTGGATTCCAC+AGG	0.555472	3.2:-66025309	MS.gene29109:CDS
TAGAAGACGACGGAGGCATA+GGG	0.563527	3.2:-66025269	MS.gene29109:CDS
GGACTGTGGTTGAAGCAGCC+CGG	0.563979	3.2:-66025756	MS.gene29109:CDS
GATGAATTTGGGGAGGATGA+TGG	0.566776	3.2:-66025451	MS.gene29109:CDS
AATTCGAGTGTGAAAGAGAA+CGG	0.568336	3.2:-66025585	MS.gene29109:CDS
GCCGCCGACAGGTGAAAGGT+TGG	0.568951	3.2:-66025777	MS.gene29109:CDS
GCCAGTACCACCCAAACCAA+TGG	0.572874	3.2:+66025414	None:intergenic
CTCCAGGGGCTATGGTACTG+GGG	0.573301	3.2:-66025531	MS.gene29109:CDS
TGGATTCCACAGGATACTGT+TGG	0.574386	3.2:-66025299	MS.gene29109:CDS
GTCTTTCCAACAGTATCCTG+TGG	0.591460	3.2:+66025293	None:intergenic
AGAGGAGTAGGATAGCATTG+TGG	0.593867	3.2:+66026004	None:intergenic
CAGTCCAACCTTTCACCTGT+CGG	0.596695	3.2:+66025773	None:intergenic
AACCTCCATACAGACTGAGC+AGG	0.601071	3.2:+66026029	None:intergenic
GCAGCCCGGAAGTCTCTGAA+TGG	0.601426	3.2:-66025742	MS.gene29109:CDS
AAAAGAAGCTGTATGCAAGA+TGG	0.602513	3.2:-66025715	MS.gene29109:CDS
TATACGATGAACAGAGGAGT+AGG	0.603641	3.2:+66025992	None:intergenic
TCCAGGGGCTATGGTACTGG+GGG	0.607557	3.2:-66025530	MS.gene29109:CDS
ATAGGGTACTGAATGCTGGC+CGG	0.616066	3.2:-66025252	MS.gene29109:CDS
CAAAACAGTTAGAATAGCGA+CGG	0.627893	3.2:+66025935	None:intergenic
TCCAACCTTTCACCTGTCGG+CGG	0.644382	3.2:+66025776	None:intergenic
TGATTCTGATGATGAATTTG+GGG	0.645133	3.2:-66025461	MS.gene29109:CDS
TACCTGCTCAGTCTGTATGG+AGG	0.645194	3.2:-66026031	MS.gene29109:CDS
CTCTGTTCATCGTATAACAA+GGG	0.645683	3.2:-66025985	MS.gene29109:CDS
CGTACAGGGTCCACTTCTCG+TGG	0.645791	3.2:+66025625	None:intergenic
TTCACCTGTCGGCGGCAAAG+GGG	0.648214	3.2:+66025784	None:intergenic
TTCTGATGATGAATTTGGGG+AGG	0.654732	3.2:-66025458	MS.gene29109:CDS
TTTCGTCGCTGTATAATCCA+CGG	0.656197	3.2:+66025485	None:intergenic
GTAGAAAAGAAAGATTGGAA+AGG	0.684023	3.2:-66026057	MS.gene29109:CDS
GTGCTCGAGCCAAATGACCG+TGG	0.685398	3.2:-66025502	MS.gene29109:CDS
CCTTGTTATACGATGAACAG+AGG	0.702851	3.2:+66025986	None:intergenic
TGGAAAGACCTAGAAGACGA+CGG	0.711922	3.2:-66025279	MS.gene29109:CDS
AGGAGTAGGATAGCATTGTG+GGG	0.724984	3.2:+66026006	None:intergenic
ACAGGTGAAAGGTTGGACTG+TGG	0.742392	3.2:-66025770	MS.gene29109:CDS
AAAGACCTAGAAGACGACGG+AGG	0.779006	3.2:-66025276	MS.gene29109:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CTGTTTTGAACAGTATAAAA+AGG	-	chr3.2:66025416-66025435	MS.gene29109:CDS	25.0%
!!!	TCGAATTTTGATTCTAATTC+TGG	-	chr3.2:66025489-66025508	MS.gene29109:CDS	25.0%
	GTAGAAAAGAAAGATTGGAA+AGG	-	chr3.2:66025279-66025298	MS.gene29109:CDS	30.0%
!	ACTGATTCTGATGATGAATT+TGG	-	chr3.2:66025873-66025892	MS.gene29109:CDS	30.0%
!	CTGATTCTGATGATGAATTT+GGG	-	chr3.2:66025874-66025893	MS.gene29109:CDS	30.0%
!	TGATTCTGATGATGAATTTG+GGG	-	chr3.2:66025875-66025894	MS.gene29109:CDS	30.0%
	AAAAGAAGCTGTATGCAAGA+TGG	-	chr3.2:66025621-66025640	MS.gene29109:CDS	35.0%
	AAGCGGTAGAAAAGAAAGAT+TGG	-	chr3.2:66025274-66025293	MS.gene29109:CDS	35.0%
	AATTCGAGTGTGAAAGAGAA+CGG	-	chr3.2:66025751-66025770	MS.gene29109:CDS	35.0%
	CAAAACAGTTAGAATAGCGA+CGG	+	chr3.2:66025404-66025423	None:intergenic	35.0%
	CTCTGTTCATCGTATAACAA+GGG	-	chr3.2:66025351-66025370	MS.gene29109:CDS	35.0%
!	AATTTTGTCTTCAACTCCAG+GGG	-	chr3.2:66025791-66025810	MS.gene29109:CDS	35.0%
!	ACAATTTTGTCTTCAACTCC+AGG	-	chr3.2:66025789-66025808	MS.gene29109:CDS	35.0%
!	CAATTTTGTCTTCAACTCCA+GGG	-	chr3.2:66025790-66025809	MS.gene29109:CDS	35.0%
!!	TCCATTTTTCTTCTCGTACA+GGG	+	chr3.2:66025728-66025747	None:intergenic	35.0%
!!	TGTCAAGAGGTTTTCTAAAG+CGG	-	chr3.2:66025257-66025276	MS.gene29109:CDS	35.0%
!!	TTCCATTTTTCTTCTCGTAC+AGG	+	chr3.2:66025729-66025748	None:intergenic	35.0%
!!!	ATGTCGATGACTTTGGTTTT+CGG	-	chr3.2:66025976-66025995	MS.gene29109:CDS	35.0%
	ACCCTGTACGAGAAGAAAAA+TGG	-	chr3.2:66025724-66025743	MS.gene29109:CDS	40.0%
	CCAAAGTCATCGACATCAAA+AGG	+	chr3.2:66025972-66025991	None:intergenic	40.0%
	CCTCTGTTCATCGTATAACA+AGG	-	chr3.2:66025350-66025369	MS.gene29109:CDS	40.0%
	CTGTATAATCCACGGTCATT+TGG	+	chr3.2:66025846-66025865	None:intergenic	40.0%
	GGCTAGTAGCACACATATAA+GGG	+	chr3.2:66025383-66025402	None:intergenic	40.0%
	TATACGATGAACAGAGGAGT+AGG	+	chr3.2:66025347-66025366	None:intergenic	40.0%
	TTTCGTCGCTGTATAATCCA+CGG	+	chr3.2:66025854-66025873	None:intergenic	40.0%
!	CCTTGTTATACGATGAACAG+AGG	+	chr3.2:66025353-66025372	None:intergenic	40.0%
!	CCTTTTGATGTCGATGACTT+TGG	-	chr3.2:66025969-66025988	MS.gene29109:CDS	40.0%
!	GAACTTTTGCATCGTCACTA+CGG	+	chr3.2:66025518-66025537	None:intergenic	40.0%
!	GAGGATGATGGTGATTTCTT+CGG	-	chr3.2:66025897-66025916	MS.gene29109:CDS	40.0%
!	TTCTGATGATGAATTTGGGG+AGG	-	chr3.2:66025878-66025897	MS.gene29109:CDS	40.0%
	AGAGGAGTAGGATAGCATTG+TGG	+	chr3.2:66025335-66025354	None:intergenic	45.0%
	AGGAGTAGGATAGCATTGTG+GGG	+	chr3.2:66025333-66025352	None:intergenic	45.0%
	CGGCTAGTAGCACACATATA+AGG	+	chr3.2:66025384-66025403	None:intergenic	45.0%
	GAGGAGTAGGATAGCATTGT+GGG	+	chr3.2:66025334-66025353	None:intergenic	45.0%
	GATGAATTTGGGGAGGATGA+TGG	-	chr3.2:66025885-66025904	MS.gene29109:CDS	45.0%
	GTCTTTCCAACAGTATCCTG+TGG	+	chr3.2:66026046-66026065	None:intergenic	45.0%
	TCTTGCCATTCAGAGACTTC+CGG	+	chr3.2:66025602-66025621	None:intergenic	45.0%
	TGGAAAGACCTAGAAGACGA+CGG	-	chr3.2:66026057-66026076	MS.gene29109:CDS	45.0%
	TGGATTCCACAGGATACTGT+TGG	-	chr3.2:66026037-66026056	MS.gene29109:CDS	45.0%
!	AAGATGGCTGTTCTTTTGCG+GGG	-	chr3.2:66025637-66025656	MS.gene29109:CDS	45.0%
!	CAAGATGGCTGTTCTTTTGC+GGG	-	chr3.2:66025636-66025655	MS.gene29109:CDS	45.0%
!	GCAAGATGGCTGTTCTTTTG+CGG	-	chr3.2:66025635-66025654	MS.gene29109:CDS	45.0%
!	TTCTTTTGCGGGGAGTTACA+AGG	-	chr3.2:66025647-66025666	MS.gene29109:CDS	45.0%
!	TTTCTTCGGCTCCATTGGTT+TGG	-	chr3.2:66025911-66025930	MS.gene29109:CDS	45.0%
!!	TTCTTCGGCTCCATTGGTTT+GGG	-	chr3.2:66025912-66025931	MS.gene29109:CDS	45.0%
!!	TTTCGGAGTGTTGCATCTAC+AGG	-	chr3.2:66025993-66026012	MS.gene29109:CDS	45.0%
	AAAGACCTAGAAGACGACGG+AGG	-	chr3.2:66026060-66026079	MS.gene29109:CDS	50.0%
	AACCTCCATACAGACTGAGC+AGG	+	chr3.2:66025310-66025329	None:intergenic	50.0%
	ACAGGTGAAAGGTTGGACTG+TGG	-	chr3.2:66025566-66025585	MS.gene29109:CDS	50.0%
	ACAGGTTCTGCTGCTCTTTC+TGG	-	chr3.2:66026011-66026030	MS.gene29109:CDS	50.0%
	CAAAGGGGACAAAGAAGCTC+AGG	+	chr3.2:66025540-66025559	None:intergenic	50.0%
	CAGTCCAACCTTTCACCTGT+CGG	+	chr3.2:66025566-66025585	None:intergenic	50.0%
	CTTGCCATTCAGAGACTTCC+GGG	+	chr3.2:66025601-66025620	None:intergenic	50.0%
	GGTGATTTCTTCGGCTCCAT+TGG	-	chr3.2:66025906-66025925	MS.gene29109:CDS	50.0%
	TACCTGCTCAGTCTGTATGG+AGG	-	chr3.2:66025305-66025324	MS.gene29109:CDS	50.0%
	TGCTACCTGCTCAGTCTGTA+TGG	-	chr3.2:66025302-66025321	MS.gene29109:CDS	50.0%
	TTTCTGGACGTGGATTCCAC+AGG	-	chr3.2:66026027-66026046	MS.gene29109:CDS	50.0%
!	TAGAAGACGACGGAGGCATA+GGG	-	chr3.2:66026067-66026086	MS.gene29109:CDS	50.0%
!!	AGGCATAGGGTACTGAATGC+TGG	-	chr3.2:66026080-66026099	MS.gene29109:CDS	50.0%
!!	ATAGGGTACTGAATGCTGGC+CGG	-	chr3.2:66026084-66026103	MS.gene29109:CDS	50.0%
!!	GTGGTACTGGCAGCTTTATC+AGG	-	chr3.2:66025934-66025953	MS.gene29109:CDS	50.0%
!!	TCCATTGGTTTGGGTGGTAC+TGG	-	chr3.2:66025921-66025940	MS.gene29109:CDS	50.0%
	AACTCCAGGGGCTATGGTAC+TGG	-	chr3.2:66025803-66025822	MS.gene29109:CDS	55.0%
	ACTCCAGGGGCTATGGTACT+GGG	-	chr3.2:66025804-66025823	MS.gene29109:CDS	55.0%
	ACTTCTCGTGGTCGCGAACA+TGG	+	chr3.2:66025702-66025721	None:intergenic	55.0%
	ATGTTCGCGACCACGAGAAG+TGG	-	chr3.2:66025701-66025720	MS.gene29109:CDS	55.0%
	CGGGGAGTTACAAGGAGCTT+AGG	-	chr3.2:66025655-66025674	MS.gene29109:CDS	55.0%
	CTATGCCTCCGTCGTCTTCT+AGG	+	chr3.2:66026068-66026087	None:intergenic	55.0%
	GCCAGTACCACCCAAACCAA+TGG	+	chr3.2:66025925-66025944	None:intergenic	55.0%
	GTCTTCAACTCCAGGGGCTA+TGG	-	chr3.2:66025797-66025816	MS.gene29109:CDS	55.0%
	TCCAACCTTTCACCTGTCGG+CGG	+	chr3.2:66025563-66025582	None:intergenic	55.0%
	TCTGCTGCTCTTTCTGGACG+TGG	-	chr3.2:66026017-66026036	MS.gene29109:CDS	55.0%
	TTTCACCTGTCGGCGGCAAA+GGG	+	chr3.2:66025556-66025575	None:intergenic	55.0%
!	CTAGAAGACGACGGAGGCAT+AGG	-	chr3.2:66026066-66026085	MS.gene29109:CDS	55.0%
!!	TTCGGCTCCATTGGTTTGGG+TGG	-	chr3.2:66025915-66025934	MS.gene29109:CDS	55.0%
	CGTACAGGGTCCACTTCTCG+TGG	+	chr3.2:66025714-66025733	None:intergenic	60.0%
	CTCCAGGGGCTATGGTACTG+GGG	-	chr3.2:66025805-66025824	MS.gene29109:CDS	60.0%
	CTTTCACCTGTCGGCGGCAA+AGG	+	chr3.2:66025557-66025576	None:intergenic	60.0%
	CTTTGCCGCCGACAGGTGAA+AGG	-	chr3.2:66025555-66025574	MS.gene29109:CDS	60.0%
	GCAGCCCGGAAGTCTCTGAA+TGG	-	chr3.2:66025594-66025613	MS.gene29109:CDS	60.0%
	GGACTGTGGTTGAAGCAGCC+CGG	-	chr3.2:66025580-66025599	MS.gene29109:CDS	60.0%
	GTGCTCGAGCCAAATGACCG+TGG	-	chr3.2:66025834-66025853	MS.gene29109:CDS	60.0%
	TTCACCTGTCGGCGGCAAAG+GGG	+	chr3.2:66025555-66025574	None:intergenic	60.0%
!	TCCAGGGGCTATGGTACTGG+GGG	-	chr3.2:66025806-66025825	MS.gene29109:CDS	60.0%
	GCCGCCGACAGGTGAAAGGT+TGG	-	chr3.2:66025559-66025578	MS.gene29109:CDS	65.0%
	TCCCCCAGTACCATAGCCCC+TGG	+	chr3.2:66025810-66025829	None:intergenic	65.0%
	TTGTCCCCTTTGCCGCCGAC+AGG	-	chr3.2:66025548-66025567	MS.gene29109:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	66025249	66026109	66025249	ID=MS.gene29109
chr3.2	mRNA	66025249	66026109	66025249	ID=MS.gene29109.t1;Parent=MS.gene29109
chr3.2	exon	66025249	66026109	66025249	ID=MS.gene29109.t1.exon1;Parent=MS.gene29109.t1
chr3.2	CDS	66025249	66026109	66025249	ID=cds.MS.gene29109.t1;Parent=MS.gene29109.t1

Gene Sequence

>MS.gene29109

ATGAAAAATGTCAAGAGGTTTTCTAAAGCGGTAGAAAAGAAAGATTGGAAAGGTGCTACCTGCTCAGTCTGTATGGAGGTTCCCCACAATGCTATCCTACTCCTCTGTTCATCGTATAACAAGGGCTGTCGCCCTTATATGTGTGCTACTAGCCGTCGCTATTCTAACTGTTTTGAACAGTATAAAAAGGCGTATACAAAAGCAACTTCTGTTCAAAGTTCGCAGCAAGAAACAGACTATTCGAATTTTGATTCTAATTCTGGCGACCGTAGTGACGATGCAAAAGTTCCTGAGCTTCTTTGTCCCCTTTGCCGCCGACAGGTGAAAGGTTGGACTGTGGTTGAAGCAGCCCGGAAGTCTCTGAATGGCAAGAAAAGAAGCTGTATGCAAGATGGCTGTTCTTTTGCGGGGAGTTACAAGGAGCTTAGGAAGCATGTTAGATCTAAGCATCCATGTTCGCGACCACGAGAAGTGGACCCTGTACGAGAAGAAAAATGGAAAAAATTCGAGTGTGAAAGAGAACGGAGTGATGTGATCAGCACAATTTTGTCTTCAACTCCAGGGGCTATGGTACTGGGGGATTATGTGCTCGAGCCAAATGACCGTGGATTATACAGCGACGAAACTGATTCTGATGATGAATTTGGGGAGGATGATGGTGATTTCTTCGGCTCCATTGGTTTGGGTGGTACTGGCAGCTTTATCAGGTATAATCAGAATCCTTTTGATGTCGATGACTTTGGTTTTCGGAGTGTTGCATCTACAGGTTCTGCTGCTCTTTCTGGACGTGGATTCCACAGGATACTGTTGGAAAGACCTAGAAGACGACGGAGGCATAGGGTACTGAATGCTGGCCGGTAA

Protein sequence

>MS.gene29109.t1

MKNVKRFSKAVEKKDWKGATCSVCMEVPHNAILLLCSSYNKGCRPYMCATSRRYSNCFEQYKKAYTKATSVQSSQQETDYSNFDSNSGDRSDDAKVPELLCPLCRRQVKGWTVVEAARKSLNGKKRSCMQDGCSFAGSYKELRKHVRSKHPCSRPREVDPVREEKWKKFECERERSDVISTILSSTPGAMVLGDYVLEPNDRGLYSDETDSDDEFGEDDGDFFGSIGLGGTGSFIRYNQNPFDVDDFGFRSVASTGSAALSGRGFHRILLERPRRRRRHRVLNAGR